Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000961

Physical Location & Seq

Genomic Coordinates Forward (+)

20147334 .. 20154119

Gene Structure 6786 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00233840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGTGCCAGGCTGGTGTCATGGAGAGTGAGACGACCTTCATGGAAGTATCAGAACAATTGCTGCATGATTCAGATAAGTTTAGAGCCATTCAACCTGTGGAGAGCGATTCAAACCCTGAATGGAAGGACCAGATCACAATGAGAGGGCTGGTGGTGAGCACGATGTTGGGGAGTCTTTTCTGCATCATCATTCACAAGCTCAATCTAACAGCCGGGATCATTCCATCCTTGAATGTTGCTGCGGGGCTGCTAGGTTTCTTTTTCATCCAGTCCTGGACTGGCTTCTTGTCTAAGTTGGGATTTAGGGTTACCCCCTTTACAAGGCAAGAGAACACCGTCATCCAGACCTGTGTCGTTGCTTGCTATACCCTCGCTCATACCGGGGGATTCGGTTCATATCTGATAGCAATGGATGAGAAAACATATGAACTCACTGGAGCCAATCACCCTGGGAATCGGGCACAAGATGTTAAAAATCCAAGCTTGGGGTGGATGACTGTTTTCTTGTTTGTTGTCAGCTTTGTTGGCATCTTTACTCTTGTTCCACTTCGTAAGGTTATGATCATGGATTACAAACTTACATATCCCAGTGGGACAGCCACAGCAATGTTGATAAATAGTCTTCAAACTAAAACTGGCGCAGAGCTTGCCCGGAAGCAAGTACGTTCTCTTGCGAAGTATCTAAGTATAAGTTTTGTTTGGAGCTGTTTTAAGTGGTTCTTTAGTGGTATTGGAGATTCATGTGGGTTTGACAACTTTCCTAGCTTTGGACTAACGCTATTTAAGAACACGTTTTATTTTGACTTCGGTTTAACCTATGTTGGATGTGGTCTTATCTGTCCTCGCATAGTCGTTTGTTCAGTTCTTCTTGGGGGTATCATATCATGGGGTTTACTCTGGCCCTTCATATCCCAACAGGCAGGGGACTGGTATCCAGCAGACCTCGGTAGTAATGATTTTAAAGGTCTTTATGGATACAAGGTCTTTATTGCTATTGCCCTCATTCTTGGGGATGGTCTCTACAATTTAATCAAGATTATAGGCATGACTCTTAAAGAAATTTACAATAATATTAGCAAACGGAGCAACCTTCCTGTTGTTAAAGAGGTACTAAATGGTGAGAGTTCTGAAGAATTGATGGAGCAAAGAAAAAGAGATGAGGTATTTCTCAAGGATAGAATACCAACTTGGCTTGCTGGTTCTGGATATCTCGTCCTAGGGGCATTATCGGTAGCAACATTGCCCATCATCTTTCCCCCTTTCAAATGGTATTTGGTTCTCTTCTCATACATCCTTGCTCCTATCCTTGCCTTCTGCAATTCCTATGGCACTGGCCTCACAGACTGCAGTTTACTTTTTACATATGGGAAAATTGGTCTTTTTGTAATTGCTTCATTAATCGGAAGTGATGGTGGAGTTATAGGCGGTTTAGCATCTTGTGGGGTGATGATGTCCATTATTGGTACAGCAGGCGAACTCATGCAAGACTTCAAGACAGGCTACCTGACTCTGTCCTCACCCAAGTCAATGTTCGTCAGTCAGCTAGTGGGAACAGCCATGGGTTGTGTAATTGCTCCATTAACGTTTTGGTTGTTTTGGACTGCCTTTGACATTGGGGCACCTGATGGCCCATATAAAGCACCGCAGGCTGTGATATTCAGGGAAATGGCGATATTAGGTACTGAAGGCTTCTCTAAGTTCCCGAAGCACTGCTTGGCTTTGTGCAGTGGGTTTTTCATGGCAGCTCTGGTTATAAACCTCCTGAGGGATGTGATTCCCAAGAGAATATCACGATTCATTCCTATTCCAATGGCCATGGCAATTCCATTCTACATCGGAGCATATTTTTCCATAGACTTATTTGTTGGGACAATGATATTGTATATATGGGAGCAAGTGAATAGGAAGGATGCGGAGGATTATGCAGGGGCAGTTGCTTCAGGTCTAATGTGTGGTGATGGGATTTGGACGATTCCATCAGCAATCCTGTCTATTTTTAAGGTGAATCCACCTATCTGTATGTACTTTGGGCCTTCTTTGAGCGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0016020 GO:0022857 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

682

Amino Acids

74.94

Weight (kDa)

7.38

Isoelectric Point (pI)

30.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	44 - 663	2.6e-139	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000961)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27020 AT5G41000 AT5G41000 AT5G41000
fragaria_vesca	FvH4_6g53820
malus_domestica	MD09G1008400.v1.1 MD17G1002400.v1.1
prunus_persica	Prupe.3G197700_v2.0.a1 Prupe.3G308600_v2.0.a1
pyrus_communis	pycom111g00670 pycom17g00700
rosa_chinensis	RchiOBHm_Chr2g0155151 RchiOBHm_Chr2g0175951 RchiOBHm_Chr4g0387931 RchiOBHm_Chr4g0404811 RchiOBHm_Chr6g0247711 RchiOBHm_Chr6g0308411 RchiOBHm_Chr7g0225381
rosa_laevigata	RLG00000001821 RLG00000022368
rosa_multiflora	Rmu_co8150112.1_g000001 Rmu_sc0007419.1_g000008 Rmu_sc0012106.1_g000001 Rmu_sc0018801.1_g000005
rosa_roxburghii	Rroxscaffold_2G00076910 Rroxscaffold_3G00233840 Rroxscaffold_5G00348620 Rroxscaffold_6G00388000 Rroxscaffold_7G00165420
rosa_rugosa	Rorug01G0171700 Rorug02G0588900 Rorug02G0589000 Rorug03G0332100 Rorug03G0332200 Rorug05G0042300 Rorug05G0110200 Rorug07G0229200
rosa_samantha	Rh1AG155500 Rh1CG145800 Rh2AG668100 Rh2BG679600 Rh2CG642400 Rh2DG572100 Rh2DG693100 Rh4AG072500 Rh4AG074300 Rh4BG070600 Rh4CG078900 Rh4DG161200 Rh5AG218500 Rh5BG431200 Rh5BG537600 Rh5CG454500 Rh5CG561600 Rh6AG476100 Rh7AG374200 Rh7BG363900 Rh7CG392400 Rh7DG375100
rosa_wichuraiana	Rw2G054770 Rw3G025300 Rw4G006410 Rw7G031640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1754
AccB1I	GGYRCC	1 cut(s)	1618
AccBSI	CCGCTC	1 cut(s)	2043
AciI	CCGC	5 cut(s)	242, 1425, 1643, 1913, 2043
