Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000961

Physical Location & Seq

Genomic Coordinates Forward (+)

82877062 .. 82880576

Gene Structure 3515 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000022368

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGGGGACCGAGACGACCTCCGTGGAGATATCCGAGCCGTTGCTTGTTGACGATTCATACAAAATCAAGGCCGTTCAGGAGGACCGAGTGCCGGAATGGAAGGAGCAGATCACGGTGAGGGGGCTGCTGGTGAGCGCCGTGCTGGGGACGCTGTTCTGCATCATCACACACAAGCTGAATCTGACGGTGGGGATCATCCCGTCCTTGAATGTGGCCGCCGGTCTGCTCGGGTTCTTCTTCGTCAAGTCCTGGACCGGGTTCTTGGCCCAATTTGGGTTTCAGGTGAAGCCCTTCACCAGGCAAGAGAACACTGTCATCCAAACTTGCGTCGTCGCTTGCTATGGCCTCGCCTTTAGCGGGGGATTCGGTTCGTATTTGGTTGCAATGGATGAGAGAACATATAAACTTATCGGGGAGGATTACCCTGGTAACAGGGCAGAAGATGTTATTAATCCGAGCTTGTGGTGGATGACTGCTTTCCTCGTTGTTGTCAGCTTCCTTGGACTTTTTAGTCTTGTTCCGCTTCGCAAGGTTATGGTTATGGATTACAAACTTACATACCCCAGTGGGACTGCCACAGCAATGTTGATCAATAGCTTTCACACTAAAAGTGGTGCAGAGCTTGCCGGGAAGCAAGTGCAATGTCTTGGAAAGTATCTAAGCATGAGTTTAATTTGGAGCTGCTTTAAGTGGTTCTTCAGTGGTATTGGAGATTCATGTGGGTTTGACAACTTTCCTAGCCTTGGATTGACACTTTTTAAGAACACGTTTTATTTCGACTTCAGTCCTACTTATGTCGGATGTGGTCTTATTTGCCCTCACATAGTCAACTGCTCCGTACTTCTTGGGGCTATCATATCATGGGGTTTCCTTTGGCCTCTCATATCCCAACATGCTGGGCACTGGTATCCAGCTGAGCTTGGTAGCAATGATTTCAAAGGTCTTTATGGATATAAGGTCTTCATAGCTATTGCCCTTATTTTGGGGGATGGTCTATACAATTTGATCAAGATTATAGCCATTACTATCAAGGAAATATGCAATAAAAGTAGTAAACAGAGCAATCTTCCTTTGGTTAAAGAAAAGTTGGATGGTGAGAGTTCTGAAGTAACCCTGGAACAAAAAAAGAGGGATGAGGTATTTCTCAAGGATAGAATACCAAACTGGGCTGCCGGTTCTGGATATGTGGCCCTGGTGGCAATATCGACAGTAACAATGCCAATTATCTTTCCGCCTCTCAAATGGTATTTGGTGCTGTGCTCATACATCCTTGCTCCTGCTCTTGCCTTTTGCAACTCCTATGGCACTGGCCTCACAGACTGGAGTTTAGCTTCAACTTATGGGAAAATAGGTCTTTTCATCATTGCTTCATTAGTGGGAAGTGATGGTGGGGTTATAGCTGGTTTAGCTGCTTGTGGGGTGATGATGTCCATTGTCTCTACCGCAGCCGATCTCATGCAAGACTTCAAGACAGGTTACCTCACCATGTCCTCAGCCAAGTCTATGTTTATCAGCCAGTTAGTGGGAACAGCCATGGGTTGTGTGATAGCTCCATTAACATTTTGGTTGTTTTGGACTGCTTTTGATATTGGCTCACCTGATGGTCCGTACAAAGCACCATATGCTGTAATATTCAGGGAAATGGCAATTTTAGGTATTGAAGGCTTCTCCGAGCTGCCAAAGCACTGCTTGGCTATGTGTTGTGGTTTCTTTGTGGCTGCTTTGGTGATAAACCTCTTGAGGGATATGACTCCTAAGAAGGTATCCCAATATATTCCTATTCCAATGGCTATGGCAGTCCCATTCTACATTGGAGCCTACTTTGCCATTGATATGTTTGTCGGGACAGTGATATTGTTTATATGGGAGCGAGTAAATAGGCAGAATTCGGAGGATTTTGCAGGGGCAGTCGCTTCGGGTCTAATATGCGGTGATGGGATTTGGACAATTCCATCCGCGATCCTCTCTATCTTCAAGGTCAATCCACCCATCTGCATGTACTTTGGGCCTTCTTTGAGCAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0016020 GO:0022857 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

