Prupe.3G248600_v2.0.a1

Pollen proteins Ole e I like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0001665
Physical Location & Seq
Reverse (-)
23905962 .. 23907898
1937 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G248600.1

Sequence Viewer

Length: 1398 bp
ATGTCTTGGTTTTTTACAGTACTCTTTTTGATCAGTACTCTCTCACTAAGTACTCCCTCAGAAGCTAGCCATGAGAAGAAGACCCCATCTGCAGTTGTTGTAGGCACTGTCTACTGTGACACATGTTTCCAAGCAGAATTCTCACATGCCAGCCACTTCATTTCAGGGGCTTCTGTTGGTGTTGAATGCAAAGATGGGAGTTCAAAACCAAGTTTCCAGACAGAAGTGAAAACAGATAGCCATGGAGTGTTCAGAGTTCATCTGCCTTTCTCTGTGAGCAAGCATGTCAAGAAAATTGAAGGGTGTTCTGTGAAATTAATCAGCAGCAGTGAACCATATTGTGCTGTGGCCTCAATAGCCACTTCATCTTCACTGCATCTCAAGTCAAGAAAGCAAGGAACACACATTTTCTCAGCTGGGTTCTTCACCTTTAAGCCTCTAAAGCAGCCAAGCCTATGTAACCAAAAACCAAGCATTCAAAACTCCAAGGAATTCAGTTCTCGGAAATTCTCATTTCCTCCAACTGATGAGCTCACATTTCCACCACCAACTCAAAACCCCACAATACCTGATCTTCCATCTCTTCCTACACTCCCTTATCTTCCACCATTGCCACTACTTCCTCCTCTCCCTCCCCTTCCAGGACTTCCAGGAATTCCAGGAATTCCAGTTTTACCCCCCATTCCTGGTAAAACTACAGAGGCAGGGCAACTAACTCAAACCTCCACAATACCTGATCTTTCTCCTCTTCCTACAGTCCCTTTTCTTCCACCATTGCCACAACTTCCTCCTCTCCCTCCCCTTCCAGGACTTCCAGGAATTCCAGGAATTCCAGTTTTACCCCCCATTCCTGGTAAAACTACAGAGGCAGGGCAACTAACTCAAAACTCCACAATACCTGATCTTTCTCCTCTTCCTACAGTCCCTTTTCTTCCACCATTGCCACAACTTCCTCCTCTCCCTCCCCTTCCAGGAATTCCAGGAATTCCAGTTTTACCCCCCATTCCTGGTAAAACTACAGAGGCGGGGCAACTAACTGATAAAAAAGTAGCCCACCCAGATACTTTCTTCCCACCAAACCCATTTCAGCCACCATCAATTTTGCCTCCAAATCCACTTGTGCCACAGCCAACTCCACTTATCCCCAATCCATTTCAGCCTCAACCAGCACCATTAATTCCCAATTTACCCCCAATACCAGGTTTTACTCCACCAGCAGGCCCAACACCATTGATTCCCAACTTGCCACCTATACCTGGTTTTACTGCATCACCATCACCACCACCACCATCTTTCCCACTCCTCCCTCCATTACCATTCCCACTCCCACCTATACCTCGCATCCCTGGAATCCCACCTGCTTTTTCTTCTTCTTCAAAGCAAACTACTTCTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pollen_Ole_e_I

Protein Analysis

466

Amino Acids

49.04

Weight (kDa)

8.83

Isoelectric Point (pI)

