Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0001028

Physical Location & Seq

Genomic Coordinates Forward (+)

10437541 .. 10437909

Gene Structure 369 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G094300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 345 bp

ATGGACTTTAGTCCCACGGACAATGGATGCACTAGAGGGATACAATGCACGGCTGATATTAATGGGCAGTGTCCTAACGAATTGAAGGCTCAAGGAGGCTGCAACAACCCTTGCACTGTGTTTAAAACTGATCAATATTGCTGCAATAATTCTGGGAGCTGTGGCCCTACAGACTTCTCTAGATTTTTCAAGGTTCGGTGCCCGGATGCTTATAGTTACCCCGAGGATGACCAAACCAGCACATTTACATGCCCTACTGGGACTAACTATAGGGTTGTGTTCTGCCCTAATGACCCTACATGTCTAGTCAGCATATTAGATCAAATGTATCATGTGGCCTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002831 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0031341 GO:0031343 GO:0031347 GO:0032101 GO:0040008 GO:0042268 GO:0043207 GO:0043900 GO:0043901 GO:0043902 GO:0043903 GO:0044126 GO:0044130 GO:0044144 GO:0044146 GO:0045919 GO:0045926 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051709 GO:0051710 GO:0051712 GO:0051714 GO:0051802 GO:0051804 GO:0051839 GO:0051841 GO:0065007 GO:0080134 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Thaumatin

Protein Analysis

115

Amino Acids

12.53

Weight (kDa)

4.44

Isoelectric Point (pI)