675

Amino Acids

73.73

Weight (kDa)

6.34

Isoelectric Point (pI)

30.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	36 - 655	3.8e-147	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000961)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27020 AT5G41000 AT5G41000 AT5G41000
fragaria_vesca	FvH4_6g53820
malus_domestica	MD09G1008400.v1.1 MD17G1002400.v1.1
prunus_persica	Prupe.3G197700_v2.0.a1 Prupe.3G308600_v2.0.a1
pyrus_communis	pycom111g00670 pycom17g00700
rosa_chinensis	RchiOBHm_Chr2g0155151 RchiOBHm_Chr2g0175951 RchiOBHm_Chr4g0387931 RchiOBHm_Chr4g0404811 RchiOBHm_Chr6g0247711 RchiOBHm_Chr6g0308411 RchiOBHm_Chr7g0225381
rosa_laevigata	RLG00000001821 RLG00000022368
rosa_multiflora	Rmu_co8150112.1_g000001 Rmu_sc0007419.1_g000008 Rmu_sc0012106.1_g000001 Rmu_sc0018801.1_g000005
rosa_roxburghii	Rroxscaffold_2G00076910 Rroxscaffold_3G00233840 Rroxscaffold_5G00348620 Rroxscaffold_6G00388000 Rroxscaffold_7G00165420
rosa_rugosa	Rorug01G0171700 Rorug02G0588900 Rorug02G0589000 Rorug03G0332100 Rorug03G0332200 Rorug05G0042300 Rorug05G0110200 Rorug07G0229200
rosa_samantha	Rh1AG155500 Rh1CG145800 Rh2AG668100 Rh2BG679600 Rh2CG642400 Rh2DG572100 Rh2DG693100 Rh4AG072500 Rh4AG074300 Rh4BG070600 Rh4CG078900 Rh4DG161200 Rh5AG218500 Rh5BG431200 Rh5BG537600 Rh5CG454500 Rh5CG561600 Rh6AG476100 Rh7AG374200 Rh7BG363900 Rh7CG392400 Rh7DG375100
rosa_wichuraiana	Rw2G054770 Rw3G025300 Rw4G006410 Rw7G031640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	510
AccB7I	CCANNNNNTGG	1 cut(s)	1522
AccII	CGCG	1 cut(s)	1958
AciI	CCGC	7 cut(s)	216, 357, 521, 1232, 1443, 1929, 1956
AclWI	GGATC	2 cut(s)	200, 1954
AcoI	YGGCCR	1 cut(s)	213
AcsI	RAATTY	1 cut(s)	1885
AcuI	CTGAAG	3 cut(s)	682, 766, 1125
AfaI	GTAC	3 cut(s)	840, 1610, 2000
AflIII	ACRYGT	1 cut(s)	765
AgsI	TTSAA	6 cut(s)	208, 937, 1335, 1468, 1661, 1975
AjnI	CCWGG	5 cut(s)	248, 296, 424, 1113, 1191
AjuI	GAANNNNNNNTTGG	2 cut(s)	261, 293
Alw21I	GWGCWC	1 cut(s)	1262
Alw26I	GTCTC	2 cut(s)	5, 1441
AlwI	GGATC	2 cut(s)	200, 1954
Ama87I	CYCGRG	1 cut(s)	227
AoxI	GGCC	8 cut(s)	69, 213, 264, 343, 875, 1188, 1309, 2006
ApeKI	GCWGC	8 cut(s)	124, 681, 1169, 1409, 1445, 1675, 1718, 2019
ApoI	RAATTY	1 cut(s)	1885
