mediator of RNA polymerase II transcription subunit
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 589 |
| AatII | GACGTC | 1 cut(s) | 382 |
| AccI | GTMKAC | 1 cut(s) | 158 |
| AciI | CCGC | 4 cut(s) | 340, 641, 644, 647 |
| AclWI | GGATC | 1 cut(s) | 393 |
| AcsI | RAATTY | 1 cut(s) | 37 |
| AcuI | CTGAAG | 1 cut(s) | 785 |
| AcyI | GRCGYC | 1 cut(s) | 379 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 48, 145 |
| AflII | CTTAAG | 1 cut(s) | 827 |
| AgsI | TTSAA | 1 cut(s) | 701 |
| AjnI | CCWGG | 3 cut(s) | 306, 393, 602 |
| AluBI | AGCT | 3 cut(s) | 190, 229, 268 |
| AluI | AGCT | 3 cut(s) | 190, 229, 268 |
| Alw21I | GWGCWC | 1 cut(s) | 349 |
| Alw26I | GTCTC | 4 cut(s) | 208, 314, 521, 681 |
| Alw44I | GTGCAC | 1 cut(s) | 345 |
| AlwI | GGATC | 1 cut(s) | 393 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 776 |
| Ama87I | CYCGRG | 2 cut(s) | 239, 838 |
| AoxI | GGCC | 4 cut(s) | 605, 728, 743, 779 |
| ApaLI | GTGCAC | 1 cut(s) | 345 |
| ApeKI | GCWGC | 5 cut(s) | 486, 520, 718, 817, 881 |
| ApoI | RAATTY | 1 cut(s) | 37 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 680, 712 |
| AspLEI | GCGC | 1 cut(s) | 246 |
| AspS9I | GGNCC | 3 cut(s) | 728, 743, 779 |
| AsuC2I | CCSGG | 1 cut(s) | 684 |
| AsuHPI | GGTGA | 1 cut(s) | 176 |
| AsuII | TTCGAA | 1 cut(s) | 403 |
| AvaI | CYCGRG | 2 cut(s) | 239, 838 |
| BaeGI | GKGCMC | 2 cut(s) | 349, 754 |
| BanII | GRGCYC | 2 cut(s) | 510, 839 |
| BbsI | GAAGAC | 1 cut(s) | 669 |
| Bbv12I | GWGCWC | 1 cut(s) | 349 |
| BbvCI | CCTCAGC | 1 cut(s) | 432 |
| BbvI | GCAGC | 5 cut(s) | 473, 507, 705, 804, 868 |
| BccI | CCATC | 1 cut(s) | 526 |
| BceAI | ACGGC | 1 cut(s) | 294 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 362, 396 |
| BciT130I | CCWGG | 3 cut(s) | 308, 395, 604 |
| BcnI | CCSGG | 1 cut(s) | 684 |
| BcoDI | GTCTC | 4 cut(s) | 208, 314, 521, 681 |
| BfaI | CTAG | 2 cut(s) | 671, 693 |
| BfmI | CTRYAG | 2 cut(s) | 216, 906 |
| BfoI | RGCGCY | 1 cut(s) | 247 |
| BfrI | CTTAAG | 1 cut(s) | 827 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 787 |
| BisI | GCNGC | 8 cut(s) | 341, 487, 521, 642, 645, 719, 818, 882 |
| BlsI | GCNGC | 8 cut(s) | 342, 488, 522, 643, 646, 720, 819, 883 |
| Bme1390I | CCNGG | 4 cut(s) | 308, 395, 604, 684 |
| BmeT110I | CYCGRG | 2 cut(s) | 239, 838 |
| BmgT120I | GGNCC | 3 cut(s) | 728, 743, 779 |
| BmiI | GGNNCC | 5 cut(s) | 312, 410, 474, 537, 898 |
| BmrFI | CCNGG | 4 cut(s) | 308, 395, 604, 684 |
| BmrI | ACTGGG | 4 cut(s) | 723, 750, 768, 786 |
| BmsI | GCATC | 2 cut(s) | 12, 843 |
| BmuI | ACTGGG | 4 cut(s) | 723, 750, 768, 786 |
| BpiI | GAAGAC | 1 cut(s) | 669 |
| BpmI | CTGGAG | 2 cut(s) | 545, 650 |
