Rh2BG163100

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0001461
Physical Location & Seq
Reverse (-)
14270779 .. 14274814
4036 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG163100.1

Sequence Viewer

Length: 1095 bp
ATGAAGGCTGGAGCACTTACGCTGGAAGAATGTGCACACATTTTCTTGGAAACCGCAAAAGGCCTAAAACACATTCATGGTCACAATATCATGCATGGAGACATTAAGAAGGCAAACATATTCTTCAGCAATGGCCTGCTGAAAATTGGAGATTTTGGCCTCGATGTGCCGCCGGGAATTATATGTCCTGACACTGGAGTCACTATCCAGACCTACCAGGTGTCTAATGTTGATGACAGAACCTACTCCAAGTTTAGCTCTGAGTATGATGTGGCAGCAGAAGAGTTTATTGGGGCTGGCGCATTCGGCGTTGTCGTTCGATGCAAGAACCTGATAGACAACCAAACTTATGCCATAAAGAAAATATCAATTGGTAACAGGGACAATACTGATGGATATGGCAACTATAGAGACCTATTAAGGGAGTCTATCATTTTAGCCACATTTGATGACCCTGCTGTTGTTCGGTATCACTCGACCTGGATGGAGTGCACTTTTGTTGGCACTACTGGAGGTGAACCTGATATTGTGGAAACCAATCCATGTCTTTACATACAACAGCAACTATGTGAGAGCACGTTGGAGCAAAAGATGAGGAGTACCGAACTTTCAAAGGAAGAATGTGCAGTCATTTTCTCACAGGTGGCACGCGGCCTAGCACACATCCACAGTCACAACATAATGCATGGTGATCTTGGCAGAGGAAATATATTCTTGAACAAGAACCAAGCAAAAATTGGAGACTTTGGACTTTCCCGGATCATCAGTGAAGGTGATGCTGTAATTCATTTAGGAGATCCCCCACCTCCATACGCCGCAGCTGATAAATGTGTCAATGCAAAAGCGGATGTCTACAGTCTGGGGATTCTGCTGGTGCAGATGCTTCTCAACATCAGAACAGATTCAGAAGCATCAAAGGTGTTTCCTGACCTGAAAAAAGAAGAACCAGTGTTTCCTGCCTACTGGCCTAACGGTGTGCTGAAGACTTGGGTGACAAACATGCTGAAAAAAAATCCATCAGAAAGACCATCATCATCAGATATCGTGGAGAACCTACGCAAGATAGAGGATGCTATTCTGGAGTTTGATTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

364

Amino Acids

40.25

Weight (kDa)

5.41

Isoelectric Point (pI)

