Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000961

Physical Location & Seq

Genomic Coordinates Forward (+)

82363966 .. 82367580

Gene Structure 3615 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G054770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2028 bp

ATGGGGACCGAGACGACCTCCGTGGAGATATCCGAGCCGTTGCTTGTTGACGACTCAGACAAAATCAAGGCCGTTGGGGAGGAGGACCGACTGCCGGAATGGAAGGAGCAGATCACGGTGAGAGGGCTGGTGGTGAGCGCCGTGCTGGGGACCCTGTTCTGCATCATCACACACAAGCTGAATCTGACGGTGGGGATCATCCCGTCCTTGAATGTGGCCGCCGGTCTGCTCGGGTTCTTCTTCGTCAAGTCCTGGACCGGGTTCTTGGCCCAATTTGGGTTTCAGGTGAAGCCCTTCACCAGGCAAGAGAACACTGTCATCCAAACTTGCGTCGTCGCTTGCTATGGCCTCGCCTTTAGCGGGGGATTCGGTTCGTATTTGGTTGCAATGGATGAGAGAACATATAAACTTATCGGGGAGGATTACCCTGGTAACAGGGCAGAAGATGTTATTAATCCGAGCTTGTGGTGGATGACTGGTTTCCTCGTTGTTGTCAGCTTCCTTGGACTTTTTAGTCTCGTTCCGCTTCGCAAGGTTATGGTTATGGATTACAAACTTACATACCCCAGTGGGACTGCCACAGCAATGTTGATCAATAGCTTTCACACTAAAAGTGGTGCAGAGCTTGCCGGGAAGCAAGTGCAATGTCTTGGAAAGTATTTAAGCATGAGTTTAATTTGGAGCTGCTTTAAGTGGTTCTTCAGTGGTATTGGAGATTCATGTGGGTTTGACAACTTTCCTAGCCTTGGATTGACACTTTTTAAGAACACGTTTTATTTCGACTTCAGTCCTACTTATGTCGGATGTGGTCTTATTTGCCCTCACATAGTCAACTGCTCAGTACTTCTTGGGGCTATCATATCATGGGGTTTCCTTTGGCCTCTCATATCCCAACATGCTGGGCACTGGTATCCAGCTGACCTTGGTAGCAATGATTTCAAAGGTCTTTATGGATATAAGGTCTTCATAGCTATTGCCCTTATTTTGGGGGATGGTCTATACAATTTGATCAAGATTATAGCCATTACCATCAAGGAAATATGCAATAAAAGTAGTATACAGAGCAATCTTCCTTTGGTTAAAGAAAAGTTGGATGGTGAGAGTTCTGAAGTAAACCTGGAACAAAAAAAGAGGGATGAGGTATTTCTCAAGGATAGAATACCAAACTGGGTTGCCGGTTCTGGATATGTGGCCCTGGTGGCAATATCGACAGCAACAATGCCAATTATCTTTCCGCCTCTCAAATGGTATTTGGTGCTGTGCTCATACATCCTTGCTCCTGCTCTTGCCTTTTGCAACTCCTATGGCACTGGCCTCACAGACTGGAGTTTAGCTTCAACTTATGGGAAAATAGGTCTTTTCATCATTGCTTCATTAGTGGGAAGTGATGGTGGGGTTATAGCTGGTTTAGCTGCTTGTGGGGTGATGATGTCCATTGTCTCTACCGCAGCCGATCTCATGCAAGACTTCAAGACAGGTTACCTCACCATGTCCTCGGCCAAGTCTATGTTTATCAGCCAGTTAGTGGGAACAGCCATGGGTTGTGTGATAGCTCCATTAACATTTTGGTTGTTTTGGACTGCTTTTGATATTGGCTCACCTGATGGTCCGTACAAAGCACCATATGCTGTAATATTCAGGGAAATGGCAATTTTAGGTATTGAAGGCTTCTCCGAGCTGCCAAAGCACTGCTTGGCTATGTGTTGCGGTTTCTTTGTGGCTGCTTTGGTGATAAACCTCTTGAGAGACGTGACTCCTAAGAAGGTATCCCAATATATTCCTATTCCAATGGCTATGGCAGTCCCATTCTACATCGGAGCCTACTTTGCCATTGATATGTTTGTCGGGACAGTGATATTGTTTATATGGGAGCGAATGAATAGGCAGAATTCAGAGGATTTTGCAGGGGCAGTCGCTTCGGGTCTAATATGCGGTGATGGGATTTGGACAATTCCATCCGCGATCCTCTCTATCTTCAAGGTCAATCCACCCATCTGCATGTACTTTGGGCCTTCTTGGAGCAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0016020 GO:0022857 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

675

Amino Acids

73.78

Weight (kDa)

5.8

Isoelectric Point (pI)

29.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	37 - 656	3.8e-148	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000961)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27020 AT5G41000 AT5G41000 AT5G41000
fragaria_vesca	FvH4_6g53820
malus_domestica	MD09G1008400.v1.1 MD17G1002400.v1.1
prunus_persica	Prupe.3G197700_v2.0.a1 Prupe.3G308600_v2.0.a1
pyrus_communis	pycom111g00670 pycom17g00700
rosa_chinensis	RchiOBHm_Chr2g0155151 RchiOBHm_Chr2g0175951 RchiOBHm_Chr4g0387931 RchiOBHm_Chr4g0404811 RchiOBHm_Chr6g0247711 RchiOBHm_Chr6g0308411 RchiOBHm_Chr7g0225381
rosa_laevigata	RLG00000001821 RLG00000022368
rosa_multiflora	Rmu_co8150112.1_g000001 Rmu_sc0007419.1_g000008 Rmu_sc0012106.1_g000001 Rmu_sc0018801.1_g000005
rosa_roxburghii	Rroxscaffold_2G00076910 Rroxscaffold_3G00233840 Rroxscaffold_5G00348620 Rroxscaffold_6G00388000 Rroxscaffold_7G00165420
rosa_rugosa	Rorug01G0171700 Rorug02G0588900 Rorug02G0589000 Rorug03G0332100 Rorug03G0332200 Rorug05G0042300 Rorug05G0110200 Rorug07G0229200
rosa_samantha	Rh1AG155500 Rh1CG145800 Rh2AG668100 Rh2BG679600 Rh2CG642400 Rh2DG572100 Rh2DG693100 Rh4AG072500 Rh4AG074300 Rh4BG070600 Rh4CG078900 Rh4DG161200 Rh5AG218500 Rh5BG431200 Rh5BG537600 Rh5CG454500 Rh5CG561600 Rh6AG476100 Rh7AG374200 Rh7BG363900 Rh7CG392400 Rh7DG375100
rosa_wichuraiana	Rw2G054770 Rw3G025300 Rw4G006410 Rw7G031640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	513
AccB7I	CCANNNNNTGG	1 cut(s)	1525
AccI	GTMKAC	1 cut(s)	1057
AccII	CGCG	1 cut(s)	1961
AciI	CCGC	8 cut(s)	219, 360, 524, 1235, 1446, 1707, 1932, 1959
AclWI	GGATC	2 cut(s)	203, 1957
