Rorug06G0356600

Belongs to the peptidase S10 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000915
Physical Location & Seq
Reverse (-)
50404901 .. 50410580
5680 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0356600.1

Sequence Viewer

Length: 2439 bp
ATGGCGAATCGCGCTAAGCTGACTCGAATACCGAGCATGAGAGATCGCGTGGAGGACACTCTCTACGCTCACCGCAACGAAATCGTTGCGCTTCTCTCCAGGTATGTGGCTCAAGGAAAAGGGATACTGCAACCACATGACCTGATCGATGAGCTCGAGAAAGTGATCACTGATGACAAAGCGAGGCTGAAGCTCAGCGAAGGTCCTTTTAGTGAAGTCCTCAAGTCGGCACAGGAAGCCATTGTATATCCTCCATTTGTGGCTCTAGCAGTTCGTCCAAGGCCAGGTGTATGGGAATTTGTTCGTGTTAATGTAAATGAGCTGACTGTGGAACAATTGAGTGTTTCTGAATATCTTGGCTTTAAAGAAGAACTTGTGGATGGGAGGTCTAATGGCAGATATGTACTTGAGCTCGATTTTGAGCCATTCAACGCTAATTTTCCTCGTCCCACCCGGTCATCATCCATTGGGAATGGCGTTCAATTCCTCAACCGCCACCTTTCTTCAATTATGTTCCGTAACAAAGACTGTTTGGAGCCATTACTGGATTTCCTTAGAGCACACACATATAAAGGGCATGCACTGATGTTGAATGATCGGATACAGAGCATATCCAAGCTTCAGGCAGCTTTGGTTAAGGCCGAGGATAATCTTTCTAAACTTCCATCTGAGACACCCTATTCTGAGTTTGATTATGTATTACAAGGATTGGGTTTTGAGCGAGGTTGGGGAGACACTGCAGAACACGTATTGGAGATGATGCATCTTCTCCTAGATATCCTACAGGCTCCTGATCCTACTACCTTGGAGACATTTCTAGGGAGAGTACCAATGGTTTTTAATGTTGTCATTTTGTCTCCACATGGATACTTTGGGCAAGCAAATGTCTTAGGCTTACCCGACACTGGTGGGCAGGTTGTCTATATACTGGACCAAGTGCGTGCCCTCGAGAATGAAATGCTTCAAAGAATTAAGAGGCAAGGATTAAACTTCGCTCCAAGAATTCTTATTGTAACCAGGCTAATACCTGATGCCAAGGGAACTACATGCAACCAGCGGCTAGAAAGAGTCACTGGAACAGAGCACAGCCATATTTTGCGAGTTCCTTTCAGATCAGAGAATGGTATTCTTCGTAAATGGATATCAAGGTTTGATGTATGGCCTTATTTGGAGACCTTTGCTGAGGATGTTGGAAGTGAAATTACTGCTGAGTTACAGGGATATCCAGATTTTATTATTGGAAATTACAGTGATGGAAATCTTGTTGCCTCTTTGTTGGCTTATAAAATGGGGGTTACACAGTGCACCATCGCGCATGCTTTGGAGAAAACAAAATATCCGGATTCAGATATCTACTGGAAAAAATACGATGAGAAATATCACTTCTCATGTCAATTCACAGCTGACCTTATAGCCATGAACAGTGCAGATTTTATAATCACCAGCACATACCAAGAGATTGCTGGAACGAAGAATACTGTTGGACAGTATGAGAGCCATAACTCTTTCACTCTTCCAGGGCTGTACCGTGTTGTTCATGGCATTGATGTTTTTGATCCAAAGTTCAATATTGTGTCTCCTGGAGCTGATATGAGCATTTATTTCCCTTACTTTGAAAAGGAAAAGAGACTTACATCCCTCCATGGTTCCATTGAGAAGTTGCTTTATGATCCTGAGCAGAATGATGAGCACATTGGTCTTCTGAAGGATCCATCAAAGCCCATCTTATTTTCCATGGCAAGGATGGACAAGGTGAAAAACTTGACCGGTTTGGTTGAGTCCTATGGTAAGAATGCCAAACTAAGGGAACTAGTAAACCTTGTCTTGGTGGCTGGTTACAATGATGTGAAGAAGTCAAATGATAGAGAAGAGATTGCTGAGATTGAAAAGATGCATGCTCTCGTTAAGGAGTACAACTTGAATGGTCAATTTCGATGGATATCTTCCCAAACTAACCGAGCACGTAATGGTGAGCTATATCGTTACGTTGCAGATACTGGAGGTGCTTTTGTTCAGCCTGCACTTTATGAAGCTTTTGGACTCACAGTTGTGGAGGCCTTGAATTGTGGCCTTCCGACATTTGCCACAATCCATGGTGGTCCTGCGGAGATCATTGAGCACGGTATATCTGGATTTCATATCGACCCTTATCACTCTGAACAGATGGCTGCAATTATGGCTGATTTCTTTCAACGTAGTAAGGAGGATCCTAGCTACTGGAAGAAAATTGCAGATGGGGGCCTGAAAAGAATTTTTGAAAGGTACACATGGAACATTTATTCTGAAAGGCTAATGACATTGGCCGGTGTTTACGGTTTCTGGAAGTATGTGTCAAAGCTTGATAGGCTTGAGACCAAGCGATATCTCGAGATGTTCTACATTCTGAAGTTCCGCGATTTGGTTAAAACTGTTCCTGAGGCAAGAGATGATCCACATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Peptidase_S10