45.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 4 - 54 3.4e-12 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 5 - 54 1.2e-06 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 93 - 352 9.9e-22 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 94 - 350 4.2e-34 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 197
AccI GTMKAC 1 cut(s) 852
AccII CGCG 1 cut(s) 651
AciI CCGC 5 cut(s) 54, 170, 651, 816, 845
AclWI GGATC 2 cut(s) 767, 791
AcuI CTGAAG 2 cut(s) 109, 1001
AfaI GTAC 1 cut(s) 601
AfiI CCNNNNNNNGG 2 cut(s) 194, 421
AgsI TTSAA 2 cut(s) 612, 718
AjnI CCWGG 2 cut(s) 216, 479
AjuI GAANNNNNNNTTGG 2 cut(s) 273, 305
AluBI AGCT 2 cut(s) 258, 821
AluI AGCT 2 cut(s) 258, 821
Alw21I GWGCWC 4 cut(s) 16, 37, 494, 578
Alw26I GTCTC 3 cut(s) 93, 405, 735
Alw44I GTGCAC 2 cut(s) 33, 490
AlwI GGATC 2 cut(s) 767, 791
AoxI GGCC 5 cut(s) 61, 133, 157, 652, 965
ApaLI GTGCAC 2 cut(s) 33, 490
ApeKI GCWGC 2 cut(s) 275, 818
Asp700I GAANNNNTTC 1 cut(s) 901
AspLEI GCGC 1 cut(s) 302
AsuC2I CCSGG 2 cut(s) 174, 757
AsuHPI GGTGA 4 cut(s) 527, 701, 785, 1003
BaeGI GKGCMC 2 cut(s) 37, 494
BbsI GAAGAC 1 cut(s) 989
Bbv12I GWGCWC 4 cut(s) 16, 37, 494, 578
BbvI GCAGC 2 cut(s) 287, 830
BccI CCATC 4 cut(s) 386, 478, 1024, 1036
BciT130I CCWGG 2 cut(s) 218, 481
BcnI CCSGG 2 cut(s) 174, 757
BcoDI GTCTC 3 cut(s) 93, 405, 735
BfaI CTAG 1 cut(s) 656
BfmI CTRYAG 2 cut(s) 406, 853
BisI GCNGC 5 cut(s) 170, 276, 652, 816, 819
BlsI GCNGC 5 cut(s) 171, 277, 653, 817, 820
Bme1390I CCNGG 4 cut(s) 174, 218, 481, 757
BmrFI CCNGG 4 cut(s) 174, 218, 481, 757
BmsI GCATC 5 cut(s) 311, 766, 870, 920, 1060
BpiI GAAGAC 1 cut(s) 989
BpmI CTGGAG 3 cut(s) 30, 216, 531
BpuMI CCSGG 2 cut(s) 174, 757
BsaI GGTCTC 1 cut(s) 405
Bsc4I CCNNNNNNNGG 2 cut(s) 194, 421
Bse1I ACTGG 4 cut(s) 199, 514, 947, 968
Bse3DI GCAATG 1 cut(s) 136
BseBI CCWGG 2 cut(s) 218, 481
BseGI GGATG 4 cut(s) 489, 663, 853, 1075
BseLI CCNNNNNNNGG 2 cut(s) 194, 421
BseMI GCAATG 1 cut(s) 136
BseMII CTCAG 1 cut(s) 252
BseNI ACTGG 4 cut(s) 199, 514, 947, 968
BseRI GAGGAG 1 cut(s) 610
BseSI GKGCMC 2 cut(s) 37, 494
BseXI GCAGC 2 cut(s) 287, 830
BsgI GTGCAG 2 cut(s) 645, 896
Bsh1236I CGCG 1 cut(s) 651
BshFI GGCC 5 cut(s) 63, 135, 159, 654, 967
BsiHKAI GWGCWC 4 cut(s) 16, 37, 494, 578
BsiSI CCGG 2 cut(s) 173, 757
BslFI GGGAC 1 cut(s) 395
BslI CCNNNNNNNGG 2 cut(s) 194, 421
BsmAI GTCTC 3 cut(s) 93, 405, 735
BsmFI GGGAC 1 cut(s) 395
BsmI GAATGC 1 cut(s) 302
BsnI GGCC 5 cut(s) 63, 135, 159, 654, 967
Bso31I GGTCTC 1 cut(s) 405
Bsp1286I GDGCHC 4 cut(s) 16, 37, 494, 578
Bsp143I GATC 3 cut(s) 691, 759, 796
BspACI CCGC 5 cut(s) 54, 170, 651, 816, 845
BspANI GGCC 5 cut(s) 63, 135, 159, 654, 967
BspCNI CTCAG 1 cut(s) 253
BspFNI CGCG 1 cut(s) 651
BspPI GGATC 2 cut(s) 767, 791
BspTNI GGTCTC 1 cut(s) 405
BsrDI GCAATG 1 cut(s) 136