AcoI	YGGCCR	2 cut(s)	216, 1497
AcsI	RAATTY	1 cut(s)	1888
AcuI	CTGAAG	3 cut(s)	685, 769, 1128
AfaI	GTAC	3 cut(s)	843, 1613, 2003
AfiI	CCNNNNNNNGG	9 cut(s)	94, 147, 258, 276, 300, 360, 746, 985, 1525
AflIII	ACRYGT	1 cut(s)	768
AgsI	TTSAA	6 cut(s)	211, 940, 1338, 1471, 1664, 1978
AjiI	CACGTC	1 cut(s)	1750
AjnI	CCWGG	5 cut(s)	251, 299, 427, 1116, 1194
AjuI	GAANNNNNNNTTGG	2 cut(s)	264, 296
Alw21I	GWGCWC	1 cut(s)	1265
Alw26I	GTCTC	4 cut(s)	5, 521, 1444, 1740
AlwI	GGATC	2 cut(s)	203, 1957
Ama87I	CYCGRG	1 cut(s)	230
AoxI	GGCC	9 cut(s)	69, 216, 267, 346, 878, 1191, 1312, 1497, 2009
ApeKI	GCWGC	6 cut(s)	684, 1412, 1448, 1678, 1721, 2022
ApoI	RAATTY	1 cut(s)	1888
AseI	ATTAAT	1 cut(s)	453
Asp700I	GAANNNNTTC	1 cut(s)	293
AspLEI	GCGC	1 cut(s)	140
AspS9I	GGNCC	8 cut(s)	6, 85, 150, 255, 268, 1192, 1607, 2009
AsuC2I	CCSGG	2 cut(s)	259, 631
AvaI	CYCGRG	1 cut(s)	230
AvaII	GGWCC	5 cut(s)	6, 85, 150, 255, 1607
BaeGI	GKGCMC	1 cut(s)	906
BbsI	GAAGAC	1 cut(s)	955
Bbv12I	GWGCWC	1 cut(s)	1265
BbvI	GCAGC	5 cut(s)	671, 1399, 1460, 1665, 1708
BccI	CCATC	8 cut(s)	986, 1037, 1088, 1382, 1598, 1931, 1963, 2000
BceAI	ACGGC	3 cut(s)	22, 56, 125
BcgI	CGANNNNNNTGC	2 cut(s)	1899, 1933
BciT130I	CCWGG	5 cut(s)	253, 301, 429, 1118, 1196
BciVI	GTATCC	2 cut(s)	921, 1777
BclI	TGATCA	2 cut(s)	591, 1008
BcnI	CCSGG	2 cut(s)	259, 631
BcoDI	GTCTC	4 cut(s)	5, 521, 1444, 1740
BfaI	CTAG	2 cut(s)	741, 2026
BfoI	RGCGCY	1 cut(s)	141
BfuI	GTATCC	2 cut(s)	921, 1777
BglI	GCCNNNNNGGC	1 cut(s)	1199
BisI	GCNGC	7 cut(s)	219, 685, 1413, 1449, 1679, 1722, 2023
BlsI	GCNGC	7 cut(s)	220, 686, 1414, 1450, 1680, 1723, 2024
BmcAI	AGTACT	1 cut(s)	843
Bme1390I	CCNGG	7 cut(s)	253, 259, 301, 429, 631, 1118, 1196
Bme18I	GGWCC	5 cut(s)	6, 85, 150, 255, 1607
BmeT110I	CYCGRG	1 cut(s)	230
BmgBI	CACGTC	1 cut(s)	1750
BmgT120I	GGNCC	8 cut(s)	6, 85, 150, 255, 268, 1192, 1607, 2009
BmiI	GGNNCC	4 cut(s)	7, 151, 152, 1819
BmrFI	CCNGG	7 cut(s)	253, 259, 301, 429, 631, 1118, 1196
BmrI	ACTGGG	2 cut(s)	561, 1177
BmsI	GCATC	1 cut(s)	171
BmuI	ACTGGG	2 cut(s)	561, 1177
BoxI	GACNNNNGTC	1 cut(s)	786
