Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0001101

Physical Location & Seq

Genomic Coordinates Reverse (-)

51352068 .. 51356326

Gene Structure 4259 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G034600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2679 bp

ATGGGTGGCGTCATTCTGTTGATATACCTCTCTCCGAAAGCTCTTTTGGTTCTGCCGAGGGTGAGGTCTCTAAGGGATCCATTAACTAATTCTATGAGCAAATTCTCTTCTCCGGTTGAGAATGTTAATTGGGAAACGAATTCGGGTAATGATATCTCTATGCTATTCTTGAATACTTTCCAAGAAGGTGGTTCTGACAATCGTAGTTGTTTGAGGCCAAAGAATTCGGATTTGTATGGACAAATAGAGGAGTGCTTTGATAATTTTGAACTAAACTTGGGTTTAGAAAAGTCTAGGTTGATCCTGCATGAGAATTCAGAGTGGGTTGGAAGCTCAGGGAGTCCTAGGAGCAATCGGGGTGAAAAATTTGATTTTTCAGGGTCAGATAAGGAAGAGGTTTTTAGAAATAAATCACCGATTCAGAGATATAAGAGCAATCATATGGATAAAGGATTGGCCTTGACATGTGTTAAGCCTTGGAGGATGTGGATTATGAAGAAACTATTGCATCAAAATGAAAATCAGTGTAAAAATCGTGTTGAAGTGTCTGGGGCAATTGGTGATTGTAGGAGTCGAACTGGCAGTCCATACCCTTCAGCAGGTGATGCTATTTCAAGCCATGGTACACCCATTTTTGCAAACGAAGAGGTTGGTATTGGAGATCATGATCATCCTGGTGGTGGAAATTTAGATGATATTTCACTTTATGACCACAGAAGCTTGAAACGCATAGGAAATGAAACCAGTTCACAGTTAGAAAAGCCCAGGAGTCTGAGTCAGAAATTCAGGCCAAAGTCTTTCATCGATGTGGTGGGACAAAATGTTGTTGCGAGGTCTCTTTTGGGTGCTGTCTCTAGAGGAAGAATAACCTCATTCTATCTTTTCCATGGTCCACAAGGTACAGGAAAGACATCAGCCTCAAGAATTTTTGCTGCAGCACTTAATTGTCTTTCACTGGAGGAGTACAGGCCGTGTGGTCTCTGCTGCGAGTGTAATGTGTACTTTTCTGGAAACAGCAGAGATATCAAGGAAATAGATTCTGTGAGAATCAATGGGAGAGACCGGTTTAGGTGTCTTATTATGAATGCAGCTACACCTCCCGTTTCTTCACGGTTTAAGGTTTTCATCATTGATGAGTGCCACTTGATGCGTGGGGAAACATGGGCGACTATTTTGAGTAGCACCGATAACCTTTCTCAACATGTTGTCTTTAGATATCACTTCCCAAAGATTAAGGATGGTGATATTGCAAGCAAGTTGGGAAAAATCTGTGTTGAAGAGGGTCTTGAGTTTGATCAGGTTGCTTTAAACTTCATTGCTGCCAAATCAAATGGTTCACTTAGGGATGCAGAGATGATGCTTGATCAGCTAAGTTTGCTTGGTAAAAATATCACAATGGGCTTGGCATACGAGCTTATTGGAGCTGTTTCTGATGATGAATTACTCGATTTGCTAGATCTGGCATTGTCATCTGACACTTCTAATACAGTTTTAAGGGCCAGGGAGTTGATGAGATCAAGGATTGATCCGATGCAACTTACATCGCAGTTGGCAAATCTTATTATGGACATCCTTGCTGGTGAGGAAGGTGGTTCTGAAGTCCAGAAACAGTTCTCTCGTAGGTATACCTGTAAGGTATCCAAGAATCAAACAACATGGCTTACTGCAGCTCTATTGCAGCTAAGCTCTGCAGAATCCTCCTCCTCATTGGATGCTAGTGATACAAAGAGTATGAGAAACACACGAGAGAGCCTCAAGATTCTTGACCCTACTTCATGCAATGTCAACACATCAGACAAGTTGGGAATGCAAAAGGATATGGATGAACAGTTGGAATCCGTATGGAAGAGAGCTATAGATTTATGCCAATCCAAGTCATTCAAGAACTTTTTGAGGAAACAAGGAAGATTGTCGTCTCTATTTGTGAATCAAGGTCTCGCTATAGCTGAATTGGAATTCTGCCACCCTGATTATGCATCCAAGGCTGAGAAGTCATGGAAATCATTGCAAATCAGGATCAATCTTGTACGTGCTACCGAGTCAAATAAAGCAAACGTGAAGAAGCCATCTTTTAGGTTGTTCAGCTGTTCCCGCAGAATGCAACAAAAGTCACCATCTTTCTGTGAGCGTGGAAGTGGTTCAGACTACTCTGACTGCTGTGACAACATGGTGGTTGTAAGTACATTGAGAAATAGTGAAGTTAACGTACTGAGCACAAGAGCGGCCTCATCCTGCAGATCGTTTGAAGACGATACACCAAAGGCACCTGGATTAATGTTTGATCCTTCAAAGGAAGAGGGAAGCAACCAGGACTGCCAGGTTTTATCTTTTCATCAACCTGAACATCAACCAAGGTGTTTCCCGAGAACTCTGAGGATTCAAAAGAAGTTGTGTTCCACAGATGCGACTCAGGTGACTTGTTGTACCAAACTACAAAACAAGTTTGCAGTCCCAACTAGGACATCTTTTGACGCCTGTCTTTTGGGAAGCGATTCATATGCTTTCTGCGGCGGCTCTGACAATGGGAACAACGCCGGCAACTATAAGGAAGAGTTGAAGGAAAATTCAGGTGTGCTTTGTTGGAAAACCCTGCTTCCCTCAAGAAAGGATTGGCAGCTGAGGCAACAACAGCAAAATTCGAAAATAGTTGGGTGGGTTCTTCCATGTGCAAGTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005663 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_pol3_delta2 DNA_pol3_gamma3

Protein Analysis

892

Amino Acids

99.44

Weight (kDa)

8.41

Isoelectric Point (pI)

41.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_pol3_delta2	PF13177	273 - 392	1.2e-13	DNA polymerase III, delta subunit
DNAX_ATPase_lid	PF22608	416 - 456	1.7e-07	DNA polymerase III clamp loader subunit, ATPase lid domain
RCF1-5-like_lid	PF21960	419 - 455	5.9e-06	RCF1/5-like, AAA+ ATPase lid domain
DnaA_N-like_STI	PF23007	604 - 669	3.1e-21	STICHEL, DnaA_N-like alpha-beta domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001101)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24790 AT4G24790 AT4G24790 AT4G24790 AT4G24790
fragaria_vesca	FvH4_5g06841
malus_domestica	MD06G1160000.v1.1 MD14G1166000.v1.1
prunus_persica	Prupe.5G160500_v2.0.a1
pyrus_communis	pycom06g14310 pycom14g13860 pycom14g13870
rosa_chinensis	RchiOBHm_Chr7g0191751 RchiOBHm_Chr7g0232131
rosa_laevigata	RLG00000001389 RLG00000001431 RLG00000004429
rosa_multiflora	Rmu_co8050558.1_g000001 Rmu_co8237971.1_g000001 Rmu_co8286355.1_g000001 Rmu_co8458339.1_g000001 Rmu_sc0000616.1_g000013 Rmu_sc0003901.1_g000007 Rmu_sc0012403.1_g000007
rosa_roxburghii	Rroxscaffold_3G00228760 Rroxscaffold_3G00263560 Rroxscaffold_3G00263570 Rroxscaffold_3G00263580