32.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001028)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11650
fragaria_vesca	FvH4_3g09590 FvH4_5g01820 FvH4_5g01830 FvH4_5g01840
malus_domestica	MD04G1064100.v1.1 MD04G1064200.v1.1 MD04G1064400.v1.1
prunus_persica	Prupe.2G053000_v2.0.a1 Prupe.5G093500_v2.0.a1 Prupe.5G093600_v2.0.a1 Prupe.5G093800_v2.0.a1 Prupe.5G094200_v2.0.a1 Prupe.5G094300_v2.0.a1
pyrus_communis	pycom04g05790 pycom04g05800 pycom04g05820 pycom07g19440 pycom09g10580 pycom10g02510
rosa_chinensis	RchiOBHm_Chr2g0137431 RchiOBHm_Chr2g0137461 RchiOBHm_Chr7g0198711 RchiOBHm_Chr7g0198721 RchiOBHm_Chr7g0198751 RchiOBHm_Chr7g0198781
rosa_laevigata	RLG00000003839 RLG00000003842 RLG00000003844
rosa_multiflora	Rmu_co8259601.1_g000001 Rmu_sc0000220.1_g000002 Rmu_sc0000220.1_g000005 Rmu_sc0000765.1_g000003 Rmu_ssc0000312.1_g000012
rosa_roxburghii	Rroxscaffold_2G00107060 Rroxscaffold_3G00257410 Rroxscaffold_3G00257460 Rroxscaffold_3G00257480 Rroxscaffold_3G00257490
rosa_rugosa	Rorug02G0342600 Rorug07G0049900 Rorug07G0050000 Rorug07G0050000 Rorug07G0050100
rosa_samantha	Rh2BG397900 Rh2DG413200 Rh7AG173300 Rh7AG173400 Rh7AG173500 Rh7AG173600 Rh7BG176700 Rh7BG176800 Rh7BG176900 Rh7CG182700 Rh7CG182800 Rh7DG176000 Rh7DG176100 Rh7DG176200
rosa_wichuraiana	Rw7G015180 Rw7G015190 Rw7G015200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	198
AflIII	ACRYGT	1 cut(s)	299
AgsI	TTSAA	2 cut(s)	85, 190
AluBI	AGCT	1 cut(s)	159
AluI	AGCT	1 cut(s)	159
Ama87I	CYCGRG	1 cut(s)	221
AoxI	GGCC	2 cut(s)	163, 336
ApeKI	GCWGC	2 cut(s)	99, 141
AseI	ATTAAT	1 cut(s)	60
AspS9I	GGNCC	1 cut(s)	164
AsuC2I	CCSGG	1 cut(s)	203
AvaI	CYCGRG	1 cut(s)	221
BaeGI	GKGCMC	1 cut(s)	203
BanI	GGYRCC	1 cut(s)	198
BbvI	GCAGC	2 cut(s)	86, 128
BceAI	ACGGC	1 cut(s)	66
BciVI	GTATCC	1 cut(s)	33
BclI	TGATCA	1 cut(s)	130
BcnI	CCSGG	1 cut(s)	203
BfaI	CTAG	3 cut(s)	33, 180, 305
BfmI	CTRYAG	2 cut(s)	168, 268
BfuI	GTATCC	1 cut(s)	33
BisI	GCNGC	2 cut(s)	100, 142
BlsI	GCNGC	2 cut(s)	101, 143
Bme1390I	CCNGG	1 cut(s)	203
BmeT110I	CYCGRG	1 cut(s)	221
BmgT120I	GGNCC	1 cut(s)	164
BmiI	GGNNCC	1 cut(s)	200
BmrFI	CCNGG	1 cut(s)	203
BmrI	ACTGGG	1 cut(s)	267
BmsI	GCATC	2 cut(s)	17, 196
BmuI	ACTGGG	1 cut(s)	267
BoxI	GACNNNNGTC	1 cut(s)	9
BpuEI	CTTGAG	1 cut(s)	75
BpuMI	CCSGG	1 cut(s)	203
BsaJI	CCNNGG	2 cut(s)	15, 222
Bse1I	ACTGG	1 cut(s)	262
BseDI	CCNNGG	2 cut(s)	15, 222
BseGI	GGATG	3 cut(s)	32, 211, 232
BseNI	ACTGG	1 cut(s)	262
BseSI	GKGCMC	1 cut(s)	203
BseXI	GCAGC	2 cut(s)	86, 128
BshFI	GGCC	2 cut(s)	165, 338
BshNI	GGYRCC	1 cut(s)	198
BsiHKCI	CYCGRG	1 cut(s)	221
BsiSI	CCGG	1 cut(s)	203
BslFI	GGGAC	1 cut(s)	274
BsmFI	GGGAC	1 cut(s)	274
BsnI	GGCC	2 cut(s)	165, 338
BsoBI	CYCGRG	1 cut(s)	221
Bsp1286I	GDGCHC	1 cut(s)	203
Bsp143I	GATC	2 cut(s)	130, 319
BspANI	GGCC	2 cut(s)	165, 338
BspLI	GGNNCC	1 cut(s)	200
BspT107I	GGYRCC	1 cut(s)	198
BsrI	ACTGG	1 cut(s)	262
BssECI	CCNNGG	2 cut(s)	15, 222
BssMI	GATC	2 cut(s)	130, 319
Bst4CI	ACNGT	1 cut(s)	118
BstDSI	CCRYGG	1 cut(s)	15