BpiI	GAAGAC	1 cut(s)	955
BplI	GAGNNNNNCTC	1 cut(s)	34
BpmI	CTGGAG	1 cut(s)	1345
BpuEI	CTTGAG	2 cut(s)	1133, 1762
BpuMI	CCSGG	2 cut(s)	259, 631
BsaJI	CCNNGG	8 cut(s)	21, 427, 502, 745, 922, 1194, 1494, 1536
Bsc4I	CCNNNNNNNGG	9 cut(s)	94, 147, 258, 276, 300, 360, 746, 985, 1525
Bse118I	RCCGGY	2 cut(s)	221, 1175
Bse1I	ACTGG	7 cut(s)	481, 567, 911, 1172, 1315, 1328, 1519
Bse3DI	GCAATG	5 cut(s)	393, 591, 650, 937, 1365
BseBI	CCWGG	5 cut(s)	253, 301, 429, 1118, 1196
BseDI	CCNNGG	8 cut(s)	21, 427, 502, 745, 922, 1194, 1494, 1536
BseLI	CCNNNNNNNGG	9 cut(s)	94, 147, 258, 276, 300, 360, 746, 985, 1525
BseMI	GCAATG	5 cut(s)	393, 591, 650, 937, 1365
BseMII	CTCAG	2 cut(s)	69, 852
BseNI	ACTGG	7 cut(s)	481, 567, 911, 1172, 1315, 1328, 1519
BseRI	GAGGAG	1 cut(s)	95
BseSI	GKGCMC	1 cut(s)	906
BseXI	GCAGC	5 cut(s)	671, 1399, 1460, 1665, 1708
BseYI	CCCAGC	2 cut(s)	145, 899
BsgI	GTGCAG	1 cut(s)	639
Bsh1236I	CGCG	1 cut(s)	1961
BshFI	GGCC	9 cut(s)	71, 218, 269, 348, 880, 1193, 1314, 1499, 2011
BsiHKAI	GWGCWC	1 cut(s)	1265
BsiHKCI	CYCGRG	1 cut(s)	230
BsiSI	CCGG	5 cut(s)	95, 222, 258, 630, 1176
BslFI	GGGAC	5 cut(s)	19, 163, 586, 1787, 1861
BslI	CCNNNNNNNGG	9 cut(s)	94, 147, 258, 276, 300, 360, 746, 985, 1525
BsmAI	GTCTC	4 cut(s)	5, 521, 1444, 1740
BsmBI	CGTCTC	2 cut(s)	5, 1740
BsmFI	GGGAC	5 cut(s)	19, 163, 586, 1787, 1861
BsnI	GGCC	9 cut(s)	71, 218, 269, 348, 880, 1193, 1314, 1499, 2011
BsoBI	CYCGRG	1 cut(s)	230
Bsp1286I	GDGCHC	2 cut(s)	906, 1265
Bsp143I	GATC	6 cut(s)	111, 195, 591, 1008, 1453, 1962
Bsp19I	CCATGG	1 cut(s)	1536
BspACI	CCGC	8 cut(s)	219, 360, 524, 1235, 1446, 1707, 1932, 1959
BspANI	GGCC	9 cut(s)	71, 218, 269, 348, 880, 1193, 1314, 1499, 2011
BspCNI	CTCAG	2 cut(s)	68, 851
BspFNI	CGCG	1 cut(s)	1961
BspLI	GGNNCC	4 cut(s)	7, 151, 152, 1819
BspPI	GGATC	2 cut(s)	203, 1957
BsrDI	GCAATG	5 cut(s)	393, 591, 650, 937, 1365
BsrFI	RCCGGY	2 cut(s)	221, 1175
BsrI	ACTGG	7 cut(s)	481, 567, 911, 1172, 1315, 1328, 1519
BssAI	RCCGGY	2 cut(s)	221, 1175
BssECI	CCNNGG	8 cut(s)	21, 427, 502, 745, 922, 1194, 1494, 1536
BssMI	GATC	6 cut(s)	111, 195, 591, 1008, 1453, 1962
