RLG00000015526

Leucine aminopeptidase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
67513760 .. 67518045
4286 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015526

Sequence Viewer

Length: 1071 bp
ATGAAGCTCACTTTCGCGACGAAAGAGATTGATGTAACGGAATGGAAAGGGGGCCTGCTTGCGTTTGGTGTTACAGAGAAGGACTTGAGGAAAGATCAGAACTCGAAATTCGAAAATCTGATATTGAAGAAGCTGGATTCTTATTTGGGTGGGGTGTTGGCTGAGGTCTCGACTAAGGAGGACTACACAGGAAAGTCTGGCCAGTCTACGGTTATTAGGCTTCCTGGTCTTGGCTCGAAGAGGGTCGGGCTTGCCCAAGCAACGGAGCCCGCTGCTGTTCGGTTCACGGCAATGGAAACAGTTGCAGGCGGAGGATCCGAGAGGCGGAGAAGGTCGGGGTTCAACAAGTCTGAGTCAGCGATCGAAATCTGGGTTTGGGTCGAAGGACGCCGGAGATTGACGTCAGCTTCTGTTCTGTCACGATCCGATTCGGATGTCTTGGTACTGAAGTTGGAATCGATCACTGCCGGAATGGTGAGAAAGGAATCAAGTGGTGGCTACAACATCAAGACAGGACCTGGCTGTTCAATTGAGCTTATGAAGGTTGATATGAGAGGTTCAGCAAAAGCCATTGGTCAAATCAAACCTTCTGGTGTAGAGGCGCATTTCATTGTCGTAGCTTGTGAGAATATGATAAGTGGAACAGGGATGAGGCCTGGGGACATTGTCACAGCTTCTAATGGAAAGACCATTGAGGTCAATAACACAGATGTTGAAGGCAGACTGACTTTGGCAGATGCATTAGTATATGCATCAGGGATTCCGCATGTCAGGCAAATGTTTTATCATGCATTTAATGGTTACATGGACCATGTTTTCCCACTTGATGAATTAAGGCCTCATTCTTGTGGGGGTGAAGATAGCCTTGGTGGATATGCCCCAACTTTGATTGATGCTTTAGAGACACTAGTTTTACTTGGTGATCGGGGCGGCTTTGCTACCTCTGATGAATGGATTGGTAAAAACCTTCAGTTTAAAATAAATAAGACGAAGAGTTTTCTGACCCTATCAATGGCGTTACATCCCCTGTTTAGATACCTATTATTAGAAAGATGGCTCTGCAAAAGTTGA

Protein Analysis

357

Amino Acids

38.82

Weight (kDa)

8.73

Isoelectric Point (pI)