rosa_rugosa	Rorug06G0511100 Rorug07G0265100 Rorug07G0265200 Rorug07G0269600
rosa_samantha	Rh7AG120700 Rh7AG417900 Rh7AG418000 Rh7AG418100 Rh7AG418200 Rh7AG424100 Rh7AG424200 Rh7BG122500 Rh7BG397900 Rh7BG398000 Rh7BG398100 Rh7CG125300 Rh7CG437800 Rh7CG437900 Rh7CG444400 Rh7CG444500 Rh7DG124000 Rh7DG411900 Rh7DG412000 Rh7DG412100 Rh7DG412200 Rh7DG416000 Rh7DG416100 Rh7DG416200
rosa_wichuraiana	Rw7G010290 Rw7G034600 Rw7G035070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	590
Acc36I	ACCTGC	1 cut(s)	590
AccB1I	GGYRCC	1 cut(s)	2263
AccBSI	CCGCTC	1 cut(s)	2222
AccI	GTMKAC	1 cut(s)	1625
AciI	CCGC	4 cut(s)	2092, 2222, 2508, 2511
AclWI	GGATC	6 cut(s)	71, 84, 295, 1520, 2024, 2276
AcuI	CTGAAG	2 cut(s)	579, 1617
AcyI	GRCGYC	2 cut(s)	9, 2472
AfaI	GTAC	8 cut(s)	625, 901, 965, 1001, 2028, 2182, 2208, 2425
AfiI	CCNNNNNNNGG	2 cut(s)	599, 680
AflIII	ACRYGT	2 cut(s)	464, 1201
AgeI	ACCGGT	1 cut(s)	1062
AjnI	CCWGG	6 cut(s)	673, 764, 1499, 2266, 2307, 2316
AjuI	GAANNNNNNNTTGG	2 cut(s)	29, 61
AloI	GAACNNNNNNTCC	2 cut(s)	568, 600
Alw21I	GWGCWC	1 cut(s)	2216
Alw26I	GTCTC	7 cut(s)	72, 840, 856, 983, 1053, 1920, 1940
AlwI	GGATC	6 cut(s)	71, 84, 295, 1520, 2024, 2276
Ama87I	CYCGRG	1 cut(s)	2362
AoxI	GGCC	6 cut(s)	215, 456, 788, 968, 1497, 2223
ApeKI	GCWGC	8 cut(s)	932, 935, 984, 1088, 1319, 1667, 1678, 2614
ArsI	GACNNNNNNTTYG	2 cut(s)	568, 600
AseI	ATTAAT	1 cut(s)	2273
AsiGI	ACCGGT	1 cut(s)	1062
Asp700I	GAANNNNTTC	4 cut(s)	176, 1610, 2137, 2491
AspA2I	CCTAGG	1 cut(s)	344
AspS9I	GGNCC	2 cut(s)	890, 1497
AsuHPI	GGTGA	9 cut(s)	73, 371, 405, 572, 614, 1253, 1592, 2103, 2425
AsuII	TTCGAA	1 cut(s)	2639
AvaI	CYCGRG	1 cut(s)	2362
AvaII	GGWCC	1 cut(s)	890
AvrII	CCTAGG	1 cut(s)	344
BamHI	GGATCC	1 cut(s)	76
BanI	GGYRCC	1 cut(s)	2263
BarI	GAAGNNNNNNTAC	2 cut(s)	2190, 2222
BauI	CACGAG	1 cut(s)	1743
BbsI	GAAGAC	1 cut(s)	2253
Bbv12I	GWGCWC	1 cut(s)	2216
BbvCI	CCTCAGC	1 cut(s)	2618
BbvI	GCAGC	8 cut(s)	919, 947, 971, 1100, 1306, 1679, 1690, 2626
BccI	CCATC	3 cut(s)	1232, 2074, 2122
BceAI	ACGGC	1 cut(s)	955
BcgI	CGANNNNNNTGC	2 cut(s)	2480, 2514
BciT130I	CCWGG	6 cut(s)	675, 766, 1501, 2268, 2309, 2318
BciVI	GTATCC	1 cut(s)	1648
