Rmu_sc0001776.1_g000008

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001776.1
Physical Location & Seq
Forward (+)
31692 .. 33865
2174 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001776.1_g000008.1.cds

Sequence Viewer

Length: 1497 bp
atgaagctatcagagtttacatgtttgctcctcctgtgtagctaccaattgacctttcttttaccatgcaacgccaaccaaattgacaacctcaacaggttgatcaaatctcgcagatttagaactaatcgtcctcctcattcgcaatccttcgttgtttcagatgtcaaggatctcgaattttcttctccagtttatgttggaccccaagatgggttgaaggaagctgataagattgatgctttgccaggacaacctaatcttagtcccgaagaaaaatttaatcaatatgcaggctatgttacagtggatcctatagttgggagagcactgttctactactttgtagagtcacctcaaaattcttcaactaaacctctagtgttatggttaaatggaggaccaggatgttcgtcttttgggtatggagccatggaagaattgggacctttcagagttaacagtgatggaaagacattattccagaacgatcatgcttggaacaatggagttgggttctcttattcaaacaacaaatcggactacgaaaacgttggtgacaagagaacggcgaaagactcgtacacatttcttgtaaactggctagagagatttcctcaatacaagagtagagatttcttcataattggagagagctacgctggtcattacgcacctcaacttgctcacaccattctctcaaagaacaacgccacaaagcaaacaaaaatcaatctcaaaggcattgcgattgggaatccttggatccatgacaaggacggcacactaggtggttatgattatttgtggacacatgatttgaactcggacgaaactcatgccggaatacaaaaatattgtgactttgcctcgggtaatatatcgcagacgtgtattatctatatgaacaaatcagccgacgagcttggagacattgatatttacgacatctacgctccacagtgcaacatatcatctggatccaaatatgtctcagaagctccttctgttaatagttttgatccatgctctgataaatatgtggaggactatctaaacctcgccgaggtgaaagcagctcttcatgttaaacccacaaactggacagcttgcaggatggacagacggcccaacaaccattctacccagaataaagcagcttatagcaagtgggatgagtttatggatatacagcccctgggattcggaattatgttgaatgctccctgcagtggagacaccgatgcaaatgtgccaggcacgtcctctagatactccataaacaggctcaagctaccgattgagaagccatggcggccatggaactctaatggagaggttggaggatatgtgattggctacagcgggttaacatttgctacggtaaggggagctggccatatggttcccagctaccaaccacagcgagcactcaccttgatctcatcatttcttcaagggacgctccttcctgccttcccagccaaatcccaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

498

Amino Acids

55.58

Weight (kDa)

6.22

Isoelectric Point (pI)