AclI	AACGTT	1 cut(s)	1583
AclWI	GGATC	1 cut(s)	224
AcoI	YGGCCR	1 cut(s)	1812
AcsI	RAATTY	1 cut(s)	1059
AcuI	CTGAAG	3 cut(s)	1149, 1704, 1923
AfaI	GTAC	5 cut(s)	663, 1110, 1465, 1681, 2024
AfiI	CCNNNNNNNGG	4 cut(s)	321, 485, 767, 1765
AflIII	ACRYGT	1 cut(s)	789
AgsI	TTSAA	6 cut(s)	92, 111, 232, 626, 1264, 1492
AjnI	CCWGG	3 cut(s)	6, 272, 448
AjuI	GAANNNNNNNTTGG	6 cut(s)	1171, 1203, 1514, 1546, 1697, 1729
AluBI	AGCT	8 cut(s)	199, 483, 519, 646, 705, 765, 1543, 1745
AluI	AGCT	8 cut(s)	199, 483, 519, 646, 705, 765, 1543, 1745
Alw21I	GWGCWC	1 cut(s)	161
Alw26I	GTCTC	2 cut(s)	23, 1022
AlwI	GGATC	1 cut(s)	224
AoxI	GGCC	5 cut(s)	899, 1333, 1627, 1812, 2030
ApeKI	GCWGC	4 cut(s)	61, 239, 247, 1742
ApoI	RAATTY	1 cut(s)	1059
AseI	ATTAAT	1 cut(s)	1397
AspA2I	CCTAGG	1 cut(s)	1216
AspLEI	GCGC	1 cut(s)	641
AspS9I	GGNCC	4 cut(s)	127, 900, 1628, 2030
AsuC2I	CCSGG	3 cut(s)	214, 382, 652
AsuHPI	GGTGA	7 cut(s)	166, 437, 1130, 1456, 1509, 1967, 2014
AvaII	GGWCC	1 cut(s)	127
AvrII	CCTAGG	1 cut(s)	1216
AxyI	CCTNAGG	1 cut(s)	1763
BaeGI	GKGCMC	2 cut(s)	463, 1621
BalI	TGGCCA	1 cut(s)	1814
BanI	GGYRCC	1 cut(s)	1618
BbsI	GAAGAC	1 cut(s)	614
Bbv12I	GWGCWC	1 cut(s)	161
BbvI	GCAGC	4 cut(s)	48, 226, 234, 1754
BccI	CCATC	8 cut(s)	232, 1007, 1132, 1253, 1403, 1619, 1952, 1984
BciT130I	CCWGG	3 cut(s)	8, 274, 450
BciVI	GTATCC	2 cut(s)	942, 968
BclI	TGATCA	1 cut(s)	561
BcnI	CCSGG	3 cut(s)	214, 382, 652
BcoDI	GTCTC	2 cut(s)	23, 1022
BfaI	CTAG	4 cut(s)	251, 762, 1217, 1544
BfmI	CTRYAG	1 cut(s)	1345
BfuI	GTATCC	2 cut(s)	942, 968
BisI	GCNGC	4 cut(s)	62, 240, 248, 1743
BlnI	CCTAGG	1 cut(s)	1216
BlsI	GCNGC	4 cut(s)	63, 241, 249, 1744
Bme1390I	CCNGG	6 cut(s)	8, 214, 274, 382, 450, 652
Bme18I	GGWCC	1 cut(s)	127
BmgT120I	GGNCC	4 cut(s)	127, 900, 1628, 2030
BmiI	GGNNCC	2 cut(s)	439, 1620
BmrFI	CCNGG	6 cut(s)	8, 214, 274, 382, 450, 652
BmrI	ACTGGG	1 cut(s)	582
BmsI	GCATC	4 cut(s)	192, 537, 1442, 1900
BmuI	ACTGGG	1 cut(s)	582
BoxI	GACNNNNGTC	1 cut(s)	350
BpiI	GAAGAC	1 cut(s)	614
BpmI	CTGGAG	1 cut(s)	456
BpuEI	CTTGAG	1 cut(s)	1154
