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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g03501 FvH4_4g03502 |
| prunus_persica | Prupe.1G038100_v2.0.a1 |
| pyrus_communis | pycom15g37330 |
| rosa_chinensis | RchiOBHm_Chr4g0392661 |
| rosa_laevigata | RLG00000009688 RLG00000009761 RLG00000009792 RLG00000009794 RLG00000009795 RLG00000009796 RLG00000021222 |
| rosa_multiflora | Rmu_co8319103.1_g000001 Rmu_sc0000498.1_g000035 Rmu_sc0000498.1_g000037 Rmu_sc0000498.1_g000038 Rmu_sc0000498.1_g000041 Rmu_sc0005424.1_g000017 |
| rosa_roxburghii | Rroxscaffold_171G00441360 Rroxscaffold_5G00337840 Rroxscaffold_5G00337850 |
| rosa_rugosa | Rorug03G0339700 Rorug03G0339900 Rorug03G0340000 |
| rosa_samantha | Rh4AG044000 Rh4AG044100 Rh4BG005900 Rh4BG039200 Rh4BG039300 Rh4BG039500 Rh4BG039600 Rh4BG051000 Rh4CG046800 Rh4CG046900 Rh4CG047000 Rh4CG047100 Rh4CG057900 Rh4DG041200 Rh4DG041300 Rh4DG041400 Rh4DG041500 Rh4DG044500 |
| rosa_wichuraiana | Rw0G012120 Rw0G012130 Rw0G012140 Rw0G012150 Rw4G004280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 9 cut(s) | 670, 796, 922, 1048, 1150, 1276, 1402, 1504, 1630 |
| AciI | CCGC | 9 cut(s) | 509, 641, 767, 893, 1019, 1121, 1247, 1373, 1475 |
| AclWI | GGATC | 2 cut(s) | 422, 435 |
| AcsI | RAATTY | 1 cut(s) | 348 |
| AcyI | GRCGYC | 9 cut(s) | 667, 793, 919, 1045, 1147, 1273, 1399, 1501, 1627 |
| AfaI | GTAC | 2 cut(s) | 12, 1936 |
| AgsI | TTSAA | 3 cut(s) | 123, 1724, 1865 |
| AjnI | CCWGG | 5 cut(s) | 463, 472, 523, 532, 589 |
| AleI | CACNNNNGTG | 1 cut(s) | 534 |
| Alw26I | GTCTC | 2 cut(s) | 75, 1884 |
| AlwI | GGATC | 2 cut(s) | 422, 435 |
| Ama87I | CYCGRG | 2 cut(s) | 353, 512 |
| ApeKI | GCWGC | 1 cut(s) | 1789 |
| ApoI | RAATTY | 1 cut(s) | 348 |
| AsuHPI | GGTGA | 3 cut(s) | 106, 488, 548 |
| AsuII | TTCGAA | 1 cut(s) | 37 |
| AvaI | CYCGRG | 2 cut(s) | 353, 512 |
| BamHI | GGATCC | 1 cut(s) | 427 |
| BanII | GRGCYC | 1 cut(s) | 267 |
| BbvI | GCAGC | 1 cut(s) | 1801 |
| BccI | CCATC | 8 cut(s) | 50, 457, 689, 1067, 1169, 1295, 1421, 1649 |
| BciT130I | CCWGG | 5 cut(s) | 465, 474, 525, 534, 591 |
| BclI | TGATCA | 1 cut(s) | 538 |
| BcoDI | GTCTC | 2 cut(s) | 75, 1884 |
| BfaI | CTAG | 2 cut(s) | 86, 332 |
| BisI | GCNGC | 9 cut(s) | 641, 767, 893, 1019, 1121, 1247, 1373, 1475, 1790 |
| BlsI | GCNGC | 9 cut(s) | 642, 768, 894, 1020, 1122, 1248, 1374, 1476, 1791 |
| Bme1390I | CCNGG | 5 cut(s) | 465, 474, 525, 534, 591 |
| BmeT110I | CYCGRG | 2 cut(s) | 353, 512 |
| BmiI | GGNNCC | 1 cut(s) | 429 |
| BmrFI | CCNGG | 5 cut(s) | 465, 474, 525, 534, 591 |
