Rmu_sc0006207.1_g000006

Pollen proteins Ole e I like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006207.1
OG0001665
Physical Location & Seq
Reverse (-)
27286 .. 29061
1776 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006207.1_g000006.1.cds

Sequence Viewer

Length: 1647 bp
atgtcttggtttctaaccatattccttctcattagtctagcatttatcactccttcagagggtaaccatgaggagaaggttcaatctgccgttgttataggcaaagtatactgtgatacatgcttccaagacgggttcgcgaaaactagccacttcatttctggggcctctgttggtgtggagtgcaaagatgagagttcgtcgaaaccaagttttcaagcacaagtgaaaacagataaccaaggagtgttcaaagtccacttgcctttctcagtaagcaaacatgtgaaggaaattgaagggtgttctgtgaagctaatcagcagcagtgaaccccactgtgctgtggcctcaacagcagcctcatatttgcttcccctcaagtccaggaagcaaggaacacacattttctcagctgggttttttgccttcaagcccctaaagcaaggcaacctatgtaaccaaaaatcaagctccaacaagctgccattttcctcaccaattcaacaacaagacatattgggaattggacttccaggtcttccaggactaccaggtttgccgggacttccaggtctacctggacttccgggtcttccaggactcccaggacttccaggaatcggagctcagccagagcaaataccagagtccaaatctgaaaccaaaactgctacttctaagggagagaggcacctacttgtcctgggtcttccgggtcttccaggactcccaggacttccaggacttccaggacttccaggactcccaggacttccaggacttccaggacttccaggactcccaggacttccaggacttccaggacttccaggactcccaggacttccaggacttccaggacttccaggactcccaggacttccaggacttccaggacttccaggactcccaggacttccaggacttccaggacttccaggactcccaggacttccaggacttccaggacttccaggactcccaggtctcccaggacttccaggaatcggagctcagccagagcaaataccagagtccaaatctgaaaccaaaactactacttctaaggtagagaggcacctaattggccttggtcttccgggactgcctggacttccaggtcttcctggacttccaggaatcggagctcagccagagcaaataccggagtccaaatctgaaaccaaaactgctacttctaagggagagaggcacctacttgtcctgggtcttccgggccttccaggactcccaggacttccaggaatcggagctcagccagagcaattaccagagtctaatgctgaaaccaaaactgctacttcgaagggagagaggcacctgcttgtcctgggtcttccgggccttccaggactcccaggtctcccaggtcttccaggacttccaggaatcggagctcagccagagcaaataccagagtccaaatctgaaaccaaaactgttacttctaagggagagaggcacctacttgtcctgggtctgccgggtcttccaggactcccaggacttccaggactcccaggtcttccaggacttccaggaatcggagcccgcacagaaaaaattacagagaaaaatgatgatggagcccaggccgtcccacttgcttcttcttctccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pollen_Ole_e_I

Protein Analysis

548

Amino Acids

55.16

Weight (kDa)

8.13

Isoelectric Point (pI)