40.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1101
AciI CCGC 2 cut(s) 1315, 1365
AclI AACGTT 1 cut(s) 552
AclWI GGATC 8 cut(s) 180, 305, 318, 760, 773, 975, 988, 1016
AcoI YGGCCR 2 cut(s) 1316, 1396
AcsI RAATTY 3 cut(s) 179, 278, 361
AdeI CACNNNGTG 1 cut(s) 791
AfaI GTAC 1 cut(s) 584
AfiI CCNNNNNNNGG 8 cut(s) 212, 213, 320, 775, 1066, 1101, 1232, 1284
AflIII ACRYGT 2 cut(s) 20, 890
AgsI TTSAA 6 cut(s) 220, 369, 528, 823, 1219, 1457
AjiI CACGTC 2 cut(s) 891, 1263
AjnI CCWGG 4 cut(s) 247, 403, 1197, 1255
AjuI GAANNNNNNNTTGG 2 cut(s) 39, 71
AloI GAACNNNNNNTCC 2 cut(s) 115, 147
Alw21I GWGCWC 2 cut(s) 331, 1432
Alw26I GTCTC 3 cut(s) 924, 997, 1230
AlwI GGATC 8 cut(s) 180, 305, 318, 760, 773, 975, 988, 1016
AlwNI CAGNNNCTG 1 cut(s) 1198
Ama87I CYCGRG 1 cut(s) 871
AoxI GGCC 3 cut(s) 1127, 1316, 1396
ApeKI GCWGC 2 cut(s) 1076, 1157
ApoI RAATTY 3 cut(s) 179, 278, 361
ArsI GACNNNNNNTTYG 2 cut(s) 802, 834
AspS9I GGNCC 4 cut(s) 203, 401, 446, 1128
AsuHPI GGTGA 4 cut(s) 345, 569, 1081, 1426
AvaI CYCGRG 1 cut(s) 871
AvaII GGWCC 3 cut(s) 203, 401, 446
BalI TGGCCA 1 cut(s) 1398
BamHI GGATCC 3 cut(s) 310, 765, 980
Bbv12I GWGCWC 2 cut(s) 331, 1432
BbvI GCAGC 2 cut(s) 1088, 1169
BccI CCATC 3 cut(s) 206, 461, 1111
BceAI ACGGC 3 cut(s) 585, 796, 1142
BcgI CGANNNNNNTGC 2 cut(s) 821, 855
BciT130I CCWGG 4 cut(s) 249, 405, 1199, 1257
BclI TGATCA 1 cut(s) 102
BcoDI GTCTC 3 cut(s) 924, 997, 1230
BfaI CTAG 4 cut(s) 380, 605, 788, 1269
BfmI CTRYAG 3 cut(s) 315, 1228, 1360
BglI GCCNNNNNGGC 1 cut(s) 1315
BisI GCNGC 3 cut(s) 1077, 1158, 1316
BlsI GCNGC 3 cut(s) 1078, 1159, 1317
Bme1390I CCNGG 4 cut(s) 249, 405, 1199, 1257
Bme18I GGWCC 3 cut(s) 203, 401, 446
BmeT110I CYCGRG 1 cut(s) 871
BmgBI CACGTC 2 cut(s) 891, 1263
BmgT120I GGNCC 4 cut(s) 203, 401, 446, 1128
BmiI GGNNCC 7 cut(s) 205, 312, 430, 447, 767, 982, 1407
BmrFI CCNGG 4 cut(s) 249, 405, 1199, 1257
BmsI GCATC 2 cut(s) 229, 1234
BplI GAGNNNNNCTC 2 cut(s) 601, 633
BpmI CTGGAG 1 cut(s) 174
BpuEI CTTGAG 1 cut(s) 1274
BsaJI CCNNGG 8 cut(s) 432, 761, 870, 1065, 1197, 1198, 1310, 1319
BsaXI ACNNNNNCTCC 2 cut(s) 1335, 1365
Bsc4I CCNNNNNNNGG 8 cut(s) 212, 213, 320, 775, 1066, 1101, 1232, 1284
Bse1I ACTGG 3 cut(s) 191, 605, 1106
Bse3DI GCAATG 1 cut(s) 744
BseBI CCWGG 4 cut(s) 249, 405, 1199, 1257
BseDI CCNNGG 8 cut(s) 432, 761, 870, 1065, 1197, 1198, 1310, 1319
BseGI GGATG 3 cut(s) 413, 1122, 1180
BseLI CCNNNNNNNGG 8 cut(s) 212, 213, 320, 775, 1066, 1101, 1232, 1284
BseMI GCAATG 1 cut(s) 744
BseMII CTCAG 1 cut(s) 1008
BseNI ACTGG 3 cut(s) 191, 605, 1106
BseRI GAGGAG 2 cut(s) 20, 126
BseXI GCAGC 2 cut(s) 1088, 1169
BseYI CCCAGC 2 cut(s) 1409, 1480