Protein Analysis

812

Amino Acids

92.59

Weight (kDa)

5.99

Isoelectric Point (pI)

36.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SUS_N PF24861 10 - 123 5.2e-49 Sucrose synthase N-terminal
SUS_EPBD PF24862 158 - 245 3.6e-33 Sucrose synthase EPBD domain
GT-B_Sucrose_synth PF00862 268 - 556 8.9e-170 Sucrose synthase first GT-B domain
Glycos_transf_1 PF00534 564 - 742 2.4e-25 Glycosyl transferases group 1
Glyco_trans_1_4 PF13692 574 - 728 2.2e-11 Glycosyl transferases group 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1284, 1436
Acc36I ACCTGC 1 cut(s) 904
AccII CGCG 4 cut(s) 12, 48, 1313, 2394
AccIII TCCGGA 1 cut(s) 1339
AciI CCGC 5 cut(s) 73, 493, 1057, 2105, 2392
AclWI GGATC 8 cut(s) 788, 1550, 1664, 1703, 1716, 2201, 2214, 2423
AcoI YGGCCR 1 cut(s) 2301
AcsI RAATTY 3 cut(s) 296, 1002, 2250
AcuI CTGAAG 4 cut(s) 209, 605, 1724, 2405
AfaI GTAC 5 cut(s) 405, 828, 1526, 1913, 2264
AfiI CCNNNNNNNGG 7 cut(s) 226, 284, 905, 1740, 1803, 1825, 2398
AflIII ACRYGT 1 cut(s) 745
AgeI ACCGGT 1 cut(s) 1766
AhlI ACTAGT 1 cut(s) 1810
AjnI CCWGG 5 cut(s) 98, 283, 1016, 1516, 1579
AleI CACNNNNGTG 1 cut(s) 2048
Alw21I GWGCWC 8 cut(s) 156, 414, 562, 1086, 1307, 1692, 1963, 2121
Alw26I GTCTC 8 cut(s) 665, 726, 803, 861, 1166, 1581, 1621, 2345
Alw44I GTGCAC 1 cut(s) 1303
AlwI GGATC 8 cut(s) 788, 1550, 1664, 1703, 1716, 2201, 2214, 2423
AlwNI CAGNNNCTG 1 cut(s) 1997
Ama87I CYCGRG 3 cut(s) 155, 947, 2366
Aor13HI TCCGGA 1 cut(s) 1339
AoxI GGCC 7 cut(s) 281, 639, 1160, 2055, 2068, 2239, 2301
ApaLI GTGCAC 1 cut(s) 1303
ApeKI GCWGC 2 cut(s) 626, 2168
ApoI RAATTY 3 cut(s) 296, 1002, 2250
AsiGI ACCGGT 1 cut(s) 1766
Asp700I GAANNNNTTC 2 cut(s) 300, 960
AspLEI GCGC 3 cut(s) 14, 91, 1315
AspS9I GGNCC 4 cut(s) 203, 931, 2099, 2239
AsuC2I CCSGG 1 cut(s) 454
AsuHPI GGTGA 4 cut(s) 62, 1432, 1765, 1982