AseI	ATTAAT	1 cut(s)	450
Asp700I	GAANNNNTTC	1 cut(s)	290
AspLEI	GCGC	1 cut(s)	137
AspS9I	GGNCC	7 cut(s)	6, 82, 252, 265, 1189, 1604, 2006
AsuC2I	CCSGG	2 cut(s)	256, 628
AvaI	CYCGRG	1 cut(s)	227
AvaII	GGWCC	4 cut(s)	6, 82, 252, 1604
BaeGI	GKGCMC	1 cut(s)	903
BbsI	GAAGAC	1 cut(s)	952
Bbv12I	GWGCWC	1 cut(s)	1262
BbvCI	CCTCAGC	1 cut(s)	1492
BbvI	GCAGC	7 cut(s)	111, 668, 1156, 1396, 1457, 1662, 1705
BccI	CCATC	7 cut(s)	983, 1085, 1379, 1595, 1928, 1960, 1997
BceAI	ACGGC	3 cut(s)	22, 56, 122
BcgI	CGANNNNNNTGC	2 cut(s)	1896, 1930
BciT130I	CCWGG	5 cut(s)	250, 298, 426, 1115, 1193
BciVI	GTATCC	2 cut(s)	918, 1774
BclI	TGATCA	2 cut(s)	588, 1005
BcnI	CCSGG	2 cut(s)	256, 628
BcoDI	GTCTC	2 cut(s)	5, 1441
BfaI	CTAG	2 cut(s)	738, 2023
BfoI	RGCGCY	1 cut(s)	138
BfuI	GTATCC	2 cut(s)	918, 1774
BglI	GCCNNNNNGGC	1 cut(s)	1196
BisI	GCNGC	9 cut(s)	125, 216, 682, 1170, 1410, 1446, 1676, 1719, 2020
BlpI	GCTNAGC	1 cut(s)	915
BlsI	GCNGC	9 cut(s)	126, 217, 683, 1171, 1411, 1447, 1677, 1720, 2021
Bme1390I	CCNGG	7 cut(s)	250, 256, 298, 426, 628, 1115, 1193
Bme18I	GGWCC	4 cut(s)	6, 82, 252, 1604
BmeT110I	CYCGRG	1 cut(s)	227
BmgT120I	GGNCC	7 cut(s)	6, 82, 252, 265, 1189, 1604, 2006
BmiI	GGNNCC	2 cut(s)	7, 1816
BmrFI	CCNGG	7 cut(s)	250, 256, 298, 426, 628, 1115, 1193
BmrI	ACTGGG	2 cut(s)	558, 1174
BmsI	GCATC	1 cut(s)	168
BmuI	ACTGGG	2 cut(s)	558, 1174
BoxI	GACNNNNGTC	1 cut(s)	783
BpiI	GAAGAC	1 cut(s)	952
BplI	GAGNNNNNCTC	1 cut(s)	34
BpmI	CTGGAG	1 cut(s)	1342
Bpu10I	CCTNAGC	1 cut(s)	1492
Bpu1102I	GCTNAGC	1 cut(s)	915
BpuEI	CTTGAG	2 cut(s)	1130, 1759
BpuMI	CCSGG	2 cut(s)	256, 628
BsaJI	CCNNGG	7 cut(s)	21, 424, 499, 742, 1113, 1191, 1533
Bse118I	RCCGGY	2 cut(s)	218, 1172
Bse1I	ACTGG	6 cut(s)	564, 908, 1169, 1312, 1325, 1516
Bse3DI	GCAATG	5 cut(s)	390, 588, 647, 934, 1362
BseBI	CCWGG	5 cut(s)	250, 298, 426, 1115, 1193
BseDI	CCNNGG	7 cut(s)	21, 424, 499, 742, 1113, 1191, 1533
BseMI	GCAATG	5 cut(s)	390, 588, 647, 934, 1362
BseMII	CTCAG	2 cut(s)	906, 1506
BseNI	ACTGG	6 cut(s)	564, 908, 1169, 1312, 1325, 1516
BseSI	GKGCMC	1 cut(s)	903
BseXI	GCAGC	7 cut(s)	111, 668, 1156, 1396, 1457, 1662, 1705
BseYI	CCCAGC	2 cut(s)	142, 896
BsgI	GTGCAG	1 cut(s)	636
Bsh1236I	CGCG	1 cut(s)	1958