BsrI ACTGG 4 cut(s) 199, 514, 947, 968
BssMI GATC 3 cut(s) 691, 759, 796
Bst2UI CCWGG 2 cut(s) 218, 481
Bst4CI ACNGT 3 cut(s) 671, 857, 974
Bst6I CTCTTC 1 cut(s) 276
BstC8I GCNNGC 3 cut(s) 137, 298, 649
BstDEI CTNAG 1 cut(s) 261
BstF5I GGATG 4 cut(s) 489, 663, 853, 1075
BstFNI CGCG 1 cut(s) 651
BstHHI GCGC 1 cut(s) 302
BstKTI GATC 3 cut(s) 694, 762, 799
BstMAI GTCTC 3 cut(s) 93, 405, 735
BstMBI GATC 3 cut(s) 691, 759, 796
BstMWI GCNNNNNNNGC 1 cut(s) 306
BstNI CCWGG 2 cut(s) 218, 481
BstNSI RCATGY 1 cut(s) 1003
BstSCI CCNGG 4 cut(s) 172, 216, 479, 755
BstSFI CTRYAG 2 cut(s) 406, 853
BstSLI GKGCMC 2 cut(s) 37, 494
BstUI CGCG 1 cut(s) 651
BstV1I GCAGC 2 cut(s) 287, 830
BstV2I GAAGAC 1 cut(s) 989
BstX2I RGATCY 1 cut(s) 796
BstYI RGATCY 1 cut(s) 796
BsuRI GGCC 5 cut(s) 63, 135, 159, 654, 967
BtsCI GGATG 4 cut(s) 489, 663, 853, 1075
BtsIMutI CAGTG 3 cut(s) 192, 772, 954
Cac8I GCNNGC 3 cut(s) 137, 298, 649
CfoI GCGC 1 cut(s) 302
CsiI ACCWGGT 1 cut(s) 216
Csp6I GTAC 1 cut(s) 600
CviAII CATG 6 cut(s) 77, 91, 95, 543, 686, 1000
CviQI GTAC 1 cut(s) 600
DdeI CTNAG 1 cut(s) 261
DpnI GATC 3 cut(s) 693, 761, 798
DpnII GATC 3 cut(s) 691, 759, 796
DrdI GACNNNNNNGTC 1 cut(s) 197
DseDI GACNNNNNNGTC 1 cut(s) 197
Eam1104I CTCTTC 1 cut(s) 276
EarI CTCTTC 1 cut(s) 276
Eco147I AGGCCT 1 cut(s) 63
Eco31I GGTCTC 1 cut(s) 405
Eco32I GATATC 1 cut(s) 1042
Eco57I CTGAAG 2 cut(s) 109, 1001
EcoRII CCWGG 2 cut(s) 216, 479
EcoRV GATATC 1 cut(s) 1042
EcoT22I ATGCAT 2 cut(s) 96, 687
FaeI CATG 6 cut(s) 80, 94, 98, 546, 689, 1003
FaqI GGGAC 1 cut(s) 395
FatI CATG 6 cut(s) 76, 90, 94, 542, 685, 999
FblI GTMKAC 1 cut(s) 852
Fnu4HI GCNGC 5 cut(s) 170, 276, 652, 816, 819
FokI GGATG 4 cut(s) 496, 650, 860, 1082
Fsp4HI GCNGC 5 cut(s) 170, 276, 652, 816, 819
FspBI CTAG 1 cut(s) 656
GlaI GCGC 1 cut(s) 301
GluI GCNGC 5 cut(s) 170, 276, 652, 816, 819
GsuI CTGGAG 3 cut(s) 30, 216, 531
HaeIII GGCC 5 cut(s) 63, 135, 159, 654, 967
HapII CCGG 2 cut(s) 173, 757
HhaI GCGC 1 cut(s) 302
Hin1II CATG 6 cut(s) 80, 94, 98, 546, 689, 1003
Hin6I GCGC 1 cut(s) 300
HinP1I GCGC 1 cut(s) 300
HinfI GANTC 5 cut(s) 198, 425, 865, 902, 1088
HpaII CCGG 2 cut(s) 173, 757
HphI GGTGA 4 cut(s) 527, 701, 785, 1003
Hpy166II GTNNAC 4 cut(s) 35, 492, 518, 853
Hpy188I TCNGA 5 cut(s) 262, 896, 907, 1021, 1039
Hpy188III TCNNGA 5 cut(s) 188, 208, 715, 926, 1079
Hpy8I GTNNAC 4 cut(s) 35, 492, 518, 853
HpyAV CCTTC 2 cut(s) 103, 764
HpyCH4III ACNGT 3 cut(s) 671, 857, 974
HpyCH4IV ACGT 1 cut(s) 578
HpyCH4V TGCA 8 cut(s) 35, 94, 324, 492, 626, 685, 839, 877
HpyF10VI GCNNNNNNNGC 1 cut(s) 306
HpyF3I CTNAG 1 cut(s) 261
HpySE526I ACGT 1 cut(s) 578
Hsp92II CATG 6 cut(s) 80, 94, 98, 546, 689, 1003
HspAI GCGC 1 cut(s) 300
Kzo9I GATC 3 cut(s) 691, 759, 796
LmnI GCTCC 2 cut(s) 11, 583
Lsp1109I GCAGC 2 cut(s) 287, 830
LweI GCATC 5 cut(s) 311, 766, 870, 920, 1060
