DNA polymerase III
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 524 |
| Acc36I | ACCTGC | 1 cut(s) | 524 |
| AccI | GTMKAC | 1 cut(s) | 1541 |
| AciI | CCGC | 1 cut(s) | 1163 |
| AclWI | GGATC | 4 cut(s) | 71, 84, 295, 1436 |
| AcsI | RAATTY | 7 cut(s) | 101, 139, 223, 313, 365, 701, 843 |
| AcuI | CTGAAG | 2 cut(s) | 513, 1533 |
| AcyI | GRCGYC | 1 cut(s) | 9 |
| AfaI | GTAC | 4 cut(s) | 559, 820, 884, 920 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 533 |
| AflIII | ACRYGT | 2 cut(s) | 464, 1120 |
| AgeI | ACCGGT | 1 cut(s) | 981 |
| AgsI | TTSAA | 4 cut(s) | 172, 269, 549, 643 |
| AjnI | CCWGG | 2 cut(s) | 683, 1415 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 29, 61 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 502, 534 |
| AluBI | AGCT | 8 cut(s) | 41, 333, 639, 1010, 1159, 1285, 1330, 1340 |
| AluI | AGCT | 8 cut(s) | 41, 333, 639, 1010, 1159, 1285, 1330, 1340 |
| Alw26I | GTCTC | 5 cut(s) | 72, 759, 775, 902, 972 |
| AlwI | GGATC | 4 cut(s) | 71, 84, 295, 1436 |
| AoxI | GGCC | 5 cut(s) | 215, 456, 707, 887, 1413 |
| ApeKI | GCWGC | 6 cut(s) | 851, 854, 903, 1007, 1159, 1235 |
| ApoI | RAATTY | 7 cut(s) | 101, 139, 223, 313, 365, 701, 843 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 502, 534 |
| AsiGI | ACCGGT | 1 cut(s) | 981 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 176, 1526 |
| AspA2I | CCTAGG | 1 cut(s) | 344 |
| AspS9I | GGNCC | 3 cut(s) | 809, 1181, 1413 |
| AsuHPI | GGTGA | 5 cut(s) | 73, 371, 405, 548, 1508 |
| AvaII | GGWCC | 2 cut(s) | 809, 1181 |
| AvrII | CCTAGG | 1 cut(s) | 344 |
| BamHI | GGATCC | 1 cut(s) | 76 |
| BbvI | GCAGC | 6 cut(s) | 838, 866, 890, 1019, 1146, 1222 |
| BccI | CCATC | 1 cut(s) | 1207 |
| BceAI | ACGGC | 1 cut(s) | 874 |
| BciT130I | CCWGG | 2 cut(s) | 685, 1417 |
| BclI | TGATCA | 3 cut(s) | 601, 1137, 1279 |
| BcoDI | GTCTC | 5 cut(s) | 72, 759, 775, 902, 972 |
| BfaI | CTAG | 4 cut(s) | 294, 345, 774, 1370 |
| BfmI | CTRYAG | 1 cut(s) | 852 |
| BfuAI | ACCTGC | 1 cut(s) | 524 |
| BglII | AGATCT | 1 cut(s) | 1372 |
| BisI | GCNGC | 7 cut(s) | 852, 855, 904, 1008, 1160, 1163, 1236 |
| BlnI | CCTAGG | 1 cut(s) | 344 |
| BlsI | GCNGC | 7 cut(s) | 853, 856, 905, 1009, 1161, 1164, 1237 |
| Bme1390I | CCNGG | 2 cut(s) | 685, 1417 |
| Bme18I | GGWCC | 2 cut(s) | 809, 1181 |
| BmgT120I | GGNCC | 3 cut(s) | 809, 1181, 1413 |
| BmiI | GGNNCC | 1 cut(s) | 78 |
| BmrFI | CCNGG | 2 cut(s) | 685, 1417 |
| BmsI | GCATC | 4 cut(s) | 529, 1056, 1263, 1437 |
| BpmI | CTGGAG | 1 cut(s) | 896 |
| Bpu10I | CCTNAGC | 1 cut(s) | 334 |
| BpuEI | CTTGAG | 1 cut(s) | 823 |
