Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000961

Physical Location & Seq

Genomic Coordinates Forward (+)

38582961 .. 38586551

Gene Structure 3591 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0332100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGAGATTCGTCCAAATGGCTGTAGCAGTTGATCAACATCACGTAATCAAGCCATTAAGCCGATCCCAGATATGCAGATTACAATCCTACACCCATCTTGATTACAGCATATTTCCCCACTCCTTTATAAATACATGCGGAGTTGCTAATATTCACAAAAGCTTTTCCACCCCATGTCTCTCCCAAACTACTGCACTGGAGGACGACTTTGACACTAATCCACGGATTGAGATTGTTGGTGGTAGCAGAATTCCTAGGGTACATGCTCTTGTAGTTGAGGTTGCCATAGCTATGGCTTCCGGTGCTGATCTATTGCCAGTGCCAAGCGGACTAGGGGGGGCCTACTTCTTATGTAGTCGAAATGGTGACAATATTGCTGTAGCTAAGCCCATAGATGAAGAACCCTTAGCCTTCAATAATCCTAAAGGCTTCGGAGGTAGGATGCTGGGCCAACCTGGTTTAAAACGCTCAGTTCGGATTGGTGAATCTGGAATTCGAGAATTAGCAGCTTATCTCCTTGACCATGGTGGATTCGCTGGTGTTCCTCCAACTGCTTTAGTAAAAATTTCTCATGTTGCATTCCGCGTTAATAATAATGCAGCTACAATTTCTGCTACTCCCTACAAGATTGCTTCACTTCAGCGGTTTGTAGATCATGACTTTGATGCAGGAGAGTTGGGTTTCTCTGGCTTCTCAATAGCTTCAGTTCATCACATTGGAATTTTTGATGTAAGAGTCCTAAATCTTGATAGGCACGCAGGTAATATGCTTGTTAAGAAGTATAAGCAGAACAACTATGCAGTTGGTGTGGCTGAGCTTGTGCCTATTGACCATGGGCTTTGCCTTCCTGAGTGGCTTGATGATCCATACTTTGAATGGCTGCACTGGCCTCAAGCTTCAATTCCATTTTCTGAGTCTGAGATTGAGTACATATCCAATCTCAATCCCTCTAAAGATGCGGAGCTTTTACGAACTCAGATTCCTTCTTTACGTGAGGCTGCTATCCGTGTTCTTGTGCTCTGCACCATCTTCCTGAAGCGGGCTACAGCTGCTGGGCTTTGTCTTGCTGATATAGGTGAAATGATGACTCGACAATTCTGCGCTGGCGAAGAAAGATTGAGTACATTAGAAAATCTTTGCTTACAAGTTAAAGCTACAATGTCTGGTACAGATGACAAAAACAGAGAAACAATTGGAGAAGGTGAAATATTTCAACTTCAGAATGATATTAAAGAAAGTTTCGATGAGAATTTTGATCTTCCTCAACTCTTACAGATCTATCCTGGAATGTCAAGGTTTTCATCTGTAGGATCAATTACTGAGTTGACCGATGCATATATCTATCCACCATTTAAGGAAAGCAATCATGGCAATGATGATTCTGATAGTAAGAATATGAAAGGGGCAATTTCTTTCGGAGACATGAGTAAAGATGAATGGGATTTGTTCTTGGACAATTTTGAGAAGCTTTTGCCCGACATCCTCCTCAAGGGCACAAATTACTTGAGCTTGAAGAAAAGGTTGAGAACTTCCTGCAAGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0016020 GO:0022857 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

514

Amino Acids

56.92

Weight (kDa)

5.63

Isoelectric Point (pI)

