Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001101

Physical Location & Seq

Genomic Coordinates Reverse (-)

56066015 .. 56068281

Gene Structure 2267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ20805

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGCATGGTCCACAAGGTACAGGAAAGACATCAGCCTCAAGAATTTTTGCTGCAGCTCTTAATTGTCTTTCACTGGAGGAGTACAGGCCGTGTGGTCTCTTCTGCGAGTGTAATGTGTACTTTTCTGGAAGCAGCAGAGATATCAAGGAAATAGATTCTGTGAGAATCAACCAGAGAGACCGGTTTAGGTGTCTTATTATGAATGCAGCTACACCTCCCGTATCTTCATGGTTTAAGGTTTTCGTCATTGATGAGTGCCACTTGATGCCTGCCGCGGATTCAATATCACGGTCCCAGAGATATCACTTCCCAAAGATTAAGGATGGTGATATTGCAAGCAAGTTGGGAAAAATTTGTGTTGAAGAGGGTCTTGAGTTTGATCAGGTTGCTTTAAACTTCATCGCTGCCAAATCAAATGGTTCACTTAGGGATGCAGAGATGACGCTTGATCAGCTAAGTTTGCTTGGTAAAAAAATCACAATGGGCTTGGCATACGAGCTTATTGGAGCTGTTTCTGATGATGAATTACTCGATTTGCTAGATCTGGCATTGTCATCTGACACTTCTAATACAGTTTTAAGGGCCTGGGAGTTGATGAGATCAAGGATTGATCCGATGCAACTTATATCGCAGTTGGCAAATCTTATTATGGACATCCTTGCTGGTGAGGAAGGTGGTTCTGAAGTCCAGAAACAGTTCTCTCGTAGGCATACCTCTGAAATGGACCTCCAGAAACTGAGTCATGCATTGAAAATATTCTCTGAAATTGAGAAGCAATTAAGGGTATCCAAGAATCAAACAACATGGCTTACTGCAGCTCTATTGCAGCTAAGCTCTGCGGAGTCCTCCTCCTCATTGGATGCTAGTGATACAAAGAGGCAGAGCTTCAAGATTCTTGACCCTACTTCATGCAATGTCAACACTTCAGACAAGTTGGGAATGCAAAAGGATATTGATGAACAGTTGGAATCCGTATGGAAGAGAGCTATAGATTTATGCCAATCCAAGTCATTCAAGAACTTTTTGAGGAAACAAGGAAGATTGTCGTCTCTATTTGTGAATCAAGGTCTCGCTATAGCTGAATTGGAATTCTGCCACCCTGATTATGTATCCAAGGCTGAGAAGTCATGGAAAATCATTGCAAGTGCACTCCAATCTCTATTCGGTTGTAATGTGGAGATCAGGATCAATCTTGTACGTGCTACCGAGTCAAAGTATGCAAACGTGAAGAAGCCATCTTTTAGGTTGTTCAGCTGTTCCCGCAGAATGCAACAAAAGTCACCATCTTTCTGTGAGCGCGGAAGTGGTTCAGACTACTCTTTAGTACACATCGGAAAAGCCTATATTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005663 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_pol3_delta2 DNA_pol3_gamma3

Protein Analysis

450

Amino Acids

50.34

Weight (kDa)

8.32

Isoelectric Point (pI)