BssNAI	GTATAC	1 cut(s)	1058
BssT1I	CCWWGG	4 cut(s)	502, 745, 922, 1536
Bst1107I	GTATAC	1 cut(s)	1058
Bst2UI	CCWGG	5 cut(s)	253, 301, 429, 1118, 1196
Bst4CI	ACNGT	4 cut(s)	118, 190, 316, 1852
BstAPI	GCANNNNNTGC	2 cut(s)	626, 1625
BstC8I	GCNNGC	2 cut(s)	340, 627
BstDEI	CTNAG	3 cut(s)	55, 838, 1758
BstDSI	CCRYGG	2 cut(s)	21, 1536
BstEII	GGTNACC	1 cut(s)	1478
BstENI	CCTNNNNNAGG	1 cut(s)	298
BstFNI	CGCG	1 cut(s)	1961
BstH2I	RGCGCY	1 cut(s)	141
BstHHI	GCGC	1 cut(s)	140
BstKTI	GATC	6 cut(s)	114, 198, 594, 1011, 1456, 1965
BstMAI	GTCTC	4 cut(s)	5, 521, 1444, 1740
BstMBI	GATC	6 cut(s)	111, 195, 591, 1008, 1453, 1962
BstMWI	GCNNNNNNNGC	6 cut(s)	626, 1199, 1409, 1625, 1684, 1826
BstNI	CCWGG	5 cut(s)	253, 301, 429, 1118, 1196
BstNSI	RCATGY	2 cut(s)	899, 2002
BstPAI	GACNNNNGTC	1 cut(s)	786
BstPI	GGTNACC	1 cut(s)	1478
BstSCI	CCNGG	7 cut(s)	251, 257, 299, 427, 629, 1116, 1194
BstSLI	GKGCMC	1 cut(s)	906
BstUI	CGCG	1 cut(s)	1961
BstV1I	GCAGC	5 cut(s)	671, 1399, 1460, 1665, 1708
BstV2I	GAAGAC	1 cut(s)	955
BstXI	CCANNNNNNTGG	1 cut(s)	899
BstZ17I	GTATAC	1 cut(s)	1058
BsuI	GTATCC	2 cut(s)	921, 1777
BsuRI	GGCC	9 cut(s)	71, 218, 269, 348, 880, 1193, 1314, 1499, 2011
BtgI	CCRYGG	2 cut(s)	21, 1536
BtrI	CACGTC	1 cut(s)	1750
BtsI	GCAGTG	1 cut(s)	1687
BtsIMutI	CAGTG	7 cut(s)	312, 574, 709, 904, 1308, 1687, 1857
Cac8I	GCNNGC	2 cut(s)	340, 627
CfoI	GCGC	1 cut(s)	140
Cfr10I	RCCGGY	2 cut(s)	221, 1175
Cfr13I	GGNCC	8 cut(s)	6, 85, 150, 255, 268, 1192, 1607, 2009
CseI	GACGC	1 cut(s)	319
Csp6I	GTAC	3 cut(s)	842, 1612, 2002
CviAII	CATG	8 cut(s)	667, 720, 864, 896, 1459, 1489, 1537, 1999
CviQI	GTAC	3 cut(s)	842, 1612, 2002
DdeI	CTNAG	3 cut(s)	55, 838, 1758
DpnI	GATC	6 cut(s)	113, 197, 593, 1010, 1455, 1964
DpnII	GATC	6 cut(s)	111, 195, 591, 1008, 1453, 1962
DrdI	GACNNNNNNGTC	1 cut(s)	513
DseDI	GACNNNNNNGTC	1 cut(s)	513
EaeI	YGGCCR	2 cut(s)	216, 1497
EciI	GGCGGA	1 cut(s)	1224
Eco130I	CCWWGG	4 cut(s)	502, 745, 922, 1536
Eco32I	GATATC	1 cut(s)	30
Eco47I	GGWCC	5 cut(s)	6, 85, 150, 255, 1607
Eco57I	CTGAAG	3 cut(s)	685, 769, 1128