39.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PI3_PI4_kinase	PF00454	125 - 357	7e-42	Phosphatidylinositol 3- and 4-kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000961)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27020 AT5G41000 AT5G41000 AT5G41000
fragaria_vesca	FvH4_6g53820
malus_domestica	MD09G1008400.v1.1 MD17G1002400.v1.1
prunus_persica	Prupe.3G197700_v2.0.a1 Prupe.3G308600_v2.0.a1
pyrus_communis	pycom111g00670 pycom17g00700
rosa_chinensis	RchiOBHm_Chr2g0155151 RchiOBHm_Chr2g0175951 RchiOBHm_Chr4g0387931 RchiOBHm_Chr4g0404811 RchiOBHm_Chr6g0247711 RchiOBHm_Chr6g0308411 RchiOBHm_Chr7g0225381
rosa_laevigata	RLG00000001821 RLG00000022368
rosa_multiflora	Rmu_co8150112.1_g000001 Rmu_sc0007419.1_g000008 Rmu_sc0012106.1_g000001 Rmu_sc0018801.1_g000005
rosa_roxburghii	Rroxscaffold_2G00076910 Rroxscaffold_3G00233840 Rroxscaffold_5G00348620 Rroxscaffold_6G00388000 Rroxscaffold_7G00165420
rosa_rugosa	Rorug01G0171700 Rorug02G0588900 Rorug02G0589000 Rorug03G0332100 Rorug03G0332200 Rorug05G0042300 Rorug05G0110200 Rorug07G0229200
rosa_samantha	Rh1AG155500 Rh1CG145800 Rh2AG668100 Rh2BG679600 Rh2CG642400 Rh2DG572100 Rh2DG693100 Rh4AG072500 Rh4AG074300 Rh4BG070600 Rh4CG078900 Rh4DG161200 Rh5AG218500 Rh5BG431200 Rh5BG537600 Rh5CG454500 Rh5CG561600 Rh6AG476100 Rh7AG374200 Rh7BG363900 Rh7CG392400 Rh7DG375100
rosa_wichuraiana	Rw2G054770 Rw3G025300 Rw4G006410 Rw7G031640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	128
Acc36I	ACCTGC	1 cut(s)	749
AccII	CGCG	1 cut(s)	585
AciI	CCGC	6 cut(s)	138, 327, 583, 643, 959, 1039
AclWI	GGATC	3 cut(s)	57, 857, 1318
AcsI	RAATTY	5 cut(s)	249, 492, 564, 720, 1249
AcuI	CTGAAG	4 cut(s)	623, 687, 1055, 1202
AfaI	GTAC	4 cut(s)	261, 929, 1123, 1168
AfiI	CCNNNNNNNGG	2 cut(s)	1039, 1489
AgsI	TTSAA	5 cut(s)	415, 875, 900, 1214, 1513
AjnI	CCWGG	2 cut(s)	454, 1282
AloI	GAACNNNNNNTCC	2 cut(s)	964, 996
Alw21I	GWGCWC	1 cut(s)	1020
Alw26I	GTCTC	2 cut(s)	182, 1413
AlwI	GGATC	3 cut(s)	57, 857, 1318
AlwNI	CAGNNNCTG	1 cut(s)	1052
AoxI	GGCC	3 cut(s)	339, 448, 887
ApeKI	GCWGC	5 cut(s)	506, 599, 880, 998, 1049
ApoI	RAATTY	5 cut(s)	249, 492, 564, 720, 1249
Asp700I	GAANNNNTTC	1 cut(s)	1209
AspA2I	CCTAGG	1 cut(s)	254
AspLEI	GCGC	1 cut(s)	1103
AspS9I	GGNCC	2 cut(s)	339, 448
AsuHPI	GGTGA	4 cut(s)	377, 494, 1088, 1214