BshFI GGCC 3 cut(s) 1129, 1318, 1398
BsiHKAI GWGCWC 2 cut(s) 331, 1432
BsiHKCI CYCGRG 1 cut(s) 871
BsiSI CCGG 1 cut(s) 843
BslFI GGGAC 3 cut(s) 252, 459, 1474
BslI CCNNNNNNNGG 8 cut(s) 212, 213, 320, 775, 1066, 1101, 1232, 1284
BsmAI GTCTC 3 cut(s) 924, 997, 1230
BsmFI GGGAC 3 cut(s) 252, 459, 1474
BsmI GAATGC 1 cut(s) 1225
BsnI GGCC 3 cut(s) 1129, 1318, 1398
BsoBI CYCGRG 1 cut(s) 871
Bsp1286I GDGCHC 2 cut(s) 331, 1432
Bsp143I GATC 8 cut(s) 102, 172, 310, 490, 765, 980, 1021, 1440
Bsp19I CCATGG 3 cut(s) 432, 1310, 1319
BspACI CCGC 2 cut(s) 1315, 1365
BspANI GGCC 3 cut(s) 1129, 1318, 1398
BspCNI CTCAG 1 cut(s) 1007
BspLI GGNNCC 7 cut(s) 205, 312, 430, 447, 767, 982, 1407
BspMAI CTGCAG 1 cut(s) 1232
BspPI GGATC 8 cut(s) 180, 305, 318, 760, 773, 975, 988, 1016
BspQI GCTCTTC 1 cut(s) 1086
BsrDI GCAATG 1 cut(s) 744
BsrI ACTGG 3 cut(s) 191, 605, 1106
BssECI CCNNGG 8 cut(s) 432, 761, 870, 1065, 1197, 1198, 1310, 1319
BssMI GATC 8 cut(s) 102, 172, 310, 490, 765, 980, 1021, 1440
BssT1I CCWWGG 4 cut(s) 432, 761, 1310, 1319
Bst2UI CCWGG 4 cut(s) 249, 405, 1199, 1257
Bst4CI ACNGT 5 cut(s) 307, 333, 464, 963, 1384
Bst6I CTCTTC 1 cut(s) 1086
BstC8I GCNNGC 4 cut(s) 295, 1111, 1396, 1428
BstDEI CTNAG 2 cut(s) 263, 994
BstDSI CCRYGG 3 cut(s) 432, 1310, 1319
BstENI CCTNNNNNAGG 1 cut(s) 1064
BstF5I GGATG 3 cut(s) 413, 1122, 1180
BstKTI GATC 8 cut(s) 105, 175, 313, 493, 768, 983, 1024, 1443
BstMAI GTCTC 3 cut(s) 924, 997, 1230
BstMBI GATC 8 cut(s) 102, 172, 310, 490, 765, 980, 1021, 1440
BstMWI GCNNNNNNNGC 2 cut(s) 1315, 1481
BstNI CCWGG 4 cut(s) 249, 405, 1199, 1257
BstNSI RCATGY 1 cut(s) 24
BstSCI CCNGG 4 cut(s) 247, 403, 1197, 1255
BstSFI CTRYAG 3 cut(s) 315, 1228, 1360
BstV1I GCAGC 2 cut(s) 1088, 1169
BstX2I RGATCY 4 cut(s) 172, 310, 765, 980
BstYI RGATCY 4 cut(s) 172, 310, 765, 980
BsuRI GGCC 3 cut(s) 1129, 1318, 1398
BtgI CCRYGG 3 cut(s) 432, 1310, 1319
BtrI CACGTC 2 cut(s) 891, 1263
BtsCI GGATG 3 cut(s) 413, 1122, 1180
BtsI GCAGTG 1 cut(s) 1237
BtsIMutI CAGTG 5 cut(s) 312, 329, 469, 968, 1237
Cac8I GCNNGC 4 cut(s) 295, 1111, 1396, 1428
CaiI CAGNNNCTG 1 cut(s) 1198
Cfr13I GGNCC 4 cut(s) 203, 401, 446, 1128
CseI GACGC 1 cut(s) 1471
Csp6I GTAC 1 cut(s) 583
CviQI GTAC 1 cut(s) 583
DdeI CTNAG 2 cut(s) 263, 994
DpnI GATC 8 cut(s) 104, 174, 312, 492, 767, 982, 1023, 1442
DpnII GATC 8 cut(s) 102, 172, 310, 490, 765, 980, 1021, 1440
DraIII CACNNNGTG 1 cut(s) 791
EaeI YGGCCR 2 cut(s) 1316, 1396
Eam1104I CTCTTC 1 cut(s) 1086
EarI CTCTTC 1 cut(s) 1086
Eco130I CCWWGG 4 cut(s) 432, 761, 1310, 1319
Eco47I GGWCC 3 cut(s) 203, 401, 446
Eco88I CYCGRG 1 cut(s) 871