| Bsa29I | ATCGAT | 1 cut(s) | 723 |
| BsaBI | GATNNNNATC | 1 cut(s) | 600 |
| BsaHI | GRCGYC | 1 cut(s) | 9 |
| BsaI | GGTCTC | 4 cut(s) | 72, 759, 902, 972 |
| BsaJI | CCNNGG | 6 cut(s) | 56, 344, 553, 683, 805, 1416 |
| BsaWI | WCCGGW | 2 cut(s) | 112, 981 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 679, 709 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 533 |
| Bse118I | RCCGGY | 1 cut(s) | 981 |
| Bse1I | ACTGG | 3 cut(s) | 517, 663, 879 |
| Bse3DI | GCAATG | 1 cut(s) | 1230 |
| Bse8I | GATNNNNATC | 1 cut(s) | 600 |
| BseBI | CCWGG | 2 cut(s) | 685, 1417 |
| BseCI | ATCGAT | 1 cut(s) | 723 |
| BseDI | CCNNGG | 6 cut(s) | 56, 344, 553, 683, 805, 1416 |
| BseGI | GGATG | 5 cut(s) | 489, 604, 1218, 1267, 1485 |
| BseJI | GATNNNNATC | 1 cut(s) | 600 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 533 |
| BseMI | GCAATG | 1 cut(s) | 1230 |
| BseMII | CTCAG | 3 cut(s) | 348, 494, 683 |
| BseNI | ACTGG | 3 cut(s) | 517, 663, 879 |
| BseRI | GAGGAG | 2 cut(s) | 263, 893 |
| BseXI | GCAGC | 6 cut(s) | 838, 866, 890, 1019, 1146, 1222 |
| BshFI | GGCC | 5 cut(s) | 217, 458, 709, 889, 1415 |
| BshTI | ACCGGT | 1 cut(s) | 981 |
| BshVI | ATCGAT | 1 cut(s) | 723 |
| BsiSI | CCGG | 2 cut(s) | 113, 982 |
| BslFI | GGGAC | 1 cut(s) | 747 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 533 |
| BsmAI | GTCTC | 5 cut(s) | 72, 759, 775, 902, 972 |
| BsmFI | GGGAC | 1 cut(s) | 747 |
| BsmI | GAATGC | 1 cut(s) | 1009 |
| BsnI | GGCC | 5 cut(s) | 217, 458, 709, 889, 1415 |
| Bso31I | GGTCTC | 4 cut(s) | 72, 759, 902, 972 |
| Bsp19I | CCATGG | 2 cut(s) | 553, 805 |
| BspACI | CCGC | 1 cut(s) | 1163 |
| BspANI | GGCC | 5 cut(s) | 217, 458, 709, 889, 1415 |
| BspCNI | CTCAG | 3 cut(s) | 347, 495, 684 |
| BspDI | ATCGAT | 1 cut(s) | 723 |
| BspHI | TCATGA | 1 cut(s) | 598 |
| BspLI | GGNNCC | 1 cut(s) | 78 |
| BspMAI | CTGCAG | 1 cut(s) | 856 |
| BspMI | ACCTGC | 1 cut(s) | 524 |
| BspPI | GGATC | 4 cut(s) | 71, 84, 295, 1436 |
| BspTNI | GGTCTC | 4 cut(s) | 72, 759, 902, 972 |
| BsrDI | GCAATG | 1 cut(s) | 1230 |
| BsrFI | RCCGGY | 1 cut(s) | 981 |
| BsrI | ACTGG | 3 cut(s) | 517, 663, 879 |
| BssAI | RCCGGY | 1 cut(s) | 981 |
| BssECI | CCNNGG | 6 cut(s) | 56, 344, 553, 683, 805, 1416 |
| BssNAI | GTATAC | 1 cut(s) | 1542 |
| BssNI | GRCGYC | 1 cut(s) | 9 |
| BssT1I | CCWWGG | 3 cut(s) | 344, 553, 805 |
| Bst1107I | GTATAC | 1 cut(s) | 1542 |
| Bst2UI | CCWGG | 2 cut(s) | 685, 1417 |
| Bst4CI | ACNGT | 5 cut(s) | 672, 1032, 1181, 1405, 1527 |
| Bst6I | CTCTTC | 4 cut(s) | 112, 387, 573, 1260 |