Eco88I	CYCGRG	1 cut(s)	230
Eco91I	GGTNACC	1 cut(s)	1478
EcoNI	CCTNNNNNAGG	1 cut(s)	298
EcoO109I	RGGNCCY	1 cut(s)	150
EcoO65I	GGTNACC	1 cut(s)	1478
EcoRI	GAATTC	1 cut(s)	1888
EcoRII	CCWGG	5 cut(s)	251, 299, 427, 1116, 1194
EcoRV	GATATC	1 cut(s)	30
EcoT14I	CCWWGG	4 cut(s)	502, 745, 922, 1536
ErhI	CCWWGG	4 cut(s)	502, 745, 922, 1536
Esp3I	CGTCTC	2 cut(s)	5, 1740
FaeI	CATG	8 cut(s)	670, 723, 867, 899, 1462, 1492, 1540, 2002
FalI	AAGNNNNNCTT	4 cut(s)	683, 715, 1676, 1708
FaqI	GGGAC	5 cut(s)	19, 163, 586, 1787, 1861
FatI	CATG	8 cut(s)	666, 719, 863, 895, 1458, 1488, 1536, 1998
FauI	CCCGC	1 cut(s)	353
FauNDI	CATATG	1 cut(s)	1624
FbaI	TGATCA	2 cut(s)	591, 1008
FblI	GTMKAC	1 cut(s)	1057
Fnu4HI	GCNGC	7 cut(s)	219, 685, 1413, 1449, 1679, 1722, 2023
Fsp4HI	GCNGC	7 cut(s)	219, 685, 1413, 1449, 1679, 1722, 2023
FspBI	CTAG	2 cut(s)	741, 2026
GlaI	GCGC	1 cut(s)	139
GluI	GCNGC	7 cut(s)	219, 685, 1413, 1449, 1679, 1722, 2023
GsaI	CCCAGC	2 cut(s)	149, 903
GsuI	CTGGAG	1 cut(s)	1345
HaeII	RGCGCY	1 cut(s)	141
HaeIII	GGCC	9 cut(s)	71, 218, 269, 348, 880, 1193, 1314, 1499, 2011
HapII	CCGG	5 cut(s)	95, 222, 258, 630, 1176
HgaI	GACGC	1 cut(s)	319
HhaI	GCGC	1 cut(s)	140
Hin1II	CATG	8 cut(s)	670, 723, 867, 899, 1462, 1492, 1540, 2002
Hin6I	GCGC	1 cut(s)	138
HinP1I	GCGC	1 cut(s)	138
HincII	GTYRAC	2 cut(s)	49, 832
HindII	GTYRAC	2 cut(s)	49, 832
HinfI	GANTC	5 cut(s)	53, 181, 366, 716, 1753
HpaII	CCGG	5 cut(s)	95, 222, 258, 630, 1176
Hpy166II	GTNNAC	4 cut(s)	49, 832, 1058, 1114
Hpy188I	TCNGA	9 cut(s)	34, 58, 186, 459, 803, 1108, 1675, 1817, 1894
Hpy188III	TCNNGA	5 cut(s)	1012, 1182, 1471, 1741, 1846
Hpy8I	GTNNAC	4 cut(s)	49, 832, 1058, 1114
Hpy99I	CGWCG	2 cut(s)	335, 338
HpyAV	CCTTC	5 cut(s)	97, 304, 1658, 1756, 2022
HpyCH4III	ACNGT	4 cut(s)	118, 190, 316, 1852
HpyCH4IV	ACGT	2 cut(s)	770, 1749
HpyCH4V	TGCA	9 cut(s)	162, 386, 620, 643, 1044, 1296, 1462, 1904, 1998
HpyF10VI	GCNNNNNNNGC	6 cut(s)	626, 1199, 1409, 1625, 1684, 1826
HpyF3I	CTNAG	3 cut(s)	55, 838, 1758
HpySE526I	ACGT	2 cut(s)	770, 1749
Hsp92II	CATG	8 cut(s)	670, 723, 867, 899, 1462, 1492, 1540, 2002