EcoNI CCTNNNNNAGG 1 cut(s) 1064
EcoO109I RGGNCCY 1 cut(s) 446
EcoRII CCWGG 4 cut(s) 247, 403, 1197, 1255
EcoT14I CCWWGG 4 cut(s) 432, 761, 1310, 1319
ErhI CCWWGG 4 cut(s) 432, 761, 1310, 1319
FalI AAGNNNNNCTT 2 cut(s) 1065, 1097
FaqI GGGAC 3 cut(s) 252, 459, 1474
FauI CCCGC 1 cut(s) 1358
FauNDI CATATG 1 cut(s) 1401
FbaI TGATCA 1 cut(s) 102
Fnu4HI GCNGC 3 cut(s) 1077, 1158, 1316
FokI GGATG 3 cut(s) 420, 1129, 1187
Fsp4HI GCNGC 3 cut(s) 1077, 1158, 1316
FspBI CTAG 4 cut(s) 380, 605, 788, 1269
GluI GCNGC 3 cut(s) 1077, 1158, 1316
GsaI CCCAGC 2 cut(s) 1413, 1484
GsuI CTGGAG 1 cut(s) 174
HaeIII GGCC 3 cut(s) 1129, 1318, 1398
HapII CCGG 1 cut(s) 843
HgaI GACGC 1 cut(s) 1471
HincII GTYRAC 2 cut(s) 460, 1371
HindII GTYRAC 2 cut(s) 460, 1371
HinfI GANTC 4 cut(s) 350, 578, 757, 1203
HpaI GTTAAC 2 cut(s) 460, 1371
HpaII CCGG 1 cut(s) 843
HphI GGTGA 4 cut(s) 345, 569, 1081, 1426
Hpy166II GTNNAC 6 cut(s) 18, 460, 585, 598, 810, 1371
Hpy188I TCNGA 8 cut(s) 13, 163, 455, 541, 829, 997, 1033, 1208
Hpy188III TCNNGA 5 cut(s) 176, 269, 484, 978, 1269
Hpy8I GTNNAC 6 cut(s) 18, 460, 585, 598, 810, 1371
Hpy99I CGWCG 1 cut(s) 923
HpyAV CCTTC 5 cut(s) 160, 214, 1014, 1478, 1486
HpyCH4III ACNGT 5 cut(s) 307, 333, 464, 963, 1384
HpyCH4IV ACGT 3 cut(s) 552, 890, 1262
HpyCH4V TGCA 6 cut(s) 69, 293, 966, 1113, 1230, 1247
HpyF10VI GCNNNNNNNGC 2 cut(s) 1315, 1481
HpyF3I CTNAG 2 cut(s) 263, 994
HpySE526I ACGT 3 cut(s) 552, 890, 1262
Ksp22I TGATCA 1 cut(s) 102
KspAI GTTAAC 2 cut(s) 460, 1371
Kzo9I GATC 8 cut(s) 102, 172, 310, 490, 765, 980, 1021, 1440
LguI GCTCTTC 1 cut(s) 1086
LmnI GCTCC 7 cut(s) 33, 428, 961, 1006, 1228, 1391, 1470
Lsp1109I GCAGC 2 cut(s) 1088, 1169
LweI GCATC 2 cut(s) 229, 1234
MaeI CTAG 4 cut(s) 380, 605, 788, 1269
MaeII ACGT 3 cut(s) 552, 890, 1262
MaeIII GTNAC 4 cut(s) 301, 351, 557, 860
MalI GATC 8 cut(s) 104, 174, 312, 492, 767, 982, 1023, 1442
MboI GATC 8 cut(s) 102, 172, 310, 490, 765, 980, 1021, 1440
MboII GAAGA 7 cut(s) 177, 284, 357, 449, 631, 1073, 1445
MfeI CAATTG 1 cut(s) 47
MflI RGATCY 4 cut(s) 172, 310, 765, 980
MhlI GDGCHC 2 cut(s) 331, 1432
MlsI TGGCCA 1 cut(s) 1398
MluCI AATT 8 cut(s) 47, 81, 179, 278, 361, 440, 645, 1209
MluNI TGGCCA 1 cut(s) 1398
MlyI GAGTC 2 cut(s) 359, 572
MmeI TCCRAC 2 cut(s) 181, 1321
Mox20I TGGCCA 1 cut(s) 1398
MscI TGGCCA 1 cut(s) 1398
MseI TTAA 6 cut(s) 282, 392, 459, 1011, 1089, 1370
Msp20I TGGCCA 1 cut(s) 1398
MspA1I CMGCKG 1 cut(s) 1365
MspI CCGG 1 cut(s) 843
MspR9I CCNGG 4 cut(s) 249, 405, 1199, 1257
MunI CAATTG 1 cut(s) 47
Mva1269I GAATGC 1 cut(s) 1225
MvaI CCWGG 4 cut(s) 249, 405, 1199, 1257
MwoI GCNNNNNNNGC 2 cut(s) 1315, 1481