44.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNAX_ATPase_lid	PF22608	111 - 151	5.1e-07	DNA polymerase III clamp loader subunit, ATPase lid domain
RCF1-5-like_lid	PF21960	114 - 149	8.4e-06	RCF1/5-like, AAA+ ATPase lid domain
DnaA_N-like_STI	PF23007	315 - 398	2.2e-31	STICHEL, DnaA_N-like alpha-beta domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001101)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24790 AT4G24790 AT4G24790 AT4G24790 AT4G24790
fragaria_vesca	FvH4_5g06841
malus_domestica	MD06G1160000.v1.1 MD14G1166000.v1.1
prunus_persica	Prupe.5G160500_v2.0.a1
pyrus_communis	pycom06g14310 pycom14g13860 pycom14g13870
rosa_chinensis	RchiOBHm_Chr7g0191751 RchiOBHm_Chr7g0232131
rosa_laevigata	RLG00000001389 RLG00000001431 RLG00000004429
rosa_multiflora	Rmu_co8050558.1_g000001 Rmu_co8237971.1_g000001 Rmu_co8286355.1_g000001 Rmu_co8458339.1_g000001 Rmu_sc0000616.1_g000013 Rmu_sc0003901.1_g000007 Rmu_sc0012403.1_g000007
rosa_roxburghii	Rroxscaffold_3G00228760 Rroxscaffold_3G00263560 Rroxscaffold_3G00263570 Rroxscaffold_3G00263580
rosa_rugosa	Rorug06G0511100 Rorug07G0265100 Rorug07G0265200 Rorug07G0269600
rosa_samantha	Rh7AG120700 Rh7AG417900 Rh7AG418000 Rh7AG418100 Rh7AG418200 Rh7AG424100 Rh7AG424200 Rh7BG122500 Rh7BG397900 Rh7BG398000 Rh7BG398100 Rh7CG125300 Rh7CG437800 Rh7CG437900 Rh7CG444400 Rh7CG444500 Rh7DG124000 Rh7DG411900 Rh7DG412000 Rh7DG412100 Rh7DG412200 Rh7DG416000 Rh7DG416100 Rh7DG416200
rosa_wichuraiana	Rw7G010290 Rw7G034600 Rw7G035070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	275, 1299
AciI	CCGC	5 cut(s)	273, 275, 839, 1261, 1299
AclWI	GGATC	2 cut(s)	605, 1193
AcsI	RAATTY	3 cut(s)	42, 351, 1088
AcuI	CTGAAG	2 cut(s)	702, 909
AfaI	GTAC	5 cut(s)	19, 83, 119, 1197, 1326
AgeI	ACCGGT	1 cut(s)	180
AgsI	TTSAA	5 cut(s)	282, 362, 751, 889, 1015
AjnI	CCWGG	1 cut(s)	584
Alw21I	GWGCWC	1 cut(s)	1150
Alw26I	GTCTC	4 cut(s)	101, 171, 1053, 1073
Alw44I	GTGCAC	1 cut(s)	1146
AlwI	GGATC	2 cut(s)	605, 1193
AlwNI	CAGNNNCTG	1 cut(s)	736
AoxI	GGCC	2 cut(s)	86, 582
ApaLI	GTGCAC	1 cut(s)	1146
ApeKI	GCWGC	7 cut(s)	50, 53, 132, 206, 404, 815, 826
ApoI	RAATTY	3 cut(s)	42, 351, 1088
AsiGI	ACCGGT	1 cut(s)	180
Asp700I	GAANNNNTTC	3 cut(s)	695, 755, 1306
AspLEI	GCGC	1 cut(s)	1299
AspS9I	GGNCC	4 cut(s)	8, 291, 582, 724
AsuHPI	GGTGA	3 cut(s)	338, 677, 1272