HspAI	GCGC	1 cut(s)	138
KflI	GGGWCCC	1 cut(s)	150
Ksp22I	TGATCA	2 cut(s)	591, 1008
Kzo9I	GATC	6 cut(s)	111, 195, 591, 1008, 1453, 1962
LmnI	GCTCC	7 cut(s)	106, 681, 1282, 1558, 1817, 1870, 2019
Lsp1109I	GCAGC	5 cut(s)	671, 1399, 1460, 1665, 1708
LweI	GCATC	1 cut(s)	171
MaeI	CTAG	2 cut(s)	741, 2026
MaeII	ACGT	2 cut(s)	770, 1749
MaeIII	GTNAC	3 cut(s)	431, 1478, 1750
MalI	GATC	6 cut(s)	113, 197, 593, 1010, 1455, 1964
MboI	GATC	6 cut(s)	111, 195, 591, 1008, 1453, 1962
MboII	GAAGA	7 cut(s)	229, 232, 455, 691, 955, 1061, 1966
MhlI	GDGCHC	2 cut(s)	906, 1265
MluCI	AATT	7 cut(s)	272, 675, 1003, 1224, 1650, 1888, 1950
MlyI	GAGTC	2 cut(s)	47, 1747
MmeI	TCCRAC	2 cut(s)	781, 1071
MroXI	GAANNNNTTC	1 cut(s)	293
MseI	TTAA	7 cut(s)	453, 662, 674, 690, 762, 1080, 1559
MslI	CAYNNNNRTG	3 cut(s)	584, 1835, 1997
MspA1I	CMGCKG	1 cut(s)	917
MspI	CCGG	5 cut(s)	95, 222, 258, 630, 1176
MspR9I	CCNGG	7 cut(s)	253, 259, 301, 429, 631, 1118, 1196
MvaI	CCWGG	5 cut(s)	253, 301, 429, 1118, 1196
MvnI	CGCG	1 cut(s)	1961
MwoI	GCNNNNNNNGC	6 cut(s)	626, 1199, 1409, 1625, 1684, 1826
NciI	CCSGG	2 cut(s)	259, 631
NcoI	CCATGG	1 cut(s)	1536
NdeI	CATATG	1 cut(s)	1624
NdeII	GATC	6 cut(s)	111, 195, 591, 1008, 1453, 1962
NlaIII	CATG	8 cut(s)	670, 723, 867, 899, 1462, 1492, 1540, 2002
NlaIV	GGNNCC	4 cut(s)	7, 151, 152, 1819
NmeAIII	GCCGAG	1 cut(s)	1475
NmuCI	GTSAC	1 cut(s)	1750
NspI	RCATGY	2 cut(s)	899, 2002
PdmI	GAANNNNTTC	1 cut(s)	293
PfeI	GAWTC	3 cut(s)	181, 366, 716
PflMI	CCANNNNNTGG	1 cut(s)	1525
PfoI	TCCNGGA	1 cut(s)	251
PkrI	GCNGC	7 cut(s)	220, 686, 1414, 1450, 1680, 1723, 2024
PleI	GAGTC	2 cut(s)	47, 1747
PpsI	GAGTC	2 cut(s)	47, 1747
PpuMI	RGGWCCY	1 cut(s)	150
PshAI	GACNNNNGTC	1 cut(s)	786
PshBI	ATTAAT	1 cut(s)	453
Psp5II	RGGWCCY	1 cut(s)	150
Psp6I	CCWGG	5 cut(s)	251, 299, 427, 1116, 1194
PspEI	GGTNACC	1 cut(s)	1478
PspFI	CCCAGC	2 cut(s)	145, 899
PspGI	CCWGG	5 cut(s)	251, 299, 427, 1116, 1194
PspN4I	GGNNCC	4 cut(s)	7, 151, 152, 1819
PspPI	GGNCC	8 cut(s)	6, 85, 150, 255, 268, 1192, 1607, 2009
PspPPI	RGGWCCY	1 cut(s)	150
PvuII	CAGCTG	1 cut(s)	917