| Bpu10I | CCTNAGC | 1 cut(s) | 432 |
| Bpu14I | TTCGAA | 1 cut(s) | 403 |
| BpuEI | CTTGAG | 1 cut(s) | 494 |
| BpuMI | CCSGG | 1 cut(s) | 684 |
| BsaHI | GRCGYC | 1 cut(s) | 379 |
| BsaI | GGTCTC | 1 cut(s) | 681 |
| BsaJI | CCNNGG | 5 cut(s) | 261, 476, 746, 839, 857 |
| BsaWI | WCCGGW | 2 cut(s) | 411, 538 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 345, 375, 464, 494, 520, 550 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 48, 145 |
| Bse118I | RCCGGY | 1 cut(s) | 607 |
| Bse1I | ACTGG | 5 cut(s) | 625, 718, 745, 763, 781 |
| BseBI | CCWGG | 3 cut(s) | 308, 395, 604 |
| BseDI | CCNNGG | 5 cut(s) | 261, 476, 746, 839, 857 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 48, 145 |
| BseMII | CTCAG | 2 cut(s) | 239, 423 |
| BseNI | ACTGG | 5 cut(s) | 625, 718, 745, 763, 781 |
| BseRI | GAGGAG | 3 cut(s) | 227, 856, 890 |
| BseSI | GKGCMC | 2 cut(s) | 349, 754 |
| BseXI | GCAGC | 5 cut(s) | 473, 507, 705, 804, 868 |
| BseYI | CCCAGC | 2 cut(s) | 47, 565 |
| BshFI | GGCC | 4 cut(s) | 607, 730, 745, 781 |
| BsiHKAI | GWGCWC | 1 cut(s) | 349 |
| BsiHKCI | CYCGRG | 2 cut(s) | 239, 838 |
| BsiSI | CCGG | 4 cut(s) | 412, 539, 608, 683 |
| BslFI | GGGAC | 2 cut(s) | 68, 787 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 48, 145 |
| BsmAI | GTCTC | 4 cut(s) | 208, 314, 521, 681 |
| BsmBI | CGTCTC | 1 cut(s) | 521 |
| BsmFI | GGGAC | 2 cut(s) | 68, 787 |
| BsnI | GGCC | 4 cut(s) | 607, 730, 745, 781 |
| Bso31I | GGTCTC | 1 cut(s) | 681 |
| BsoBI | CYCGRG | 2 cut(s) | 239, 838 |
| Bsp119I | TTCGAA | 1 cut(s) | 403 |
| Bsp1286I | GDGCHC | 4 cut(s) | 349, 510, 754, 839 |
| Bsp143I | GATC | 3 cut(s) | 363, 385, 633 |
| Bsp19I | CCATGG | 1 cut(s) | 261 |
| BspACI | CCGC | 4 cut(s) | 340, 641, 644, 647 |
| BspANI | GGCC | 4 cut(s) | 607, 730, 745, 781 |
| BspCNI | CTCAG | 2 cut(s) | 238, 424 |
| BspLI | GGNNCC | 5 cut(s) | 312, 410, 474, 537, 898 |
| BspMAI | CTGCAG | 1 cut(s) | 910 |
| BspPI | GGATC | 1 cut(s) | 393 |
| BspQI | GCTCTTC | 1 cut(s) | 827 |
| BspT104I | TTCGAA | 1 cut(s) | 403 |
| BspTI | CTTAAG | 1 cut(s) | 827 |
| BspTNI | GGTCTC | 1 cut(s) | 681 |
| BsrFI | RCCGGY | 1 cut(s) | 607 |
| BsrI | ACTGG | 5 cut(s) | 625, 718, 745, 763, 781 |
| BssAI | RCCGGY | 1 cut(s) | 607 |
| BssECI | CCNNGG | 5 cut(s) | 261, 476, 746, 839, 857 |
| BssMI | GATC | 3 cut(s) | 363, 385, 633 |
| BssNI | GRCGYC | 1 cut(s) | 379 |
| BssT1I | CCWWGG | 3 cut(s) | 261, 746, 857 |
| Bst2UI | CCWGG | 3 cut(s) | 308, 395, 604 |
| Bst4CI | ACNGT | 2 cut(s) | 202, 668 |
| Bst6I | CTCTTC | 2 cut(s) | 211, 827 |
| BstACI | GRCGYC | 1 cut(s) | 379 |
| BstAFI | CTTAAG | 1 cut(s) | 827 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 31, 890 |
