Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0001101

Physical Location & Seq

Genomic Coordinates Reverse (-)

57297201 .. 57301709

Gene Structure 4509 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG437800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1830 bp

ATGGTACACCCATTTTTGCAAACGAAGAGGTTGGTATTGGAGATCATGATCATCCTGGTGGTGGAAAGCTTGAAACGCATAGGAAATGAAACCAGTTCACAGTTAGAAAAGCCCAGGAGTCTGAGTCAGAAATTCAGGCCAAAGTCTTTCATTGACGTGGTGGGACAAAATGTTGTTGCGAGGTCTCTTTTGGGTGCTATCTCTAGAGGAAGAATAACCTCATTCTATCTTTTCCATGGTCCACAAGGTACAGGAAAGACATCAGCCTCAAGAATTTTTGCTGCAGCACTTAATTGTCTTTCACTGGAGGAGTACAGGCCGTGTGGTCTCTGCTGTGAGTGTAATGTGTACTTTTCTGGAAACAGCAGAGATATCAAGGAAATAGATTCTGTGAGAATCAACCGGAGAGACCGGTTTAGGTGTCTTATTATGAATGCAGCTACACCTCCCGTTTCTTCACGGTTTAAGGTTTTCATCATTGATGAGTGCCACTTGATGCGTGGGGAAACATGGGCGACTATTTTGAGTAGCACCGATAACCTTTCTCAACATGTTGTCTTTGTGATGATCACTCCTGATCTGGATAAGCTGCTGCGGAATCAGTATATCACGGGTAAAAATATCACAATGGGCTTGGCATACGAGCTTATTGGAGCTGTTTCTGATGATGAATTACTCGATTTGCTAGATCTGGCATTGTCATCTGACACTTCTAATACAGTTTTAAGGGCCAGGGAGTTGATGAGATCAAGGATTGATCCGATGCAACTTATATCGCAGTTGGCAAATCTTATTATGGACATCCTAGCTGCTCTATTGCAGCTAAGCTCTGCAGAATCCTCCTCCTCATCGGCTGCTAGTGATACAAAGAGTATGAGAAACACACAAGAGAGAGGGCAGAGCCTCAAGATTCTTGACCCTACTTCATGCAATGTCAACACATCAGACAAGTTGGGAATGCAAAAGGATATTGATGAACAGTTGGATTCCGTATGGAAGAGAGCTATAGATTTATGCCAATCCAAGTCATTCAAGAACTTTTTGAGGAAACAAGGAAGATTGTCATCTCTATTTGTGAATCAAGGTCTCGCTATAGCTGAATTGGAATTCTGCCACCCTGATTATGCATCCAAGGCTGAGAAGTCATGGAAAATCATTGCAAGTGCACTCCAATCTCTATTCGGTTGTAATGTGGAGATCAGGATCGATCTTGTACATGCTACCGAGTCAAAGTATGCAAACGTGAAGAAGCCATCTTTTAGGTTGTTCAGCTGTTCCCGCAGAATGCAGCAAAAGTCACCATCTTTCTGTGAGCGTGGAAGTGGTTCAGACTACTCTGAGTACACATCGGAAAAGCCTATATTAAGTGATGGACGTATTTTACCGCGTTCCTGTGATTGTGCTTCTCAACTGCCACATAACTGCTGTGACAAAATGGTGGTTGAAGAGGGAAGCAACCAGGATTGCCAGGTTTTATCTTTTCATCAACCTGAACATCAACCAAGGTGTTTCCCGAGAACTCTGAGGATTCAAAAGAAGTTTTGTTCCACAGATGCTACTCAGGTGACTTGTTGTACCAAACTACAAAACAAGTTTGCAATCCCAACTAGGCCATCTTTTGACGCCTGTCTTTTGGGAAGCGATTCATATGCTTTCTGCAGCGGCTCTGACAATGGGAACAACGCCGGCAACTATAAGGAAGAGTTGAAGGAAAATTCAGGTGTGCTTTGTTGGAAAACCCTGCTTCCCTCAAGAAAGGATTGGCAGCTGAGGCAACAACAGCAAAATTCGAAACTAGTTGGGTGGGTTCTTCCATGTGCAACTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005663 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_pol3_delta2 DNA_pol3_gamma3

