Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001461

Physical Location & Seq

Genomic Coordinates Reverse (-)

16236885 .. 16240145

Gene Structure 3261 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G151400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 936 bp

ATGGAGACAATTTATTGTCCAGTCACCCAAGTGATAATTCAAGATCCAAAGCTTTTTCAGAACAAGCAGTCTAGATTGCTCACAGACTATGATGAGATTAAAGCCCTTGGTAGTGGAGCCTTTGGCGTTGTTGTCTCTTGCAAGAGTAAGATAGATGAGACATCTTATGCTGTGAAGAAAATTGCAATTGGCGACGAAGAGGAATTCAAGTTTGATCGGGTTAGAAGGGAGGTGCTGATCATGTCTCAGTTGCAGCATCCATATATCGTACGGTACCATACGGTATGGCTTGAGCCATTTTTGGCTGGTCTAAACAATATTGCTGATGATGATGATGAAGGGAATTCATCGGTTAGCAATATTAATCTCCCTCATCTATACATTCAAATGGAGTTGTGCGACAGCACTTTAAAGGATATATTTGAGAGTGACAAGATTATGACAGAGCCTTTATGTTGGAGAATTTTTGGAGACGTTATGAATGGTCTTACATATATGCATGCCCAAGGAATTATGCATGGAGATCTCTCTCCTGCTAATATTTTTAGGTGTGGTGATGTGTGGAAGATAGGGGACTTCGGACTAGTTTTTATTTTCTTCTTTGCAGCCCGAAATGTGAATGATGAAAATGATGATAAAGTGATTAAAAGCCTAAACATGAAGGGAACATATAAAGCACCAGATGAAAATGTGGATTGTGCTGTAGATATCTATAGTGCAGGTATTTTGCTATTTGTGATGATATTGAAAATGAAACTCATCACCGACATGGAAATGGTAGTAGCAATTGCAGATTTGAAGAATCGTGGGGAGCTGCCGGAGGAGTGGAATAATTATCCACGGTGGCAGTTAGTGCTGAAGCTCGTGCAGAGGAGACCGGACTTGAGGCCTAGTGCTAGGGATCTTTCAACGATTGTCATTGCTTACTCACAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

312

Amino Acids

35.57

Weight (kDa)

4.95

Isoelectric Point (pI)