BshFI	GGCC	8 cut(s)	71, 215, 266, 345, 877, 1190, 1311, 2008
BsiHKAI	GWGCWC	1 cut(s)	1262
BsiHKCI	CYCGRG	1 cut(s)	227
BsiSI	CCGG	5 cut(s)	92, 219, 255, 627, 1173
BslFI	GGGAC	5 cut(s)	19, 160, 583, 1784, 1858
BsmAI	GTCTC	2 cut(s)	5, 1441
BsmBI	CGTCTC	1 cut(s)	5
BsmFI	GGGAC	5 cut(s)	19, 160, 583, 1784, 1858
BsnI	GGCC	8 cut(s)	71, 215, 266, 345, 877, 1190, 1311, 2008
BsoBI	CYCGRG	1 cut(s)	227
Bsp1286I	GDGCHC	2 cut(s)	903, 1262
Bsp143I	GATC	6 cut(s)	108, 192, 588, 1005, 1450, 1959
Bsp1720I	GCTNAGC	1 cut(s)	915
Bsp19I	CCATGG	1 cut(s)	1533
BspACI	CCGC	7 cut(s)	216, 357, 521, 1232, 1443, 1929, 1956
BspANI	GGCC	8 cut(s)	71, 215, 266, 345, 877, 1190, 1311, 2008
BspCNI	CTCAG	2 cut(s)	907, 1505
BspFNI	CGCG	1 cut(s)	1958
BspLI	GGNNCC	2 cut(s)	7, 1816
BspPI	GGATC	2 cut(s)	200, 1954
BsrDI	GCAATG	5 cut(s)	390, 588, 647, 934, 1362
BsrFI	RCCGGY	2 cut(s)	218, 1172
BsrI	ACTGG	6 cut(s)	564, 908, 1169, 1312, 1325, 1516
BssAI	RCCGGY	2 cut(s)	218, 1172
BssECI	CCNNGG	7 cut(s)	21, 424, 499, 742, 1113, 1191, 1533
BssMI	GATC	6 cut(s)	108, 192, 588, 1005, 1450, 1959
BssT1I	CCWWGG	3 cut(s)	499, 742, 1533
Bst2UI	CCWGG	5 cut(s)	250, 298, 426, 1115, 1193
Bst4CI	ACNGT	5 cut(s)	115, 187, 313, 1210, 1849
BstAPI	GCANNNNNTGC	2 cut(s)	623, 1622
BstC8I	GCNNGC	2 cut(s)	337, 624
BstDEI	CTNAG	4 cut(s)	659, 915, 1492, 1755
BstDSI	CCRYGG	2 cut(s)	21, 1533
BstEII	GGTNACC	1 cut(s)	1475
BstENI	CCTNNNNNAGG	1 cut(s)	295
BstFNI	CGCG	1 cut(s)	1958
BstH2I	RGCGCY	1 cut(s)	138
BstHHI	GCGC	1 cut(s)	137
BstKTI	GATC	6 cut(s)	111, 195, 591, 1008, 1453, 1962
BstMAI	GTCTC	2 cut(s)	5, 1441
BstMBI	GATC	6 cut(s)	108, 192, 588, 1005, 1450, 1959
BstMWI	GCNNNNNNNGC	7 cut(s)	148, 623, 1196, 1406, 1622, 1681, 1823
BstNI	CCWGG	5 cut(s)	250, 298, 426, 1115, 1193
BstNSI	RCATGY	2 cut(s)	896, 1999
BstPAI	GACNNNNGTC	1 cut(s)	783
BstPI	GGTNACC	1 cut(s)	1475
BstSCI	CCNGG	7 cut(s)	248, 254, 296, 424, 626, 1113, 1191
BstSLI	GKGCMC	1 cut(s)	903
BstUI	CGCG	1 cut(s)	1958
BstV1I	GCAGC	7 cut(s)	111, 668, 1156, 1396, 1457, 1662, 1705
BstV2I	GAAGAC	1 cut(s)	952
BstXI	CCANNNNNNTGG	1 cut(s)	896
BsuI	GTATCC	2 cut(s)	918, 1774
BsuRI	GGCC	8 cut(s)	71, 215, 266, 345, 877, 1190, 1311, 2008
BtgI	CCRYGG	2 cut(s)	21, 1533
BtsI	GCAGTG	1 cut(s)	1684
