RchiOBHm_Chr2g0155151

Transporter

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Forward (+)
72156624 .. 72157501
878 bp
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UTR
Exon/CDS
Intron
PRQ52405

Sequence Viewer

Length: 312 bp
ATGACAGGGGGATTCGGTTCGTATTTGGTTGCAATGGATGAGAGAACATATAAACTCATCGGGGAGGATTACCCTGGTAACAGGGCAGAAGATGTTATTAATCCGAGCTTGTGGTGGATGACTGGTTTCCTCGCAAGGAAGCAAGTGCAATGTCTTGGAAAGTATCTAAGCATGAGTTTAATTTGGAGCTGCTTTAAGTGGTTCTTCAGTGGTATTGGAGATTCATGTGGGTTTGACAACTTTCCTAGCCTTGAATTGACACTTTTTAAGAACACTTTTATGGTGAAGTTTGGTTCCTTCATTTTGTTGTGA

Protein Analysis

103

Amino Acids

11.78

Weight (kDa)

6.13

Isoelectric Point (pI)

33.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 190
AgsI TTSAA 1 cut(s) 254
AjnI CCWGG 1 cut(s) 73
AluBI AGCT 2 cut(s) 108, 189
AluI AGCT 2 cut(s) 108, 189
ApeKI GCWGC 1 cut(s) 189
AseI ATTAAT 1 cut(s) 99
AsuHPI GGTGA 1 cut(s) 295
BbvI GCAGC 1 cut(s) 176
BciT130I CCWGG 1 cut(s) 75
BfaI CTAG 1 cut(s) 246
BisI GCNGC 1 cut(s) 190
BlsI GCNGC 1 cut(s) 191
Bme1390I CCNGG 1 cut(s) 75
BmiI GGNNCC 1 cut(s) 295
BmrFI CCNGG 1 cut(s) 75
BsaJI CCNNGG 1 cut(s) 73
Bse1I ACTGG 1 cut(s) 127
Bse3DI GCAATG 2 cut(s) 39, 155
BseBI CCWGG 1 cut(s) 75
BseDI CCNNGG 1 cut(s) 73
BseGI GGATG 2 cut(s) 43, 123
BseMI GCAATG 2 cut(s) 39, 155
BseNI ACTGG 1 cut(s) 127
BseXI GCAGC 1 cut(s) 176
BspLI GGNNCC 1 cut(s) 295
BsrDI GCAATG 2 cut(s) 39, 155
BsrI ACTGG 1 cut(s) 127
BssECI CCNNGG 1 cut(s) 73
Bst2UI CCWGG 1 cut(s) 75
BstDEI CTNAG 1 cut(s) 167
BstF5I GGATG 2 cut(s) 43, 123
BstNI CCWGG 1 cut(s) 75
BstSCI CCNGG 1 cut(s) 73
BstV1I GCAGC 1 cut(s) 176
BtsCI GGATG 2 cut(s) 43, 123
BtsIMutI CAGTG 1 cut(s) 214
CviAII CATG 2 cut(s) 172, 225
CviJI RGCY 3 cut(s) 108, 189, 249
CviKI_1 RGCY 3 cut(s) 108, 189, 249
DdeI CTNAG 1 cut(s) 167
Eco57I CTGAAG 1 cut(s) 190
EcoRII CCWGG 1 cut(s) 73
FaeI CATG 2 cut(s) 175, 228
FaiI YATR 5 cut(s) 49, 51, 173, 226, 281
FalI AAGNNNNNCTT 2 cut(s) 188, 220
FatI CATG 2 cut(s) 171, 224
Fnu4HI GCNGC 1 cut(s) 190
FokI GGATG 2 cut(s) 50, 130
Fsp4HI GCNGC 1 cut(s) 190
FspBI CTAG 1 cut(s) 246
GluI GCNGC 1 cut(s) 190
Hin1II CATG 2 cut(s) 175, 228
HinfI GANTC 2 cut(s) 12, 221
HphI GGTGA 1 cut(s) 295
Hpy188I TCNGA 1 cut(s) 105
HpyAV CCTTC 1 cut(s) 307
HpyCH4V TGCA 2 cut(s) 32, 148
HpyF3I CTNAG 1 cut(s) 167
Hsp92II CATG 2 cut(s) 175, 228
LmnI GCTCC 1 cut(s) 186
LpnPI CCDG 4 cut(s) 60, 67, 87, 108
Lsp1109I GCAGC 1 cut(s) 176
MaeI CTAG 1 cut(s) 246
MaeIII GTNAC 1 cut(s) 77
MboII GAAGA 2 cut(s) 101, 196
MluCI AATT 2 cut(s) 180, 254
MnlI CCTC 2 cut(s) 58, 140
MseI TTAA 4 cut(s) 99, 179, 195, 267
MslI CAYNNNNRTG 1 cut(s) 278
MspR9I CCNGG 1 cut(s) 75
MvaI CCWGG 1 cut(s) 75
NlaIII CATG 2 cut(s) 175, 228
NlaIV GGNNCC 1 cut(s) 295
PfeI GAWTC 2 cut(s) 12, 221
PkrI GCNGC 1 cut(s) 191
PshBI ATTAAT 1 cut(s) 99
Psp6I CCWGG 1 cut(s) 73
PspGI CCWGG 1 cut(s) 73
PspN4I GGNNCC 1 cut(s) 295
RseI CAYNNNNRTG 1 cut(s) 278
SaqAI TTAA 4 cut(s) 99, 179, 195, 267
SatI GCNGC 1 cut(s) 190
ScrFI CCNGG 1 cut(s) 75
SetI ASST 2 cut(s) 110, 191
SmiMI CAYNNNNRTG 1 cut(s) 278
Sse9I AATT 2 cut(s) 180, 254
SspMI CTAG 1 cut(s) 246
StyD4I CCNGG 1 cut(s) 73
TasI AATT 2 cut(s) 180, 254
TfiI GAWTC 2 cut(s) 12, 221
Tru1I TTAA 4 cut(s) 99, 179, 195, 267
Tru9I TTAA 4 cut(s) 99, 179, 195, 267
TscAI CASTG 1 cut(s) 214
TseI GCWGC 1 cut(s) 189
TspDTI ATGAA 2 cut(s) 213, 289
TspRI CASTG 1 cut(s) 214
VspI ATTAAT 1 cut(s) 99
XspI CTAG 1 cut(s) 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.