| BstBI | TTCGAA | 1 cut(s) | 403 |
| BstC8I | GCNNGC | 1 cut(s) | 345 |
| BstDEI | CTNAG | 4 cut(s) | 16, 225, 282, 432 |
| BstDSI | CCRYGG | 1 cut(s) | 261 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 143 |
| BstH2I | RGCGCY | 1 cut(s) | 247 |
| BstHHI | GCGC | 1 cut(s) | 246 |
| BstKTI | GATC | 3 cut(s) | 366, 388, 636 |
| BstMAI | GTCTC | 4 cut(s) | 208, 314, 521, 681 |
| BstMBI | GATC | 3 cut(s) | 363, 385, 633 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 31, 492, 727, 787, 843, 890 |
| BstNI | CCWGG | 3 cut(s) | 308, 395, 604 |
| BstSCI | CCNGG | 4 cut(s) | 306, 393, 602, 682 |
| BstSFI | CTRYAG | 2 cut(s) | 216, 906 |
| BstSLI | GKGCMC | 2 cut(s) | 349, 754 |
| BstV1I | GCAGC | 5 cut(s) | 473, 507, 705, 804, 868 |
| BstV2I | GAAGAC | 1 cut(s) | 669 |
| BstX2I | RGATCY | 1 cut(s) | 385 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 268, 610 |
| BstYI | RGATCY | 1 cut(s) | 385 |
| BsuRI | GGCC | 4 cut(s) | 607, 730, 745, 781 |
| BtgI | CCRYGG | 1 cut(s) | 261 |
| BtsIMutI | CAGTG | 2 cut(s) | 198, 643 |
| Cac8I | GCNNGC | 1 cut(s) | 345 |
| CaiI | CAGNNNCTG | 1 cut(s) | 776 |
| CfoI | GCGC | 1 cut(s) | 246 |
| Cfr10I | RCCGGY | 1 cut(s) | 607 |
| Cfr13I | GGNCC | 3 cut(s) | 728, 743, 779 |
| CseI | GACGC | 1 cut(s) | 501 |
| CsiI | ACCWGGT | 1 cut(s) | 393 |
| CviAII | CATG | 2 cut(s) | 262, 451 |
| DdeI | CTNAG | 4 cut(s) | 16, 225, 282, 432 |
| DpnI | GATC | 3 cut(s) | 365, 387, 635 |
| DpnII | GATC | 3 cut(s) | 363, 385, 633 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 589 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 589 |
| Eam1104I | CTCTTC | 2 cut(s) | 211, 827 |
| EarI | CTCTTC | 2 cut(s) | 211, 827 |
| Eco130I | CCWWGG | 3 cut(s) | 261, 746, 857 |
| Eco24I | GRGCYC | 2 cut(s) | 510, 839 |
| Eco31I | GGTCTC | 1 cut(s) | 681 |
| Eco57I | CTGAAG | 1 cut(s) | 785 |
| Eco88I | CYCGRG | 2 cut(s) | 239, 838 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 143 |
| EcoRI | GAATTC | 1 cut(s) | 37 |
| EcoRII | CCWGG | 3 cut(s) | 306, 393, 602 |
| EcoT14I | CCWWGG | 3 cut(s) | 261, 746, 857 |
| EcoT38I | GRGCYC | 2 cut(s) | 510, 839 |
| ErhI | CCWWGG | 3 cut(s) | 261, 746, 857 |
| Esp3I | CGTCTC | 1 cut(s) | 521 |
| FaeI | CATG | 2 cut(s) | 265, 454 |
| FaqI | GGGAC | 2 cut(s) | 68, 787 |
| FatI | CATG | 2 cut(s) | 261, 450 |
| FauI | CCCGC | 1 cut(s) | 640 |
| FauNDI | CATATG | 1 cut(s) | 886 |
| FblI | GTMKAC | 1 cut(s) | 158 |
| Fnu4HI | GCNGC | 8 cut(s) | 341, 487, 521, 642, 645, 719, 818, 882 |
| FriOI | GRGCYC | 2 cut(s) | 510, 839 |
| Fsp4HI | GCNGC | 8 cut(s) | 341, 487, 521, 642, 645, 719, 818, 882 |
| FspBI | CTAG | 2 cut(s) | 671, 693 |
| GlaI | GCGC | 1 cut(s) | 245 |