BpuMI	CCSGG	3 cut(s)	214, 382, 652
BsaI	GGTCTC	1 cut(s)	1022
BsaJI	CCNNGG	7 cut(s)	381, 448, 449, 943, 1216, 1557, 1815
Bsc4I	CCNNNNNNNGG	4 cut(s)	321, 485, 767, 1765
Bse1I	ACTGG	7 cut(s)	268, 283, 439, 588, 640, 932, 1336
Bse21I	CCTNAGG	1 cut(s)	1763
Bse3DI	GCAATG	3 cut(s)	414, 612, 1238
BseBI	CCWGG	3 cut(s)	8, 274, 450
BseDI	CCNNGG	7 cut(s)	381, 448, 449, 943, 1216, 1557, 1815
BseLI	CCNNNNNNNGG	4 cut(s)	321, 485, 767, 1765
BseMI	GCAATG	3 cut(s)	414, 612, 1238
BseMII	CTCAG	1 cut(s)	1754
BseNI	ACTGG	7 cut(s)	268, 283, 439, 588, 640, 932, 1336
BseSI	GKGCMC	2 cut(s)	463, 1621
BseXI	GCAGC	4 cut(s)	48, 226, 234, 1754
BsgI	GTGCAG	1 cut(s)	1744
BshFI	GGCC	5 cut(s)	901, 1335, 1629, 1814, 2032
BshNI	GGYRCC	1 cut(s)	1618
BsiHKAI	GWGCWC	1 cut(s)	161
BsiSI	CCGG	3 cut(s)	213, 381, 652
BslFI	GGGAC	3 cut(s)	607, 938, 1882
BslI	CCNNNNNNNGG	4 cut(s)	321, 485, 767, 1765
BsmAI	GTCTC	2 cut(s)	23, 1022
BsmBI	CGTCTC	1 cut(s)	23
BsmFI	GGGAC	3 cut(s)	607, 938, 1882
BsnI	GGCC	5 cut(s)	901, 1335, 1629, 1814, 2032
Bso31I	GGTCTC	1 cut(s)	1022
Bsp1286I	GDGCHC	3 cut(s)	161, 463, 1621
Bsp143I	GATC	3 cut(s)	132, 216, 561
Bsp19I	CCATGG	2 cut(s)	1557, 1815
BspACI	CCGC	5 cut(s)	242, 1425, 1643, 1913, 2043
BspANI	GGCC	5 cut(s)	901, 1335, 1629, 1814, 2032
BspCNI	CTCAG	1 cut(s)	1755
BspLI	GGNNCC	2 cut(s)	439, 1620
BspMAI	CTGCAG	1 cut(s)	1349
BspPI	GGATC	1 cut(s)	224
BspT107I	GGYRCC	1 cut(s)	1618
BspTNI	GGTCTC	1 cut(s)	1022
BsrBI	CCGCTC	1 cut(s)	2043
BsrDI	GCAATG	3 cut(s)	414, 612, 1238
BsrI	ACTGG	7 cut(s)	268, 283, 439, 588, 640, 932, 1336
BssECI	CCNNGG	7 cut(s)	381, 448, 449, 943, 1216, 1557, 1815
BssMI	GATC	3 cut(s)	132, 216, 561
BssT1I	CCWWGG	3 cut(s)	1216, 1557, 1815
Bst2UI	CCWGG	3 cut(s)	8, 274, 450
Bst4CI	ACNGT	2 cut(s)	337, 499
Bst6I	CTCTTC	1 cut(s)	1286
BstAPI	GCANNNNNTGC	1 cut(s)	647
BstC8I	GCNNGC	5 cut(s)	361, 648, 1194, 1471, 1647
BstDEI	CTNAG	4 cut(s)	291, 683, 1695, 1763
BstDSI	CCRYGG	2 cut(s)	1557, 1815
BstEII	GGTNACC	1 cut(s)	307
BstENI	CCTNNNNNAGG	1 cut(s)	319
BstHHI	GCGC	1 cut(s)	641