44.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001461)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g14230 FvH4_1g14282
prunus_persica	Prupe.7G151400_v2.0.a1 Prupe.7G151400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0102471 RchiOBHm_Chr2g0102541 RchiOBHm_Chr2g0102571 RchiOBHm_Chr2g0102911
rosa_laevigata	RLG00000017150 RLG00000017151 RLG00000017153 RLG00000017166 RLG00000017169 RLG00000017171
rosa_multiflora	Rmu_co8249631.1_g000001 Rmu_sc0006537.1_g000001 Rmu_sc0008034.1_g000008 Rmu_sc0033667.1_g000001
rosa_roxburghii	Rroxscaffold_2G00140380 Rroxscaffold_2G00140480 Rroxscaffold_2G00140490 Rroxscaffold_4G00310880 Rroxscaffold_4G00310920
rosa_rugosa	Rorug02G0107800 Rorug02G0107800 Rorug02G0108700 Rorug02G0109200
rosa_samantha	Rh1AG182000 Rh1CG168800 Rh2AG155700 Rh2AG156200 Rh2AG156600 Rh2AG156800 Rh2BG162000 Rh2BG162500 Rh2BG162600 Rh2BG162800 Rh2BG163000 Rh2BG163100 Rh2CG161200 Rh2CG161500 Rh2CG161600 Rh2CG161900 Rh2CG163100 Rh2CG163400 Rh2CG165200 Rh2DG161200 Rh2DG161700 Rh2DG161900
rosa_wichuraiana	Rw2G012140 Rw2G012150 Rw2G012360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	710
Acc65I	GGTACC	1 cut(s)	273
AccB1I	GGYRCC	1 cut(s)	273
AclWI	GGATC	2 cut(s)	38, 909
AcsI	RAATTY	3 cut(s)	203, 343, 462
AcuI	CTGAAG	1 cut(s)	878
AfaI	GTAC	2 cut(s)	270, 275
AgsI	TTSAA	6 cut(s)	41, 208, 386, 748, 799, 909
AhlI	ACTAGT	1 cut(s)	583
AjuI	GAANNNNNNNTTGG	2 cut(s)	21, 53
AleI	CACNNNNGTG	1 cut(s)	29
AluBI	AGCT	3 cut(s)	52, 814, 862
AluI	AGCT	3 cut(s)	52, 814, 862
Alw26I	GTCTC	5 cut(s)	139, 152, 249, 465, 868
AlwI	GGATC	2 cut(s)	38, 909
AoxI	GGCC	1 cut(s)	887
ApeKI	GCWGC	3 cut(s)	253, 605, 814
ApoI	RAATTY	3 cut(s)	203, 343, 462
AseI	ATTAAT	1 cut(s)	363
Asp718I	GGTACC	1 cut(s)	273
AsuHPI	GGTGA	3 cut(s)	16, 566, 754
BanI	GGYRCC	1 cut(s)	273
BauI	CACGAG	1 cut(s)	863
BbvI	GCAGC	3 cut(s)	265, 617, 801
BclI	TGATCA	1 cut(s)	237
BcoDI	GTCTC	5 cut(s)	139, 152, 249, 465, 868
BcuI	ACTAGT	1 cut(s)	583
BfaI	CTAG	4 cut(s)	72, 584, 891, 897
BfmI	CTRYAG	2 cut(s)	702, 712
BfuAI	ACCTGC	1 cut(s)	710
BglII	AGATCT	1 cut(s)	523
BisI	GCNGC	3 cut(s)	254, 606, 815
BlsI	GCNGC	3 cut(s)	255, 607, 816
BmiI	GGNNCC	2 cut(s)	118, 275
BmsI	GCATC	1 cut(s)	265
BpuEI	CTTGAG	2 cut(s)	311, 904
BsaI	GGTCTC	1 cut(s)	868
BsaJI	CCNNGG	3 cut(s)	106, 505, 839
BsaWI	WCCGGW	1 cut(s)	877
Bse1I	ACTGG	1 cut(s)	20
Bse3DI	GCAATG	1 cut(s)	918
BseDI	CCNNGG	3 cut(s)	106, 505, 839
BseGI	GGATG	1 cut(s)	256
BseMI	GCAATG	1 cut(s)	918
BseMII	CTCAG	1 cut(s)	260
BseNI	ACTGG	1 cut(s)	20
BseRI	GAGGAG	2 cut(s)	836, 886
BseXI	GCAGC	3 cut(s)	265, 617, 801
BsgI	GTGCAG	2 cut(s)	738, 887
BshFI	GGCC	1 cut(s)	889
BshNI	GGYRCC	1 cut(s)	273
BsiSI	CCGG	2 cut(s)	818, 878