60.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1366
Acc36I ACCTGC 1 cut(s) 1366
AccI GTMKAC 1 cut(s) 111
AciI CCGC 1 cut(s) 1025
AcsI RAATTY 9 cut(s) 137, 491, 506, 654, 663, 819, 828, 975, 984
AfaI GTAC 3 cut(s) 21, 37, 52
AfiI CCNNNNNNNGG 9 cut(s) 641, 686, 806, 851, 971, 1007, 1199, 1217, 1256
AflIII ACRYGT 1 cut(s) 122
AgsI TTSAA 5 cut(s) 185, 204, 299, 479, 1377
AluBI AGCT 3 cut(s) 65, 416, 532
AluI AGCT 3 cut(s) 65, 416, 532
Alw21I GWGCWC 1 cut(s) 534
AoxI GGCC 2 cut(s) 348, 1219
ApeKI GCWGC 2 cut(s) 324, 445
ApoI RAATTY 9 cut(s) 137, 491, 506, 654, 663, 819, 828, 975, 984
AseI ATTAAT 2 cut(s) 317, 1175
AspS9I GGNCC 1 cut(s) 1220
AsuHPI GGTGA 3 cut(s) 418, 1263, 1269
AsuNHI GCTAGC 1 cut(s) 65
BanII GRGCYC 1 cut(s) 534
BbsI GAAGAC 1 cut(s) 86
Bbv12I GWGCWC 1 cut(s) 534
BbvI GCAGC 2 cut(s) 336, 457
BccI CCATC 6 cut(s) 94, 188, 586, 1102, 1282, 1297
BclI TGATCA 1 cut(s) 30
BfaI CTAG 1 cut(s) 66
BfmI CTRYAG 6 cut(s) 90, 696, 753, 861, 918, 1017
BfuAI ACCTGC 1 cut(s) 1366
BisI GCNGC 2 cut(s) 325, 446
BlsI GCNGC 2 cut(s) 326, 447
BmcAI AGTACT 3 cut(s) 21, 37, 52
BmgT120I GGNCC 1 cut(s) 1220
BmsI GCATC 3 cut(s) 385, 1277, 1350
BmtI GCTAGC 1 cut(s) 69
BpiI GAAGAC 1 cut(s) 86
BpuEI CTTGAG 1 cut(s) 365
BsaJI CCNNGG 3 cut(s) 241, 486, 1345
BsaXI ACNNNNNCTCC 1 cut(s) 1375
Bsc4I CCNNNNNNNGG 9 cut(s) 641, 686, 806, 851, 971, 1007, 1199, 1217, 1256
Bse1I ACTGG 3 cut(s) 668, 833, 989
Bse3DI GCAATG 3 cut(s) 608, 773, 938
BseDI CCNNGG 3 cut(s) 241, 486, 1345
BseGI GGATG 1 cut(s) 1341
BseLI CCNNNNNNNGG 9 cut(s) 641, 686, 806, 851, 971, 1007, 1199, 1217, 1256
BseMI GCAATG 3 cut(s) 608, 773, 938
BseMII CTCAG 2 cut(s) 72, 426
BseNI ACTGG 3 cut(s) 668, 833, 989
BseRI GAGGAG 6 cut(s) 615, 735, 780, 900, 945, 1292
BseXI GCAGC 2 cut(s) 336, 457
BseYI CCCAGC 1 cut(s) 416
BshFI GGCC 2 cut(s) 350, 1221
BsiHKAI GWGCWC 1 cut(s) 534
BslFI GGGAC 2 cut(s) 743, 908
BslI CCNNNNNNNGG 9 cut(s) 641, 686, 806, 851, 971, 1007, 1199, 1217, 1256
BsmFI GGGAC 2 cut(s) 743, 908
BsmI GAATGC 2 cut(s) 191, 474
BsnI GGCC 2 cut(s) 350, 1221
Bsp1286I GDGCHC 1 cut(s) 534
Bsp143I GATC 4 cut(s) 30, 571, 736, 901
Bsp19I CCATGG 1 cut(s) 241
BspACI CCGC 1 cut(s) 1025
BspANI GGCC 2 cut(s) 350, 1221
BspCNI CTCAG 2 cut(s) 71, 425
BspMAI CTGCAG 1 cut(s) 94
BspMI ACCTGC 1 cut(s) 1366
BspOI GCTAGC 1 cut(s) 69
BsrDI GCAATG 3 cut(s) 608, 773, 938