| GluI | GCNGC | 8 cut(s) | 341, 487, 521, 642, 645, 719, 818, 882 |
| GsaI | CCCAGC | 2 cut(s) | 51, 569 |
| GsuI | CTGGAG | 2 cut(s) | 545, 650 |
| HaeII | RGCGCY | 1 cut(s) | 247 |
| HaeIII | GGCC | 4 cut(s) | 607, 730, 745, 781 |
| HapII | CCGG | 4 cut(s) | 412, 539, 608, 683 |
| HgaI | GACGC | 1 cut(s) | 501 |
| HhaI | GCGC | 1 cut(s) | 246 |
| Hin1I | GRCGYC | 1 cut(s) | 379 |
| Hin1II | CATG | 2 cut(s) | 265, 454 |
| Hin6I | GCGC | 1 cut(s) | 244 |
| HinP1I | GCGC | 1 cut(s) | 244 |
| HincII | GTYRAC | 2 cut(s) | 594, 711 |
| HindII | GTYRAC | 2 cut(s) | 594, 711 |
| HinfI | GANTC | 2 cut(s) | 418, 918 |
| HpaII | CCGG | 4 cut(s) | 412, 539, 608, 683 |
| HphI | GGTGA | 1 cut(s) | 176 |
| Hpy166II | GTNNAC | 5 cut(s) | 121, 159, 347, 594, 711 |
| Hpy188I | TCNGA | 3 cut(s) | 292, 472, 799 |
| Hpy188III | TCNNGA | 3 cut(s) | 383, 389, 671 |
| Hpy8I | GTNNAC | 5 cut(s) | 121, 159, 347, 594, 711 |
| Hpy99I | CGWCG | 3 cut(s) | 381, 384, 495 |
| HpyAV | CCTTC | 4 cut(s) | 329, 399, 760, 907 |
| HpyCH4III | ACNGT | 2 cut(s) | 202, 668 |
| HpyCH4IV | ACGT | 1 cut(s) | 379 |
| HpyCH4V | TGCA | 6 cut(s) | 25, 347, 373, 820, 884, 908 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 31, 492, 727, 787, 843, 890 |
| HpyF3I | CTNAG | 4 cut(s) | 16, 225, 282, 432 |
| HpySE526I | ACGT | 1 cut(s) | 379 |
| Hsp92I | GRCGYC | 1 cut(s) | 379 |
| Hsp92II | CATG | 2 cut(s) | 265, 454 |
| HspAI | GCGC | 1 cut(s) | 244 |
| Kzo9I | GATC | 3 cut(s) | 363, 385, 633 |
| LguI | GCTCTTC | 1 cut(s) | 827 |
| LmnI | GCTCC | 6 cut(s) | 234, 265, 414, 472, 541, 843 |
| Lsp1109I | GCAGC | 5 cut(s) | 473, 507, 705, 804, 868 |
| LweI | GCATC | 2 cut(s) | 12, 843 |
| MabI | ACCWGGT | 1 cut(s) | 393 |
| MaeI | CTAG | 2 cut(s) | 671, 693 |
| MaeII | ACGT | 1 cut(s) | 379 |
| MaeIII | GTNAC | 1 cut(s) | 650 |
| MalI | GATC | 3 cut(s) | 365, 387, 635 |
| MboI | GATC | 3 cut(s) | 363, 385, 633 |
| MboII | GAAGA | 3 cut(s) | 198, 674, 844 |
| MflI | RGATCY | 1 cut(s) | 385 |
| MhlI | GDGCHC | 4 cut(s) | 349, 510, 754, 839 |
| MluCI | AATT | 2 cut(s) | 37, 701 |
| MlyI | GAGTC | 2 cut(s) | 427, 912 |
| MmeI | TCCRAC | 2 cut(s) | 450, 924 |
| MseI | TTAA | 3 cut(s) | 153, 828, 931 |
| MspCI | CTTAAG | 1 cut(s) | 827 |
| MspI | CCGG | 4 cut(s) | 412, 539, 608, 683 |
| MspR9I | CCNGG | 4 cut(s) | 308, 395, 604, 684 |
| MvaI | CCWGG | 3 cut(s) | 308, 395, 604 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 31, 492, 727, 787, 843, 890 |
| NciI | CCSGG | 1 cut(s) | 684 |
| NcoI | CCATGG | 1 cut(s) | 261 |
| NdeI | CATATG | 1 cut(s) | 886 |
| NdeII | GATC | 3 cut(s) | 363, 385, 633 |
| NlaIII | CATG | 2 cut(s) | 265, 454 |
| NlaIV | GGNNCC | 5 cut(s) | 312, 410, 474, 537, 898 |