BsiWI	CGTACG	1 cut(s)	268
BslFI	GGGAC	1 cut(s)	587
BsmAI	GTCTC	5 cut(s)	139, 152, 249, 465, 868
BsmBI	CGTCTC	1 cut(s)	465
BsmFI	GGGAC	1 cut(s)	587
BsnI	GGCC	1 cut(s)	889
Bso31I	GGTCTC	1 cut(s)	868
Bsp143I	GATC	5 cut(s)	43, 214, 237, 523, 901
BspANI	GGCC	1 cut(s)	889
BspCNI	CTCAG	1 cut(s)	259
BspLI	GGNNCC	2 cut(s)	118, 275
BspMI	ACCTGC	1 cut(s)	710
BspPI	GGATC	2 cut(s)	38, 909
BspT107I	GGYRCC	1 cut(s)	273
BspTNI	GGTCTC	1 cut(s)	868
BsrDI	GCAATG	1 cut(s)	918
BsrI	ACTGG	1 cut(s)	20
BssECI	CCNNGG	3 cut(s)	106, 505, 839
BssMI	GATC	5 cut(s)	43, 214, 237, 523, 901
BssSI	CACGAG	1 cut(s)	863
BssT1I	CCWWGG	2 cut(s)	106, 505
Bst2BI	CACGAG	1 cut(s)	863
Bst4CI	ACNGT	4 cut(s)	273, 283, 843, 933
Bst6I	CTCTTC	1 cut(s)	192
BstAPI	GCANNNNNTGC	1 cut(s)	853
BstC8I	GCNNGC	1 cut(s)	501
BstDEI	CTNAG	1 cut(s)	246
BstDSI	CCRYGG	1 cut(s)	839
BstF5I	GGATG	1 cut(s)	256
BstKTI	GATC	5 cut(s)	46, 217, 240, 526, 904
BstMAI	GTCTC	5 cut(s)	139, 152, 249, 465, 868
BstMBI	GATC	5 cut(s)	43, 214, 237, 523, 901
BstMWI	GCNNNNNNNGC	1 cut(s)	853
BstNSI	RCATGY	1 cut(s)	503
BstSFI	CTRYAG	2 cut(s)	702, 712
BstV1I	GCAGC	3 cut(s)	265, 617, 801
BstX2I	RGATCY	3 cut(s)	43, 523, 901
BstYI	RGATCY	3 cut(s)	43, 523, 901
BsuRI	GGCC	1 cut(s)	889
BtgI	CCRYGG	1 cut(s)	839
BtsCI	GGATG	1 cut(s)	256
BveI	ACCTGC	1 cut(s)	710
Cac8I	GCNNGC	1 cut(s)	501
Csp6I	GTAC	2 cut(s)	269, 274
CviAII	CATG	5 cut(s)	241, 500, 518, 658, 769
CviQI	GTAC	2 cut(s)	269, 274
DdeI	CTNAG	1 cut(s)	246
DpnI	GATC	5 cut(s)	45, 216, 239, 525, 903
DpnII	GATC	5 cut(s)	43, 214, 237, 523, 901
DraI	TTTAAA	1 cut(s)	411
Eam1104I	CTCTTC	1 cut(s)	192
EarI	CTCTTC	1 cut(s)	192
Eco130I	CCWWGG	2 cut(s)	106, 505
Eco147I	AGGCCT	1 cut(s)	889
Eco31I	GGTCTC	1 cut(s)	868
Eco32I	GATATC	1 cut(s)	709
Eco57I	CTGAAG	1 cut(s)	878
EcoRI	GAATTC	2 cut(s)	203, 343
EcoRV	GATATC	1 cut(s)	709
EcoT14I	CCWWGG	2 cut(s)	106, 505
EcoT22I	ATGCAT	2 cut(s)	501, 519
ErhI	CCWWGG	2 cut(s)	106, 505
Esp3I	CGTCTC	1 cut(s)	465
FaeI	CATG	5 cut(s)	244, 503, 521, 661, 772
FaqI	GGGAC	1 cut(s)	587
FatI	CATG	5 cut(s)	240, 499, 517, 657, 768
FbaI	TGATCA	1 cut(s)	237
Fnu4HI	GCNGC	3 cut(s)	254, 606, 815
FokI	GGATG	1 cut(s)	243
Fsp4HI	GCNGC	3 cut(s)	254, 606, 815
FspBI	CTAG	4 cut(s)	72, 584, 891, 897
GluI	GCNGC	3 cut(s)	254, 606, 815
HaeIII	GGCC	1 cut(s)	889
HapII	CCGG	2 cut(s)	818, 878
Hin1II	CATG	5 cut(s)	244, 503, 521, 661, 772
HindIII	AAGCTT	1 cut(s)	50
HinfI	GANTC	1 cut(s)	802
HpaII	CCGG	2 cut(s)	818, 878
HphI	GGTGA	3 cut(s)	16, 566, 754
Hpy188I	TCNGA	2 cut(s)	60, 581
Hpy188III	TCNNGA	2 cut(s)	41, 72
Hpy99I	CGWCG	1 cut(s)	197
HpyAV	CCTTC	3 cut(s)	219, 332, 655
HpyCH4III	ACNGT	4 cut(s)	273, 283, 843, 933
HpyCH4IV	ACGT	1 cut(s)	474