BclI	TGATCA	3 cut(s)	667, 1294, 1363
BcoDI	GTCTC	7 cut(s)	72, 840, 856, 983, 1053, 1920, 1940
BfaI	CTAG	6 cut(s)	294, 345, 855, 1454, 1716, 2457
BfmI	CTRYAG	6 cut(s)	933, 1665, 1689, 1854, 1941, 2233
BfuAI	ACCTGC	1 cut(s)	590
BfuI	GTATCC	1 cut(s)	1648
BglII	AGATCT	1 cut(s)	1456
BlnI	CCTAGG	1 cut(s)	344
BlpI	GCTNAGC	1 cut(s)	1682
Bme1390I	CCNGG	6 cut(s)	675, 766, 1501, 2268, 2309, 2318
Bme18I	GGWCC	1 cut(s)	890
BmeT110I	CYCGRG	1 cut(s)	2362
BmgT120I	GGNCC	2 cut(s)	890, 1497
BmiI	GGNNCC	2 cut(s)	78, 2265
BmrFI	CCNGG	6 cut(s)	675, 766, 1501, 2268, 2309, 2318
BmsI	GCATC	9 cut(s)	517, 595, 1137, 1336, 1347, 1521, 1702, 1985, 2392
BoxI	GACNNNNGTC	1 cut(s)	2475
BpiI	GAAGAC	1 cut(s)	2253
BplI	GAGNNNNNCTC	2 cut(s)	1737, 1769
BpmI	CTGGAG	1 cut(s)	977
Bpu10I	CCTNAGC	2 cut(s)	334, 2618
Bpu1102I	GCTNAGC	1 cut(s)	1682
Bpu14I	TTCGAA	1 cut(s)	2639
BpuEI	CTTGAG	4 cut(s)	904, 1307, 1739, 2584
Bsa29I	ATCGAT	1 cut(s)	804
BsaAI	YACGTR	1 cut(s)	2030
BsaBI	GATNNNNATC	1 cut(s)	666
BsaHI	GRCGYC	2 cut(s)	9, 2472
BsaI	GGTCTC	5 cut(s)	72, 840, 983, 1053, 1940
BsaJI	CCNNGG	9 cut(s)	56, 344, 476, 619, 764, 886, 1500, 1980, 2351
BsaWI	WCCGGW	2 cut(s)	112, 1062
BsaXI	ACNNNNNCTCC	2 cut(s)	760, 790
Bsc4I	CCNNNNNNNGG	2 cut(s)	599, 680
Bse118I	RCCGGY	2 cut(s)	1062, 2534
Bse1I	ACTGG	3 cut(s)	583, 744, 960
Bse3DI	GCAATG	3 cut(s)	1314, 1786, 2003
Bse8I	GATNNNNATC	1 cut(s)	666
BseBI	CCWGG	6 cut(s)	675, 766, 1501, 2268, 2309, 2318
BseCI	ATCGAT	1 cut(s)	804
BseDI	CCNNGG	9 cut(s)	56, 344, 476, 619, 764, 886, 1500, 1980, 2351
BseGI	GGATG	9 cut(s)	489, 670, 1243, 1351, 1569, 1717, 1828, 1976, 2228
BseJI	GATNNNNATC	1 cut(s)	666
BseLI	CCNNNNNNNGG	2 cut(s)	599, 680
BseMI	GCAATG	3 cut(s)	1314, 1786, 2003
BseMII	CTCAG	7 cut(s)	348, 764, 1977, 2201, 2363, 2423, 2609
BseNI	ACTGG	3 cut(s)	583, 744, 960
BseRI	GAGGAG	4 cut(s)	263, 974, 1690, 1693
BseXI	GCAGC	8 cut(s)	919, 947, 971, 1100, 1306, 1679, 1690, 2626
BshFI	GGCC	6 cut(s)	217, 458, 790, 970, 1499, 2225
BshNI	GGYRCC	1 cut(s)	2263
BshTI	ACCGGT	1 cut(s)	1062
BshVI	ATCGAT	1 cut(s)	804
BsiHKAI	GWGCWC	1 cut(s)	2216
BsiHKCI	CYCGRG	1 cut(s)	2362
BsiSI	CCGG	3 cut(s)	113, 1063, 2535
BslFI	GGGAC	2 cut(s)	828, 2435