BsrI ACTGG 3 cut(s) 668, 833, 989
BssECI CCNNGG 3 cut(s) 241, 486, 1345
BssMI GATC 4 cut(s) 30, 571, 736, 901
BssT1I CCWWGG 2 cut(s) 241, 486
Bst4CI ACNGT 5 cut(s) 19, 109, 116, 757, 922
Bst6I CTCTTC 3 cut(s) 588, 753, 918
BstC8I GCNNGC 4 cut(s) 67, 151, 281, 1219
BstDEI CTNAG 3 cut(s) 47, 58, 412
BstDSI CCRYGG 1 cut(s) 241
BstF5I GGATG 1 cut(s) 1341
BstKTI GATC 4 cut(s) 33, 574, 739, 904
BstMBI GATC 4 cut(s) 30, 571, 736, 901
BstMWI GCNNNNNNNGC 2 cut(s) 356, 442
BstNSI RCATGY 3 cut(s) 126, 149, 287
BstSFI CTRYAG 6 cut(s) 90, 696, 753, 861, 918, 1017
BstV1I GCAGC 2 cut(s) 336, 457
BstV2I GAAGAC 1 cut(s) 86
BsuRI GGCC 2 cut(s) 350, 1221
BtgI CCRYGG 1 cut(s) 241
BtsCI GGATG 1 cut(s) 1341
BtsI GCAGTG 2 cut(s) 334, 371
BtsIMutI CAGTG 3 cut(s) 105, 334, 371
BveI ACCTGC 1 cut(s) 1366
Cac8I GCNNGC 4 cut(s) 67, 151, 281, 1219
Cfr13I GGNCC 1 cut(s) 1220
CsiI ACCWGGT 2 cut(s) 1198, 1255
Csp6I GTAC 3 cut(s) 20, 36, 51
CviAII CATG 5 cut(s) 71, 123, 146, 242, 284
CviQI GTAC 3 cut(s) 20, 36, 51
DdeI CTNAG 3 cut(s) 47, 58, 412
DpnI GATC 4 cut(s) 32, 573, 738, 903
DpnII GATC 4 cut(s) 30, 571, 736, 901
Eam1104I CTCTTC 3 cut(s) 588, 753, 918
EarI CTCTTC 3 cut(s) 588, 753, 918
Ecl136II GAGCTC 1 cut(s) 532
Eco130I CCWWGG 2 cut(s) 241, 486
Eco24I GRGCYC 1 cut(s) 534
Eco53kI GAGCTC 1 cut(s) 532
EcoICRI GAGCTC 1 cut(s) 532
EcoRI GAATTC 8 cut(s) 137, 491, 654, 663, 819, 828, 975, 984
EcoT14I CCWWGG 2 cut(s) 241, 486
EcoT38I GRGCYC 1 cut(s) 534
ErhI CCWWGG 2 cut(s) 241, 486
FaeI CATG 5 cut(s) 74, 126, 149, 245, 287
FaiI YATR 9 cut(s) 72, 124, 147, 243, 285, 337, 457, 1253, 1334
FaqI GGGAC 2 cut(s) 743, 908
FatI CATG 5 cut(s) 70, 122, 145, 241, 283
FauI CCCGC 1 cut(s) 1018
FbaI TGATCA 1 cut(s) 30
FblI GTMKAC 1 cut(s) 111
Fnu4HI GCNGC 2 cut(s) 325, 446
FokI GGATG 1 cut(s) 1328
FriOI GRGCYC 1 cut(s) 534
Fsp4HI GCNGC 2 cut(s) 325, 446
FspBI CTAG 1 cut(s) 66
GluI GCNGC 2 cut(s) 325, 446
GsaI CCCAGC 1 cut(s) 420
HaeIII GGCC 2 cut(s) 350, 1221
Hin1II CATG 5 cut(s) 74, 126, 149, 245, 287
HinfI GANTC 2 cut(s) 1234, 1350
HphI GGTGA 3 cut(s) 418, 1263, 1269
Hpy166II GTNNAC 2 cut(s) 112, 332
Hpy188I TCNGA 3 cut(s) 61, 254, 504
Hpy188III TCNNGA 3 cut(s) 217, 289, 387
Hpy8I GTNNAC 2 cut(s) 112, 332
HpyAV CCTTC 4 cut(s) 293, 647, 812, 977
HpyCH4III ACNGT 5 cut(s) 19, 109, 116, 757, 922
HpyCH4V TGCA 4 cut(s) 92, 189, 376, 1268