AvaII	GGWCC	3 cut(s)	8, 291, 724
BaeGI	GKGCMC	1 cut(s)	1150
Bbv12I	GWGCWC	1 cut(s)	1150
BbvI	GCAGC	7 cut(s)	37, 65, 144, 218, 391, 827, 838
BccI	CCATC	3 cut(s)	317, 1243, 1291
BceAI	ACGGC	1 cut(s)	73
BciT130I	CCWGG	1 cut(s)	586
BciVI	GTATCC	2 cut(s)	796, 1120
BclI	TGATCA	2 cut(s)	379, 448
BcoDI	GTCTC	4 cut(s)	101, 171, 1053, 1073
BfaI	CTAG	2 cut(s)	539, 864
BfmI	CTRYAG	4 cut(s)	51, 813, 987, 1074
BfuI	GTATCC	2 cut(s)	796, 1120
BglII	AGATCT	1 cut(s)	541
BisI	GCNGC	8 cut(s)	51, 54, 133, 207, 273, 405, 816, 827
BlpI	GCTNAGC	1 cut(s)	830
BlsI	GCNGC	8 cut(s)	52, 55, 134, 208, 274, 406, 817, 828
Bme1390I	CCNGG	1 cut(s)	586
Bme18I	GGWCC	3 cut(s)	8, 291, 724
BmgT120I	GGNCC	4 cut(s)	8, 291, 582, 724
BmiI	GGNNCC	1 cut(s)	293
BmrFI	CCNGG	1 cut(s)	586
BmsI	GCATC	4 cut(s)	255, 421, 606, 850
BplI	GAGNNNNNCTC	2 cut(s)	833, 865
BpmI	CTGGAG	2 cut(s)	95, 713
Bpu1102I	GCTNAGC	1 cut(s)	830
BpuEI	CTTGAG	2 cut(s)	22, 392
BsaAI	YACGTR	1 cut(s)	1199
BsaBI	GATNNNNATC	1 cut(s)	1184
BsaI	GGTCTC	3 cut(s)	101, 171, 1073
BsaJI	CCNNGG	3 cut(s)	273, 585, 1113
BsaWI	WCCGGW	1 cut(s)	180
Bse118I	RCCGGY	1 cut(s)	180
Bse1I	ACTGG	1 cut(s)	78
Bse3DI	GCAATG	2 cut(s)	919, 1137
Bse8I	GATNNNNATC	1 cut(s)	1184
BseBI	CCWGG	1 cut(s)	586
BseDI	CCNNGG	3 cut(s)	273, 585, 1113
BseGI	GGATG	4 cut(s)	328, 436, 654, 865
BseJI	GATNNNNATC	1 cut(s)	1184
BseMI	GCAATG	2 cut(s)	919, 1137
BseMII	CTCAG	2 cut(s)	728, 1110
BseNI	ACTGG	1 cut(s)	78
BseRI	GAGGAG	3 cut(s)	92, 838, 841
BseSI	GKGCMC	1 cut(s)	1150
BseXI	GCAGC	7 cut(s)	37, 65, 144, 218, 391, 827, 838
Bsh1236I	CGCG	2 cut(s)	275, 1299
BshFI	GGCC	2 cut(s)	88, 584
BshTI	ACCGGT	1 cut(s)	180
BsiHKAI	GWGCWC	1 cut(s)	1150
BsiSI	CCGG	1 cut(s)	181
BslFI	GGGAC	1 cut(s)	277
BsmAI	GTCTC	4 cut(s)	101, 171, 1053, 1073
BsmBI	CGTCTC	1 cut(s)	1053
BsmFI	GGGAC	1 cut(s)	277
BsmI	GAATGC	3 cut(s)	208, 945, 1272
BsnI	GGCC	2 cut(s)	88, 584
Bso31I	GGTCTC	3 cut(s)	101, 171, 1073
Bsp1286I	GDGCHC	1 cut(s)	1150
Bsp143I	GATC	7 cut(s)	379, 448, 541, 599, 610, 1179, 1185
Bsp1720I	GCTNAGC	1 cut(s)	830
BspACI	CCGC	5 cut(s)	273, 275, 839, 1261, 1299
BspANI	GGCC	2 cut(s)	88, 584
BspCNI	CTCAG	2 cut(s)	729, 1111
BspFNI	CGCG	2 cut(s)	275, 1299
BspLI	GGNNCC	1 cut(s)	293
BspMAI	CTGCAG	2 cut(s)	55, 817
BspPI	GGATC	2 cut(s)	605, 1193
BspTNI	GGTCTC	3 cut(s)	101, 171, 1073
BsrDI	GCAATG	2 cut(s)	919, 1137
BsrFI	RCCGGY	1 cut(s)	180
