Zinc finger protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 405 |
| Acc36I | ACCTGC | 4 cut(s) | 225, 385, 405, 824 |
| AccB1I | GGYRCC | 1 cut(s) | 359 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1133 |
| AciI | CCGC | 4 cut(s) | 205, 363, 481, 685 |
| AcsI | RAATTY | 3 cut(s) | 75, 334, 542 |
| AcuI | CTGAAG | 2 cut(s) | 476, 588 |
| AfaI | GTAC | 2 cut(s) | 814, 975 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 283, 417, 1133 |
| AflII | CTTAAG | 1 cut(s) | 779 |
| AflIII | ACRYGT | 1 cut(s) | 961 |
| AgsI | TTSAA | 5 cut(s) | 370, 678, 740, 891, 1097 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1068 |
| AjnI | CCWGG | 4 cut(s) | 639, 742, 1206, 1226 |
| AluBI | AGCT | 5 cut(s) | 456, 608, 712, 841, 971 |
| AluI | AGCT | 5 cut(s) | 456, 608, 712, 841, 971 |
| Alw26I | GTCTC | 2 cut(s) | 252, 1138 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 397 |
| Ama87I | CYCGRG | 1 cut(s) | 1009 |
| AoxI | GGCC | 5 cut(s) | 4, 182, 419, 831, 1124 |
| ApeKI | GCWGC | 4 cut(s) | 391, 628, 682, 838 |
| ApoI | RAATTY | 3 cut(s) | 75, 334, 542 |
| AspLEI | GCGC | 1 cut(s) | 622 |
| AspS9I | GGNCC | 7 cut(s) | 4, 27, 94, 182, 237, 469, 831 |
| AsuHPI | GGTGA | 2 cut(s) | 157, 317 |
| AvaI | CYCGRG | 1 cut(s) | 1009 |
| AvaII | GGWCC | 4 cut(s) | 27, 94, 237, 469 |
| BaeGI | GKGCMC | 1 cut(s) | 1154 |
| BanI | GGYRCC | 1 cut(s) | 359 |
| BbsI | GAAGAC | 2 cut(s) | 917, 1067 |
| BbvI | GCAGC | 4 cut(s) | 403, 640, 669, 850 |
| BccI | CCATC | 4 cut(s) | 145, 283, 302, 492 |
| BceAI | ACGGC | 1 cut(s) | 125 |
| BciT130I | CCWGG | 4 cut(s) | 641, 744, 1208, 1228 |
| BcoDI | GTCTC | 2 cut(s) | 252, 1138 |
| BfaI | CTAG | 2 cut(s) | 713, 1255 |
| BfmI | CTRYAG | 2 cut(s) | 232, 457 |
| BfrI | CTTAAG | 1 cut(s) | 779 |
| BfuAI | ACCTGC | 4 cut(s) | 225, 385, 405, 824 |
| BisI | GCNGC | 5 cut(s) | 363, 392, 629, 683, 839 |
| BlsI | GCNGC | 5 cut(s) | 364, 393, 630, 684, 840 |
| Bme1390I | CCNGG | 4 cut(s) | 641, 744, 1208, 1228 |
| Bme18I | GGWCC | 4 cut(s) | 27, 94, 237, 469 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1068 |
| BmeT110I | CYCGRG | 1 cut(s) | 1009 |
| BmgT120I | GGNCC | 7 cut(s) | 4, 27, 94, 182, 237, 469, 831 |
| BmiI | GGNNCC | 4 cut(s) | 96, 183, 361, 832 |
| BmrFI | CCNGG | 4 cut(s) | 641, 744, 1208, 1228 |
| BmsI | GCATC | 2 cut(s) | 237, 871 |
| BpiI | GAAGAC | 2 cut(s) | 917, 1067 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1208, 1240 |