MabI ACCWGGT 1 cut(s) 216
MaeI CTAG 1 cut(s) 656
MaeII ACGT 1 cut(s) 578
MaeIII GTNAC 5 cut(s) 80, 199, 374, 671, 991
MalI GATC 3 cut(s) 693, 761, 798
MboI GATC 3 cut(s) 691, 759, 796
MboII GAAGA 6 cut(s) 38, 115, 293, 629, 953, 994
MfeI CAATTG 1 cut(s) 369
MflI RGATCY 1 cut(s) 796
MhlI GDGCHC 4 cut(s) 16, 37, 494, 578
MluCI AATT 5 cut(s) 144, 177, 369, 735, 783
MlyI GAGTC 2 cut(s) 207, 434
MmeI TCCRAC 1 cut(s) 561
MnlI CCTC 6 cut(s) 170, 506, 588, 695, 816, 1060
Mph1103I ATGCAT 2 cut(s) 96, 687
MroXI GAANNNNTTC 1 cut(s) 901
MseI TTAA 3 cut(s) 105, 419, 1093
MslI CAYNNNNRTG 1 cut(s) 75
MspA1I CMGCKG 1 cut(s) 821
MspI CCGG 2 cut(s) 173, 757
MspR9I CCNGG 4 cut(s) 174, 218, 481, 757
MunI CAATTG 1 cut(s) 369
Mva1269I GAATGC 1 cut(s) 302
MvaI CCWGG 2 cut(s) 218, 481
MvnI CGCG 1 cut(s) 651
MwoI GCNNNNNNNGC 1 cut(s) 306
NciI CCSGG 2 cut(s) 174, 757
NdeII GATC 3 cut(s) 691, 759, 796
NlaIII CATG 6 cut(s) 80, 94, 98, 546, 689, 1003
NmuCI GTSAC 4 cut(s) 80, 199, 671, 991
NsiI ATGCAT 2 cut(s) 96, 687
NspI RCATGY 1 cut(s) 1003
PceI AGGCCT 1 cut(s) 63
PcsI WCGNNNNNNNCGW 1 cut(s) 312
PctI GAATGC 1 cut(s) 302
PdmI GAANNNNTTC 1 cut(s) 901
PfeI GAWTC 3 cut(s) 865, 902, 1088
PfoI TCCNGGA 1 cut(s) 755
PkrI GCNGC 5 cut(s) 171, 277, 653, 817, 820
PleI GAGTC 2 cut(s) 206, 433
PpsI GAGTC 2 cut(s) 206, 433
Psp6I CCWGG 2 cut(s) 216, 479
PspGI CCWGG 2 cut(s) 216, 479
PsuI RGATCY 1 cut(s) 796
PvuII CAGCTG 1 cut(s) 821
RsaI GTAC 1 cut(s) 601
RsaNI GTAC 1 cut(s) 600
RseI CAYNNNNRTG 1 cut(s) 75
SaqAI TTAA 3 cut(s) 105, 419, 1093
SatI GCNGC 5 cut(s) 170, 276, 652, 816, 819
Sau3AI GATC 3 cut(s) 691, 759, 796
SchI GAGTC 2 cut(s) 207, 434
ScrFI CCNGG 4 cut(s) 174, 218, 481, 757
SduI GDGCHC 4 cut(s) 16, 37, 494, 578
SexAI ACCWGGT 1 cut(s) 216
SfaNI GCATC 5 cut(s) 311, 766, 870, 920, 1060
SfcI CTRYAG 2 cut(s) 406, 853
SmiMI CAYNNNNRTG 1 cut(s) 75
Sse9I AATT 5 cut(s) 144, 177, 369, 735, 783
SseBI AGGCCT 1 cut(s) 63
SsiI CCGC 5 cut(s) 54, 170, 651, 816, 845
SspMI CTAG 1 cut(s) 656
StuI AGGCCT 1 cut(s) 63
StyD4I CCNGG 4 cut(s) 172, 216, 479, 755
TaaI ACNGT 3 cut(s) 671, 857, 974
TaiI ACGT 1 cut(s) 581
TaqI TCGA 3 cut(s) 162, 319, 476
TasI AATT 5 cut(s) 144, 177, 369, 735, 783
TauI GCSGC 3 cut(s) 172, 654, 818
TfiI GAWTC 3 cut(s) 865, 902, 1088
Tru1I TTAA 3 cut(s) 105, 419, 1093
Tru9I TTAA 3 cut(s) 105, 419, 1093
TscAI CASTG 3 cut(s) 199, 772, 954
TseFI GTSAC 4 cut(s) 80, 199, 671, 991
TseI GCWGC 2 cut(s) 275, 818
Tsp45I GTSAC 4 cut(s) 80, 199, 671, 991
TspDTI ATGAA 3 cut(s) 17, 65, 776
TspRI CASTG 3 cut(s) 199, 772, 954
VneI GTGCAC 2 cut(s) 33, 490
XceI RCATGY 1 cut(s) 1003
XcmI CCANNNNNNNNNTGG 1 cut(s) 734
XmiI GTMKAC 1 cut(s) 852
XmnI GAANNNNTTC 1 cut(s) 901
XspI CTAG 1 cut(s) 656
Zsp2I ATGCAT 2 cut(s) 96, 687
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.