BtsIMutI	CAGTG	7 cut(s)	309, 571, 706, 901, 1305, 1684, 1854
Cac8I	GCNNGC	2 cut(s)	337, 624
CfoI	GCGC	1 cut(s)	137
Cfr10I	RCCGGY	2 cut(s)	218, 1172
Cfr13I	GGNCC	7 cut(s)	6, 82, 252, 265, 1189, 1604, 2006
CseI	GACGC	2 cut(s)	157, 316
Csp6I	GTAC	3 cut(s)	839, 1609, 1999
CviAII	CATG	8 cut(s)	664, 717, 861, 893, 1456, 1486, 1534, 1996
CviQI	GTAC	3 cut(s)	839, 1609, 1999
DdeI	CTNAG	4 cut(s)	659, 915, 1492, 1755
DpnI	GATC	6 cut(s)	110, 194, 590, 1007, 1452, 1961
DpnII	GATC	6 cut(s)	108, 192, 588, 1005, 1450, 1959
DrdI	GACNNNNNNGTC	1 cut(s)	510
DseDI	GACNNNNNNGTC	1 cut(s)	510
EaeI	YGGCCR	1 cut(s)	213
EciI	GGCGGA	1 cut(s)	1221
Eco130I	CCWWGG	3 cut(s)	499, 742, 1533
Eco32I	GATATC	1 cut(s)	30
Eco47I	GGWCC	4 cut(s)	6, 82, 252, 1604
Eco57I	CTGAAG	3 cut(s)	682, 766, 1125
Eco88I	CYCGRG	1 cut(s)	227
Eco91I	GGTNACC	1 cut(s)	1475
EcoNI	CCTNNNNNAGG	1 cut(s)	295
EcoO65I	GGTNACC	1 cut(s)	1475
EcoRI	GAATTC	1 cut(s)	1885
EcoRII	CCWGG	5 cut(s)	248, 296, 424, 1113, 1191
EcoRV	GATATC	1 cut(s)	30
EcoT14I	CCWWGG	3 cut(s)	499, 742, 1533
ErhI	CCWWGG	3 cut(s)	499, 742, 1533
Esp3I	CGTCTC	1 cut(s)	5
FaeI	CATG	8 cut(s)	667, 720, 864, 896, 1459, 1489, 1537, 1999
FalI	AAGNNNNNCTT	4 cut(s)	680, 712, 1673, 1705
FaqI	GGGAC	5 cut(s)	19, 160, 583, 1784, 1858
FatI	CATG	8 cut(s)	663, 716, 860, 892, 1455, 1485, 1533, 1995
FauI	CCCGC	1 cut(s)	350
FauNDI	CATATG	1 cut(s)	1621
FbaI	TGATCA	2 cut(s)	588, 1005
Fnu4HI	GCNGC	9 cut(s)	125, 216, 682, 1170, 1410, 1446, 1676, 1719, 2020
Fsp4HI	GCNGC	9 cut(s)	125, 216, 682, 1170, 1410, 1446, 1676, 1719, 2020
FspBI	CTAG	2 cut(s)	738, 2023
GlaI	GCGC	1 cut(s)	136
GluI	GCNGC	9 cut(s)	125, 216, 682, 1170, 1410, 1446, 1676, 1719, 2020
GsaI	CCCAGC	2 cut(s)	146, 900
GsuI	CTGGAG	1 cut(s)	1342
HaeII	RGCGCY	1 cut(s)	138
HaeIII	GGCC	8 cut(s)	71, 215, 266, 345, 877, 1190, 1311, 2008
HapII	CCGG	5 cut(s)	92, 219, 255, 627, 1173
HgaI	GACGC	2 cut(s)	157, 316
HhaI	GCGC	1 cut(s)	137
Hin1II	CATG	8 cut(s)	667, 720, 864, 896, 1459, 1489, 1537, 1999
Hin6I	GCGC	1 cut(s)	135
HinP1I	GCGC	1 cut(s)	135
HincII	GTYRAC	2 cut(s)	49, 829
HindII	GTYRAC	2 cut(s)	49, 829
HinfI	GANTC	5 cut(s)	53, 178, 363, 713, 1750
HpaII	CCGG	5 cut(s)	92, 219, 255, 627, 1173