| BpuEI | CTTGAG | 3 cut(s) | 371, 434, 1001 |
| BsaJI | CCNNGG | 6 cut(s) | 141, 499, 553, 1084, 1127, 1206 |
| BsaWI | WCCGGW | 1 cut(s) | 1116 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1202, 1232 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 283, 417, 1133 |
| Bse1I | ACTGG | 5 cut(s) | 24, 29, 521, 793, 1069 |
| Bse3DI | GCAATG | 2 cut(s) | 252, 779 |
| BseBI | CCWGG | 4 cut(s) | 641, 744, 1208, 1228 |
| BseDI | CCNNGG | 6 cut(s) | 141, 499, 553, 1084, 1127, 1206 |
| BseGI | GGATG | 2 cut(s) | 445, 1073 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 283, 417, 1133 |
| BseMI | GCAATG | 2 cut(s) | 252, 779 |
| BseMII | CTCAG | 2 cut(s) | 582, 833 |
| BseNI | ACTGG | 5 cut(s) | 24, 29, 521, 793, 1069 |
| BseSI | GKGCMC | 1 cut(s) | 1154 |
| BseXI | GCAGC | 4 cut(s) | 403, 640, 669, 850 |
| BsgI | GTGCAG | 1 cut(s) | 363 |
| BshFI | GGCC | 5 cut(s) | 6, 184, 421, 833, 1126 |
| BshNI | GGYRCC | 1 cut(s) | 359 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1009 |
| BsiSI | CCGG | 1 cut(s) | 1117 |
| BslFI | GGGAC | 1 cut(s) | 80 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 283, 417, 1133 |
| BsmAI | GTCTC | 2 cut(s) | 252, 1138 |
| BsmFI | GGGAC | 1 cut(s) | 80 |
| BsmI | GAATGC | 1 cut(s) | 728 |
| BsnI | GGCC | 5 cut(s) | 6, 184, 421, 833, 1126 |
| BsoBI | CYCGRG | 1 cut(s) | 1009 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1154 |
| Bsp1407I | TGTACA | 1 cut(s) | 973 |
| Bsp143I | GATC | 1 cut(s) | 1235 |
| Bsp19I | CCATGG | 1 cut(s) | 1084 |
| BspACI | CCGC | 4 cut(s) | 205, 363, 481, 685 |
| BspANI | GGCC | 5 cut(s) | 6, 184, 421, 833, 1126 |
| BspCNI | CTCAG | 2 cut(s) | 583, 834 |
| BspLI | GGNNCC | 4 cut(s) | 96, 183, 361, 832 |
| BspMAI | CTGCAG | 1 cut(s) | 236 |
| BspMI | ACCTGC | 4 cut(s) | 225, 385, 405, 824 |
| BspT107I | GGYRCC | 1 cut(s) | 359 |
| BspTI | CTTAAG | 1 cut(s) | 779 |
| BsrDI | GCAATG | 2 cut(s) | 252, 779 |
| BsrGI | TGTACA | 1 cut(s) | 973 |
| BsrI | ACTGG | 5 cut(s) | 24, 29, 521, 793, 1069 |
| BssECI | CCNNGG | 6 cut(s) | 141, 499, 553, 1084, 1127, 1206 |
| BssMI | GATC | 1 cut(s) | 1235 |
| BssT1I | CCWWGG | 4 cut(s) | 499, 553, 1084, 1127 |
| Bst2UI | CCWGG | 4 cut(s) | 641, 744, 1208, 1228 |
| Bst4CI | ACNGT | 5 cut(s) | 224, 305, 721, 1149, 1250 |
| Bst6I | CTCTTC | 1 cut(s) | 1092 |
| BstAFI | CTTAAG | 1 cut(s) | 779 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 397 |
| BstAUI | TGTACA | 1 cut(s) | 973 |