55.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1353
AasI GACNNNNNNGTC 7 cut(s) 537, 573, 591, 987, 1122, 1383, 1545
Acc36I ACCTGC 1 cut(s) 1353
AccB1I GGYRCC 5 cut(s) 693, 1080, 1215, 1341, 1485
AccI GTMKAC 2 cut(s) 108, 577
AccII CGCG 1 cut(s) 140
AciI CCGC 1 cut(s) 1576
AcuI CTGAAG 1 cut(s) 39
AfiI CCNNNNNNNGG 7 cut(s) 59, 623, 1010, 1145, 1271, 1415, 1568
AflIII ACRYGT 1 cut(s) 283
AgsI TTSAA 6 cut(s) 83, 218, 253, 299, 433, 506
AluBI AGCT 9 cut(s) 316, 416, 474, 484, 629, 1016, 1151, 1277, 1421
AluI AGCT 9 cut(s) 316, 416, 474, 484, 629, 1016, 1151, 1277, 1421
Alw21I GWGCWC 5 cut(s) 631, 1018, 1153, 1279, 1423
Alw26I GTCTC 2 cut(s) 995, 1391
AoxI GGCC 6 cut(s) 165, 348, 1090, 1240, 1366, 1617
ApeKI GCWGC 3 cut(s) 324, 359, 484
AspS9I GGNCC 3 cut(s) 165, 1240, 1366
AsuC2I CCSGG 7 cut(s) 564, 591, 717, 1104, 1239, 1365, 1509
AsuHPI GGTGA 1 cut(s) 489
AsuII TTCGAA 1 cut(s) 1328
BanI GGYRCC 5 cut(s) 693, 1080, 1215, 1341, 1485
BanII GRGCYC 7 cut(s) 631, 1018, 1153, 1279, 1423, 1576, 1615
Bbv12I GWGCWC 5 cut(s) 631, 1018, 1153, 1279, 1423
BbvI GCAGC 3 cut(s) 336, 371, 471
BccI CCATC 1 cut(s) 1601
BceAI ACGGC 2 cut(s) 74, 1604
BcnI CCSGG 7 cut(s) 564, 591, 717, 1104, 1239, 1365, 1509
BcoDI GTCTC 2 cut(s) 995, 1391
BfaI CTAG 2 cut(s) 38, 147
BfuAI ACCTGC 1 cut(s) 1353
BisI GCNGC 3 cut(s) 325, 360, 485
BlpI GCTNAGC 5 cut(s) 630, 1017, 1152, 1278, 1422
BlsI GCNGC 3 cut(s) 326, 361, 486
BmgT120I GGNCC 3 cut(s) 165, 1240, 1366
BmiI GGNNCC 8 cut(s) 166, 695, 1082, 1217, 1343, 1487, 1573, 1612
Bpu1102I GCTNAGC 5 cut(s) 630, 1017, 1152, 1278, 1422
Bpu14I TTCGAA 1 cut(s) 1328
BpuEI CTTGAG 1 cut(s) 365
BpuMI CCSGG 7 cut(s) 564, 591, 717, 1104, 1239, 1365, 1509
BsaI GGTCTC 2 cut(s) 995, 1391
BsaWI WCCGGW 1 cut(s) 1168
Bsc4I CCNNNNNNNGG 7 cut(s) 59, 623, 1010, 1145, 1271, 1415, 1568
BseLI CCNNNNNNNGG 7 cut(s) 59, 623, 1010, 1145, 1271, 1415, 1568
BseMII CTCAG 7 cut(s) 285, 426, 644, 1031, 1166, 1292, 1436
BseRI GAGGAG 1 cut(s) 86
BseXI GCAGC 3 cut(s) 336, 371, 471
BseYI CCCAGC 1 cut(s) 416
Bsh1236I CGCG 1 cut(s) 140
BshFI GGCC 6 cut(s) 167, 350, 1092, 1242, 1368, 1619
BshNI GGYRCC 5 cut(s) 693, 1080, 1215, 1341, 1485
BsiHKAI GWGCWC 5 cut(s) 631, 1018, 1153, 1279, 1423
BsiSI CCGG 8 cut(s) 563, 590, 716, 1103, 1169, 1238, 1364, 1508
BslFI GGGAC 3 cut(s) 579, 1119, 1607
BslI CCNNNNNNNGG 7 cut(s) 59, 623, 1010, 1145, 1271, 1415, 1568
BsmAI GTCTC 2 cut(s) 995, 1391
BsmFI GGGAC 3 cut(s) 579, 1119, 1607
BsnI GGCC 6 cut(s) 167, 350, 1092, 1242, 1368, 1619
Bso31I GGTCTC 2 cut(s) 995, 1391