BstF5I	GGATG	3 cut(s)	32, 211, 232
BstKTI	GATC	2 cut(s)	133, 322
BstMBI	GATC	2 cut(s)	130, 319
BstNSI	RCATGY	2 cut(s)	252, 303
BstPAI	GACNNNNGTC	1 cut(s)	9
BstSCI	CCNGG	1 cut(s)	201
BstSFI	CTRYAG	2 cut(s)	168, 268
BstSLI	GKGCMC	1 cut(s)	203
BstV1I	GCAGC	2 cut(s)	86, 128
BsuI	GTATCC	1 cut(s)	33
BsuRI	GGCC	2 cut(s)	165, 338
BtgI	CCRYGG	1 cut(s)	15
BtsCI	GGATG	3 cut(s)	32, 211, 232
BtsI	GCAGTG	1 cut(s)	74
BtsIMutI	CAGTG	2 cut(s)	74, 114
Cfr13I	GGNCC	1 cut(s)	164
CviAII	CATG	3 cut(s)	249, 300, 332
CviJI	RGCY	6 cut(s)	53, 89, 99, 159, 165, 338
CviKI_1	RGCY	6 cut(s)	53, 89, 99, 159, 165, 338
DpnI	GATC	2 cut(s)	132, 321
DpnII	GATC	2 cut(s)	130, 319
DraI	TTTAAA	1 cut(s)	124
Eco88I	CYCGRG	1 cut(s)	221
FaeI	CATG	3 cut(s)	252, 303, 335
FaiI	YATR	6 cut(s)	213, 250, 270, 301, 314, 333
FaqI	GGGAC	1 cut(s)	274
FatI	CATG	3 cut(s)	248, 299, 331
FbaI	TGATCA	1 cut(s)	130
Fnu4HI	GCNGC	2 cut(s)	100, 142
FokI	GGATG	3 cut(s)	39, 218, 239
Fsp4HI	GCNGC	2 cut(s)	100, 142
FspBI	CTAG	3 cut(s)	33, 180, 305
GluI	GCNGC	2 cut(s)	100, 142
HaeIII	GGCC	2 cut(s)	165, 338
HapII	CCGG	1 cut(s)	203
Hin1II	CATG	3 cut(s)	252, 303, 335
HpaII	CCGG	1 cut(s)	203
Hpy188III	TCNNGA	1 cut(s)	180
HpyAV	CCTTC	1 cut(s)	79
HpyCH4III	ACNGT	1 cut(s)	118
HpyCH4V	TGCA	5 cut(s)	30, 48, 102, 114, 144
Hsp92II	CATG	3 cut(s)	252, 303, 335
Ksp22I	TGATCA	1 cut(s)	130
Kzo9I	GATC	2 cut(s)	130, 319
LmnI	GCTCC	1 cut(s)	156
LpnPI	CCDG	4 cut(s)	138, 216, 243, 250
Lsp1109I	GCAGC	2 cut(s)	86, 128
LweI	GCATC	2 cut(s)	17, 196
MaeI	CTAG	3 cut(s)	33, 180, 305
MaeIII	GTNAC	1 cut(s)	215
MalI	GATC	2 cut(s)	132, 321
MboI	GATC	2 cut(s)	130, 319
MhlI	GDGCHC	1 cut(s)	203
MluCI	AATT	2 cut(s)	80, 148
MnlI	CCTC	3 cut(s)	29, 89, 217
MseI	TTAA	2 cut(s)	60, 123
MslI	CAYNNNNRTG	1 cut(s)	247
MspI	CCGG	1 cut(s)	203
MspR9I	CCNGG	1 cut(s)	203
NciI	CCSGG	1 cut(s)	203
NdeII	GATC	2 cut(s)	130, 319
NlaIII	CATG	3 cut(s)	252, 303, 335
NlaIV	GGNNCC	1 cut(s)	200
NspI	RCATGY	2 cut(s)	252, 303
PciI	ACATGT	1 cut(s)	299
PkrI	GCNGC	2 cut(s)	101, 143
PscI	ACATGT	1 cut(s)	299
PshAI	GACNNNNGTC	1 cut(s)	9
PshBI	ATTAAT	1 cut(s)	60
PspN4I	GGNNCC	1 cut(s)	200
PspPI	GGNCC	1 cut(s)	164
RseI	CAYNNNNRTG	1 cut(s)	247
SaqAI	TTAA	2 cut(s)	60, 123
SatI	GCNGC	2 cut(s)	100, 142
Sau3AI	GATC	2 cut(s)	130, 319
Sau96I	GGNCC	1 cut(s)	164
ScrFI	CCNGG	1 cut(s)	203
SduI	GDGCHC	1 cut(s)	203
SetI	ASST	2 cut(s)	161, 195
SfaNI	GCATC	2 cut(s)	17, 196
SfcI	CTRYAG	2 cut(s)	168, 268
SmiMI	CAYNNNNRTG	1 cut(s)	247
SmlI	CTYRAG	1 cut(s)	90
SmoI	CTYRAG	1 cut(s)	90
Sse9I	AATT	2 cut(s)	80, 148
SspI	AATATT	1 cut(s)	137
SspMI	CTAG	3 cut(s)	33, 180, 305
StyD4I	CCNGG	1 cut(s)	201
TaaI	ACNGT	1 cut(s)	118
TasI	AATT	2 cut(s)	80, 148
Tru1I	TTAA	2 cut(s)	60, 123
Tru9I	TTAA	2 cut(s)	60, 123
TscAI	CASTG	2 cut(s)	74, 121
TseI	GCWGC	2 cut(s)	99, 141
TspGWI	ACGGA	1 cut(s)	32
TspRI	CASTG	2 cut(s)	74, 121
VspI	ATTAAT	1 cut(s)	60
XbaI	TCTAGA	1 cut(s)	179
XceI	RCATGY	2 cut(s)	252, 303
XspI	CTAG	3 cut(s)	33, 180, 305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.