43.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M17 PF00883 164 - 252 3.1e-28 Cytosol aminopeptidase family, catalytic domain
Glyco_hydro_47 PF01532 260 - 330 1.4e-15 Glycosyl hydrolase family 47
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 404
AccI GTMKAC 1 cut(s) 206
AccII CGCG 1 cut(s) 17
AciI CCGC 5 cut(s) 270, 309, 325, 764, 930
AclWI GGATC 3 cut(s) 309, 322, 417
AcoI YGGCCR 1 cut(s) 199
AcsI RAATTY 1 cut(s) 107
AcuI CTGAAG 2 cut(s) 467, 953
AcyI GRCGYC 2 cut(s) 388, 401
AfaI GTAC 1 cut(s) 444
AfiI CCNNNNNNNGG 5 cut(s) 208, 230, 262, 324, 1012
AgsI TTSAA 4 cut(s) 127, 343, 528, 716
AhlI ACTAGT 1 cut(s) 907
AjnI CCWGG 3 cut(s) 223, 517, 655
AjuI GAANNNNNNNTTGG 2 cut(s) 849, 881
AluBI AGCT 6 cut(s) 7, 133, 407, 535, 620, 674
AluI AGCT 6 cut(s) 7, 133, 407, 535, 620, 674
Alw26I GTCTC 2 cut(s) 172, 896
AlwI GGATC 3 cut(s) 309, 322, 417
AlwNI CAGNNNCTG 2 cut(s) 410, 518
AoxI GGCC 4 cut(s) 52, 199, 653, 836
ApeKI GCWGC 1 cut(s) 272
ApoI RAATTY 1 cut(s) 107
AspLEI GCGC 1 cut(s) 604
AspS9I GGNCC 3 cut(s) 52, 515, 808
AsuHPI GGTGA 3 cut(s) 487, 866, 932
AsuII TTCGAA 1 cut(s) 111
AvaII GGWCC 2 cut(s) 515, 808
BaeI ACNNNNGTAYC 2 cut(s) 434, 467
BalI TGGCCA 1 cut(s) 201
BamHI GGATCC 1 cut(s) 314
BanII GRGCYC 1 cut(s) 270
BbvCI CCTCAGC 1 cut(s) 162
BbvI GCAGC 1 cut(s) 259
BccI CCATC 1 cut(s) 1047
BceAI ACGGC 1 cut(s) 303
BciT130I CCWGG 3 cut(s) 225, 519, 657
BcoDI GTCTC 2 cut(s) 172, 896
BcuI ACTAGT 1 cut(s) 907
BfaI CTAG 1 cut(s) 908
BisI GCNGC 2 cut(s) 273, 931
BlsI GCNGC 2 cut(s) 274, 932
Bme1390I CCNGG 3 cut(s) 225, 519, 657
Bme18I GGWCC 2 cut(s) 515, 808
BmgT120I GGNCC 3 cut(s) 52, 515, 808
BmiI GGNNCC 3 cut(s) 53, 267, 316
BmrFI CCNGG 3 cut(s) 225, 519, 657
BmsI GCATC 3 cut(s) 727, 761, 883
Bpu10I CCTNAGC 1 cut(s) 162
Bpu14I TTCGAA 1 cut(s) 111
BpuEI CTTGAG 1 cut(s) 106
Bsa29I ATCGAT 1 cut(s) 458
BsaBI GATNNNNATC 1 cut(s) 365
BsaHI GRCGYC 2 cut(s) 388, 401
BsaI GGTCTC 1 cut(s) 172
BsaJI CCNNGG 2 cut(s) 656, 865
Bsc4I CCNNNNNNNGG 5 cut(s) 208, 230, 262, 324, 1012
Bse1I ACTGG 1 cut(s) 202
Bse3DI GCAATG 1 cut(s) 297
Bse8I GATNNNNATC 1 cut(s) 365
BseBI CCWGG 3 cut(s) 225, 519, 657
BseCI ATCGAT 1 cut(s) 458
BseDI CCNNGG 2 cut(s) 656, 865
BseGI GGATG 3 cut(s) 439, 654, 1021
BseJI GATNNNNATC 1 cut(s) 365
BseLI CCNNNNNNNGG 5 cut(s) 208, 230, 262, 324, 1012
BseMI GCAATG 1 cut(s) 297
BseMII CTCAG 2 cut(s) 153, 342
BseNI ACTGG 1 cut(s) 202
BseXI GCAGC 1 cut(s) 259
Bsh1236I CGCG 1 cut(s) 17