Bsp119I TTCGAA 1 cut(s) 1328
Bsp1286I GDGCHC 7 cut(s) 631, 1018, 1153, 1279, 1423, 1576, 1615
Bsp1720I GCTNAGC 5 cut(s) 630, 1017, 1152, 1278, 1422
Bsp68I TCGCGA 1 cut(s) 140
BspACI CCGC 1 cut(s) 1576
BspANI GGCC 6 cut(s) 167, 350, 1092, 1242, 1368, 1619
BspCNI CTCAG 7 cut(s) 284, 425, 643, 1030, 1165, 1291, 1435
BspFNI CGCG 1 cut(s) 140
BspLI GGNNCC 8 cut(s) 166, 695, 1082, 1217, 1343, 1487, 1573, 1612
BspMI ACCTGC 1 cut(s) 1353
BspT104I TTCGAA 1 cut(s) 1328
BspT107I GGYRCC 5 cut(s) 693, 1080, 1215, 1341, 1485
BspTNI GGTCTC 2 cut(s) 995, 1391
BssNAI GTATAC 1 cut(s) 109
BssT1I CCWWGG 2 cut(s) 241, 1093
Bst1107I GTATAC 1 cut(s) 109
Bst4CI ACNGT 3 cut(s) 113, 341, 1465
BstBI TTCGAA 1 cut(s) 1328
BstC8I GCNNGC 1 cut(s) 1576
BstEII GGTNACC 1 cut(s) 62
BstFNI CGCG 1 cut(s) 140
BstMAI GTCTC 2 cut(s) 995, 1391
BstMWI GCNNNNNNNGC 2 cut(s) 356, 442
BstNSI RCATGY 2 cut(s) 123, 287
BstPI GGTNACC 1 cut(s) 62
BstUI CGCG 1 cut(s) 140
BstV1I GCAGC 3 cut(s) 336, 371, 471
BstZ17I GTATAC 1 cut(s) 109
BsuRI GGCC 6 cut(s) 167, 350, 1092, 1242, 1368, 1619
BtsI GCAGTG 1 cut(s) 334
BtsIMutI CAGTG 2 cut(s) 334, 337
BtuMI TCGCGA 1 cut(s) 140
BveI ACCTGC 1 cut(s) 1353
Cac8I GCNNGC 1 cut(s) 1576
Cfr13I GGNCC 3 cut(s) 165, 1240, 1366
CsiI ACCWGGT 1 cut(s) 553
CviAII CATG 3 cut(s) 68, 120, 284
DrdI GACNNNNNNGTC 7 cut(s) 537, 573, 591, 987, 1122, 1383, 1545
DseDI GACNNNNNNGTC 7 cut(s) 537, 573, 591, 987, 1122, 1383, 1545
Ecl136II GAGCTC 5 cut(s) 629, 1016, 1151, 1277, 1421
Eco130I CCWWGG 2 cut(s) 241, 1093
Eco24I GRGCYC 7 cut(s) 631, 1018, 1153, 1279, 1423, 1576, 1615
Eco31I GGTCTC 2 cut(s) 995, 1391
Eco53kI GAGCTC 5 cut(s) 629, 1016, 1151, 1277, 1421
Eco57I CTGAAG 1 cut(s) 39
Eco91I GGTNACC 1 cut(s) 62
EcoICRI GAGCTC 5 cut(s) 629, 1016, 1151, 1277, 1421
EcoO109I RGGNCCY 1 cut(s) 165
EcoO65I GGTNACC 1 cut(s) 62
EcoT14I CCWWGG 2 cut(s) 241, 1093
EcoT38I GRGCYC 7 cut(s) 631, 1018, 1153, 1279, 1423, 1576, 1615
ErhI CCWWGG 2 cut(s) 241, 1093
FaeI CATG 3 cut(s) 71, 123, 287
FaiI YATR 9 cut(s) 20, 69, 98, 109, 121, 285, 367, 457, 518
FaqI GGGAC 3 cut(s) 579, 1119, 1607
FatI CATG 3 cut(s) 67, 119, 283
FauI CCCGC 1 cut(s) 1583
FblI GTMKAC 2 cut(s) 108, 577
Fnu4HI GCNGC 3 cut(s) 325, 360, 485
FriOI GRGCYC 7 cut(s) 631, 1018, 1153, 1279, 1423, 1576, 1615
Fsp4HI GCNGC 3 cut(s) 325, 360, 485
FspBI CTAG 2 cut(s) 38, 147
GluI GCNGC 3 cut(s) 325, 360, 485
GsaI CCCAGC 1 cut(s) 420
HaeIII GGCC 6 cut(s) 167, 350, 1092, 1242, 1368, 1619
HapII CCGG 8 cut(s) 563, 590, 716, 1103, 1169, 1238, 1364, 1508
Hin1II CATG 3 cut(s) 71, 123, 287