HpyCH4V	TGCA	9 cut(s)	141, 185, 253, 499, 517, 605, 719, 791, 868
HpyF10VI	GCNNNNNNNGC	1 cut(s)	853
HpyF3I	CTNAG	1 cut(s)	246
HpySE526I	ACGT	1 cut(s)	474
Hsp92II	CATG	5 cut(s)	244, 503, 521, 661, 772
KpnI	GGTACC	1 cut(s)	277
Ksp22I	TGATCA	1 cut(s)	237
Kzo9I	GATC	5 cut(s)	43, 214, 237, 523, 901
LmnI	GCTCC	2 cut(s)	116, 811
LpnPI	CCDG	7 cut(s)	33, 291, 546, 693, 705, 831, 891
Lsp1109I	GCAGC	3 cut(s)	265, 617, 801
LweI	GCATC	1 cut(s)	265
MaeI	CTAG	4 cut(s)	72, 584, 891, 897
MaeII	ACGT	1 cut(s)	474
MaeIII	GTNAC	2 cut(s)	22, 428
MalI	GATC	5 cut(s)	45, 216, 239, 525, 903
MboI	GATC	5 cut(s)	43, 214, 237, 523, 901
MboII	GAAGA	5 cut(s)	187, 209, 577, 589, 811
MfeI	CAATTG	2 cut(s)	186, 786
MflI	RGATCY	3 cut(s)	43, 523, 901
MmeI	TCCRAC	1 cut(s)	437
MnlI	CCTC	6 cut(s)	193, 223, 381, 814, 864, 879
Mph1103I	ATGCAT	2 cut(s)	501, 519
MseI	TTAA	4 cut(s)	99, 363, 410, 645
MslI	CAYNNNNRTG	4 cut(s)	29, 386, 767, 773
MspI	CCGG	2 cut(s)	818, 878
MunI	CAATTG	2 cut(s)	186, 786
MwoI	GCNNNNNNNGC	1 cut(s)	853
NdeII	GATC	5 cut(s)	43, 214, 237, 523, 901
NlaIII	CATG	5 cut(s)	244, 503, 521, 661, 772
NlaIV	GGNNCC	2 cut(s)	118, 275
NmuCI	GTSAC	2 cut(s)	22, 428
NsiI	ATGCAT	2 cut(s)	501, 519
NspI	RCATGY	1 cut(s)	503
OliI	CACNNNNGTG	1 cut(s)	29
PaeI	GCATGC	1 cut(s)	503
PceI	AGGCCT	1 cut(s)	889
PfeI	GAWTC	1 cut(s)	802
Pfl23II	CGTACG	1 cut(s)	268
PkrI	GCNGC	3 cut(s)	255, 607, 816
PshBI	ATTAAT	1 cut(s)	363
PspLI	CGTACG	1 cut(s)	268
PspN4I	GGNNCC	2 cut(s)	118, 275
PsuI	RGATCY	3 cut(s)	43, 523, 901
RsaI	GTAC	2 cut(s)	270, 275
RsaNI	GTAC	2 cut(s)	269, 274
RseI	CAYNNNNRTG	4 cut(s)	29, 386, 767, 773
SaqAI	TTAA	4 cut(s)	99, 363, 410, 645
SatI	GCNGC	3 cut(s)	254, 606, 815
Sau3AI	GATC	5 cut(s)	43, 214, 237, 523, 901
SetI	ASST	7 cut(s)	54, 234, 477, 551, 724, 816, 864
SfaNI	GCATC	1 cut(s)	265
SfcI	CTRYAG	2 cut(s)	702, 712
SmiMI	CAYNNNNRTG	4 cut(s)	29, 386, 767, 773
SmlI	CTYRAG	2 cut(s)	290, 883
SmoI	CTYRAG	2 cut(s)	290, 883
SpeI	ACTAGT	1 cut(s)	583
SphI	GCATGC	1 cut(s)	503
SseBI	AGGCCT	1 cut(s)	889
SspI	AATATT	3 cut(s)	319, 361, 541
SspMI	CTAG	4 cut(s)	72, 584, 891, 897
StuI	AGGCCT	1 cut(s)	889
StyI	CCWWGG	2 cut(s)	106, 505
TaaI	ACNGT	4 cut(s)	273, 283, 843, 933
TaiI	ACGT	1 cut(s)	477
TfiI	GAWTC	1 cut(s)	802
Tru1I	TTAA	4 cut(s)	99, 363, 410, 645
Tru9I	TTAA	4 cut(s)	99, 363, 410, 645
TseFI	GTSAC	2 cut(s)	22, 428
TseI	GCWGC	3 cut(s)	253, 605, 814
Tsp45I	GTSAC	2 cut(s)	22, 428
TspDTI	ATGAA	7 cut(s)	336, 351, 494, 639, 674, 699, 767
VspI	ATTAAT	1 cut(s)	363
XapI	RAATTY	3 cut(s)	203, 343, 462
XbaI	TCTAGA	1 cut(s)	71
XceI	RCATGY	1 cut(s)	503
XspI	CTAG	4 cut(s)	72, 584, 891, 897
Zsp2I	ATGCAT	2 cut(s)	501, 519

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.