Prupe.3G248700_v2.0.a1

Pollen proteins Ole e I like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0001665
Physical Location & Seq
Reverse (-)
23917074 .. 23918539
1466 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G248700.1

Sequence Viewer

Length: 987 bp
ATGTCTTGGTTTTTTACACTACTCTTTTTGATCAGTTCTCTCTCATTGACTACTCCCTCAGAAGCTAGCCATGAGAAGAAGCCCCCATCTGCAGTTGTTGTAGGCACTGTCTACTGTGACACATGTTTCCAAGCCGAATTCTCACATGCCAGCCACTTCATTTCAGGGGCTTCTGTTGGTGTAGAATGCAAAGATGGGAGTTCAAAACCAAGTTTCCAGACAGAAGTGAAAACAGATAGCCATGGAGTGTTCAGAGTCCATTTGCCTTTCTCTGTGAGCAAGCGTGTCAAGAAAATTGAAGGGTGTTCTGTGAAATTAATCAGCAGCAGTGAACCATATTGTGCTGTGTCCTCAACAGCCACTTCATCTTCACTGCATCTCAAGTCAAGTGAGCAAGGAACATATATATTCTCAGCTGGTTTCTTCACCTTCAAGCCTCTAAAGCAGCCAAGCCTCTGTAACCAAAAACCAAGCATTCCAAACTCCAAGGAATTCAGTTCTCAGAAATCTTCATTTCCAGGAATTCCAGTTACATCCCCCTTTCCTGGTAAAACTACGAAGGCAGGGCAACTAACTGATAAAAAAGTAGGACTTCCAGGACTCCCAGGAACAGGACTTCCAGGACTCCCAGGACTTCCAGGAATTCCACAATTAACCCCCTTTACTGGTAAAAATACAAAGGGAGGGCAACTAACTGACAAAAAATTATTAGGACTTCCGGGACTGCCAGGACTTCCGGGACTGCCGGGACTTCCAGGACTTCCGGGACTTCCAGGACTTCCGGGACTTCCAGGACTCCCAGGACTTCCTGGACTTCCAGGACTAGGAAAGGCAGGGCAACTAAATGATAAAAAAGTAGCTCGCCCAGATACTTCCTTCACAACACCACAAATTCCAAAAACAAGTTTGCCTCCAAATCCATCACCACCAACATCTCGCATTCCTGGAATCCCACGGGCTTCTTCAAAGCAAACTACTTCTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pollen_Ole_e_I

Protein Analysis

329

Amino Acids

34.06

Weight (kDa)

9.73

Isoelectric Point (pI)