Protein Analysis

609

Amino Acids

68.22

Weight (kDa)

8.71

Isoelectric Point (pI)

46.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_pol3_delta2	PF13177	56 - 198	9.8e-17	DNA polymerase III, delta subunit
AAA	PF00004	76 - 198	6.5e-06	ATPase family associated with various cellular activities (AAA)
DnaA_N-like_STI	PF23007	321 - 404	2.1e-30	STICHEL, DnaA_N-like alpha-beta domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001101)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24790 AT4G24790 AT4G24790 AT4G24790 AT4G24790
fragaria_vesca	FvH4_5g06841
malus_domestica	MD06G1160000.v1.1 MD14G1166000.v1.1
prunus_persica	Prupe.5G160500_v2.0.a1
pyrus_communis	pycom06g14310 pycom14g13860 pycom14g13870
rosa_chinensis	RchiOBHm_Chr7g0191751 RchiOBHm_Chr7g0232131
rosa_laevigata	RLG00000001389 RLG00000001431 RLG00000004429
rosa_multiflora	Rmu_co8050558.1_g000001 Rmu_co8237971.1_g000001 Rmu_co8286355.1_g000001 Rmu_co8458339.1_g000001 Rmu_sc0000616.1_g000013 Rmu_sc0003901.1_g000007 Rmu_sc0012403.1_g000007
rosa_roxburghii	Rroxscaffold_3G00228760 Rroxscaffold_3G00263560 Rroxscaffold_3G00263570 Rroxscaffold_3G00263580
rosa_rugosa	Rorug06G0511100 Rorug07G0265100 Rorug07G0265200 Rorug07G0269600
rosa_samantha	Rh7AG120700 Rh7AG417900 Rh7AG418000 Rh7AG418100 Rh7AG418200 Rh7AG424100 Rh7AG424200 Rh7BG122500 Rh7BG397900 Rh7BG398000 Rh7BG398100 Rh7CG125300 Rh7CG437800 Rh7CG437900 Rh7CG444400 Rh7CG444500 Rh7DG124000 Rh7DG411900 Rh7DG412000 Rh7DG412100 Rh7DG412200 Rh7DG416000 Rh7DG416100 Rh7DG416200
rosa_wichuraiana	Rw7G010290 Rw7G034600 Rw7G035070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	1387
AciI	CCGC	4 cut(s)	595, 1279, 1385, 1662
AclWI	GGATC	2 cut(s)	752, 1211
AcsI	RAATTY	5 cut(s)	131, 273, 1106, 1714, 1786
AcyI	GRCGYC	1 cut(s)	1623
AfaI	GTAC	7 cut(s)	6, 250, 314, 350, 1215, 1343, 1576
AfiI	CCNNNNNNNGG	1 cut(s)	61
AflIII	ACRYGT	1 cut(s)	550
AgeI	ACCGGT	1 cut(s)	411
AgsI	TTSAA	5 cut(s)	73, 1033, 1445, 1532, 1708
AhlI	ACTAGT	1 cut(s)	1795
AjiI	CACGTC	1 cut(s)	157
AjnI	CCWGG	5 cut(s)	54, 113, 731, 1458, 1467