| BstDEI | CTNAG | 2 cut(s) | 591, 842 |
| BstDSI | CCRYGG | 2 cut(s) | 141, 1084 |
| BstF5I | GGATG | 2 cut(s) | 445, 1073 |
| BstHHI | GCGC | 1 cut(s) | 622 |
| BstKTI | GATC | 1 cut(s) | 1238 |
| BstMAI | GTCTC | 2 cut(s) | 252, 1138 |
| BstMBI | GATC | 1 cut(s) | 1235 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 39, 397, 453, 628, 688 |
| BstNI | CCWGG | 4 cut(s) | 641, 744, 1208, 1228 |
| BstNSI | RCATGY | 4 cut(s) | 575, 635, 965, 1043 |
| BstSCI | CCNGG | 4 cut(s) | 639, 742, 1206, 1226 |
| BstSFI | CTRYAG | 2 cut(s) | 232, 457 |
| BstSLI | GKGCMC | 1 cut(s) | 1154 |
| BstV1I | GCAGC | 4 cut(s) | 403, 640, 669, 850 |
| BstV2I | GAAGAC | 2 cut(s) | 917, 1067 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 647 |
| BsuRI | GGCC | 5 cut(s) | 6, 184, 421, 833, 1126 |
| BtgI | CCRYGG | 2 cut(s) | 141, 1084 |
| BtsCI | GGATG | 2 cut(s) | 445, 1073 |
| BtsIMutI | CAGTG | 6 cut(s) | 80, 441, 588, 726, 1154, 1255 |
| BveI | ACCTGC | 4 cut(s) | 225, 385, 405, 824 |
| CaiI | CAGNNNCTG | 1 cut(s) | 397 |
| CfoI | GCGC | 1 cut(s) | 622 |
| Cfr13I | GGNCC | 7 cut(s) | 4, 27, 94, 182, 237, 469, 831 |
| Csp6I | GTAC | 2 cut(s) | 813, 974 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 123, 158, 808, 843 |
| CviQI | GTAC | 2 cut(s) | 813, 974 |
| DdeI | CTNAG | 2 cut(s) | 591, 842 |
| DpnI | GATC | 1 cut(s) | 1237 |
| DpnII | GATC | 1 cut(s) | 1235 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1068 |
| Eam1104I | CTCTTC | 1 cut(s) | 1092 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1068 |
| EarI | CTCTTC | 1 cut(s) | 1092 |
| Eco130I | CCWWGG | 4 cut(s) | 499, 553, 1084, 1127 |
| Eco47I | GGWCC | 4 cut(s) | 27, 94, 237, 469 |
| Eco57I | CTGAAG | 2 cut(s) | 476, 588 |
| Eco88I | CYCGRG | 1 cut(s) | 1009 |
| EcoO109I | RGGNCCY | 1 cut(s) | 182 |
| EcoRII | CCWGG | 4 cut(s) | 639, 742, 1206, 1226 |
| EcoT14I | CCWWGG | 4 cut(s) | 499, 553, 1084, 1127 |
| ErhI | CCWWGG | 4 cut(s) | 499, 553, 1084, 1127 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 458, 490, 492, 524 |
| FaqI | GGGAC | 1 cut(s) | 80 |
| FauI | CCCGC | 1 cut(s) | 488 |
| Fnu4HI | GCNGC | 5 cut(s) | 363, 392, 629, 683, 839 |
| FokI | GGATG | 2 cut(s) | 452, 1080 |
| Fsp4HI | GCNGC | 5 cut(s) | 363, 392, 629, 683, 839 |
| FspBI | CTAG | 2 cut(s) | 713, 1255 |
| GlaI | GCGC | 1 cut(s) | 621 |
| GluI | GCNGC | 5 cut(s) | 363, 392, 629, 683, 839 |
| HaeIII | GGCC | 5 cut(s) | 6, 184, 421, 833, 1126 |