NcoI CCATGG 3 cut(s) 432, 1310, 1319
NdeI CATATG 1 cut(s) 1401
NdeII GATC 8 cut(s) 102, 172, 310, 490, 765, 980, 1021, 1440
NlaIV GGNNCC 7 cut(s) 205, 312, 430, 447, 767, 982, 1407
NmeAIII GCCGAG 1 cut(s) 1090
NmuCI GTSAC 3 cut(s) 351, 557, 860
NspI RCATGY 1 cut(s) 24
PasI CCCWGGG 1 cut(s) 1198
PciI ACATGT 1 cut(s) 20
PciSI GCTCTTC 1 cut(s) 1086
PctI GAATGC 1 cut(s) 1225
PfeI GAWTC 2 cut(s) 757, 1203
PflMI CCANNNNNTGG 1 cut(s) 1101
PkrI GCNGC 3 cut(s) 1078, 1159, 1317
PleI GAGTC 2 cut(s) 358, 572
PpsI GAGTC 2 cut(s) 358, 572
PpuMI RGGWCCY 1 cut(s) 446
PscI ACATGT 1 cut(s) 20
Psp1406I AACGTT 1 cut(s) 552
Psp5II RGGWCCY 1 cut(s) 446
Psp6I CCWGG 4 cut(s) 247, 403, 1197, 1255
PspFI CCCAGC 2 cut(s) 1409, 1480
PspGI CCWGG 4 cut(s) 247, 403, 1197, 1255
PspN4I GGNNCC 7 cut(s) 205, 312, 430, 447, 767, 982, 1407
PspPI GGNCC 4 cut(s) 203, 401, 446, 1128
PspPPI RGGWCCY 1 cut(s) 446
PstI CTGCAG 1 cut(s) 1232
PstNI CAGNNNCTG 1 cut(s) 1198
PsuI RGATCY 4 cut(s) 172, 310, 765, 980
RsaI GTAC 1 cut(s) 584
RsaNI GTAC 1 cut(s) 583
SapI GCTCTTC 1 cut(s) 1086
SaqAI TTAA 6 cut(s) 282, 392, 459, 1011, 1089, 1370
SatI GCNGC 3 cut(s) 1077, 1158, 1316
Sau3AI GATC 8 cut(s) 102, 172, 310, 490, 765, 980, 1021, 1440
Sau96I GGNCC 4 cut(s) 203, 401, 446, 1128
SchI GAGTC 2 cut(s) 359, 572
ScrFI CCNGG 4 cut(s) 249, 405, 1199, 1257
SduI GDGCHC 2 cut(s) 331, 1432
SfaNI GCATC 2 cut(s) 229, 1234
SfcI CTRYAG 3 cut(s) 315, 1228, 1360
SinI GGWCC 3 cut(s) 203, 401, 446
SmlI CTYRAG 1 cut(s) 1289
SmoI CTYRAG 1 cut(s) 1289
Sse9I AATT 8 cut(s) 47, 81, 179, 278, 361, 440, 645, 1209
SsiI CCGC 2 cut(s) 1315, 1365
SspI AATATT 1 cut(s) 857
SspMI CTAG 4 cut(s) 380, 605, 788, 1269
StyD4I CCNGG 4 cut(s) 247, 403, 1197, 1255
StyI CCWWGG 4 cut(s) 432, 761, 1310, 1319
TaaI ACNGT 5 cut(s) 307, 333, 464, 963, 1384
TaiI ACGT 3 cut(s) 555, 893, 1265
TaqI TCGA 1 cut(s) 177
TasI AATT 8 cut(s) 47, 81, 179, 278, 361, 440, 645, 1209
TauI GCSGC 1 cut(s) 1318
TfiI GAWTC 2 cut(s) 757, 1203
Tru1I TTAA 6 cut(s) 282, 392, 459, 1011, 1089, 1370
Tru9I TTAA 6 cut(s) 282, 392, 459, 1011, 1089, 1370
TscAI CASTG 5 cut(s) 312, 336, 469, 968, 1237
TseFI GTSAC 3 cut(s) 351, 557, 860
TseI GCWGC 2 cut(s) 1076, 1157
Tsp45I GTSAC 3 cut(s) 351, 557, 860
TspDTI ATGAA 4 cut(s) 17, 631, 920, 1073
TspRI CASTG 5 cut(s) 312, 336, 469, 968, 1237
Van91I CCANNNNNTGG 1 cut(s) 1101
VpaK11BI GGWCC 3 cut(s) 203, 401, 446
XagI CCTNNNNNAGG 1 cut(s) 1064
XapI RAATTY 3 cut(s) 179, 278, 361
XbaI TCTAGA 1 cut(s) 1268
XceI RCATGY 1 cut(s) 24
XcmI CCANNNNNNNNNTGG 2 cut(s) 439, 1317
XspI CTAG 4 cut(s) 380, 605, 788, 1269
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.