Alw21I	GWGCWC	1 cut(s)	1168
Alw26I	GTCTC	4 cut(s)	189, 332, 402, 1091
Alw44I	GTGCAC	1 cut(s)	1164
AlwI	GGATC	2 cut(s)	752, 1211
Ama87I	CYCGRG	1 cut(s)	1513
AoxI	GGCC	4 cut(s)	137, 317, 729, 1610
ApaLI	GTGCAC	1 cut(s)	1164
ApoI	RAATTY	5 cut(s)	131, 273, 1106, 1714, 1786
AsiGI	ACCGGT	1 cut(s)	411
Asp700I	GAANNNNTTC	2 cut(s)	1324, 1642
AspS9I	GGNCC	2 cut(s)	239, 729
AsuHPI	GGTGA	2 cut(s)	1290, 1576
AsuII	TTCGAA	1 cut(s)	1790
AvaI	CYCGRG	1 cut(s)	1513
AvaII	GGWCC	1 cut(s)	239
BaeGI	GKGCMC	1 cut(s)	1168
Bbv12I	GWGCWC	1 cut(s)	1168
BbvCI	CCTCAGC	1 cut(s)	1769
BccI	CCATC	4 cut(s)	1261, 1309, 1364, 1621
BceAI	ACGGC	1 cut(s)	304
BcgI	CGANNNNNNTGC	2 cut(s)	1631, 1665
BciT130I	CCWGG	5 cut(s)	56, 115, 733, 1460, 1469
BclI	TGATCA	2 cut(s)	48, 567
BcoDI	GTCTC	4 cut(s)	189, 332, 402, 1091
BcuI	ACTAGT	1 cut(s)	1795
BfaI	CTAG	6 cut(s)	204, 686, 806, 858, 1608, 1796
BfmI	CTRYAG	5 cut(s)	282, 831, 1005, 1092, 1657
BglII	AGATCT	1 cut(s)	688
BlpI	GCTNAGC	1 cut(s)	824
Bme1390I	CCNGG	5 cut(s)	56, 115, 733, 1460, 1469
Bme18I	GGWCC	1 cut(s)	239
BmeT110I	CYCGRG	1 cut(s)	1513
BmgBI	CACGTC	1 cut(s)	157
BmgT120I	GGNCC	2 cut(s)	239, 729
BmrFI	CCNGG	5 cut(s)	56, 115, 733, 1460, 1469
BmsI	GCATC	4 cut(s)	486, 753, 1136, 1543
BoxI	GACNNNNGTC	1 cut(s)	1626
BpmI	CTGGAG	1 cut(s)	326
Bpu10I	CCTNAGC	1 cut(s)	1769
Bpu1102I	GCTNAGC	1 cut(s)	824
Bpu14I	TTCGAA	1 cut(s)	1790
BpuEI	CTTGAG	3 cut(s)	253, 890, 1735
Bsa29I	ATCGAT	1 cut(s)	1206
BsaBI	GATNNNNATC	3 cut(s)	47, 1063, 1202
BsaHI	GRCGYC	1 cut(s)	1623
BsaI	GGTCTC	4 cut(s)	189, 332, 402, 1091
BsaJI	CCNNGG	5 cut(s)	113, 235, 732, 1131, 1502
BsaWI	WCCGGW	2 cut(s)	402, 411
BsaXI	ACNNNNNCTCC	2 cut(s)	109, 139
Bsc4I	CCNNNNNNNGG	1 cut(s)	61
Bse118I	RCCGGY	2 cut(s)	411, 1685
Bse1I	ACTGG	2 cut(s)	93, 309
Bse3DI	GCAATG	2 cut(s)	937, 1155
Bse8I	GATNNNNATC	3 cut(s)	47, 1063, 1202
BseBI	CCWGG	5 cut(s)	56, 115, 733, 1460, 1469
BseCI	ATCGAT	1 cut(s)	1206
BseDI	CCNNGG	5 cut(s)	113, 235, 732, 1131, 1502
BseGI	GGATG	3 cut(s)	51, 801, 1127
BseJI	GATNNNNATC	3 cut(s)	47, 1063, 1202
BseLI	CCNNNNNNNGG	1 cut(s)	61