AvrII	CCTAGG	1 cut(s)	254
BaeGI	GKGCMC	1 cut(s)	1496
Bbv12I	GWGCWC	1 cut(s)	1020
BbvI	GCAGC	5 cut(s)	518, 611, 867, 985, 1036
BccI	CCATC	2 cut(s)	102, 1034
BcgI	CGANNNNNNTGC	2 cut(s)	1080, 1114
BciT130I	CCWGG	2 cut(s)	456, 1284
BclI	TGATCA	1 cut(s)	31
BcoDI	GTCTC	2 cut(s)	182, 1413
BfaI	CTAG	2 cut(s)	255, 332
BfmI	CTRYAG	4 cut(s)	21, 378, 1044, 1305
BfuAI	ACCTGC	1 cut(s)	749
BglII	AGATCT	1 cut(s)	1275
BisI	GCNGC	5 cut(s)	507, 600, 881, 999, 1050
BlnI	CCTAGG	1 cut(s)	254
BlpI	GCTNAGC	2 cut(s)	384, 813
BlsI	GCNGC	5 cut(s)	508, 601, 882, 1000, 1051
Bme1390I	CCNGG	2 cut(s)	456, 1284
BmgT120I	GGNCC	2 cut(s)	339, 448
BmiI	GGNNCC	1 cut(s)	340
BmrFI	CCNGG	2 cut(s)	456, 1284
BmsI	GCATC	4 cut(s)	432, 655, 946, 1321
BpmI	CTGGAG	1 cut(s)	218
Bpu10I	CCTNAGC	1 cut(s)	406
Bpu1102I	GCTNAGC	2 cut(s)	384, 813
BpuEI	CTTGAG	3 cut(s)	876, 1472, 1525
BsaAI	YACGTR	2 cut(s)	43, 992
BsaBI	GATNNNNATC	2 cut(s)	36, 82
BsaJI	CCNNGG	4 cut(s)	221, 254, 523, 832
BsaWI	WCCGGW	1 cut(s)	299
Bsc4I	CCNNNNNNNGG	2 cut(s)	1039, 1489
Bse1I	ACTGG	3 cut(s)	201, 317, 890
Bse3DI	GCAATG	1 cut(s)	1378
Bse8I	GATNNNNATC	2 cut(s)	36, 82
BseBI	CCWGG	2 cut(s)	456, 1284
BseDI	CCNNGG	4 cut(s)	221, 254, 523, 832
BseGI	GGATG	2 cut(s)	447, 1479
BseJI	GATNNNNATC	2 cut(s)	36, 82
BseLI	CCNNNNNNNGG	2 cut(s)	1039, 1489
BseMI	GCAATG	1 cut(s)	1378
BseMII	CTCAG	7 cut(s)	483, 804, 840, 903, 909, 989, 1311
BseNI	ACTGG	3 cut(s)	201, 317, 890
BseRI	GAGGAG	1 cut(s)	1475
BseSI	GKGCMC	1 cut(s)	1496
BseXI	GCAGC	5 cut(s)	518, 611, 867, 985, 1036
BseYI	CCCAGC	2 cut(s)	445, 1052
BsgI	GTGCAG	3 cut(s)	177, 866, 1006
Bsh1236I	CGCG	1 cut(s)	585
BshFI	GGCC	3 cut(s)	341, 450, 889
BsiHKAI	GWGCWC	1 cut(s)	1020
BsiSI	CCGG	1 cut(s)	300
BslI	CCNNNNNNNGG	2 cut(s)	1039, 1489
BsmAI	GTCTC	2 cut(s)	182, 1413
BsmI	GAATGC	1 cut(s)	578
BsnI	GGCC	3 cut(s)	341, 450, 889
Bsp1286I	GDGCHC	2 cut(s)	1020, 1496
Bsp143I	GATC	8 cut(s)	31, 62, 307, 652, 862, 1255, 1275, 1310
Bsp1720I	GCTNAGC	2 cut(s)	384, 813
Bsp19I	CCATGG	2 cut(s)	523, 832
BspACI	CCGC	6 cut(s)	138, 327, 583, 643, 959, 1039
BspANI	GGCC	3 cut(s)	341, 450, 889
BspCNI	CTCAG	7 cut(s)	482, 805, 841, 904, 910, 988, 1312
BspFNI	CGCG	1 cut(s)	585
BspHI	TCATGA	1 cut(s)	655
BspLI	GGNNCC	1 cut(s)	340
BspMI	ACCTGC	1 cut(s)	749
BspPI	GGATC	3 cut(s)	57, 857, 1318
BsrDI	GCAATG	1 cut(s)	1378
BsrI	ACTGG	3 cut(s)	201, 317, 890