BsrI	ACTGG	1 cut(s)	78
BssAI	RCCGGY	1 cut(s)	180
BssECI	CCNNGG	3 cut(s)	273, 585, 1113
BssMI	GATC	7 cut(s)	379, 448, 541, 599, 610, 1179, 1185
BssT1I	CCWWGG	1 cut(s)	1113
Bst2UI	CCWGG	1 cut(s)	586
Bst4CI	ACNGT	4 cut(s)	291, 574, 696, 963
Bst6I	CTCTTC	3 cut(s)	104, 357, 974
BstBAI	YACGTR	1 cut(s)	1199
BstC8I	GCNNGC	2 cut(s)	270, 337
BstDEI	CTNAG	5 cut(s)	425, 455, 737, 830, 1119
BstDSI	CCRYGG	1 cut(s)	273
BstF5I	GGATG	4 cut(s)	328, 436, 654, 865
BstFNI	CGCG	2 cut(s)	275, 1299
BstHHI	GCGC	1 cut(s)	1299
BstKTI	GATC	7 cut(s)	382, 451, 544, 602, 613, 1182, 1188
BstMAI	GTCTC	4 cut(s)	101, 171, 1053, 1073
BstMBI	GATC	7 cut(s)	379, 448, 541, 599, 610, 1179, 1185
BstMWI	GCNNNNNNNGC	3 cut(s)	451, 460, 1260
BstNI	CCWGG	1 cut(s)	586
BstSCI	CCNGG	1 cut(s)	584
BstSFI	CTRYAG	4 cut(s)	51, 813, 987, 1074
BstSLI	GKGCMC	1 cut(s)	1150
BstUI	CGCG	2 cut(s)	275, 1299
BstV1I	GCAGC	7 cut(s)	37, 65, 144, 218, 391, 827, 838
BstX2I	RGATCY	1 cut(s)	541
BstYI	RGATCY	1 cut(s)	541
BsuI	GTATCC	2 cut(s)	796, 1120
BsuRI	GGCC	2 cut(s)	88, 584
BtgI	CCRYGG	1 cut(s)	273
BtgZI	GCGATG	1 cut(s)	385
BtsCI	GGATG	4 cut(s)	328, 436, 654, 865
BtsIMutI	CAGTG	1 cut(s)	71
Cac8I	GCNNGC	2 cut(s)	270, 337
CaiI	CAGNNNCTG	1 cut(s)	736
CfoI	GCGC	1 cut(s)	1299
Cfr10I	RCCGGY	1 cut(s)	180
Cfr13I	GGNCC	4 cut(s)	8, 291, 582, 724
Cfr42I	CCGCGG	1 cut(s)	276
CseI	GACGC	1 cut(s)	451
Csp6I	GTAC	5 cut(s)	18, 82, 118, 1196, 1325
CspAI	ACCGGT	1 cut(s)	180
CviAII	CATG	6 cut(s)	5, 228, 743, 804, 909, 1128
CviQI	GTAC	5 cut(s)	18, 82, 118, 1196, 1325
DdeI	CTNAG	5 cut(s)	425, 455, 737, 830, 1119
DpnI	GATC	7 cut(s)	381, 450, 543, 601, 612, 1181, 1187
DpnII	GATC	7 cut(s)	379, 448, 541, 599, 610, 1179, 1185
DraI	TTTAAA	1 cut(s)	393
Eam1104I	CTCTTC	3 cut(s)	104, 357, 974
EarI	CTCTTC	3 cut(s)	104, 357, 974
Eco130I	CCWWGG	1 cut(s)	1113
Eco31I	GGTCTC	3 cut(s)	101, 171, 1073
Eco32I	GATATC	2 cut(s)	142, 302
Eco47I	GGWCC	3 cut(s)	8, 291, 724
Eco57I	CTGAAG	2 cut(s)	702, 909
EcoO109I	RGGNCCY	1 cut(s)	582
EcoRI	GAATTC	1 cut(s)	1088
EcoRII	CCWGG	1 cut(s)	584
EcoRV	GATATC	2 cut(s)	142, 302
EcoT14I	CCWWGG	1 cut(s)	1113
EcoT22I	ATGCAT	2 cut(s)	6, 748
ErhI	CCWWGG	1 cut(s)	1113
Esp3I	CGTCTC	1 cut(s)	1053
FaeI	CATG	6 cut(s)	8, 231, 746, 807, 912, 1131
FalI	AAGNNNNNCTT	2 cut(s)	354, 386
FaqI	GGGAC	1 cut(s)	277
FatI	CATG	6 cut(s)	4, 227, 742, 803, 908, 1127