| BmrI | ACTGGG | 1 cut(s) | 1947 |
| BmsI | GCATC | 1 cut(s) | 16 |
| BmuI | ACTGGG | 1 cut(s) | 1947 |
| Bpu14I | TTCGAA | 1 cut(s) | 37 |
| BpuEI | CTTGAG | 2 cut(s) | 254, 357 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1857 |
| BsaHI | GRCGYC | 9 cut(s) | 667, 793, 919, 1045, 1147, 1273, 1399, 1501, 1627 |
| BsaJI | CCNNGG | 5 cut(s) | 354, 532, 589, 609, 1910 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 93, 109, 123, 139 |
| Bse1I | ACTGG | 3 cut(s) | 1781, 1936, 1942 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1857 |
| BseBI | CCWGG | 5 cut(s) | 465, 474, 525, 534, 591 |
| BseDI | CCNNGG | 5 cut(s) | 354, 532, 589, 609, 1910 |
| BseJI | GATNNNNATC | 1 cut(s) | 1857 |
| BseMII | CTCAG | 2 cut(s) | 414, 1908 |
| BseNI | ACTGG | 3 cut(s) | 1781, 1936, 1942 |
| BseRI | GAGGAG | 2 cut(s) | 153, 1895 |
| BseXI | GCAGC | 1 cut(s) | 1801 |
| BsiHKCI | CYCGRG | 2 cut(s) | 353, 512 |
| BslFI | GGGAC | 2 cut(s) | 372, 411 |
| BsmAI | GTCTC | 2 cut(s) | 75, 1884 |
| BsmFI | GGGAC | 2 cut(s) | 372, 411 |
| BsoBI | CYCGRG | 2 cut(s) | 353, 512 |
| Bsp119I | TTCGAA | 1 cut(s) | 37 |
| Bsp143I | GATC | 5 cut(s) | 427, 538, 1741, 1852, 1897 |
| BspACI | CCGC | 9 cut(s) | 509, 641, 767, 893, 1019, 1121, 1247, 1373, 1475 |
| BspCNI | CTCAG | 2 cut(s) | 415, 1907 |
| BspHI | TCATGA | 2 cut(s) | 595, 1849 |
| BspLI | GGNNCC | 1 cut(s) | 429 |
| BspPI | GGATC | 2 cut(s) | 422, 435 |
| BspQI | GCTCTTC | 1 cut(s) | 210 |
| BspT104I | TTCGAA | 1 cut(s) | 37 |
| BsrI | ACTGG | 3 cut(s) | 1781, 1936, 1942 |
| BssECI | CCNNGG | 5 cut(s) | 354, 532, 589, 609, 1910 |
| BssMI | GATC | 5 cut(s) | 427, 538, 1741, 1852, 1897 |
| BssNI | GRCGYC | 9 cut(s) | 667, 793, 919, 1045, 1147, 1273, 1399, 1501, 1627 |
| BssT1I | CCWWGG | 1 cut(s) | 609 |
| Bst2UI | CCWGG | 5 cut(s) | 465, 474, 525, 534, 591 |
| Bst6I | CTCTTC | 3 cut(s) | 210, 1860, 1882 |
| BstACI | GRCGYC | 9 cut(s) | 667, 793, 919, 1045, 1147, 1273, 1399, 1501, 1627 |
| BstBI | TTCGAA | 1 cut(s) | 37 |
| BstC8I | GCNNGC | 1 cut(s) | 1706 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1698 |
| BstKTI | GATC | 5 cut(s) | 430, 541, 1744, 1855, 1900 |
| BstMAI | GTCTC | 2 cut(s) | 75, 1884 |
| BstMBI | GATC | 5 cut(s) | 427, 538, 1741, 1852, 1897 |
| BstNI | CCWGG | 5 cut(s) | 465, 474, 525, 534, 591 |
| BstSCI | CCNGG | 5 cut(s) | 463, 472, 523, 532, 589 |
| BstV1I | GCAGC | 1 cut(s) | 1801 |
| BstX2I | RGATCY | 1 cut(s) | 427 |
| BstYI | RGATCY | 1 cut(s) | 427 |
| BtsIMutI | CAGTG | 1 cut(s) | 420 |