BssECI	CCNNGG	4 cut(s)	221, 254, 523, 832
BssMI	GATC	8 cut(s)	31, 62, 307, 652, 862, 1255, 1275, 1310
BssT1I	CCWWGG	3 cut(s)	254, 523, 832
Bst2UI	CCWGG	2 cut(s)	456, 1284
BstBAI	YACGTR	2 cut(s)	43, 992
BstC8I	GCNNGC	3 cut(s)	756, 1041, 1105
BstDEI	CTNAG	9 cut(s)	384, 406, 469, 813, 849, 912, 918, 975, 1320
BstDSI	CCRYGG	3 cut(s)	221, 523, 832
BstENI	CCTNNNNNAGG	1 cut(s)	1487
BstF5I	GGATG	2 cut(s)	447, 1479
BstFNI	CGCG	1 cut(s)	585
BstHHI	GCGC	1 cut(s)	1103
BstKTI	GATC	8 cut(s)	34, 65, 310, 655, 865, 1258, 1278, 1313
BstMAI	GTCTC	2 cut(s)	182, 1413
BstMBI	GATC	8 cut(s)	31, 62, 307, 652, 862, 1255, 1275, 1310
BstMWI	GCNNNNNNNGC	4 cut(s)	302, 886, 1049, 1368
BstNI	CCWGG	2 cut(s)	456, 1284
BstNSI	RCATGY	2 cut(s)	138, 266
BstSCI	CCNGG	2 cut(s)	454, 1282
BstSFI	CTRYAG	4 cut(s)	21, 378, 1044, 1305
BstSLI	GKGCMC	1 cut(s)	1496
BstUI	CGCG	1 cut(s)	585
BstV1I	GCAGC	5 cut(s)	518, 611, 867, 985, 1036
BstX2I	RGATCY	1 cut(s)	1275
BstXI	CCANNNNNNTGG	1 cut(s)	292
BstYI	RGATCY	1 cut(s)	1275
BsuRI	GGCC	3 cut(s)	341, 450, 889
BtgI	CCRYGG	3 cut(s)	221, 523, 832
BtsCI	GGATG	2 cut(s)	447, 1479
BtsIMutI	CAGTG	3 cut(s)	194, 324, 883
BveI	ACCTGC	1 cut(s)	749
Cac8I	GCNNGC	3 cut(s)	756, 1041, 1105
CaiI	CAGNNNCTG	1 cut(s)	1052
CciI	TCATGA	1 cut(s)	655
CfoI	GCGC	1 cut(s)	1103
Cfr13I	GGNCC	2 cut(s)	339, 448
CsiI	ACCWGGT	1 cut(s)	454
Csp6I	GTAC	4 cut(s)	260, 928, 1122, 1167
CviAII	CATG	9 cut(s)	135, 174, 263, 524, 572, 656, 833, 1367, 1423
CviQI	GTAC	4 cut(s)	260, 928, 1122, 1167
DdeI	CTNAG	9 cut(s)	384, 406, 469, 813, 849, 912, 918, 975, 1320
DpnI	GATC	8 cut(s)	33, 64, 309, 654, 864, 1257, 1277, 1312
DpnII	GATC	8 cut(s)	31, 62, 307, 652, 862, 1255, 1275, 1310
DraI	TTTAAA	1 cut(s)	462
Eco130I	CCWWGG	3 cut(s)	254, 523, 832
Eco57I	CTGAAG	4 cut(s)	623, 687, 1055, 1202
EcoNI	CCTNNNNNAGG	1 cut(s)	1487
EcoO109I	RGGNCCY	1 cut(s)	339
EcoRI	GAATTC	2 cut(s)	249, 492
EcoRII	CCWGG	2 cut(s)	454, 1282
EcoT14I	CCWWGG	3 cut(s)	254, 523, 832
EcoT22I	ATGCAT	1 cut(s)	1336
ErhI	CCWWGG	3 cut(s)	254, 523, 832
FaeI	CATG	9 cut(s)	138, 177, 266, 527, 575, 659, 836, 1370, 1426
FatI	CATG	9 cut(s)	134, 173, 262, 523, 571, 655, 832, 1366, 1422
FauI	CCCGC	1 cut(s)	1032
FbaI	TGATCA	1 cut(s)	31
Fnu4HI	GCNGC	5 cut(s)	507, 600, 881, 999, 1050
FokI	GGATG	2 cut(s)	454, 1466
Fsp4HI	GCNGC	5 cut(s)	507, 600, 881, 999, 1050