BslI	CCNNNNNNNGG	2 cut(s)	599, 680
BsmAI	GTCTC	7 cut(s)	72, 840, 856, 983, 1053, 1920, 1940
BsmBI	CGTCTC	1 cut(s)	1920
BsmFI	GGGAC	2 cut(s)	828, 2435
BsmI	GAATGC	3 cut(s)	1090, 1812, 2103
BsnI	GGCC	6 cut(s)	217, 458, 790, 970, 1499, 2225
Bso31I	GGTCTC	5 cut(s)	72, 840, 983, 1053, 1940
BsoBI	CYCGRG	1 cut(s)	2362
Bsp119I	TTCGAA	1 cut(s)	2639
Bsp1286I	GDGCHC	1 cut(s)	2216
Bsp1720I	GCTNAGC	1 cut(s)	1682
Bsp19I	CCATGG	2 cut(s)	619, 886
BspACI	CCGC	4 cut(s)	2092, 2222, 2508, 2511
BspANI	GGCC	6 cut(s)	217, 458, 790, 970, 1499, 2225
BspCNI	CTCAG	7 cut(s)	347, 765, 1978, 2202, 2364, 2422, 2610
BspDI	ATCGAT	1 cut(s)	804
BspHI	TCATGA	1 cut(s)	664
BspLI	GGNNCC	2 cut(s)	78, 2265
BspMAI	CTGCAG	4 cut(s)	937, 1669, 1693, 2237
BspMI	ACCTGC	1 cut(s)	590
BspPI	GGATC	6 cut(s)	71, 84, 295, 1520, 2024, 2276
BspT104I	TTCGAA	1 cut(s)	2639
BspT107I	GGYRCC	1 cut(s)	2263
BspTNI	GGTCTC	5 cut(s)	72, 840, 983, 1053, 1940
BsrBI	CCGCTC	1 cut(s)	2222
BsrDI	GCAATG	3 cut(s)	1314, 1786, 2003
BsrFI	RCCGGY	2 cut(s)	1062, 2534
BsrI	ACTGG	3 cut(s)	583, 744, 960
BssAI	RCCGGY	2 cut(s)	1062, 2534
BssECI	CCNNGG	9 cut(s)	56, 344, 476, 619, 764, 886, 1500, 1980, 2351
BssNAI	GTATAC	1 cut(s)	1626
BssNI	GRCGYC	2 cut(s)	9, 2472
BssSI	CACGAG	1 cut(s)	1743
BssT1I	CCWWGG	6 cut(s)	344, 476, 619, 886, 1980, 2351
Bst1107I	GTATAC	1 cut(s)	1626
Bst2BI	CACGAG	1 cut(s)	1743
Bst2UI	CCWGG	6 cut(s)	675, 766, 1501, 2268, 2309, 2318
Bst4CI	ACNGT	5 cut(s)	753, 1113, 1489, 1611, 1830
Bst6I	CTCTTC	7 cut(s)	112, 387, 639, 1272, 1841, 2289, 2544
BstACI	GRCGYC	2 cut(s)	9, 2472
BstAPI	GCANNNNNTGC	1 cut(s)	605
BstBAI	YACGTR	1 cut(s)	2030
BstBI	TTCGAA	1 cut(s)	2639
BstC8I	GCNNGC	2 cut(s)	1252, 2536
BstDSI	CCRYGG	2 cut(s)	619, 886
BstENI	CCTNNNNNAGG	1 cut(s)	597
BstF5I	GGATG	9 cut(s)	489, 670, 1243, 1351, 1569, 1717, 1828, 1976, 2228
BstMAI	GTCTC	7 cut(s)	72, 840, 856, 983, 1053, 1920, 1940
BstMWI	GCNNNNNNNGC	8 cut(s)	605, 726, 1366, 1375, 1982, 2091, 2620, 2629
BstNI	CCWGG	6 cut(s)	675, 766, 1501, 2268, 2309, 2318
BstNSI	RCATGY	2 cut(s)	468, 1205
BstPAI	GACNNNNGTC	1 cut(s)	2475
BstSCI	CCNGG	6 cut(s)	673, 764, 1499, 2266, 2307, 2316
BstSFI	CTRYAG	6 cut(s)	933, 1665, 1689, 1854, 1941, 2233