BstKTI	GATC	3 cut(s)	135, 219, 564
BstMAI	GTCTC	2 cut(s)	23, 1022
BstMBI	GATC	3 cut(s)	132, 216, 561
BstMWI	GCNNNNNNNGC	4 cut(s)	525, 647, 1083, 1646
BstNI	CCWGG	3 cut(s)	8, 274, 450
BstPAI	GACNNNNGTC	1 cut(s)	350
BstPI	GGTNACC	1 cut(s)	307
BstSCI	CCNGG	6 cut(s)	6, 212, 272, 380, 448, 650
BstSFI	CTRYAG	1 cut(s)	1345
BstSLI	GKGCMC	2 cut(s)	463, 1621
BstV1I	GCAGC	4 cut(s)	48, 226, 234, 1754
BstV2I	GAAGAC	1 cut(s)	614
Bsu36I	CCTNAGG	1 cut(s)	1763
BsuI	GTATCC	2 cut(s)	942, 968
BsuRI	GGCC	5 cut(s)	901, 1335, 1629, 1814, 2032
BtgI	CCRYGG	2 cut(s)	1557, 1815
BtsI	GCAGTG	2 cut(s)	1708, 1732
BtsIMutI	CAGTG	5 cut(s)	432, 595, 1329, 1708, 1732
Cac8I	GCNNGC	5 cut(s)	361, 648, 1194, 1471, 1647
CfoI	GCGC	1 cut(s)	641
Cfr13I	GGNCC	4 cut(s)	127, 900, 1628, 2030
Csp6I	GTAC	5 cut(s)	662, 1109, 1464, 1680, 2023
CviQI	GTAC	5 cut(s)	662, 1109, 1464, 1680, 2023
DdeI	CTNAG	4 cut(s)	291, 683, 1695, 1763
DpnI	GATC	3 cut(s)	134, 218, 563
DpnII	GATC	3 cut(s)	132, 216, 561
DraI	TTTAAA	1 cut(s)	961
EaeI	YGGCCR	1 cut(s)	1812
Eam1104I	CTCTTC	1 cut(s)	1286
EarI	CTCTTC	1 cut(s)	1286
Eco130I	CCWWGG	3 cut(s)	1216, 1557, 1815
Eco31I	GGTCTC	1 cut(s)	1022
Eco32I	GATATC	1 cut(s)	1208
Eco47I	GGWCC	1 cut(s)	127
Eco57I	CTGAAG	3 cut(s)	1149, 1704, 1923
Eco81I	CCTNAGG	1 cut(s)	1763
Eco91I	GGTNACC	1 cut(s)	307
EcoNI	CCTNNNNNAGG	1 cut(s)	319
EcoO65I	GGTNACC	1 cut(s)	307
EcoRII	CCWGG	3 cut(s)	6, 272, 448
EcoRV	GATATC	1 cut(s)	1208
EcoT14I	CCWWGG	3 cut(s)	1216, 1557, 1815
ErhI	CCWWGG	3 cut(s)	1216, 1557, 1815
Esp3I	CGTCTC	1 cut(s)	23
FalI	AAGNNNNNCTT	4 cut(s)	704, 736, 1697, 1729
FaqI	GGGAC	3 cut(s)	607, 938, 1882
FauI	CCCGC	1 cut(s)	235
FauNDI	CATATG	2 cut(s)	424, 1363
FbaI	TGATCA	1 cut(s)	561
Fnu4HI	GCNGC	4 cut(s)	62, 240, 248, 1743
Fsp4HI	GCNGC	4 cut(s)	62, 240, 248, 1743
FspBI	CTAG	4 cut(s)	251, 762, 1217, 1544
GlaI	GCGC	1 cut(s)	640
GluI	GCNGC	4 cut(s)	62, 240, 248, 1743
GsuI	CTGGAG	1 cut(s)	456
HaeIII	GGCC	5 cut(s)	901, 1335, 1629, 1814, 2032
HapII	CCGG	3 cut(s)	213, 381, 652
HhaI	GCGC	1 cut(s)	641
Hin6I	GCGC	1 cut(s)	639