| HapII | CCGG | 1 cut(s) | 1117 |
| HhaI | GCGC | 1 cut(s) | 622 |
| Hin6I | GCGC | 1 cut(s) | 620 |
| HinP1I | GCGC | 1 cut(s) | 620 |
| HinfI | GANTC | 3 cut(s) | 698, 949, 1211 |
| HpaII | CCGG | 1 cut(s) | 1117 |
| HphI | GGTGA | 2 cut(s) | 157, 317 |
| Hpy166II | GTNNAC | 2 cut(s) | 936, 976 |
| Hpy188I | TCNGA | 2 cut(s) | 1176, 1216 |
| Hpy188III | TCNNGA | 1 cut(s) | 370 |
| Hpy8I | GTNNAC | 2 cut(s) | 936, 976 |
| HpyAV | CCTTC | 5 cut(s) | 169, 500, 612, 852, 872 |
| HpyCH4III | ACNGT | 5 cut(s) | 224, 305, 721, 1149, 1250 |
| HpyCH4IV | ACGT | 2 cut(s) | 583, 932 |
| HpyCH4V | TGCA | 6 cut(s) | 234, 380, 400, 534, 819, 1031 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 39, 397, 453, 628, 688 |
| HpyF3I | CTNAG | 2 cut(s) | 591, 842 |
| HpySE526I | ACGT | 2 cut(s) | 583, 932 |
| HspAI | GCGC | 1 cut(s) | 620 |
| Kzo9I | GATC | 1 cut(s) | 1235 |
| LmnI | GCTCC | 1 cut(s) | 617 |
| Lsp1109I | GCAGC | 4 cut(s) | 403, 640, 669, 850 |
| LweI | GCATC | 2 cut(s) | 237, 871 |
| MaeI | CTAG | 2 cut(s) | 713, 1255 |
| MaeII | ACGT | 2 cut(s) | 583, 932 |
| MaeIII | GTNAC | 4 cut(s) | 557, 584, 1183, 1250 |
| MalI | GATC | 1 cut(s) | 1237 |
| MboI | GATC | 1 cut(s) | 1235 |
| MboII | GAAGA | 8 cut(s) | 160, 184, 341, 362, 857, 917, 1072, 1109 |
| MhlI | GDGCHC | 1 cut(s) | 1154 |
| MluCI | AATT | 7 cut(s) | 61, 75, 334, 542, 645, 900, 1112 |
| MlyI | GAGTC | 1 cut(s) | 1220 |
| MseI | TTAA | 6 cut(s) | 47, 540, 564, 708, 780, 903 |
| MslI | CAYNNNNRTG | 2 cut(s) | 576, 1163 |
| MspA1I | CMGCKG | 2 cut(s) | 608, 841 |
| MspCI | CTTAAG | 1 cut(s) | 779 |
| MspI | CCGG | 1 cut(s) | 1117 |
| MspR9I | CCNGG | 4 cut(s) | 641, 744, 1208, 1228 |
| Mva1269I | GAATGC | 1 cut(s) | 728 |
| MvaI | CCWGG | 4 cut(s) | 641, 744, 1208, 1228 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 39, 397, 453, 628, 688 |
| NcoI | CCATGG | 1 cut(s) | 1084 |
| NdeII | GATC | 1 cut(s) | 1235 |
| NlaIV | GGNNCC | 4 cut(s) | 96, 183, 361, 832 |
| NmuCI | GTSAC | 2 cut(s) | 584, 1250 |
| NspI | RCATGY | 4 cut(s) | 575, 635, 965, 1043 |
| PaqCI | CACCTGC | 1 cut(s) | 405 |
| PciI | ACATGT | 1 cut(s) | 961 |
| PctI | GAATGC | 1 cut(s) | 728 |
| PfeI | GAWTC | 2 cut(s) | 698, 949 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1133 |
| PkrI | GCNGC | 5 cut(s) | 364, 393, 630, 684, 840 |
| PleI | GAGTC | 1 cut(s) | 1219 |
| PpsI | GAGTC | 1 cut(s) | 1219 |
| PscI | ACATGT | 1 cut(s) | 961 |
| Psp6I | CCWGG | 4 cut(s) | 639, 742, 1206, 1226 |