BseMI	GCAATG	2 cut(s)	937, 1155
BseMII	CTCAG	6 cut(s)	113, 1128, 1329, 1514, 1574, 1760
BseNI	ACTGG	2 cut(s)	93, 309
BseRI	GAGGAG	3 cut(s)	323, 832, 835
BseSI	GKGCMC	1 cut(s)	1168
Bsh1236I	CGCG	1 cut(s)	1387
BshFI	GGCC	4 cut(s)	139, 319, 731, 1612
BshTI	ACCGGT	1 cut(s)	411
BshVI	ATCGAT	1 cut(s)	1206
BsiHKAI	GWGCWC	1 cut(s)	1168
BsiHKCI	CYCGRG	1 cut(s)	1513
BsiSI	CCGG	3 cut(s)	403, 412, 1686
BslFI	GGGAC	1 cut(s)	177
BslI	CCNNNNNNNGG	1 cut(s)	61
BsmAI	GTCTC	4 cut(s)	189, 332, 402, 1091
BsmFI	GGGAC	1 cut(s)	177
BsmI	GAATGC	3 cut(s)	439, 963, 1290
BsnI	GGCC	4 cut(s)	139, 319, 731, 1612
Bso31I	GGTCTC	4 cut(s)	189, 332, 402, 1091
BsoBI	CYCGRG	1 cut(s)	1513
Bsp119I	TTCGAA	1 cut(s)	1790
Bsp1286I	GDGCHC	1 cut(s)	1168
Bsp1407I	TGTACA	1 cut(s)	1213
Bsp1720I	GCTNAGC	1 cut(s)	824
Bsp19I	CCATGG	1 cut(s)	235
BspACI	CCGC	4 cut(s)	595, 1279, 1385, 1662
BspANI	GGCC	4 cut(s)	139, 319, 731, 1612
BspCNI	CTCAG	6 cut(s)	114, 1129, 1330, 1515, 1573, 1761
BspDI	ATCGAT	1 cut(s)	1206
BspFNI	CGCG	1 cut(s)	1387
BspHI	TCATGA	1 cut(s)	45
BspMAI	CTGCAG	3 cut(s)	286, 835, 1661
BspPI	GGATC	2 cut(s)	752, 1211
BspT104I	TTCGAA	1 cut(s)	1790
BspTNI	GGTCTC	4 cut(s)	189, 332, 402, 1091
BsrDI	GCAATG	2 cut(s)	937, 1155
BsrFI	RCCGGY	2 cut(s)	411, 1685
BsrGI	TGTACA	1 cut(s)	1213
BsrI	ACTGG	2 cut(s)	93, 309
BssAI	RCCGGY	2 cut(s)	411, 1685
BssECI	CCNNGG	5 cut(s)	113, 235, 732, 1131, 1502
BssNI	GRCGYC	1 cut(s)	1623
BssT1I	CCWWGG	3 cut(s)	235, 1131, 1502
Bst2UI	CCWGG	5 cut(s)	56, 115, 733, 1460, 1469
Bst4CI	ACNGT	4 cut(s)	102, 462, 721, 981
Bst6I	CTCTTC	4 cut(s)	20, 992, 1440, 1695
BstACI	GRCGYC	1 cut(s)	1623
BstAUI	TGTACA	1 cut(s)	1213
BstBI	TTCGAA	1 cut(s)	1790
BstC8I	GCNNGC	1 cut(s)	1687
BstDEI	CTNAG	8 cut(s)	122, 824, 1137, 1338, 1523, 1560, 1769, 1827
BstDSI	CCRYGG	1 cut(s)	235
BstF5I	GGATG	3 cut(s)	51, 801, 1127
BstFNI	CGCG	1 cut(s)	1387
BstMAI	GTCTC	4 cut(s)	189, 332, 402, 1091
BstMWI	GCNNNNNNNGC	5 cut(s)	75, 1133, 1278, 1771, 1780
BstNI	CCWGG	5 cut(s)	56, 115, 733, 1460, 1469
BstNSI	RCATGY	2 cut(s)	554, 1220
BstPAI	GACNNNNGTC	1 cut(s)	1626