Bsh1285I CGRYCG 1 cut(s) 363
BshFI GGCC 4 cut(s) 54, 201, 655, 838
BshVI ATCGAT 1 cut(s) 458
BsiEI CGRYCG 1 cut(s) 363
BsiSI CCGG 2 cut(s) 391, 468
BslFI GGGAC 1 cut(s) 674
BslI CCNNNNNNNGG 5 cut(s) 208, 230, 262, 324, 1012
BsmAI GTCTC 2 cut(s) 172, 896
BsmFI GGGAC 1 cut(s) 674
BsnI GGCC 4 cut(s) 54, 201, 655, 838
Bso31I GGTCTC 1 cut(s) 172
Bsp119I TTCGAA 1 cut(s) 111
Bsp1286I GDGCHC 1 cut(s) 270
Bsp143I GATC 6 cut(s) 94, 314, 360, 422, 459, 922
Bsp68I TCGCGA 1 cut(s) 17
BspACI CCGC 5 cut(s) 270, 309, 325, 764, 930
BspANI GGCC 4 cut(s) 54, 201, 655, 838
BspCNI CTCAG 2 cut(s) 154, 343
BspDI ATCGAT 1 cut(s) 458
BspFNI CGCG 1 cut(s) 17
BspLI GGNNCC 3 cut(s) 53, 267, 316
BspPI GGATC 3 cut(s) 309, 322, 417
BspT104I TTCGAA 1 cut(s) 111
BspTNI GGTCTC 1 cut(s) 172
BsrDI GCAATG 1 cut(s) 297
BsrI ACTGG 1 cut(s) 202
BssECI CCNNGG 2 cut(s) 656, 865
BssMI GATC 6 cut(s) 94, 314, 360, 422, 459, 922
BssNI GRCGYC 2 cut(s) 388, 401
BssT1I CCWWGG 1 cut(s) 865
Bst2UI CCWGG 3 cut(s) 225, 519, 657
Bst4CI ACNGT 2 cut(s) 211, 301
Bst6I CTCTTC 2 cut(s) 233, 986
BstACI GRCGYC 2 cut(s) 388, 401
BstBI TTCGAA 1 cut(s) 111
BstC8I GCNNGC 5 cut(s) 56, 60, 252, 270, 307
BstDEI CTNAG 3 cut(s) 162, 174, 351
BstF5I GGATG 3 cut(s) 439, 654, 1021
BstFNI CGCG 1 cut(s) 17
BstHHI GCGC 1 cut(s) 604
BstKTI GATC 6 cut(s) 97, 317, 363, 425, 462, 925
BstMAI GTCTC 2 cut(s) 172, 896
BstMBI GATC 6 cut(s) 94, 314, 360, 422, 459, 922
BstMCI CGRYCG 1 cut(s) 363
BstMWI GCNNNNNNNGC 1 cut(s) 772
BstNI CCWGG 3 cut(s) 225, 519, 657
BstNSI RCATGY 1 cut(s) 770
BstSCI CCNGG 3 cut(s) 223, 517, 655
BstUI CGCG 1 cut(s) 17
BstV1I GCAGC 1 cut(s) 259
BstX2I RGATCY 1 cut(s) 314
BstYI RGATCY 1 cut(s) 314
Bsu15I ATCGAT 1 cut(s) 458
BsuRI GGCC 4 cut(s) 54, 201, 655, 838
BsuTUI ATCGAT 1 cut(s) 458
BtsCI GGATG 3 cut(s) 439, 654, 1021
BtsI GCAGTG 1 cut(s) 462
BtsIMutI CAGTG 1 cut(s) 462
BtuMI TCGCGA 1 cut(s) 17
Cac8I GCNNGC 5 cut(s) 56, 60, 252, 270, 307
CaiI CAGNNNCTG 2 cut(s) 410, 518
CfoI GCGC 1 cut(s) 604
Cfr13I GGNCC 3 cut(s) 52, 515, 808
ClaI ATCGAT 1 cut(s) 458
CseI GACGC 1 cut(s) 396
Csp6I GTAC 1 cut(s) 443
CviAII CATG 4 cut(s) 767, 788, 805, 812
CviQI GTAC 1 cut(s) 443
DdeI CTNAG 3 cut(s) 162, 174, 351
DpnI GATC 6 cut(s) 96, 316, 362, 424, 461, 924
DpnII GATC 6 cut(s) 94, 314, 360, 422, 459, 922
DraI TTTAAA 1 cut(s) 976
EaeI YGGCCR 1 cut(s) 199
Eam1104I CTCTTC 2 cut(s) 233, 986
EarI CTCTTC 2 cut(s) 233, 986
EciI GGCGGA 2 cut(s) 324, 340
Eco130I CCWWGG 1 cut(s) 865