FspBI	CTAG	2 cut(s)	255, 332
GlaI	GCGC	1 cut(s)	1102
GluI	GCNGC	5 cut(s)	507, 600, 881, 999, 1050
GsaI	CCCAGC	2 cut(s)	449, 1056
GsuI	CTGGAG	1 cut(s)	218
HaeIII	GGCC	3 cut(s)	341, 450, 889
HapII	CCGG	1 cut(s)	300
HhaI	GCGC	1 cut(s)	1103
Hin1II	CATG	9 cut(s)	138, 177, 266, 527, 575, 659, 836, 1370, 1426
Hin6I	GCGC	1 cut(s)	1101
HinP1I	GCGC	1 cut(s)	1101
HincII	GTYRAC	1 cut(s)	1326
HindII	GTYRAC	1 cut(s)	1326
HindIII	AAGCTT	3 cut(s)	160, 894, 1466
HinfI	GANTC	8 cut(s)	6, 485, 531, 735, 914, 979, 1087, 1379
HpaII	CCGG	1 cut(s)	300
HphI	GGTGA	4 cut(s)	377, 494, 1088, 1214
Hpy166II	GTNNAC	1 cut(s)	1326
Hpy188I	TCNGA	8 cut(s)	434, 477, 913, 919, 978, 1221, 1384, 1418
Hpy188III	TCNNGA	7 cut(s)	98, 489, 497, 656, 746, 848, 1033
Hpy8I	GTNNAC	1 cut(s)	1326
HpyAV	CCTTC	4 cut(s)	421, 854, 993, 1193
HpyCH4IV	ACGT	2 cut(s)	42, 991
HpyF10VI	GCNNNNNNNGC	4 cut(s)	302, 886, 1049, 1368
HpyF3I	CTNAG	9 cut(s)	384, 406, 469, 813, 849, 912, 918, 975, 1320
HpySE526I	ACGT	2 cut(s)	42, 991
Hsp92II	CATG	9 cut(s)	138, 177, 266, 527, 575, 659, 836, 1370, 1426
HspAI	GCGC	1 cut(s)	1101
Ksp22I	TGATCA	1 cut(s)	31
Kzo9I	GATC	8 cut(s)	31, 62, 307, 652, 862, 1255, 1275, 1310
LmnI	GCTCC	1 cut(s)	961
Lsp1109I	GCAGC	5 cut(s)	518, 611, 867, 985, 1036
LweI	GCATC	4 cut(s)	432, 655, 946, 1321
MabI	ACCWGGT	1 cut(s)	454
MaeI	CTAG	2 cut(s)	255, 332
MaeII	ACGT	2 cut(s)	42, 991
MaeIII	GTNAC	1 cut(s)	365
MalI	GATC	8 cut(s)	33, 64, 309, 654, 864, 1257, 1277, 1312
MboI	GATC	8 cut(s)	31, 62, 307, 652, 862, 1255, 1275, 1310
MboII	GAAGA	5 cut(s)	410, 1021, 1121, 1250, 1525
MfeI	CAATTG	1 cut(s)	1191
MflI	RGATCY	1 cut(s)	1275
MhlI	GDGCHC	2 cut(s)	1020, 1496
MlyI	GAGTC	3 cut(s)	744, 923, 1081
MmeI	TCCRAC	1 cut(s)	572
Mph1103I	ATGCAT	1 cut(s)	1336
MroXI	GAANNNNTTC	1 cut(s)	1209
MseI	TTAA	8 cut(s)	56, 461, 588, 774, 1149, 1230, 1353, 1543
MslI	CAYNNNNRTG	2 cut(s)	290, 1371
MspA1I	CMGCKG	2 cut(s)	643, 1049
MspI	CCGG	1 cut(s)	300
MspR9I	CCNGG	2 cut(s)	456, 1284
MunI	CAATTG	1 cut(s)	1191
Mva1269I	GAATGC	1 cut(s)	578
MvaI	CCWGG	2 cut(s)	456, 1284
MvnI	CGCG	1 cut(s)	585
MwoI	GCNNNNNNNGC	4 cut(s)	302, 886, 1049, 1368
NcoI	CCATGG	2 cut(s)	523, 832
NdeII	GATC	8 cut(s)	31, 62, 307, 652, 862, 1255, 1275, 1310
NlaIII	CATG	9 cut(s)	138, 177, 266, 527, 575, 659, 836, 1370, 1426
NlaIV	GGNNCC	1 cut(s)	340