BstSCI	CCNGG	5 cut(s)	54, 113, 731, 1458, 1467
BstSFI	CTRYAG	5 cut(s)	282, 831, 1005, 1092, 1657
BstSLI	GKGCMC	1 cut(s)	1168
BstUI	CGCG	1 cut(s)	1387
BstX2I	RGATCY	1 cut(s)	688
BstYI	RGATCY	1 cut(s)	688
Bsu15I	ATCGAT	1 cut(s)	1206
BsuRI	GGCC	4 cut(s)	139, 319, 731, 1612
BsuTUI	ATCGAT	1 cut(s)	1206
BtgI	CCRYGG	1 cut(s)	235
BtrI	CACGTC	1 cut(s)	157
BtsCI	GGATG	3 cut(s)	51, 801, 1127
BtsIMutI	CAGTG	1 cut(s)	302
Cac8I	GCNNGC	1 cut(s)	1687
CciI	TCATGA	1 cut(s)	45
Cfr10I	RCCGGY	2 cut(s)	411, 1685
Cfr13I	GGNCC	2 cut(s)	239, 729
ClaI	ATCGAT	1 cut(s)	1206
CseI	GACGC	1 cut(s)	1631
Csp6I	GTAC	7 cut(s)	5, 249, 313, 349, 1214, 1342, 1575
CspAI	ACCGGT	1 cut(s)	411
CviAII	CATG	8 cut(s)	46, 236, 510, 551, 927, 1146, 1217, 1815
CviQI	GTAC	7 cut(s)	5, 249, 313, 349, 1214, 1342, 1575
DdeI	CTNAG	8 cut(s)	122, 824, 1137, 1338, 1523, 1560, 1769, 1827
Eam1104I	CTCTTC	4 cut(s)	20, 992, 1440, 1695
EarI	CTCTTC	4 cut(s)	20, 992, 1440, 1695
Eco130I	CCWWGG	3 cut(s)	235, 1131, 1502
Eco31I	GGTCTC	4 cut(s)	189, 332, 402, 1091
Eco32I	GATATC	1 cut(s)	373
Eco47I	GGWCC	1 cut(s)	239
Eco88I	CYCGRG	1 cut(s)	1513
EcoRI	GAATTC	1 cut(s)	1106
EcoRII	CCWGG	5 cut(s)	54, 113, 731, 1458, 1467
EcoRV	GATATC	1 cut(s)	373
EcoT14I	CCWWGG	3 cut(s)	235, 1131, 1502
EcoT22I	ATGCAT	1 cut(s)	1129
ErhI	CCWWGG	3 cut(s)	235, 1131, 1502
FaeI	CATG	8 cut(s)	49, 239, 513, 554, 930, 1149, 1220, 1818
FaqI	GGGAC	1 cut(s)	177
FatI	CATG	8 cut(s)	45, 235, 509, 550, 926, 1145, 1216, 1814
FauI	CCCGC	1 cut(s)	1286
FauNDI	CATATG	1 cut(s)	1648
FbaI	TGATCA	2 cut(s)	48, 567
FokI	GGATG	3 cut(s)	38, 788, 1114
FspBI	CTAG	6 cut(s)	204, 686, 806, 858, 1608, 1796
GsuI	CTGGAG	1 cut(s)	326
HaeIII	GGCC	4 cut(s)	139, 319, 731, 1612
HapII	CCGG	3 cut(s)	403, 412, 1686
HgaI	GACGC	1 cut(s)	1631
Hin1I	GRCGYC	1 cut(s)	1623
Hin1II	CATG	8 cut(s)	49, 239, 513, 554, 930, 1149, 1220, 1818
HincII	GTYRAC	1 cut(s)	937
HindII	GTYRAC	1 cut(s)	937
HindIII	AAGCTT	1 cut(s)	67
HpaII	CCGG	3 cut(s)	403, 412, 1686
HphI	GGTGA	2 cut(s)	1290, 1576
Hpy166II	GTNNAC	7 cut(s)	7, 98, 242, 349, 937, 1166, 1344