FauI	CCCGC	1 cut(s)	1268
FbaI	TGATCA	2 cut(s)	379, 448
Fnu4HI	GCNGC	8 cut(s)	51, 54, 133, 207, 273, 405, 816, 827
FokI	GGATG	4 cut(s)	335, 443, 641, 872
Fsp4HI	GCNGC	8 cut(s)	51, 54, 133, 207, 273, 405, 816, 827
FspBI	CTAG	2 cut(s)	539, 864
GlaI	GCGC	1 cut(s)	1298
GluI	GCNGC	8 cut(s)	51, 54, 133, 207, 273, 405, 816, 827
GsuI	CTGGAG	2 cut(s)	95, 713
HaeIII	GGCC	2 cut(s)	88, 584
HapII	CCGG	1 cut(s)	181
HgaI	GACGC	1 cut(s)	451
HhaI	GCGC	1 cut(s)	1299
Hin1II	CATG	6 cut(s)	8, 231, 746, 807, 912, 1131
Hin6I	GCGC	1 cut(s)	1297
HinP1I	GCGC	1 cut(s)	1297
HincII	GTYRAC	1 cut(s)	919
HindII	GTYRAC	1 cut(s)	919
HpaII	CCGG	1 cut(s)	181
HphI	GGTGA	3 cut(s)	338, 677, 1272
Hpy166II	GTNNAC	6 cut(s)	11, 118, 422, 919, 1148, 1327
Hpy188I	TCNGA	9 cut(s)	517, 559, 615, 682, 718, 763, 928, 1312, 1334
Hpy188III	TCNNGA	9 cut(s)	39, 126, 371, 688, 730, 889, 896, 1015, 1183
Hpy8I	GTNNAC	6 cut(s)	11, 118, 422, 919, 1148, 1327
HpyAV	CCTTC	1 cut(s)	665
HpyCH4III	ACNGT	4 cut(s)	291, 574, 696, 963
HpyCH4IV	ACGT	2 cut(s)	1198, 1224
HpyF10VI	GCNNNNNNNGC	3 cut(s)	451, 460, 1260
HpyF3I	CTNAG	5 cut(s)	425, 455, 737, 830, 1119
HpySE526I	ACGT	2 cut(s)	1198, 1224
Hsp92II	CATG	6 cut(s)	8, 231, 746, 807, 912, 1131
HspAI	GCGC	1 cut(s)	1297
Ksp22I	TGATCA	2 cut(s)	379, 448
KspI	CCGCGG	1 cut(s)	276
Kzo9I	GATC	7 cut(s)	379, 448, 541, 599, 610, 1179, 1185
LmnI	GCTCC	1 cut(s)	506
Lsp1109I	GCAGC	7 cut(s)	37, 65, 144, 218, 391, 827, 838
LweI	GCATC	4 cut(s)	255, 421, 606, 850
MaeI	CTAG	2 cut(s)	539, 864
MaeII	ACGT	2 cut(s)	1198, 1224
MaeIII	GTNAC	1 cut(s)	1278
MalI	GATC	7 cut(s)	381, 450, 543, 601, 612, 1181, 1187
MboI	GATC	7 cut(s)	379, 448, 541, 599, 610, 1179, 1185
MboII	GAAGA	6 cut(s)	91, 216, 374, 991, 1050, 1240
MflI	RGATCY	1 cut(s)	541
MhlI	GDGCHC	1 cut(s)	1150
MluCI	AATT	8 cut(s)	42, 61, 351, 524, 765, 776, 1082, 1088
MlyI	GAGTC	3 cut(s)	748, 851, 1217
MmeI	TCCRAC	1 cut(s)	945
Mph1103I	ATGCAT	2 cut(s)	6, 748
MroXI	GAANNNNTTC	3 cut(s)	695, 755, 1306
MseI	TTAA	7 cut(s)	60, 234, 318, 392, 578, 779, 1347
MspA1I	CMGCKG	2 cut(s)	275, 1254
MspI	CCGG	1 cut(s)	181
MspR9I	CCNGG	1 cut(s)	586
Mva1269I	GAATGC	3 cut(s)	208, 945, 1272
MvaI	CCWGG	1 cut(s)	586
MvnI	CGCG	2 cut(s)	275, 1299
MwoI	GCNNNNNNNGC	3 cut(s)	451, 460, 1260
NdeII	GATC	7 cut(s)	379, 448, 541, 599, 610, 1179, 1185
NlaIII	CATG	6 cut(s)	8, 231, 746, 807, 912, 1131