| BstACI | GRCGYC | 1 cut(s) | 9 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 539 |
| BstDEI | CTNAG | 6 cut(s) | 71, 334, 503, 692, 1256, 1286 |
| BstDSI | CCRYGG | 2 cut(s) | 553, 805 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 531 |
| BstF5I | GGATG | 5 cut(s) | 489, 604, 1218, 1267, 1485 |
| BstMAI | GTCTC | 5 cut(s) | 72, 759, 775, 902, 972 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 539, 645, 1282, 1291 |
| BstNI | CCWGG | 2 cut(s) | 685, 1417 |
| BstNSI | RCATGY | 2 cut(s) | 468, 1124 |
| BstSCI | CCNGG | 2 cut(s) | 683, 1415 |
| BstSFI | CTRYAG | 1 cut(s) | 852 |
| BstV1I | GCAGC | 6 cut(s) | 838, 866, 890, 1019, 1146, 1222 |
| BstX2I | RGATCY | 2 cut(s) | 76, 1372 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 188 |
| BstYI | RGATCY | 2 cut(s) | 76, 1372 |
| BstZ17I | GTATAC | 1 cut(s) | 1542 |
| Bsu15I | ATCGAT | 1 cut(s) | 723 |
| BsuRI | GGCC | 5 cut(s) | 217, 458, 709, 889, 1415 |
| BsuTUI | ATCGAT | 1 cut(s) | 723 |
| BtgI | CCRYGG | 2 cut(s) | 553, 805 |
| BtsCI | GGATG | 5 cut(s) | 489, 604, 1218, 1267, 1485 |
| BtsIMutI | CAGTG | 2 cut(s) | 872, 1028 |
| BveI | ACCTGC | 1 cut(s) | 524 |
| CciI | TCATGA | 1 cut(s) | 598 |
| Cfr10I | RCCGGY | 1 cut(s) | 981 |
| Cfr13I | GGNCC | 3 cut(s) | 809, 1181, 1413 |
| ClaI | ATCGAT | 1 cut(s) | 723 |
| CpoI | CGGWCCG | 1 cut(s) | 1181 |
| Csp6I | GTAC | 4 cut(s) | 558, 819, 883, 919 |
| CspAI | ACCGGT | 1 cut(s) | 981 |
| CspI | CGGWCCG | 1 cut(s) | 1181 |
| CviAII | CATG | 7 cut(s) | 308, 465, 554, 599, 806, 1080, 1121 |
| CviQI | GTAC | 4 cut(s) | 558, 819, 883, 919 |
| DdeI | CTNAG | 6 cut(s) | 71, 334, 503, 692, 1256, 1286 |
| DraI | TTTAAA | 1 cut(s) | 1224 |
| Eam1104I | CTCTTC | 4 cut(s) | 112, 387, 573, 1260 |
| EarI | CTCTTC | 4 cut(s) | 112, 387, 573, 1260 |
| Eco130I | CCWWGG | 3 cut(s) | 344, 553, 805 |
| Eco31I | GGTCTC | 4 cut(s) | 72, 759, 902, 972 |
| Eco32I | GATATC | 3 cut(s) | 154, 943, 1192 |
| Eco47I | GGWCC | 2 cut(s) | 809, 1181 |
| Eco57I | CTGAAG | 2 cut(s) | 513, 1533 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 531 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1413 |
| EcoRI | GAATTC | 3 cut(s) | 139, 223, 313 |
| EcoRII | CCWGG | 2 cut(s) | 683, 1415 |
| EcoRV | GATATC | 3 cut(s) | 154, 943, 1192 |
| EcoT14I | CCWWGG | 3 cut(s) | 344, 553, 805 |
| ErhI | CCWWGG | 3 cut(s) | 344, 553, 805 |
| FaeI | CATG | 7 cut(s) | 311, 468, 557, 602, 809, 1083, 1124 |
| FaqI | GGGAC | 1 cut(s) | 747 |
| FatI | CATG | 7 cut(s) | 307, 464, 553, 598, 805, 1079, 1120 |
| FauNDI | CATATG | 1 cut(s) | 441 |
| FbaI | TGATCA | 3 cut(s) | 601, 1137, 1279 |