| Cac8I | GCNNGC | 1 cut(s) | 1706 |
| CciI | TCATGA | 2 cut(s) | 595, 1849 |
| CsiI | ACCWGGT | 1 cut(s) | 472 |
| Csp6I | GTAC | 2 cut(s) | 11, 1935 |
| CviAII | CATG | 2 cut(s) | 596, 1850 |
| CviQI | GTAC | 2 cut(s) | 11, 1935 |
| DpnI | GATC | 5 cut(s) | 429, 540, 1743, 1854, 1899 |
| DpnII | GATC | 5 cut(s) | 427, 538, 1741, 1852, 1897 |
| Eam1104I | CTCTTC | 3 cut(s) | 210, 1860, 1882 |
| EarI | CTCTTC | 3 cut(s) | 210, 1860, 1882 |
| Eco130I | CCWWGG | 1 cut(s) | 609 |
| Eco24I | GRGCYC | 1 cut(s) | 267 |
| Eco88I | CYCGRG | 2 cut(s) | 353, 512 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1698 |
| EcoRII | CCWGG | 5 cut(s) | 463, 472, 523, 532, 589 |
| EcoT14I | CCWWGG | 1 cut(s) | 609 |
| EcoT38I | GRGCYC | 1 cut(s) | 267 |
| ErhI | CCWWGG | 1 cut(s) | 609 |
| FaeI | CATG | 2 cut(s) | 599, 1853 |
| FaiI | YATR | 6 cut(s) | 16, 54, 258, 597, 1728, 1851 |
| FaqI | GGGAC | 2 cut(s) | 372, 411 |
| FatI | CATG | 2 cut(s) | 595, 1849 |
| FbaI | TGATCA | 1 cut(s) | 538 |
| Fnu4HI | GCNGC | 9 cut(s) | 641, 767, 893, 1019, 1121, 1247, 1373, 1475, 1790 |
| FriOI | GRGCYC | 1 cut(s) | 267 |
| Fsp4HI | GCNGC | 9 cut(s) | 641, 767, 893, 1019, 1121, 1247, 1373, 1475, 1790 |
| FspBI | CTAG | 2 cut(s) | 86, 332 |
| GluI | GCNGC | 9 cut(s) | 641, 767, 893, 1019, 1121, 1247, 1373, 1475, 1790 |
| Hin1I | GRCGYC | 9 cut(s) | 667, 793, 919, 1045, 1147, 1273, 1399, 1501, 1627 |
| Hin1II | CATG | 2 cut(s) | 599, 1853 |
| HphI | GGTGA | 3 cut(s) | 106, 488, 548 |
| Hpy166II | GTNNAC | 1 cut(s) | 11 |
| Hpy188I | TCNGA | 4 cut(s) | 101, 454, 1897, 1914 |
| Hpy188III | TCNNGA | 7 cut(s) | 353, 374, 431, 542, 596, 1850, 1862 |
| Hpy8I | GTNNAC | 1 cut(s) | 11 |
| Hpy99I | CGWCG | 9 cut(s) | 672, 798, 924, 1050, 1152, 1278, 1404, 1506, 1739 |
| HpyAV | CCTTC | 3 cut(s) | 138, 177, 1816 |
| HpyCH4IV | ACGT | 9 cut(s) | 667, 793, 919, 1045, 1147, 1273, 1399, 1501, 1627 |
| HpyCH4V | TGCA | 1 cut(s) | 29 |
| HpySE526I | ACGT | 9 cut(s) | 667, 793, 919, 1045, 1147, 1273, 1399, 1501, 1627 |
| Hsp92I | GRCGYC | 9 cut(s) | 667, 793, 919, 1045, 1147, 1273, 1399, 1501, 1627 |
| Hsp92II | CATG | 2 cut(s) | 599, 1853 |
| Ksp22I | TGATCA | 1 cut(s) | 538 |
| Kzo9I | GATC | 5 cut(s) | 427, 538, 1741, 1852, 1897 |
| LguI | GCTCTTC | 1 cut(s) | 210 |
| LmnI | GCTCC | 8 cut(s) | 631, 757, 883, 1009, 1237, 1363, 1465, 1591 |
| Lsp1109I | GCAGC | 1 cut(s) | 1801 |
| LweI | GCATC | 1 cut(s) | 16 |
| MabI | ACCWGGT | 1 cut(s) | 472 |
| MaeI | CTAG | 2 cut(s) | 86, 332 |
| MaeII | ACGT | 9 cut(s) | 667, 793, 919, 1045, 1147, 1273, 1399, 1501, 1627 |