Hpy8I	GTNNAC	7 cut(s)	7, 98, 242, 349, 937, 1166, 1344
HpyAV	CCTTC	1 cut(s)	1702
HpyCH4III	ACNGT	4 cut(s)	102, 462, 721, 981
HpyCH4IV	ACGT	3 cut(s)	156, 1242, 1375
HpyF10VI	GCNNNNNNNGC	5 cut(s)	75, 1133, 1278, 1771, 1780
HpyF3I	CTNAG	8 cut(s)	122, 824, 1137, 1338, 1523, 1560, 1769, 1827
HpySE526I	ACGT	3 cut(s)	156, 1242, 1375
Hsp92I	GRCGYC	1 cut(s)	1623
Hsp92II	CATG	8 cut(s)	49, 239, 513, 554, 930, 1149, 1220, 1818
KroI	GCCGGC	1 cut(s)	1685
KroNI	GCCGGC	1 cut(s)	1687
Ksp22I	TGATCA	2 cut(s)	48, 567
LmnI	GCTCC	1 cut(s)	653
LweI	GCATC	4 cut(s)	486, 753, 1136, 1543
MaeI	CTAG	6 cut(s)	204, 686, 806, 858, 1608, 1796
MaeII	ACGT	3 cut(s)	156, 1242, 1375
MaeIII	GTNAC	3 cut(s)	1296, 1427, 1564
MboII	GAAGA	9 cut(s)	37, 222, 447, 1009, 1068, 1258, 1457, 1712, 1802
MflI	RGATCY	1 cut(s)	688
MhlI	GDGCHC	1 cut(s)	1168
MluCI	AATT	8 cut(s)	131, 273, 292, 671, 1100, 1106, 1714, 1786
MlyI	GAGTC	3 cut(s)	127, 133, 1235
MmeI	TCCRAC	2 cut(s)	963, 1712
Mph1103I	ATGCAT	1 cut(s)	1129
MroNI	GCCGGC	1 cut(s)	1685
MroXI	GAANNNNTTC	2 cut(s)	1324, 1642
MseI	TTAA	4 cut(s)	291, 465, 725, 1364
MslI	CAYNNNNRTG	2 cut(s)	56, 155
MspA1I	CMGCKG	3 cut(s)	1272, 1662, 1768
MspI	CCGG	3 cut(s)	403, 412, 1686
MspR9I	CCNGG	5 cut(s)	56, 115, 733, 1460, 1469
Mva1269I	GAATGC	3 cut(s)	439, 963, 1290
MvaI	CCWGG	5 cut(s)	56, 115, 733, 1460, 1469
MvnI	CGCG	1 cut(s)	1387
MwoI	GCNNNNNNNGC	5 cut(s)	75, 1133, 1278, 1771, 1780
NaeI	GCCGGC	1 cut(s)	1687
NcoI	CCATGG	1 cut(s)	235
NdeI	CATATG	1 cut(s)	1648
NgoMIV	GCCGGC	1 cut(s)	1685
NlaIII	CATG	8 cut(s)	49, 239, 513, 554, 930, 1149, 1220, 1818
NmuCI	GTSAC	3 cut(s)	1296, 1427, 1564
NsiI	ATGCAT	1 cut(s)	1129
NspI	RCATGY	2 cut(s)	554, 1220
NspV	TTCGAA	1 cut(s)	1790
PagI	TCATGA	1 cut(s)	45
PciI	ACATGT	1 cut(s)	550
PctI	GAATGC	3 cut(s)	439, 963, 1290
PdiI	GCCGGC	1 cut(s)	1687
PdmI	GAANNNNTTC	2 cut(s)	1324, 1642
PfeI	GAWTC	9 cut(s)	386, 396, 598, 836, 910, 986, 1078, 1528, 1643
PinAI	ACCGGT	1 cut(s)	411
PleI	GAGTC	3 cut(s)	126, 132, 1234
PpsI	GAGTC	3 cut(s)	126, 132, 1234
PscI	ACATGT	1 cut(s)	550