Eco147I AGGCCT 2 cut(s) 655, 838
Eco24I GRGCYC 1 cut(s) 270
Eco31I GGTCTC 1 cut(s) 172
Eco47I GGWCC 2 cut(s) 515, 808
Eco57I CTGAAG 2 cut(s) 467, 953
EcoO109I RGGNCCY 2 cut(s) 52, 515
EcoRII CCWGG 3 cut(s) 223, 517, 655
EcoT14I CCWWGG 1 cut(s) 865
EcoT22I ATGCAT 3 cut(s) 742, 754, 793
EcoT38I GRGCYC 1 cut(s) 270
ErhI CCWWGG 1 cut(s) 865
FaeI CATG 4 cut(s) 770, 791, 808, 815
FalI AAGNNNNNCTT 2 cut(s) 849, 881
FaqI GGGAC 1 cut(s) 674
FatI CATG 4 cut(s) 766, 787, 804, 811
FauI CCCGC 1 cut(s) 277
FblI GTMKAC 1 cut(s) 206
Fnu4HI GCNGC 2 cut(s) 273, 931
FokI GGATG 3 cut(s) 446, 661, 1008
FriOI GRGCYC 1 cut(s) 270
Fsp4HI GCNGC 2 cut(s) 273, 931
FspBI CTAG 1 cut(s) 908
GlaI GCGC 1 cut(s) 603
GluI GCNGC 2 cut(s) 273, 931
HaeIII GGCC 4 cut(s) 54, 201, 655, 838
HapII CCGG 2 cut(s) 391, 468
HgaI GACGC 1 cut(s) 396
HhaI GCGC 1 cut(s) 604
Hin1I GRCGYC 2 cut(s) 388, 401
Hin1II CATG 4 cut(s) 770, 791, 808, 815
Hin6I GCGC 1 cut(s) 602
HinP1I GCGC 1 cut(s) 602
HinfI GANTC 6 cut(s) 137, 353, 428, 455, 485, 760
HpaII CCGG 2 cut(s) 391, 468
HphI GGTGA 3 cut(s) 487, 866, 932
Hpy166II GTNNAC 2 cut(s) 207, 285
Hpy188I TCNGA 8 cut(s) 99, 120, 319, 352, 427, 433, 946, 1002
Hpy188III TCNNGA 4 cut(s) 16, 169, 420, 508
Hpy8I GTNNAC 2 cut(s) 207, 285
Hpy99I CGWCG 1 cut(s) 22
HpyAV CCTTC 7 cut(s) 73, 324, 377, 535, 597, 710, 977
HpyCH4III ACNGT 2 cut(s) 211, 301
HpyCH4IV ACGT 1 cut(s) 401
HpyCH4V TGCA 5 cut(s) 305, 740, 752, 791, 1062
HpyF10VI GCNNNNNNNGC 1 cut(s) 772
HpyF3I CTNAG 3 cut(s) 162, 174, 351
HpySE526I ACGT 1 cut(s) 401
Hsp92I GRCGYC 2 cut(s) 388, 401
Hsp92II CATG 4 cut(s) 770, 791, 808, 815
HspAI GCGC 1 cut(s) 602
Kzo9I GATC 6 cut(s) 94, 314, 360, 422, 459, 922
LmnI GCTCC 1 cut(s) 265
Lsp1109I GCAGC 1 cut(s) 259
LweI GCATC 3 cut(s) 727, 761, 883
MaeI CTAG 1 cut(s) 908
MaeII ACGT 1 cut(s) 401
MaeIII GTNAC 6 cut(s) 34, 70, 417, 667, 800, 1017
MalI GATC 6 cut(s) 96, 316, 362, 424, 461, 924
MboI GATC 6 cut(s) 94, 314, 360, 422, 459, 922
MboII GAAGA 4 cut(s) 139, 250, 869, 1003
MfeI CAATTG 1 cut(s) 528
MflI RGATCY 1 cut(s) 314
MhlI GDGCHC 1 cut(s) 270
MlsI TGGCCA 1 cut(s) 201
MluCI AATT 3 cut(s) 107, 528, 830
MluNI TGGCCA 1 cut(s) 201
MlyI GAGTC 1 cut(s) 362
MmeI TCCRAC 1 cut(s) 432
Mox20I TGGCCA 1 cut(s) 201
Mph1103I ATGCAT 3 cut(s) 742, 754, 793
MscI TGGCCA 1 cut(s) 201
MseI TTAA 3 cut(s) 795, 833, 975
MslI CAYNNNNRTG 2 cut(s) 290, 846
Msp20I TGGCCA 1 cut(s) 201
MspA1I CMGCKG 1 cut(s) 272
MspI CCGG 2 cut(s) 391, 468
MspR9I CCNGG 3 cut(s) 225, 519, 657