Hpy166II	GTNNAC	3 cut(s)	49, 829, 1055
Hpy188I	TCNGA	7 cut(s)	34, 183, 456, 800, 1105, 1672, 1891
Hpy188III	TCNNGA	6 cut(s)	77, 1009, 1179, 1468, 1738, 1843
Hpy8I	GTNNAC	3 cut(s)	49, 829, 1055
Hpy99I	CGWCG	2 cut(s)	332, 335
HpyAV	CCTTC	5 cut(s)	94, 301, 1655, 1753, 2019
HpyCH4III	ACNGT	5 cut(s)	115, 187, 313, 1210, 1849
HpyCH4IV	ACGT	1 cut(s)	767
HpyCH4V	TGCA	9 cut(s)	159, 383, 617, 640, 1041, 1293, 1459, 1901, 1995
HpyF10VI	GCNNNNNNNGC	7 cut(s)	148, 623, 1196, 1406, 1622, 1681, 1823
HpyF3I	CTNAG	4 cut(s)	659, 915, 1492, 1755
HpySE526I	ACGT	1 cut(s)	767
Hsp92II	CATG	8 cut(s)	667, 720, 864, 896, 1459, 1489, 1537, 1999
HspAI	GCGC	1 cut(s)	135
Ksp22I	TGATCA	2 cut(s)	588, 1005
Kzo9I	GATC	6 cut(s)	108, 192, 588, 1005, 1450, 1959
LmnI	GCTCC	7 cut(s)	103, 678, 839, 1279, 1555, 1814, 1867
Lsp1109I	GCAGC	7 cut(s)	111, 668, 1156, 1396, 1457, 1662, 1705
LweI	GCATC	1 cut(s)	168
MaeI	CTAG	2 cut(s)	738, 2023
MaeII	ACGT	1 cut(s)	767
MaeIII	GTNAC	4 cut(s)	428, 1108, 1210, 1475
MalI	GATC	6 cut(s)	110, 194, 590, 1007, 1452, 1961
MboI	GATC	6 cut(s)	108, 192, 588, 1005, 1450, 1959
MboII	GAAGA	7 cut(s)	226, 229, 452, 688, 952, 1058, 1963
MhlI	GDGCHC	2 cut(s)	903, 1262
MluCI	AATT	7 cut(s)	269, 672, 1000, 1221, 1647, 1885, 1947
MlyI	GAGTC	1 cut(s)	1744
MmeI	TCCRAC	2 cut(s)	778, 1068
MroXI	GAANNNNTTC	1 cut(s)	290
MseI	TTAA	6 cut(s)	450, 671, 687, 759, 1077, 1556
MslI	CAYNNNNRTG	3 cut(s)	581, 1832, 1994
MspA1I	CMGCKG	1 cut(s)	914
MspI	CCGG	5 cut(s)	92, 219, 255, 627, 1173
MspR9I	CCNGG	7 cut(s)	250, 256, 298, 426, 628, 1115, 1193
MvaI	CCWGG	5 cut(s)	250, 298, 426, 1115, 1193
MvnI	CGCG	1 cut(s)	1958
MwoI	GCNNNNNNNGC	7 cut(s)	148, 623, 1196, 1406, 1622, 1681, 1823
NciI	CCSGG	2 cut(s)	256, 628
NcoI	CCATGG	1 cut(s)	1533
NdeI	CATATG	1 cut(s)	1621
NdeII	GATC	6 cut(s)	108, 192, 588, 1005, 1450, 1959
NlaIII	CATG	8 cut(s)	667, 720, 864, 896, 1459, 1489, 1537, 1999
NlaIV	GGNNCC	2 cut(s)	7, 1816
NspI	RCATGY	2 cut(s)	896, 1999
PdmI	GAANNNNTTC	1 cut(s)	290
PfeI	GAWTC	4 cut(s)	53, 178, 363, 713
PflMI	CCANNNNNTGG	1 cut(s)	1522
PfoI	TCCNGGA	1 cut(s)	248
PkrI	GCNGC	9 cut(s)	126, 217, 683, 1171, 1411, 1447, 1677, 1720, 2021
PleI	GAGTC	1 cut(s)	1744
PpsI	GAGTC	1 cut(s)	1744
PshAI	GACNNNNGTC	1 cut(s)	783