PshAI	GACNNNNGTC	1 cut(s)	1626
Psp6I	CCWGG	5 cut(s)	54, 113, 731, 1458, 1467
PspGI	CCWGG	5 cut(s)	54, 113, 731, 1458, 1467
PspPI	GGNCC	2 cut(s)	239, 729
PstI	CTGCAG	3 cut(s)	286, 835, 1661
PsuI	RGATCY	1 cut(s)	688
PvuII	CAGCTG	2 cut(s)	1272, 1768
RsaI	GTAC	7 cut(s)	6, 250, 314, 350, 1215, 1343, 1576
RsaNI	GTAC	7 cut(s)	5, 249, 313, 349, 1214, 1342, 1575
RseI	CAYNNNNRTG	2 cut(s)	56, 155
SaqAI	TTAA	4 cut(s)	291, 465, 725, 1364
Sau96I	GGNCC	2 cut(s)	239, 729
SchI	GAGTC	3 cut(s)	127, 133, 1235
ScrFI	CCNGG	5 cut(s)	56, 115, 733, 1460, 1469
SduI	GDGCHC	1 cut(s)	1168
SfaNI	GCATC	4 cut(s)	486, 753, 1136, 1543
SfcI	CTRYAG	5 cut(s)	282, 831, 1005, 1092, 1657
SfuI	TTCGAA	1 cut(s)	1790
SinI	GGWCC	1 cut(s)	239
SmiMI	CAYNNNNRTG	2 cut(s)	56, 155
SmlI	CTYRAG	3 cut(s)	268, 905, 1750
SmoI	CTYRAG	3 cut(s)	268, 905, 1750
SpeI	ACTAGT	1 cut(s)	1795
Sse9I	AATT	8 cut(s)	131, 273, 292, 671, 1100, 1106, 1714, 1786
SsiI	CCGC	4 cut(s)	595, 1279, 1385, 1662
SspMI	CTAG	6 cut(s)	204, 686, 806, 858, 1608, 1796
StyD4I	CCNGG	5 cut(s)	54, 113, 731, 1458, 1467
StyI	CCWWGG	3 cut(s)	235, 1131, 1502
TaaI	ACNGT	4 cut(s)	102, 462, 721, 981
TaiI	ACGT	3 cut(s)	159, 1245, 1378
TaqI	TCGA	3 cut(s)	678, 1206, 1790
TasI	AATT	8 cut(s)	131, 273, 292, 671, 1100, 1106, 1714, 1786
TatI	WGTACW	4 cut(s)	312, 348, 1213, 1341
TauI	GCSGC	1 cut(s)	1665
TfiI	GAWTC	9 cut(s)	386, 396, 598, 836, 910, 986, 1078, 1528, 1643
Tru1I	TTAA	4 cut(s)	291, 465, 725, 1364
Tru9I	TTAA	4 cut(s)	291, 465, 725, 1364
TscAI	CASTG	1 cut(s)	309
TseFI	GTSAC	3 cut(s)	1296, 1427, 1564
Tsp45I	GTSAC	3 cut(s)	1296, 1427, 1564
TspDTI	ATGAA	9 cut(s)	102, 139, 446, 463, 684, 915, 990, 1472, 1635
TspGWI	ACGGA	1 cut(s)	979
TspRI	CASTG	1 cut(s)	309
VneI	GTGCAC	1 cut(s)	1164
VpaK11BI	GGWCC	1 cut(s)	239
XapI	RAATTY	5 cut(s)	131, 273, 1106, 1714, 1786
XbaI	TCTAGA	1 cut(s)	203
XceI	RCATGY	2 cut(s)	554, 1220
XcmI	CCANNNNNNNNNTGG	1 cut(s)	497
XmnI	GAANNNNTTC	2 cut(s)	1324, 1642
XspI	CTAG	6 cut(s)	204, 686, 806, 858, 1608, 1796
Zsp2I	ATGCAT	1 cut(s)	1129

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.