BstV1I	GCAGC	8 cut(s)	919, 947, 971, 1100, 1306, 1679, 1690, 2626
BstV2I	GAAGAC	1 cut(s)	2253
BstX2I	RGATCY	2 cut(s)	76, 1456
BstXI	CCANNNNNNTGG	1 cut(s)	188
BstYI	RGATCY	2 cut(s)	76, 1456
BstZ17I	GTATAC	1 cut(s)	1626
Bsu15I	ATCGAT	1 cut(s)	804
BsuI	GTATCC	1 cut(s)	1648
BsuRI	GGCC	6 cut(s)	217, 458, 790, 970, 1499, 2225
BsuTUI	ATCGAT	1 cut(s)	804
BtgI	CCRYGG	2 cut(s)	619, 886
BtgZI	GCGATG	1 cut(s)	1527
BtsCI	GGATG	9 cut(s)	489, 670, 1243, 1351, 1569, 1717, 1828, 1976, 2228
BtsIMutI	CAGTG	2 cut(s)	530, 953
BveI	ACCTGC	1 cut(s)	590
Cac8I	GCNNGC	2 cut(s)	1252, 2536
CciI	TCATGA	1 cut(s)	664
Cfr10I	RCCGGY	2 cut(s)	1062, 2534
Cfr13I	GGNCC	2 cut(s)	890, 1497
ClaI	ATCGAT	1 cut(s)	804
CseI	GACGC	1 cut(s)	2480
Csp6I	GTAC	8 cut(s)	624, 900, 964, 1000, 2027, 2181, 2207, 2424
CspAI	ACCGGT	1 cut(s)	1062
CviQI	GTAC	8 cut(s)	624, 900, 964, 1000, 2027, 2181, 2207, 2424
DraI	TTTAAA	1 cut(s)	1308
Eam1104I	CTCTTC	7 cut(s)	112, 387, 639, 1272, 1841, 2289, 2544
EarI	CTCTTC	7 cut(s)	112, 387, 639, 1272, 1841, 2289, 2544
Eco130I	CCWWGG	6 cut(s)	344, 476, 619, 886, 1980, 2351
Eco31I	GGTCTC	5 cut(s)	72, 840, 983, 1053, 1940
Eco32I	GATATC	3 cut(s)	154, 1024, 1217
Eco47I	GGWCC	1 cut(s)	890
Eco57I	CTGAAG	2 cut(s)	579, 1617
Eco88I	CYCGRG	1 cut(s)	2362
EcoNI	CCTNNNNNAGG	1 cut(s)	597
EcoRI	GAATTC	4 cut(s)	139, 223, 313, 1955
EcoRII	CCWGG	6 cut(s)	673, 764, 1499, 2266, 2307, 2316
EcoRV	GATATC	3 cut(s)	154, 1024, 1217
EcoT14I	CCWWGG	6 cut(s)	344, 476, 619, 886, 1980, 2351
EcoT22I	ATGCAT	1 cut(s)	1978
ErhI	CCWWGG	6 cut(s)	344, 476, 619, 886, 1980, 2351
Esp3I	CGTCTC	1 cut(s)	1920
FalI	AAGNNNNNCTT	2 cut(s)	1269, 1301
FaqI	GGGAC	2 cut(s)	828, 2435
FauI	CCCGC	1 cut(s)	2099
FauNDI	CATATG	2 cut(s)	441, 2497
FbaI	TGATCA	3 cut(s)	667, 1294, 1363
FblI	GTMKAC	1 cut(s)	1625
FokI	GGATG	9 cut(s)	496, 657, 1250, 1358, 1556, 1724, 1835, 1963, 2215
FspBI	CTAG	6 cut(s)	294, 345, 855, 1454, 1716, 2457
GsuI	CTGGAG	1 cut(s)	977
HaeIII	GGCC	6 cut(s)	217, 458, 790, 970, 1499, 2225
HapII	CCGG	3 cut(s)	113, 1063, 2535
HgaI	GACGC	1 cut(s)	2480
Hin1I	GRCGYC	2 cut(s)	9, 2472
HincII	GTYRAC	2 cut(s)	1786, 2203
HindII	GTYRAC	2 cut(s)	1786, 2203
HindIII	AAGCTT	1 cut(s)	718
HpaI	GTTAAC	1 cut(s)	2203