43.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 111
AcsI RAATTY 5 cut(s) 137, 491, 522, 642, 891
AfiI CCNNNNNNNGG 4 cut(s) 545, 611, 665, 824
AflIII ACRYGT 1 cut(s) 122
AgsI TTSAA 4 cut(s) 204, 299, 433, 966
AloI GAACNNNNNNTCC 2 cut(s) 601, 633
AluBI AGCT 3 cut(s) 65, 416, 860
AluI AGCT 3 cut(s) 65, 416, 860
ApeKI GCWGC 2 cut(s) 324, 445
ApoI RAATTY 5 cut(s) 137, 491, 522, 642, 891
AseI ATTAAT 1 cut(s) 317
AsuC2I CCSGG 5 cut(s) 720, 738, 747, 765, 783
AsuHPI GGTGA 2 cut(s) 418, 915
AsuNHI GCTAGC 1 cut(s) 65
BbvI GCAGC 2 cut(s) 336, 457
BccI CCATC 3 cut(s) 94, 188, 928
BclI TGATCA 1 cut(s) 30
BcnI CCSGG 5 cut(s) 720, 738, 747, 765, 783
BfaI CTAG 2 cut(s) 66, 824
BfmI CTRYAG 1 cut(s) 90
BisI GCNGC 2 cut(s) 325, 446
BlsI GCNGC 2 cut(s) 326, 447
BmsI GCATC 1 cut(s) 385
BmtI GCTAGC 1 cut(s) 69
BpuEI CTTGAG 1 cut(s) 365
BpuMI CCSGG 5 cut(s) 720, 738, 747, 765, 783
BsaJI CCNNGG 6 cut(s) 241, 486, 604, 628, 799, 953
BsaXI ACNNNNNCTCC 1 cut(s) 964
Bsc4I CCNNNNNNNGG 4 cut(s) 545, 611, 665, 824
Bse1I ACTGG 2 cut(s) 527, 670
BseDI CCNNGG 6 cut(s) 241, 486, 604, 628, 799, 953
BseGI GGATG 1 cut(s) 533
BseLI CCNNNNNNNGG 4 cut(s) 545, 611, 665, 824
BseMII CTCAG 3 cut(s) 72, 426, 515
BseNI ACTGG 2 cut(s) 527, 670
BseXI GCAGC 2 cut(s) 336, 457
BsiSI CCGG 5 cut(s) 719, 737, 746, 764, 782
BslFI GGGAC 5 cut(s) 735, 753, 762, 780, 798
BslI CCNNNNNNNGG 4 cut(s) 545, 611, 665, 824
BsmFI GGGAC 5 cut(s) 735, 753, 762, 780, 798
BsmI GAATGC 3 cut(s) 191, 474, 939
Bsp143I GATC 1 cut(s) 30
Bsp19I CCATGG 1 cut(s) 241
BspCNI CTCAG 3 cut(s) 71, 425, 514
BspMAI CTGCAG 1 cut(s) 94
BspOI GCTAGC 1 cut(s) 69
BsrI ACTGG 2 cut(s) 527, 670
BssECI CCNNGG 6 cut(s) 241, 486, 604, 628, 799, 953
BssMI GATC 1 cut(s) 30
BssT1I CCWWGG 2 cut(s) 241, 486
Bst4CI ACNGT 2 cut(s) 109, 116
BstC8I GCNNGC 4 cut(s) 67, 151, 281, 862
BstDEI CTNAG 3 cut(s) 58, 412, 501
BstDSI CCRYGG 2 cut(s) 241, 953
BstF5I GGATG 1 cut(s) 533
BstKTI GATC 1 cut(s) 33
BstMBI GATC 1 cut(s) 30
BstMWI GCNNNNNNNGC 1 cut(s) 442
BstNSI RCATGY 2 cut(s) 126, 149
BstSFI CTRYAG 1 cut(s) 90
BstV1I GCAGC 2 cut(s) 336, 457
BtgI CCRYGG 2 cut(s) 241, 953
BtsCI GGATG 1 cut(s) 533
BtsI GCAGTG 2 cut(s) 334, 371
BtsIMutI CAGTG 3 cut(s) 105, 334, 371
Cac8I GCNNGC 4 cut(s) 67, 151, 281, 862
CviAII CATG 4 cut(s) 71, 123, 146, 242
DdeI CTNAG 3 cut(s) 58, 412, 501
DpnI GATC 1 cut(s) 32
DpnII GATC 1 cut(s) 30
Eco130I CCWWGG 2 cut(s) 241, 486
EcoRI GAATTC 4 cut(s) 137, 491, 522, 642
EcoT14I CCWWGG 2 cut(s) 241, 486
ErhI CCWWGG 2 cut(s) 241, 486
FaeI CATG 4 cut(s) 74, 126, 149, 245
FaiI YATR 8 cut(s) 72, 124, 147, 243, 337, 403, 405, 407
FalI AAGNNNNNCTT 2 cut(s) 576, 608
FaqI GGGAC 5 cut(s) 735, 753, 762, 780, 798
FatI CATG 4 cut(s) 70, 122, 145, 241
FbaI TGATCA 1 cut(s) 30
FblI GTMKAC 1 cut(s) 111
Fnu4HI GCNGC 2 cut(s) 325, 446
FokI GGATG 1 cut(s) 520
Fsp4HI GCNGC 2 cut(s) 325, 446
FspBI CTAG 2 cut(s) 66, 824
GluI GCNGC 2 cut(s) 325, 446
HapII CCGG 5 cut(s) 719, 737, 746, 764, 782
Hin1II CATG 4 cut(s) 74, 126, 149, 245
HinfI GANTC 5 cut(s) 255, 600, 624, 795, 948
HpaII CCGG 5 cut(s) 719, 737, 746, 764, 782
HphI GGTGA 2 cut(s) 418, 915
Hpy166II GTNNAC 2 cut(s) 112, 332
Hpy188I TCNGA 3 cut(s) 61, 254, 504
Hpy188III TCNNGA 2 cut(s) 217, 289
Hpy8I GTNNAC 2 cut(s) 112, 332
HpyAV CCTTC 4 cut(s) 293, 439, 553, 886
HpyCH4III ACNGT 2 cut(s) 109, 116
HpyCH4V TGCA 3 cut(s) 92, 189, 376
HpyF10VI GCNNNNNNNGC 1 cut(s) 442
HpyF3I CTNAG 3 cut(s) 58, 412, 501
Hsp92II CATG 4 cut(s) 74, 126, 149, 245
Ksp22I TGATCA 1 cut(s) 30
Kzo9I GATC 1 cut(s) 30
Lsp1109I GCAGC 2 cut(s) 336, 457
LweI GCATC 1 cut(s) 385
MaeI CTAG 2 cut(s) 66, 824
MaeIII GTNAC 3 cut(s) 116, 458, 529
MalI GATC 1 cut(s) 32
MboI GATC 1 cut(s) 30
MboII GAAGA 5 cut(s) 88, 360, 415, 501, 954
MluCI AATT 9 cut(s) 137, 294, 314, 491, 522, 642, 650, 704, 891
MlyI GAGTC 4 cut(s) 264, 594, 618, 789
MnlI CCTC 6 cut(s) 67, 361, 447, 464, 677, 921
MseI TTAA 2 cut(s) 317, 653
MspA1I CMGCKG 1 cut(s) 416
MspI CCGG 5 cut(s) 719, 737, 746, 764, 782
Mva1269I GAATGC 3 cut(s) 191, 474, 939
MwoI GCNNNNNNNGC 1 cut(s) 442
NciI CCSGG 5 cut(s) 720, 738, 747, 765, 783
NcoI CCATGG 1 cut(s) 241
NdeII GATC 1 cut(s) 30
NheI GCTAGC 1 cut(s) 65
NlaIII CATG 4 cut(s) 74, 126, 149, 245
NmuCI GTSAC 1 cut(s) 116
NspI RCATGY 2 cut(s) 126, 149
PciI ACATGT 1 cut(s) 122
PctI GAATGC 3 cut(s) 191, 474, 939
PfeI GAWTC 1 cut(s) 948
PkrI GCNGC 2 cut(s) 326, 447
PleI GAGTC 4 cut(s) 263, 594, 618, 789
PpsI GAGTC 4 cut(s) 263, 594, 618, 789
PscI ACATGT 1 cut(s) 122
PshBI ATTAAT 1 cut(s) 317
PstI CTGCAG 1 cut(s) 94
PvuII CAGCTG 1 cut(s) 416
SaqAI TTAA 2 cut(s) 317, 653
SatI GCNGC 2 cut(s) 325, 446
Sau3AI GATC 1 cut(s) 30
SchI GAGTC 4 cut(s) 264, 594, 618, 789
SetI ASST 4 cut(s) 67, 418, 431, 862
SfaNI GCATC 1 cut(s) 385
SfcI CTRYAG 1 cut(s) 90
SmlI CTYRAG 1 cut(s) 380
SmoI CTYRAG 1 cut(s) 380
Sse9I AATT 9 cut(s) 137, 294, 314, 491, 522, 642, 650, 704, 891
SspMI CTAG 2 cut(s) 66, 824
StyI CCWWGG 2 cut(s) 241, 486
TaaI ACNGT 2 cut(s) 109, 116
TasI AATT 9 cut(s) 137, 294, 314, 491, 522, 642, 650, 704, 891
TfiI GAWTC 1 cut(s) 948
Tru1I TTAA 2 cut(s) 317, 653
Tru9I TTAA 2 cut(s) 317, 653
TscAI CASTG 3 cut(s) 112, 334, 378
TseFI GTSAC 1 cut(s) 116
TseI GCWGC 2 cut(s) 324, 445
Tsp45I GTSAC 1 cut(s) 116
TspDTI ATGAA 3 cut(s) 148, 354, 501
TspRI CASTG 3 cut(s) 112, 334, 378
VspI ATTAAT 1 cut(s) 317
XapI RAATTY 5 cut(s) 137, 491, 522, 642, 891
XceI RCATGY 2 cut(s) 126, 149
XmiI GTMKAC 1 cut(s) 111
XspI CTAG 2 cut(s) 66, 824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.