NmuCI	GTSAC	1 cut(s)	365
NsiI	ATGCAT	1 cut(s)	1336
NspI	RCATGY	2 cut(s)	138, 266
PagI	TCATGA	1 cut(s)	655
PctI	GAATGC	1 cut(s)	578
PdmI	GAANNNNTTC	1 cut(s)	1209
PfeI	GAWTC	5 cut(s)	6, 485, 531, 979, 1379
PfoI	TCCNGGA	1 cut(s)	1282
PkrI	GCNGC	5 cut(s)	508, 601, 882, 1000, 1051
PleI	GAGTC	3 cut(s)	743, 922, 1081
PpsI	GAGTC	3 cut(s)	743, 922, 1081
Ppu21I	YACGTR	2 cut(s)	43, 992
PsiI	TTATAA	1 cut(s)	128
Psp6I	CCWGG	2 cut(s)	454, 1282
PspFI	CCCAGC	2 cut(s)	445, 1052
PspGI	CCWGG	2 cut(s)	454, 1282
PspN4I	GGNNCC	1 cut(s)	340
PspPI	GGNCC	2 cut(s)	339, 448
PstNI	CAGNNNCTG	1 cut(s)	1052
PsuI	RGATCY	1 cut(s)	1275
PvuII	CAGCTG	1 cut(s)	1049
RsaI	GTAC	4 cut(s)	261, 929, 1123, 1168
RsaNI	GTAC	4 cut(s)	260, 928, 1122, 1167
RseI	CAYNNNNRTG	2 cut(s)	290, 1371
SaqAI	TTAA	8 cut(s)	56, 461, 588, 774, 1149, 1230, 1353, 1543
SatI	GCNGC	5 cut(s)	507, 600, 881, 999, 1050
Sau3AI	GATC	8 cut(s)	31, 62, 307, 652, 862, 1255, 1275, 1310
Sau96I	GGNCC	2 cut(s)	339, 448
SchI	GAGTC	3 cut(s)	744, 923, 1081
ScrFI	CCNGG	2 cut(s)	456, 1284
SduI	GDGCHC	2 cut(s)	1020, 1496
SexAI	ACCWGGT	1 cut(s)	454
SfaNI	GCATC	4 cut(s)	432, 655, 946, 1321
SfcI	CTRYAG	4 cut(s)	21, 378, 1044, 1305
SmiMI	CAYNNNNRTG	2 cut(s)	290, 1371
SmlI	CTYRAG	3 cut(s)	891, 1487, 1504
SmoI	CTYRAG	3 cut(s)	891, 1487, 1504
SsiI	CCGC	6 cut(s)	138, 327, 583, 643, 959, 1039
SspI	AATATT	3 cut(s)	151, 373, 1209
SspMI	CTAG	2 cut(s)	255, 332
StyD4I	CCNGG	2 cut(s)	454, 1282
StyI	CCWWGG	3 cut(s)	254, 523, 832
TaiI	ACGT	2 cut(s)	45, 994
TaqI	TCGA	4 cut(s)	358, 496, 1090, 1242
TaqII	GACCGA	1 cut(s)	1343
TatI	WGTACW	2 cut(s)	927, 1121
TfiI	GAWTC	5 cut(s)	6, 485, 531, 979, 1379
Tru1I	TTAA	8 cut(s)	56, 461, 588, 774, 1149, 1230, 1353, 1543
Tru9I	TTAA	8 cut(s)	56, 461, 588, 774, 1149, 1230, 1353, 1543
TscAI	CASTG	3 cut(s)	201, 324, 890
TseFI	GTSAC	1 cut(s)	365
TseI	GCWGC	5 cut(s)	506, 599, 880, 998, 1049
Tsp45I	GTSAC	1 cut(s)	365
TspDTI	ATGAA	5 cut(s)	411, 698, 1290, 1412, 1449
TspGWI	ACGGA	2 cut(s)	238, 995
TspRI	CASTG	3 cut(s)	201, 324, 890
XagI	CCTNNNNNAGG	1 cut(s)	1487
XapI	RAATTY	5 cut(s)	249, 492, 564, 720, 1249
XceI	RCATGY	2 cut(s)	138, 266
XcmI	CCANNNNNNNNNTGG	1 cut(s)	873
XmaJI	CCTAGG	1 cut(s)	254
XmnI	GAANNNNTTC	1 cut(s)	1209
XspI	CTAG	2 cut(s)	255, 332
Zsp2I	ATGCAT	1 cut(s)	1336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.