HpaII	CCGG	3 cut(s)	113, 1063, 2535
HphI	GGTGA	9 cut(s)	73, 371, 405, 572, 614, 1253, 1592, 2103, 2425
Hpy166II	GTNNAC	8 cut(s)	626, 749, 893, 1000, 1337, 1626, 1786, 2203
Hpy8I	GTNNAC	8 cut(s)	626, 749, 893, 1000, 1337, 1626, 1786, 2203
HpyAV	CCTTC	5 cut(s)	179, 603, 1580, 2295, 2551
HpyCH4III	ACNGT	5 cut(s)	753, 1113, 1489, 1611, 1830
HpyCH4IV	ACGT	3 cut(s)	2029, 2055, 2205
HpyF10VI	GCNNNNNNNGC	8 cut(s)	605, 726, 1366, 1375, 1982, 2091, 2620, 2629
HpySE526I	ACGT	3 cut(s)	2029, 2055, 2205
Hsp92I	GRCGYC	2 cut(s)	9, 2472
KroI	GCCGGC	1 cut(s)	2534
KroNI	GCCGGC	1 cut(s)	2536
Ksp22I	TGATCA	3 cut(s)	667, 1294, 1363
KspAI	GTTAAC	1 cut(s)	2203
LmnI	GCTCC	2 cut(s)	348, 1421
Lsp1109I	GCAGC	8 cut(s)	919, 947, 971, 1100, 1306, 1679, 1690, 2626
LweI	GCATC	9 cut(s)	517, 595, 1137, 1336, 1347, 1521, 1702, 1985, 2392
MaeI	CTAG	6 cut(s)	294, 345, 855, 1454, 1716, 2457
MaeII	ACGT	3 cut(s)	2029, 2055, 2205
MaeIII	GTNAC	3 cut(s)	2109, 2159, 2413
MbiI	CCGCTC	1 cut(s)	2222
MfeI	CAATTG	1 cut(s)	555
MflI	RGATCY	2 cut(s)	76, 1456
MhlI	GDGCHC	1 cut(s)	2216
MlyI	GAGTC	6 cut(s)	349, 580, 778, 784, 2048, 2401
MmeI	TCCRAC	3 cut(s)	307, 1812, 2561
Mph1103I	ATGCAT	1 cut(s)	1978
MroNI	GCCGGC	1 cut(s)	2534
MroXI	GAANNNNTTC	4 cut(s)	176, 1610, 2137, 2491
MslI	CAYNNNNRTG	3 cut(s)	513, 675, 806
MspA1I	CMGCKG	2 cut(s)	2085, 2617
MspI	CCGG	3 cut(s)	113, 1063, 2535
MspR9I	CCNGG	6 cut(s)	675, 766, 1501, 2268, 2309, 2318
MunI	CAATTG	1 cut(s)	555
Mva1269I	GAATGC	3 cut(s)	1090, 1812, 2103
MvaI	CCWGG	6 cut(s)	675, 766, 1501, 2268, 2309, 2318
MwoI	GCNNNNNNNGC	8 cut(s)	605, 726, 1366, 1375, 1982, 2091, 2620, 2629
NaeI	GCCGGC	1 cut(s)	2536
NcoI	CCATGG	2 cut(s)	619, 886
NdeI	CATATG	2 cut(s)	441, 2497
NgoMIV	GCCGGC	1 cut(s)	2534
NlaIV	GGNNCC	2 cut(s)	78, 2265
NmeAIII	GCCGAG	1 cut(s)	81
NmuCI	GTSAC	3 cut(s)	2109, 2159, 2413
NsiI	ATGCAT	1 cut(s)	1978
NspI	RCATGY	2 cut(s)	468, 1205
NspV	TTCGAA	1 cut(s)	2639
PagI	TCATGA	1 cut(s)	664
PaqCI	CACCTGC	1 cut(s)	590
PciI	ACATGT	2 cut(s)	464, 1201
PctI	GAATGC	3 cut(s)	1090, 1812, 2103
PdiI	GCCGGC	1 cut(s)	2536
PdmI	GAANNNNTTC	4 cut(s)	176, 1610, 2137, 2491
PinAI	ACCGGT	1 cut(s)	1062
PleI	GAGTC	6 cut(s)	348, 579, 777, 783, 2047, 2401