NlaIV	GGNNCC	1 cut(s)	293
NmuCI	GTSAC	1 cut(s)	1278
NsiI	ATGCAT	2 cut(s)	6, 748
PctI	GAATGC	3 cut(s)	208, 945, 1272
PdmI	GAANNNNTTC	3 cut(s)	695, 755, 1306
PfeI	GAWTC	7 cut(s)	155, 165, 278, 793, 892, 968, 1060
PinAI	ACCGGT	1 cut(s)	180
PkrI	GCNGC	8 cut(s)	52, 55, 134, 208, 274, 406, 817, 828
PleI	GAGTC	3 cut(s)	747, 850, 1216
PpsI	GAGTC	3 cut(s)	747, 850, 1216
Ppu21I	YACGTR	1 cut(s)	1199
Psp6I	CCWGG	1 cut(s)	584
PspGI	CCWGG	1 cut(s)	584
PspN4I	GGNNCC	1 cut(s)	293
PspPI	GGNCC	4 cut(s)	8, 291, 582, 724
PstI	CTGCAG	2 cut(s)	55, 817
PstNI	CAGNNNCTG	1 cut(s)	736
PsuI	RGATCY	1 cut(s)	541
PvuII	CAGCTG	1 cut(s)	1254
RsaI	GTAC	5 cut(s)	19, 83, 119, 1197, 1326
RsaNI	GTAC	5 cut(s)	18, 82, 118, 1196, 1325
SacII	CCGCGG	1 cut(s)	276
SaqAI	TTAA	7 cut(s)	60, 234, 318, 392, 578, 779, 1347
SatI	GCNGC	8 cut(s)	51, 54, 133, 207, 273, 405, 816, 827
Sau3AI	GATC	7 cut(s)	379, 448, 541, 599, 610, 1179, 1185
Sau96I	GGNCC	4 cut(s)	8, 291, 582, 724
SchI	GAGTC	3 cut(s)	748, 851, 1217
ScrFI	CCNGG	1 cut(s)	586
SduI	GDGCHC	1 cut(s)	1150
SfaNI	GCATC	4 cut(s)	255, 421, 606, 850
SfcI	CTRYAG	4 cut(s)	51, 813, 987, 1074
Sfr303I	CCGCGG	1 cut(s)	276
SgrBI	CCGCGG	1 cut(s)	276
SinI	GGWCC	3 cut(s)	8, 291, 724
SmlI	CTYRAG	2 cut(s)	37, 371
SmoI	CTYRAG	2 cut(s)	37, 371
Sse9I	AATT	8 cut(s)	42, 61, 351, 524, 765, 776, 1082, 1088
SsiI	CCGC	5 cut(s)	273, 275, 839, 1261, 1299
SspI	AATATT	1 cut(s)	756
SspMI	CTAG	2 cut(s)	539, 864
StyD4I	CCNGG	1 cut(s)	584
StyI	CCWWGG	1 cut(s)	1113
TaaI	ACNGT	4 cut(s)	291, 574, 696, 963
TaiI	ACGT	2 cut(s)	1201, 1227
TaqI	TCGA	1 cut(s)	531
TasI	AATT	8 cut(s)	42, 61, 351, 524, 765, 776, 1082, 1088
TatI	WGTACW	3 cut(s)	81, 117, 1324
TauI	GCSGC	1 cut(s)	275
TfiI	GAWTC	7 cut(s)	155, 165, 278, 793, 892, 968, 1060
Tru1I	TTAA	7 cut(s)	60, 234, 318, 392, 578, 779, 1347
Tru9I	TTAA	7 cut(s)	60, 234, 318, 392, 578, 779, 1347
TscAI	CASTG	1 cut(s)	78
TseFI	GTSAC	1 cut(s)	1278
TseI	GCWGC	7 cut(s)	50, 53, 132, 206, 404, 815, 826
Tsp45I	GTSAC	1 cut(s)	1278
TspDTI	ATGAA	6 cut(s)	215, 216, 388, 537, 897, 972
TspGWI	ACGGA	1 cut(s)	961
TspRI	CASTG	1 cut(s)	78
VneI	GTGCAC	1 cut(s)	1146
VpaK11BI	GGWCC	3 cut(s)	8, 291, 724
XapI	RAATTY	3 cut(s)	42, 351, 1088
XmnI	GAANNNNTTC	3 cut(s)	695, 755, 1306
XspI	CTAG	2 cut(s)	539, 864
Zsp2I	ATGCAT	2 cut(s)	6, 748

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.