| FblI | GTMKAC | 1 cut(s) | 1541 |
| Fnu4HI | GCNGC | 7 cut(s) | 852, 855, 904, 1008, 1160, 1163, 1236 |
| FokI | GGATG | 5 cut(s) | 496, 591, 1225, 1274, 1472 |
| Fsp4HI | GCNGC | 7 cut(s) | 852, 855, 904, 1008, 1160, 1163, 1236 |
| FspBI | CTAG | 4 cut(s) | 294, 345, 774, 1370 |
| GluI | GCNGC | 7 cut(s) | 852, 855, 904, 1008, 1160, 1163, 1236 |
| GsuI | CTGGAG | 1 cut(s) | 896 |
| HaeIII | GGCC | 5 cut(s) | 217, 458, 709, 889, 1415 |
| HapII | CCGG | 2 cut(s) | 113, 982 |
| Hin1I | GRCGYC | 1 cut(s) | 9 |
| Hin1II | CATG | 7 cut(s) | 311, 468, 557, 602, 809, 1083, 1124 |
| HindIII | AAGCTT | 1 cut(s) | 637 |
| HinfI | GANTC | 8 cut(s) | 340, 418, 505, 688, 694, 956, 966, 1168 |
| HpaII | CCGG | 2 cut(s) | 113, 982 |
| HphI | GGTGA | 5 cut(s) | 73, 371, 405, 548, 1508 |
| Hpy166II | GTNNAC | 6 cut(s) | 560, 668, 812, 919, 1253, 1542 |
| Hpy188III | TCNNGA | 8 cut(s) | 169, 599, 608, 840, 927, 1145, 1151, 1519 |
| Hpy8I | GTNNAC | 6 cut(s) | 560, 668, 812, 919, 1253, 1542 |
| HpyAV | CCTTC | 3 cut(s) | 179, 537, 1496 |
| HpyCH4III | ACNGT | 5 cut(s) | 672, 1032, 1181, 1405, 1527 |
| HpyCH4V | TGCA | 5 cut(s) | 307, 572, 854, 1007, 1450 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 539, 645, 1282, 1291 |
| HpyF3I | CTNAG | 6 cut(s) | 71, 334, 503, 692, 1256, 1286 |
| Hsp92I | GRCGYC | 1 cut(s) | 9 |
| Hsp92II | CATG | 7 cut(s) | 311, 468, 557, 602, 809, 1083, 1124 |
| Ksp22I | TGATCA | 3 cut(s) | 601, 1137, 1279 |
| LmnI | GCTCC | 2 cut(s) | 348, 1337 |
| Lsp1109I | GCAGC | 6 cut(s) | 838, 866, 890, 1019, 1146, 1222 |
| LweI | GCATC | 4 cut(s) | 529, 1056, 1263, 1437 |
| MaeI | CTAG | 4 cut(s) | 294, 345, 774, 1370 |
| MboII | GAAGA | 7 cut(s) | 99, 404, 508, 590, 792, 1017, 1277 |
| MflI | RGATCY | 2 cut(s) | 76, 1372 |
| MlyI | GAGTC | 4 cut(s) | 349, 514, 697, 703 |
| MmeI | TCCRAC | 1 cut(s) | 307 |
| MroXI | GAANNNNTTC | 2 cut(s) | 176, 1526 |
| MseI | TTAA | 8 cut(s) | 83, 126, 471, 861, 1035, 1208, 1223, 1409 |
| MslI | CAYNNNNRTG | 1 cut(s) | 725 |
| MspI | CCGG | 2 cut(s) | 113, 982 |
| MspR9I | CCNGG | 2 cut(s) | 685, 1417 |
| Mva1269I | GAATGC | 1 cut(s) | 1009 |
| MvaI | CCWGG | 2 cut(s) | 685, 1417 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 539, 645, 1282, 1291 |
| NcoI | CCATGG | 2 cut(s) | 553, 805 |
| NdeI | CATATG | 1 cut(s) | 441 |
| NlaIII | CATG | 7 cut(s) | 311, 468, 557, 602, 809, 1083, 1124 |
| NlaIV | GGNNCC | 1 cut(s) | 78 |
| NmeAIII | GCCGAG | 1 cut(s) | 81 |
| NspI | RCATGY | 2 cut(s) | 468, 1124 |
| PagI | TCATGA | 1 cut(s) | 598 |
| PaqCI | CACCTGC | 1 cut(s) | 524 |
| PciI | ACATGT | 2 cut(s) | 464, 1120 |