| NmeAIII | GCCGAG | 1 cut(s) | 501 |
| NmuCI | GTSAC | 1 cut(s) | 650 |
| NspV | TTCGAA | 1 cut(s) | 403 |
| PaeR7I | CTCGAG | 1 cut(s) | 239 |
| PciSI | GCTCTTC | 1 cut(s) | 827 |
| PkrI | GCNGC | 8 cut(s) | 342, 488, 522, 643, 646, 720, 819, 883 |
| PleI | GAGTC | 2 cut(s) | 426, 912 |
| PpsI | GAGTC | 2 cut(s) | 426, 912 |
| Psp6I | CCWGG | 3 cut(s) | 306, 393, 602 |
| PspFI | CCCAGC | 2 cut(s) | 47, 565 |
| PspGI | CCWGG | 3 cut(s) | 306, 393, 602 |
| PspN4I | GGNNCC | 5 cut(s) | 312, 410, 474, 537, 898 |
| PspPI | GGNCC | 3 cut(s) | 728, 743, 779 |
| PspXI | VCTCGAGB | 1 cut(s) | 239 |
| PstI | CTGCAG | 1 cut(s) | 910 |
| PstNI | CAGNNNCTG | 1 cut(s) | 776 |
| PsuI | RGATCY | 1 cut(s) | 385 |
| SapI | GCTCTTC | 1 cut(s) | 827 |
| SaqAI | TTAA | 3 cut(s) | 153, 828, 931 |
| SatI | GCNGC | 8 cut(s) | 341, 487, 521, 642, 645, 719, 818, 882 |
| Sau3AI | GATC | 3 cut(s) | 363, 385, 633 |
| Sau96I | GGNCC | 3 cut(s) | 728, 743, 779 |
| SbfI | CCTGCAGG | 1 cut(s) | 910 |
| SchI | GAGTC | 2 cut(s) | 427, 912 |
| ScrFI | CCNGG | 4 cut(s) | 308, 395, 604, 684 |
| SdaI | CCTGCAGG | 1 cut(s) | 910 |
| SduI | GDGCHC | 4 cut(s) | 349, 510, 754, 839 |
| SexAI | ACCWGGT | 1 cut(s) | 393 |
| SfaNI | GCATC | 2 cut(s) | 12, 843 |
| SfcI | CTRYAG | 2 cut(s) | 216, 906 |
| Sfr274I | CTCGAG | 1 cut(s) | 239 |
| SfuI | TTCGAA | 1 cut(s) | 403 |
| SlaI | CTCGAG | 1 cut(s) | 239 |
| SmlI | CTYRAG | 3 cut(s) | 239, 509, 827 |
| SmoI | CTYRAG | 3 cut(s) | 239, 509, 827 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 910 |
| Sse9I | AATT | 2 cut(s) | 37, 701 |
| SsiI | CCGC | 4 cut(s) | 340, 641, 644, 647 |
| SspI | AATATT | 1 cut(s) | 30 |
| SspMI | CTAG | 2 cut(s) | 671, 693 |
| StyD4I | CCNGG | 4 cut(s) | 306, 393, 602, 682 |
| StyI | CCWWGG | 3 cut(s) | 261, 746, 857 |
| TaaI | ACNGT | 2 cut(s) | 202, 668 |
| TaiI | ACGT | 1 cut(s) | 382 |
| TaqI | TCGA | 2 cut(s) | 240, 403 |
| TasI | AATT | 2 cut(s) | 37, 701 |
| TauI | GCSGC | 3 cut(s) | 343, 644, 647 |
| Tru1I | TTAA | 3 cut(s) | 153, 828, 931 |
| Tru9I | TTAA | 3 cut(s) | 153, 828, 931 |
| TscAI | CASTG | 2 cut(s) | 205, 643 |
| TseFI | GTSAC | 1 cut(s) | 650 |
| TseI | GCWGC | 5 cut(s) | 486, 520, 718, 817, 881 |
| Tsp45I | GTSAC | 1 cut(s) | 650 |
| TspDTI | ATGAA | 2 cut(s) | 198, 461 |
| TspGWI | ACGGA | 1 cut(s) | 887 |
| TspRI | CASTG | 2 cut(s) | 205, 643 |
| Vha464I | CTTAAG | 1 cut(s) | 827 |
| VneI | GTGCAC | 1 cut(s) | 345 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 143 |
| XapI | RAATTY | 1 cut(s) | 37 |
| XbaI | TCTAGA | 1 cut(s) | 670 |
| XhoI | CTCGAG | 1 cut(s) | 239 |
| XmiI | GTMKAC | 1 cut(s) | 158 |
| XspI | CTAG | 2 cut(s) | 671, 693 |
| ZraI | GACGTC | 1 cut(s) | 380 |