HinP1I	GCGC	1 cut(s)	639
HindIII	AAGCTT	1 cut(s)	481
HpaII	CCGG	3 cut(s)	213, 381, 652
HphI	GGTGA	7 cut(s)	166, 437, 1130, 1456, 1509, 1967, 2014
Hpy166II	GTNNAC	2 cut(s)	893, 1352
Hpy188I	TCNGA	6 cut(s)	52, 73, 402, 1129, 1403, 1838
Hpy188III	TCNNGA	7 cut(s)	343, 1033, 1203, 1492, 1702, 1762, 1791
Hpy8I	GTNNAC	2 cut(s)	893, 1352
HpyAV	CCTTC	8 cut(s)	46, 118, 913, 1100, 1321, 1679, 1900, 2043
HpyCH4III	ACNGT	2 cut(s)	337, 499
HpyCH4IV	ACGT	3 cut(s)	664, 791, 1583
HpyCH4V	TGCA	7 cut(s)	64, 183, 1317, 1347, 1483, 1725, 1925
HpyF10VI	GCNNNNNNNGC	4 cut(s)	525, 647, 1083, 1646
HpyF3I	CTNAG	4 cut(s)	291, 683, 1695, 1763
HpySE526I	ACGT	3 cut(s)	664, 791, 1583
HspAI	GCGC	1 cut(s)	639
Ksp22I	TGATCA	1 cut(s)	561
Kzo9I	GATC	3 cut(s)	132, 216, 561
LmnI	GCTCC	8 cut(s)	437, 702, 1083, 1141, 1303, 1579, 1838, 1891
Lsp1109I	GCAGC	4 cut(s)	48, 226, 234, 1754
LweI	GCATC	4 cut(s)	192, 537, 1442, 1900
MaeI	CTAG	4 cut(s)	251, 762, 1217, 1544
MaeII	ACGT	3 cut(s)	664, 791, 1583
MaeIII	GTNAC	1 cut(s)	307
MalI	GATC	3 cut(s)	134, 218, 563
MbiI	CCGCTC	1 cut(s)	2043
MboI	GATC	3 cut(s)	132, 216, 561
MboII	GAAGA	4 cut(s)	614, 857, 1142, 1273
MfeI	CAATTG	1 cut(s)	56
MhlI	GDGCHC	3 cut(s)	161, 463, 1621
MlsI	TGGCCA	1 cut(s)	1814
MluCI	AATT	9 cut(s)	56, 1024, 1059, 1133, 1318, 1371, 1386, 1569, 1821
MluNI	TGGCCA	1 cut(s)	1814
MlyI	GAGTC	3 cut(s)	181, 1042, 1501
MmeI	TCCRAC	1 cut(s)	802
Mox20I	TGGCCA	1 cut(s)	1814
MscI	TGGCCA	1 cut(s)	1814
MslI	CAYNNNNRTG	1 cut(s)	605
Msp20I	TGGCCA	1 cut(s)	1814
MspI	CCGG	3 cut(s)	213, 381, 652
MspR9I	CCNGG	6 cut(s)	8, 214, 274, 382, 450, 652
MunI	CAATTG	1 cut(s)	56
MvaI	CCWGG	3 cut(s)	8, 274, 450
MwoI	GCNNNNNNNGC	4 cut(s)	525, 647, 1083, 1646
NciI	CCSGG	3 cut(s)	214, 382, 652
NcoI	CCATGG	2 cut(s)	1557, 1815
NdeI	CATATG	2 cut(s)	424, 1363
NdeII	GATC	3 cut(s)	132, 216, 561
NlaIV	GGNNCC	2 cut(s)	439, 1620
PasI	CCCWGGG	1 cut(s)	449
PfeI	GAWTC	9 cut(s)	68, 107, 387, 454, 737, 1774, 1794, 1972, 2005
PflFI	GACNNNGTC	1 cut(s)	1510
PfoI	TCCNGGA	1 cut(s)	272