RsaI	GTAC	3 cut(s)	843, 1613, 2003
RsaNI	GTAC	3 cut(s)	842, 1612, 2002
RseI	CAYNNNNRTG	3 cut(s)	584, 1835, 1997
SaqAI	TTAA	7 cut(s)	453, 662, 674, 690, 762, 1080, 1559
SatI	GCNGC	7 cut(s)	219, 685, 1413, 1449, 1679, 1722, 2023
Sau3AI	GATC	6 cut(s)	111, 195, 591, 1008, 1453, 1962
Sau96I	GGNCC	8 cut(s)	6, 85, 150, 255, 268, 1192, 1607, 2009
ScaI	AGTACT	1 cut(s)	843
SchI	GAGTC	2 cut(s)	47, 1747
ScrFI	CCNGG	7 cut(s)	253, 259, 301, 429, 631, 1118, 1196
SduI	GDGCHC	2 cut(s)	906, 1265
SfaNI	GCATC	1 cut(s)	171
SinI	GGWCC	5 cut(s)	6, 85, 150, 255, 1607
SmiMI	CAYNNNNRTG	3 cut(s)	584, 1835, 1997
SmlI	CTYRAG	2 cut(s)	1148, 1741
SmoI	CTYRAG	2 cut(s)	1148, 1741
Sse9I	AATT	7 cut(s)	272, 675, 1003, 1224, 1650, 1888, 1950
SsiI	CCGC	8 cut(s)	219, 360, 524, 1235, 1446, 1707, 1932, 1959
SspI	AATATT	1 cut(s)	1635
SspMI	CTAG	2 cut(s)	741, 2026
StyD4I	CCNGG	7 cut(s)	251, 257, 299, 427, 629, 1116, 1194
StyI	CCWWGG	4 cut(s)	502, 745, 922, 1536
TaaI	ACNGT	4 cut(s)	118, 190, 316, 1852
TaiI	ACGT	2 cut(s)	773, 1752
TaqI	TCGA	2 cut(s)	780, 1208
TaqII	GACCGA	2 cut(s)	23, 102
TasI	AATT	7 cut(s)	272, 675, 1003, 1224, 1650, 1888, 1950
TatI	WGTACW	2 cut(s)	841, 2001
TauI	GCSGC	1 cut(s)	221
TfiI	GAWTC	3 cut(s)	181, 366, 716
Tru1I	TTAA	7 cut(s)	453, 662, 674, 690, 762, 1080, 1559
Tru9I	TTAA	7 cut(s)	453, 662, 674, 690, 762, 1080, 1559
TscAI	CASTG	7 cut(s)	319, 574, 709, 911, 1315, 1694, 1857
TseFI	GTSAC	1 cut(s)	1750
TseI	GCWGC	6 cut(s)	684, 1412, 1448, 1678, 1721, 2022
Tsp45I	GTSAC	1 cut(s)	1750
TspDTI	ATGAA	5 cut(s)	708, 955, 1351, 1362, 1892
TspGWI	ACGGA	2 cut(s)	10, 1599
TspRI	CASTG	7 cut(s)	319, 574, 709, 911, 1315, 1694, 1857
Van91I	CCANNNNNTGG	1 cut(s)	1525
VpaK11BI	GGWCC	5 cut(s)	6, 85, 150, 255, 1607
VspI	ATTAAT	1 cut(s)	453
XagI	CCTNNNNNAGG	1 cut(s)	298
XapI	RAATTY	1 cut(s)	1888
XceI	RCATGY	2 cut(s)	899, 2002
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1563
XmiI	GTMKAC	1 cut(s)	1057
XmnI	GAANNNNTTC	1 cut(s)	293
XspI	CTAG	2 cut(s)	741, 2026
ZrmI	AGTACT	1 cut(s)	843

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.