| MalI | GATC | 5 cut(s) | 429, 540, 1743, 1854, 1899 |
| MboI | GATC | 5 cut(s) | 427, 538, 1741, 1852, 1897 |
| MboII | GAAGA | 7 cut(s) | 227, 250, 502, 586, 1877, 1899, 1954 |
| MflI | RGATCY | 1 cut(s) | 427 |
| MmeI | TCCRAC | 2 cut(s) | 79, 221 |
| MseI | TTAA | 1 cut(s) | 207 |
| MslI | CAYNNNNRTG | 1 cut(s) | 534 |
| MspR9I | CCNGG | 5 cut(s) | 465, 474, 525, 534, 591 |
| MvaI | CCWGG | 5 cut(s) | 465, 474, 525, 534, 591 |
| NdeII | GATC | 5 cut(s) | 427, 538, 1741, 1852, 1897 |
| NlaIII | CATG | 2 cut(s) | 599, 1853 |
| NlaIV | GGNNCC | 1 cut(s) | 429 |
| NspV | TTCGAA | 1 cut(s) | 37 |
| OliI | CACNNNNGTG | 1 cut(s) | 534 |
| PagI | TCATGA | 2 cut(s) | 595, 1849 |
| PciSI | GCTCTTC | 1 cut(s) | 210 |
| PfeI | GAWTC | 1 cut(s) | 545 |
| PkrI | GCNGC | 9 cut(s) | 642, 768, 894, 1020, 1122, 1248, 1374, 1476, 1791 |
| Psp6I | CCWGG | 5 cut(s) | 463, 472, 523, 532, 589 |
| PspGI | CCWGG | 5 cut(s) | 463, 472, 523, 532, 589 |
| PspN4I | GGNNCC | 1 cut(s) | 429 |
| PsuI | RGATCY | 1 cut(s) | 427 |
| RsaI | GTAC | 2 cut(s) | 12, 1936 |
| RsaNI | GTAC | 2 cut(s) | 11, 1935 |
| RseI | CAYNNNNRTG | 1 cut(s) | 534 |
| SapI | GCTCTTC | 1 cut(s) | 210 |
| SaqAI | TTAA | 1 cut(s) | 207 |
| SatI | GCNGC | 9 cut(s) | 641, 767, 893, 1019, 1121, 1247, 1373, 1475, 1790 |
| Sau3AI | GATC | 5 cut(s) | 427, 538, 1741, 1852, 1897 |
| ScrFI | CCNGG | 5 cut(s) | 465, 474, 525, 534, 591 |
| SexAI | ACCWGGT | 1 cut(s) | 472 |
| SfaNI | GCATC | 1 cut(s) | 16 |
| SfuI | TTCGAA | 1 cut(s) | 37 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 534 |
| SmlI | CTYRAG | 2 cut(s) | 269, 372 |
| SmoI | CTYRAG | 2 cut(s) | 269, 372 |
| SsiI | CCGC | 9 cut(s) | 509, 641, 767, 893, 1019, 1121, 1247, 1373, 1475 |
| SspMI | CTAG | 2 cut(s) | 86, 332 |
| StyD4I | CCNGG | 5 cut(s) | 463, 472, 523, 532, 589 |
| StyI | CCWWGG | 1 cut(s) | 609 |
| TaiI | ACGT | 9 cut(s) | 670, 796, 922, 1048, 1150, 1276, 1402, 1504, 1630 |
| TaqI | TCGA | 1 cut(s) | 37 |
| TauI | GCSGC | 8 cut(s) | 643, 769, 895, 1021, 1123, 1249, 1375, 1477 |
| TfiI | GAWTC | 1 cut(s) | 545 |
| Tru1I | TTAA | 1 cut(s) | 207 |
| Tru9I | TTAA | 1 cut(s) | 207 |
| TscAI | CASTG | 1 cut(s) | 427 |
| TseI | GCWGC | 1 cut(s) | 1789 |
| TspGWI | ACGGA | 7 cut(s) | 804, 930, 1056, 1158, 1284, 1512, 1752 |
| TspRI | CASTG | 1 cut(s) | 427 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1698 |
| XapI | RAATTY | 1 cut(s) | 348 |
| XspI | CTAG | 2 cut(s) | 86, 332 |
| ZraI | GACGTC | 9 cut(s) | 668, 794, 920, 1046, 1148, 1274, 1400, 1502, 1628 |