HpyF10VI GCNNNNNNNGC 2 cut(s) 356, 442
HpyF3I CTNAG 3 cut(s) 47, 58, 412
Hsp92II CATG 5 cut(s) 74, 126, 149, 245, 287
Ksp22I TGATCA 1 cut(s) 30
Kzo9I GATC 4 cut(s) 30, 571, 736, 901
Lsp1109I GCAGC 2 cut(s) 336, 457
LweI GCATC 3 cut(s) 385, 1277, 1350
MabI ACCWGGT 2 cut(s) 1198, 1255
MaeI CTAG 1 cut(s) 66
MaeIII GTNAC 2 cut(s) 116, 458
MalI GATC 4 cut(s) 32, 573, 738, 903
MboI GATC 4 cut(s) 30, 571, 736, 901
MhlI GDGCHC 1 cut(s) 534
MmeI TCCRAC 1 cut(s) 545
MseI TTAA 3 cut(s) 317, 432, 1175
MspA1I CMGCKG 1 cut(s) 416
Mva1269I GAATGC 2 cut(s) 191, 474
MwoI GCNNNNNNNGC 2 cut(s) 356, 442
NcoI CCATGG 1 cut(s) 241
NdeII GATC 4 cut(s) 30, 571, 736, 901
NheI GCTAGC 1 cut(s) 65
NlaIII CATG 5 cut(s) 74, 126, 149, 245, 287
NmuCI GTSAC 1 cut(s) 116
NspI RCATGY 3 cut(s) 126, 149, 287
PaqCI CACCTGC 1 cut(s) 1366
PciI ACATGT 1 cut(s) 122
PctI GAATGC 2 cut(s) 191, 474
PfeI GAWTC 2 cut(s) 1234, 1350
PfoI TCCNGGA 8 cut(s) 640, 649, 658, 805, 814, 823, 970, 979
PkrI GCNGC 2 cut(s) 326, 447
PscI ACATGT 1 cut(s) 122
PshBI ATTAAT 2 cut(s) 317, 1175
Psp124BI GAGCTC 1 cut(s) 534
PspFI CCCAGC 1 cut(s) 416
PspPI GGNCC 1 cut(s) 1220
PstI CTGCAG 1 cut(s) 94
PvuII CAGCTG 1 cut(s) 416
RsaI GTAC 3 cut(s) 21, 37, 52
RsaNI GTAC 3 cut(s) 20, 36, 51
SacI GAGCTC 1 cut(s) 534
SaqAI TTAA 3 cut(s) 317, 432, 1175
SatI GCNGC 2 cut(s) 325, 446
Sau3AI GATC 4 cut(s) 30, 571, 736, 901
Sau96I GGNCC 1 cut(s) 1220
ScaI AGTACT 3 cut(s) 21, 37, 52
SduI GDGCHC 1 cut(s) 534
SexAI ACCWGGT 2 cut(s) 1198, 1255
SfaNI GCATC 3 cut(s) 385, 1277, 1350
SfcI CTRYAG 6 cut(s) 90, 696, 753, 861, 918, 1017
SmlI CTYRAG 1 cut(s) 380
SmoI CTYRAG 1 cut(s) 380
SsiI CCGC 1 cut(s) 1025
SspMI CTAG 1 cut(s) 66
SstI GAGCTC 1 cut(s) 534
StyI CCWWGG 2 cut(s) 241, 486
TaaI ACNGT 5 cut(s) 19, 109, 116, 757, 922
TatI WGTACW 3 cut(s) 19, 35, 50
TfiI GAWTC 2 cut(s) 1234, 1350
Tru1I TTAA 3 cut(s) 317, 432, 1175
Tru9I TTAA 3 cut(s) 317, 432, 1175
TscAI CASTG 3 cut(s) 112, 334, 378
TseFI GTSAC 1 cut(s) 116
TseI GCWGC 2 cut(s) 324, 445
Tsp45I GTSAC 1 cut(s) 116
TspDTI ATGAA 3 cut(s) 148, 248, 354
TspRI CASTG 3 cut(s) 112, 334, 378
VspI ATTAAT 2 cut(s) 317, 1175
XapI RAATTY 9 cut(s) 137, 491, 506, 654, 663, 819, 828, 975, 984
XceI RCATGY 3 cut(s) 126, 149, 287
XmiI GTMKAC 1 cut(s) 111
XspI CTAG 1 cut(s) 66
ZrmI AGTACT 3 cut(s) 21, 37, 52
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.