| PspGI | CCWGG | 4 cut(s) | 639, 742, 1206, 1226 |
| PspN4I | GGNNCC | 4 cut(s) | 96, 183, 361, 832 |
| PspPI | GGNCC | 7 cut(s) | 4, 27, 94, 182, 237, 469, 831 |
| PstI | CTGCAG | 1 cut(s) | 236 |
| PstNI | CAGNNNCTG | 1 cut(s) | 397 |
| PvuII | CAGCTG | 2 cut(s) | 608, 841 |
| RsaI | GTAC | 2 cut(s) | 814, 975 |
| RsaNI | GTAC | 2 cut(s) | 813, 974 |
| RseI | CAYNNNNRTG | 2 cut(s) | 576, 1163 |
| SaqAI | TTAA | 6 cut(s) | 47, 540, 564, 708, 780, 903 |
| SatI | GCNGC | 5 cut(s) | 363, 392, 629, 683, 839 |
| Sau3AI | GATC | 1 cut(s) | 1235 |
| Sau96I | GGNCC | 7 cut(s) | 4, 27, 94, 182, 237, 469, 831 |
| SchI | GAGTC | 1 cut(s) | 1220 |
| ScrFI | CCNGG | 4 cut(s) | 641, 744, 1208, 1228 |
| SduI | GDGCHC | 1 cut(s) | 1154 |
| SfaNI | GCATC | 2 cut(s) | 237, 871 |
| SfcI | CTRYAG | 2 cut(s) | 232, 457 |
| SinI | GGWCC | 4 cut(s) | 27, 94, 237, 469 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 576, 1163 |
| SmlI | CTYRAG | 4 cut(s) | 386, 413, 779, 980 |
| SmoI | CTYRAG | 4 cut(s) | 386, 413, 779, 980 |
| Sse9I | AATT | 7 cut(s) | 61, 75, 334, 542, 645, 900, 1112 |
| SsiI | CCGC | 4 cut(s) | 205, 363, 481, 685 |
| SspI | AATATT | 1 cut(s) | 538 |
| SspMI | CTAG | 2 cut(s) | 713, 1255 |
| StyD4I | CCNGG | 4 cut(s) | 639, 742, 1206, 1226 |
| StyI | CCWWGG | 4 cut(s) | 499, 553, 1084, 1127 |
| TaaI | ACNGT | 5 cut(s) | 224, 305, 721, 1149, 1250 |
| TaiI | ACGT | 2 cut(s) | 586, 935 |
| TaqI | TCGA | 1 cut(s) | 947 |
| TaqII | GACCGA | 2 cut(s) | 82, 1188 |
| TasI | AATT | 7 cut(s) | 61, 75, 334, 542, 645, 900, 1112 |
| TatI | WGTACW | 1 cut(s) | 973 |
| TauI | GCSGC | 1 cut(s) | 365 |
| TfiI | GAWTC | 2 cut(s) | 698, 949 |
| Tru1I | TTAA | 6 cut(s) | 47, 540, 564, 708, 780, 903 |
| Tru9I | TTAA | 6 cut(s) | 47, 540, 564, 708, 780, 903 |
| TscAI | CASTG | 6 cut(s) | 87, 441, 595, 726, 1154, 1255 |
| TseFI | GTSAC | 2 cut(s) | 584, 1250 |
| TseI | GCWGC | 4 cut(s) | 391, 628, 682, 838 |
| Tsp45I | GTSAC | 2 cut(s) | 584, 1250 |
| TspDTI | ATGAA | 4 cut(s) | 594, 767, 776, 891 |
| TspRI | CASTG | 6 cut(s) | 87, 441, 595, 726, 1154, 1255 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1133 |
| Vha464I | CTTAAG | 1 cut(s) | 779 |
| VpaK11BI | GGWCC | 4 cut(s) | 27, 94, 237, 469 |
| XapI | RAATTY | 3 cut(s) | 75, 334, 542 |
| XceI | RCATGY | 4 cut(s) | 575, 635, 965, 1043 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1061 |
| XspI | CTAG | 2 cut(s) | 713, 1255 |