HpaII CCGG 8 cut(s) 563, 590, 716, 1103, 1169, 1238, 1364, 1508
HphI GGTGA 1 cut(s) 489
Hpy166II GTNNAC 4 cut(s) 109, 259, 332, 578
Hpy188III TCNNGA 1 cut(s) 139
Hpy8I GTNNAC 4 cut(s) 109, 259, 332, 578
Hpy99I CGWCG 1 cut(s) 205
HpyAV CCTTC 9 cut(s) 35, 63, 70, 283, 293, 439, 1253, 1324, 1379
HpyCH4III ACNGT 3 cut(s) 113, 341, 1465
HpyCH4V TGCA 1 cut(s) 186
HpyF10VI GCNNNNNNNGC 2 cut(s) 356, 442
Hsp92II CATG 3 cut(s) 71, 123, 287
LmnI GCTCC 8 cut(s) 479, 626, 1013, 1148, 1274, 1418, 1571, 1610
Lsp1109I GCAGC 3 cut(s) 336, 371, 471
MabI ACCWGGT 1 cut(s) 553
MaeI CTAG 2 cut(s) 38, 147
MaeIII GTNAC 3 cut(s) 62, 458, 1465
MhlI GDGCHC 7 cut(s) 631, 1018, 1153, 1279, 1423, 1576, 1615
MluCI AATT 6 cut(s) 294, 501, 525, 1086, 1289, 1587
MmeI TCCRAC 1 cut(s) 501
MspA1I CMGCKG 1 cut(s) 416
MspI CCGG 8 cut(s) 563, 590, 716, 1103, 1169, 1238, 1364, 1508
MvnI CGCG 1 cut(s) 140
MwoI GCNNNNNNNGC 2 cut(s) 356, 442
NciI CCSGG 7 cut(s) 564, 591, 717, 1104, 1239, 1365, 1509
NlaIII CATG 3 cut(s) 71, 123, 287
NlaIV GGNNCC 8 cut(s) 166, 695, 1082, 1217, 1343, 1487, 1573, 1612
NruI TCGCGA 1 cut(s) 140
NspI RCATGY 2 cut(s) 123, 287
NspV TTCGAA 1 cut(s) 1328
PaqCI CACCTGC 1 cut(s) 1353
PciI ACATGT 1 cut(s) 283
PfeI GAWTC 6 cut(s) 621, 1008, 1143, 1269, 1413, 1566
PkrI GCNGC 3 cut(s) 326, 361, 486
PscI ACATGT 1 cut(s) 283
Psp124BI GAGCTC 5 cut(s) 631, 1018, 1153, 1279, 1423
PspEI GGTNACC 1 cut(s) 62
PspFI CCCAGC 1 cut(s) 416
PspN4I GGNNCC 8 cut(s) 166, 695, 1082, 1217, 1343, 1487, 1573, 1612
PspPI GGNCC 3 cut(s) 165, 1240, 1366
PvuII CAGCTG 1 cut(s) 416
RruI TCGCGA 1 cut(s) 140
SacI GAGCTC 5 cut(s) 631, 1018, 1153, 1279, 1423
SatI GCNGC 3 cut(s) 325, 360, 485
Sau96I GGNCC 3 cut(s) 165, 1240, 1366
SduI GDGCHC 7 cut(s) 631, 1018, 1153, 1279, 1423, 1576, 1615
SexAI ACCWGGT 1 cut(s) 553
SfuI TTCGAA 1 cut(s) 1328
SmlI CTYRAG 1 cut(s) 380
SmoI CTYRAG 1 cut(s) 380
Sse9I AATT 6 cut(s) 294, 501, 525, 1086, 1289, 1587
SsiI CCGC 1 cut(s) 1576
SspMI CTAG 2 cut(s) 38, 147
SstI GAGCTC 5 cut(s) 631, 1018, 1153, 1279, 1423
StyI CCWWGG 2 cut(s) 241, 1093
TaaI ACNGT 3 cut(s) 113, 341, 1465
TaqI TCGA 2 cut(s) 203, 1328
TasI AATT 6 cut(s) 294, 501, 525, 1086, 1289, 1587
TfiI GAWTC 6 cut(s) 621, 1008, 1143, 1269, 1413, 1566
TscAI CASTG 2 cut(s) 334, 344
TseI GCWGC 3 cut(s) 324, 359, 484
TspDTI ATGAA 1 cut(s) 145
TspRI CASTG 2 cut(s) 334, 344
XceI RCATGY 2 cut(s) 123, 287
XcmI CCANNNNNNNNNTGG 1 cut(s) 158
XmiI GTMKAC 2 cut(s) 108, 577
XspI CTAG 2 cut(s) 38, 147
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.