PshBI	ATTAAT	1 cut(s)	450
Psp6I	CCWGG	5 cut(s)	248, 296, 424, 1113, 1191
PspEI	GGTNACC	1 cut(s)	1475
PspFI	CCCAGC	2 cut(s)	142, 896
PspGI	CCWGG	5 cut(s)	248, 296, 424, 1113, 1191
PspN4I	GGNNCC	2 cut(s)	7, 1816
PspPI	GGNCC	7 cut(s)	6, 82, 252, 265, 1189, 1604, 2006
PvuII	CAGCTG	1 cut(s)	914
RsaI	GTAC	3 cut(s)	840, 1610, 2000
RsaNI	GTAC	3 cut(s)	839, 1609, 1999
RseI	CAYNNNNRTG	3 cut(s)	581, 1832, 1994
SaqAI	TTAA	6 cut(s)	450, 671, 687, 759, 1077, 1556
SatI	GCNGC	9 cut(s)	125, 216, 682, 1170, 1410, 1446, 1676, 1719, 2020
Sau3AI	GATC	6 cut(s)	108, 192, 588, 1005, 1450, 1959
Sau96I	GGNCC	7 cut(s)	6, 82, 252, 265, 1189, 1604, 2006
SchI	GAGTC	1 cut(s)	1744
ScrFI	CCNGG	7 cut(s)	250, 256, 298, 426, 628, 1115, 1193
SduI	GDGCHC	2 cut(s)	903, 1262
SfaNI	GCATC	1 cut(s)	168
SinI	GGWCC	4 cut(s)	6, 82, 252, 1604
SmiMI	CAYNNNNRTG	3 cut(s)	581, 1832, 1994
SmlI	CTYRAG	2 cut(s)	1145, 1738
SmoI	CTYRAG	2 cut(s)	1145, 1738
Sse9I	AATT	7 cut(s)	269, 672, 1000, 1221, 1647, 1885, 1947
SsiI	CCGC	7 cut(s)	216, 357, 521, 1232, 1443, 1929, 1956
SspI	AATATT	1 cut(s)	1632
SspMI	CTAG	2 cut(s)	738, 2023
StyD4I	CCNGG	7 cut(s)	248, 254, 296, 424, 626, 1113, 1191
StyI	CCWWGG	3 cut(s)	499, 742, 1533
TaaI	ACNGT	5 cut(s)	115, 187, 313, 1210, 1849
TaiI	ACGT	1 cut(s)	770
TaqI	TCGA	2 cut(s)	777, 1205
TaqII	GACCGA	2 cut(s)	23, 99
TasI	AATT	7 cut(s)	269, 672, 1000, 1221, 1647, 1885, 1947
TatI	WGTACW	1 cut(s)	1998
TauI	GCSGC	1 cut(s)	218
TfiI	GAWTC	4 cut(s)	53, 178, 363, 713
Tru1I	TTAA	6 cut(s)	450, 671, 687, 759, 1077, 1556
Tru9I	TTAA	6 cut(s)	450, 671, 687, 759, 1077, 1556
TscAI	CASTG	7 cut(s)	316, 571, 706, 908, 1312, 1691, 1854
TseI	GCWGC	8 cut(s)	124, 681, 1169, 1409, 1445, 1675, 1718, 2019
TspDTI	ATGAA	5 cut(s)	45, 705, 952, 1348, 1359
TspGWI	ACGGA	3 cut(s)	10, 826, 1596
TspRI	CASTG	7 cut(s)	316, 571, 706, 908, 1312, 1691, 1854
Van91I	CCANNNNNTGG	1 cut(s)	1522
VpaK11BI	GGWCC	4 cut(s)	6, 82, 252, 1604
VspI	ATTAAT	1 cut(s)	450
XagI	CCTNNNNNAGG	1 cut(s)	295
XapI	RAATTY	1 cut(s)	1885
XceI	RCATGY	2 cut(s)	896, 1999
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1560
XmnI	GAANNNNTTC	1 cut(s)	290
XspI	CTAG	2 cut(s)	738, 2023

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.