| PctI | GAATGC | 1 cut(s) | 1009 |
| PdmI | GAANNNNTTC | 2 cut(s) | 176, 1526 |
| PfeI | GAWTC | 4 cut(s) | 418, 956, 966, 1168 |
| PinAI | ACCGGT | 1 cut(s) | 981 |
| PkrI | GCNGC | 7 cut(s) | 853, 856, 905, 1009, 1161, 1164, 1237 |
| PleI | GAGTC | 4 cut(s) | 348, 513, 696, 702 |
| PpsI | GAGTC | 4 cut(s) | 348, 513, 696, 702 |
| PscI | ACATGT | 2 cut(s) | 464, 1120 |
| Psp6I | CCWGG | 2 cut(s) | 683, 1415 |
| PspGI | CCWGG | 2 cut(s) | 683, 1415 |
| PspN4I | GGNNCC | 1 cut(s) | 78 |
| PspPI | GGNCC | 3 cut(s) | 809, 1181, 1413 |
| PstI | CTGCAG | 1 cut(s) | 856 |
| PsuI | RGATCY | 2 cut(s) | 76, 1372 |
| RsaI | GTAC | 4 cut(s) | 559, 820, 884, 920 |
| RsaNI | GTAC | 4 cut(s) | 558, 819, 883, 919 |
| RseI | CAYNNNNRTG | 1 cut(s) | 725 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1181 |
| RsrII | CGGWCCG | 1 cut(s) | 1181 |
| SaqAI | TTAA | 8 cut(s) | 83, 126, 471, 861, 1035, 1208, 1223, 1409 |
| SatI | GCNGC | 7 cut(s) | 852, 855, 904, 1008, 1160, 1163, 1236 |
| Sau96I | GGNCC | 3 cut(s) | 809, 1181, 1413 |
| SchI | GAGTC | 4 cut(s) | 349, 514, 697, 703 |
| ScrFI | CCNGG | 2 cut(s) | 685, 1417 |
| SfaNI | GCATC | 4 cut(s) | 529, 1056, 1263, 1437 |
| SfcI | CTRYAG | 1 cut(s) | 852 |
| SinI | GGWCC | 2 cut(s) | 809, 1181 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 725 |
| SmlI | CTYRAG | 1 cut(s) | 838 |
| SmoI | CTYRAG | 1 cut(s) | 838 |
| SsiI | CCGC | 1 cut(s) | 1163 |
| SspMI | CTAG | 4 cut(s) | 294, 345, 774, 1370 |
| StyD4I | CCNGG | 2 cut(s) | 683, 1415 |
| StyI | CCWWGG | 3 cut(s) | 344, 553, 805 |
| TaaI | ACNGT | 5 cut(s) | 672, 1032, 1181, 1405, 1527 |
| TaqI | TCGA | 3 cut(s) | 508, 723, 1362 |
| TatI | WGTACW | 2 cut(s) | 882, 918 |
| TauI | GCSGC | 1 cut(s) | 1165 |
| TfiI | GAWTC | 4 cut(s) | 418, 956, 966, 1168 |
| Tru1I | TTAA | 8 cut(s) | 83, 126, 471, 861, 1035, 1208, 1223, 1409 |
| Tru9I | TTAA | 8 cut(s) | 83, 126, 471, 861, 1035, 1208, 1223, 1409 |
| TscAI | CASTG | 2 cut(s) | 879, 1035 |
| TseI | GCWGC | 6 cut(s) | 851, 854, 903, 1007, 1159, 1235 |
| TspDTI | ATGAA | 7 cut(s) | 672, 709, 1016, 1033, 1219, 1278, 1368 |
| TspRI | CASTG | 2 cut(s) | 879, 1035 |
| VpaK11BI | GGWCC | 2 cut(s) | 809, 1181 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 531 |
| XapI | RAATTY | 7 cut(s) | 101, 139, 223, 313, 365, 701, 843 |
| XceI | RCATGY | 2 cut(s) | 468, 1124 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1067 |
| XmaJI | CCTAGG | 1 cut(s) | 344 |
| XmiI | GTMKAC | 1 cut(s) | 1541 |
| XmnI | GAANNNNTTC | 2 cut(s) | 176, 1526 |
| XspI | CTAG | 4 cut(s) | 294, 345, 774, 1370 |