MunI CAATTG 1 cut(s) 528
MvaI CCWGG 3 cut(s) 225, 519, 657
MvnI CGCG 1 cut(s) 17
MwoI GCNNNNNNNGC 1 cut(s) 772
NdeII GATC 6 cut(s) 94, 314, 360, 422, 459, 922
NlaIII CATG 4 cut(s) 770, 791, 808, 815
NlaIV GGNNCC 3 cut(s) 53, 267, 316
NmuCI GTSAC 2 cut(s) 417, 667
NruI TCGCGA 1 cut(s) 17
NsiI ATGCAT 3 cut(s) 742, 754, 793
NspI RCATGY 1 cut(s) 770
NspV TTCGAA 1 cut(s) 111
PceI AGGCCT 2 cut(s) 655, 838
PfeI GAWTC 5 cut(s) 137, 428, 455, 485, 760
PflFI GACNNNGTC 1 cut(s) 665
PkrI GCNGC 2 cut(s) 274, 932
Ple19I CGATCG 1 cut(s) 363
PleI GAGTC 1 cut(s) 361
PpsI GAGTC 1 cut(s) 361
PpuMI RGGWCCY 1 cut(s) 515
Psp5II RGGWCCY 1 cut(s) 515
Psp6I CCWGG 3 cut(s) 223, 517, 655
PspGI CCWGG 3 cut(s) 223, 517, 655
PspN4I GGNNCC 3 cut(s) 53, 267, 316
PspPI GGNCC 3 cut(s) 52, 515, 808
PspPPI RGGWCCY 1 cut(s) 515
PstNI CAGNNNCTG 2 cut(s) 410, 518
PsuI RGATCY 1 cut(s) 314
PsyI GACNNNGTC 1 cut(s) 665
PvuI CGATCG 1 cut(s) 363
RruI TCGCGA 1 cut(s) 17
RsaI GTAC 1 cut(s) 444
RsaNI GTAC 1 cut(s) 443
RseI CAYNNNNRTG 2 cut(s) 290, 846
SaqAI TTAA 3 cut(s) 795, 833, 975
SatI GCNGC 2 cut(s) 273, 931
Sau3AI GATC 6 cut(s) 94, 314, 360, 422, 459, 922
Sau96I GGNCC 3 cut(s) 52, 515, 808
SchI GAGTC 1 cut(s) 362
ScrFI CCNGG 3 cut(s) 225, 519, 657
SduI GDGCHC 1 cut(s) 270
SfaNI GCATC 3 cut(s) 727, 761, 883
SfuI TTCGAA 1 cut(s) 111
SinI GGWCC 2 cut(s) 515, 808
SmiMI CAYNNNNRTG 2 cut(s) 290, 846
SmlI CTYRAG 1 cut(s) 85
SmoI CTYRAG 1 cut(s) 85
SpeI ACTAGT 1 cut(s) 907
Sse9I AATT 3 cut(s) 107, 528, 830
SseBI AGGCCT 2 cut(s) 655, 838
SsiI CCGC 5 cut(s) 270, 309, 325, 764, 930
SspMI CTAG 1 cut(s) 908
StuI AGGCCT 2 cut(s) 655, 838
StyD4I CCNGG 3 cut(s) 223, 517, 655
StyI CCWWGG 1 cut(s) 865
TaaI ACNGT 2 cut(s) 211, 301
TaiI ACGT 1 cut(s) 404
TaqI TCGA 7 cut(s) 104, 111, 170, 236, 363, 381, 458
TasI AATT 3 cut(s) 107, 528, 830
TauI GCSGC 1 cut(s) 933
TfiI GAWTC 5 cut(s) 137, 428, 455, 485, 760
Tru1I TTAA 3 cut(s) 795, 833, 975
Tru9I TTAA 3 cut(s) 795, 833, 975
TscAI CASTG 1 cut(s) 469
TseFI GTSAC 2 cut(s) 417, 667
TseI GCWGC 1 cut(s) 272
Tsp45I GTSAC 2 cut(s) 417, 667
TspDTI ATGAA 5 cut(s) 17, 554, 598, 843, 963
TspGWI ACGGA 2 cut(s) 53, 278
TspRI CASTG 1 cut(s) 469
Tth111I GACNNNGTC 1 cut(s) 665
VpaK11BI GGWCC 2 cut(s) 515, 808
XapI RAATTY 1 cut(s) 107
XceI RCATGY 1 cut(s) 770
XmiI GTMKAC 1 cut(s) 206
XspI CTAG 1 cut(s) 908
ZraI GACGTC 1 cut(s) 402
Zsp2I ATGCAT 3 cut(s) 742, 754, 793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.