PpsI	GAGTC	6 cut(s)	348, 579, 777, 783, 2047, 2401
Ppu21I	YACGTR	1 cut(s)	2030
PscI	ACATGT	2 cut(s)	464, 1201
PshAI	GACNNNNGTC	1 cut(s)	2475
PshBI	ATTAAT	1 cut(s)	2273
Psp6I	CCWGG	6 cut(s)	673, 764, 1499, 2266, 2307, 2316
PspGI	CCWGG	6 cut(s)	673, 764, 1499, 2266, 2307, 2316
PspN4I	GGNNCC	2 cut(s)	78, 2265
PspPI	GGNCC	2 cut(s)	890, 1497
PstI	CTGCAG	4 cut(s)	937, 1669, 1693, 2237
PsuI	RGATCY	2 cut(s)	76, 1456
PvuII	CAGCTG	2 cut(s)	2085, 2617
RsaI	GTAC	8 cut(s)	625, 901, 965, 1001, 2028, 2182, 2208, 2425
RsaNI	GTAC	8 cut(s)	624, 900, 964, 1000, 2027, 2181, 2207, 2424
RseI	CAYNNNNRTG	3 cut(s)	513, 675, 806
Sau96I	GGNCC	2 cut(s)	890, 1497
SchI	GAGTC	6 cut(s)	349, 580, 778, 784, 2048, 2401
ScrFI	CCNGG	6 cut(s)	675, 766, 1501, 2268, 2309, 2318
SduI	GDGCHC	1 cut(s)	2216
SfaNI	GCATC	9 cut(s)	517, 595, 1137, 1336, 1347, 1521, 1702, 1985, 2392
SfcI	CTRYAG	6 cut(s)	933, 1665, 1689, 1854, 1941, 2233
SfuI	TTCGAA	1 cut(s)	2639
SinI	GGWCC	1 cut(s)	890
SmiMI	CAYNNNNRTG	3 cut(s)	513, 675, 806
SmlI	CTYRAG	4 cut(s)	919, 1286, 1754, 2599
SmoI	CTYRAG	4 cut(s)	919, 1286, 1754, 2599
SsiI	CCGC	4 cut(s)	2092, 2222, 2508, 2511
SspMI	CTAG	6 cut(s)	294, 345, 855, 1454, 1716, 2457
StyD4I	CCNGG	6 cut(s)	673, 764, 1499, 2266, 2307, 2316
StyI	CCWWGG	6 cut(s)	344, 476, 619, 886, 1980, 2351
TaaI	ACNGT	5 cut(s)	753, 1113, 1489, 1611, 1830
TaiI	ACGT	3 cut(s)	2032, 2058, 2208
TaqI	TCGA	4 cut(s)	574, 804, 1446, 2639
TatI	WGTACW	3 cut(s)	963, 999, 2180
TauI	GCSGC	3 cut(s)	2225, 2511, 2514
TscAI	CASTG	2 cut(s)	530, 960
TseFI	GTSAC	3 cut(s)	2109, 2159, 2413
TseI	GCWGC	8 cut(s)	932, 935, 984, 1088, 1319, 1667, 1678, 2614
Tsp45I	GTSAC	3 cut(s)	2109, 2159, 2413
TspGWI	ACGGA	1 cut(s)	1828
TspRI	CASTG	2 cut(s)	530, 960
VpaK11BI	GGWCC	1 cut(s)	890
VspI	ATTAAT	1 cut(s)	2273
XagI	CCTNNNNNAGG	1 cut(s)	597
XbaI	TCTAGA	1 cut(s)	854
XceI	RCATGY	2 cut(s)	468, 1205
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1148
XmaJI	CCTAGG	1 cut(s)	344
XmiI	GTMKAC	1 cut(s)	1625
XmnI	GAANNNNTTC	4 cut(s)	176, 1610, 2137, 2491
XspI	CTAG	6 cut(s)	294, 345, 855, 1454, 1716, 2457
Zsp2I	ATGCAT	1 cut(s)	1978

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.