PkrI	GCNGC	4 cut(s)	63, 241, 249, 1744
PleI	GAGTC	3 cut(s)	180, 1042, 1501
PpsI	GAGTC	3 cut(s)	180, 1042, 1501
PshAI	GACNNNNGTC	1 cut(s)	350
PshBI	ATTAAT	1 cut(s)	1397
PsiI	TTATAA	1 cut(s)	1754
Psp1406I	AACGTT	1 cut(s)	1583
Psp6I	CCWGG	3 cut(s)	6, 272, 448
PspEI	GGTNACC	1 cut(s)	307
PspGI	CCWGG	3 cut(s)	6, 272, 448
PspN4I	GGNNCC	2 cut(s)	439, 1620
PspPI	GGNCC	4 cut(s)	127, 900, 1628, 2030
PstI	CTGCAG	1 cut(s)	1349
PsyI	GACNNNGTC	1 cut(s)	1510
RsaI	GTAC	5 cut(s)	663, 1110, 1465, 1681, 2024
RsaNI	GTAC	5 cut(s)	662, 1109, 1464, 1680, 2023
RseI	CAYNNNNRTG	1 cut(s)	605
SatI	GCNGC	4 cut(s)	62, 240, 248, 1743
Sau3AI	GATC	3 cut(s)	132, 216, 561
Sau96I	GGNCC	4 cut(s)	127, 900, 1628, 2030
SchI	GAGTC	3 cut(s)	181, 1042, 1501
ScrFI	CCNGG	6 cut(s)	8, 214, 274, 382, 450, 652
SduI	GDGCHC	3 cut(s)	161, 463, 1621
SfaNI	GCATC	4 cut(s)	192, 537, 1442, 1900
SfcI	CTRYAG	1 cut(s)	1345
SinI	GGWCC	1 cut(s)	127
SmiMI	CAYNNNNRTG	1 cut(s)	605
SmlI	CTYRAG	1 cut(s)	1169
SmoI	CTYRAG	1 cut(s)	1169
Sse9I	AATT	9 cut(s)	56, 1024, 1059, 1133, 1318, 1371, 1386, 1569, 1821
SsiI	CCGC	5 cut(s)	242, 1425, 1643, 1913, 2043
SspI	AATATT	1 cut(s)	1072
SspMI	CTAG	4 cut(s)	251, 762, 1217, 1544
StyD4I	CCNGG	6 cut(s)	6, 212, 272, 380, 448, 650
StyI	CCWWGG	3 cut(s)	1216, 1557, 1815
TaaI	ACNGT	2 cut(s)	337, 499
TaiI	ACGT	3 cut(s)	667, 794, 1586
TasI	AATT	9 cut(s)	56, 1024, 1059, 1133, 1318, 1371, 1386, 1569, 1821
TatI	WGTACW	1 cut(s)	2022
TfiI	GAWTC	9 cut(s)	68, 107, 387, 454, 737, 1774, 1794, 1972, 2005
TscAI	CASTG	5 cut(s)	439, 595, 1336, 1715, 1732
TseI	GCWGC	4 cut(s)	61, 239, 247, 1742
TspDTI	ATGAA	9 cut(s)	28, 253, 384, 441, 729, 895, 1383, 1726, 1786
TspGWI	ACGGA	1 cut(s)	1096
TspRI	CASTG	5 cut(s)	439, 595, 1336, 1715, 1732
Tth111I	GACNNNGTC	1 cut(s)	1510
VpaK11BI	GGWCC	1 cut(s)	127
VspI	ATTAAT	1 cut(s)	1397
XagI	CCTNNNNNAGG	1 cut(s)	319
XapI	RAATTY	1 cut(s)	1059
XcmI	CCANNNNNNNNNTGG	4 cut(s)	94, 275, 486, 1584
XmaJI	CCTAGG	1 cut(s)	1216
XspI	CTAG	4 cut(s)	251, 762, 1217, 1544

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.