AvaI CYCGRG 3 cut(s) 155, 947, 2366
AvaII GGWCC 3 cut(s) 203, 931, 2099
AxyI CCTNAGG 1 cut(s) 2415
BaeGI GKGCMC 2 cut(s) 946, 1307
BamHI GGATCC 2 cut(s) 1708, 2206
BanII GRGCYC 2 cut(s) 156, 414
BarI GAAGNNNNNNTAC 2 cut(s) 1186, 1218
BbsI GAAGAC 1 cut(s) 1691
Bbv12I GWGCWC 8 cut(s) 156, 414, 562, 1086, 1307, 1692, 1963, 2121
BbvCI CCTCAGC 1 cut(s) 1182
BbvI GCAGC 2 cut(s) 638, 2155
BcgI CGANNNNNNTGC 4 cut(s) 64, 68, 98, 102
BciT130I CCWGG 5 cut(s) 100, 285, 1018, 1518, 1581
BciVI GTATCC 3 cut(s) 117, 594, 860
BclI TGATCA 1 cut(s) 165
BcnI CCSGG 1 cut(s) 454
BcoDI GTCTC 8 cut(s) 665, 726, 803, 861, 1166, 1581, 1621, 2345
BcuI ACTAGT 1 cut(s) 1810
BfaI CTAG 6 cut(s) 266, 773, 818, 1061, 1811, 2211
BfmI CTRYAG 2 cut(s) 738, 782
BfuAI ACCTGC 1 cut(s) 904
BfuI GTATCC 3 cut(s) 117, 594, 860
BisI GCNGC 3 cut(s) 627, 1058, 2169
BlpI GCTNAGC 2 cut(s) 15, 194
BlsI GCNGC 3 cut(s) 628, 1059, 2170
Bme1390I CCNGG 6 cut(s) 100, 285, 454, 1018, 1518, 1581
Bme18I GGWCC 3 cut(s) 203, 931, 2099
BmeT110I CYCGRG 3 cut(s) 155, 947, 2366
BmgT120I GGNCC 4 cut(s) 203, 931, 2099, 2239
BmiI GGNNCC 6 cut(s) 537, 789, 1648, 1710, 2208, 2240
BmrFI CCNGG 6 cut(s) 100, 285, 454, 1018, 1518, 1581
BmsI GCATC 4 cut(s) 750, 772, 1021, 1881
BpiI GAAGAC 1 cut(s) 1691
BpmI CTGGAG 3 cut(s) 82, 1602, 2019
Bpu10I CCTNAGC 2 cut(s) 1182, 1674
Bpu1102I GCTNAGC 2 cut(s) 15, 194
BpuEI CTTGAG 4 cut(s) 96, 206, 428, 2369
BpuMI CCSGG 1 cut(s) 454
Bsa29I ATCGAT 1 cut(s) 147
BsaAI YACGTR 2 cut(s) 748, 1964
BsaBI GATNNNNATC 2 cut(s) 1257, 1939
BsaI GGTCTC 2 cut(s) 1166, 2345
BsaJI CCNNGG 8 cut(s) 278, 642, 804, 1035, 1517, 1642, 1734, 2092
BsaWI WCCGGW 2 cut(s) 1339, 1766
Bsc4I CCNNNNNNNGG 7 cut(s) 226, 284, 905, 1740, 1803, 1825, 2398
Bse118I RCCGGY 2 cut(s) 1766, 2303
Bse1I ACTGG 7 cut(s) 549, 910, 933, 1078, 1361, 2002, 2222
Bse21I CCTNAGG 1 cut(s) 2415
Bse8I GATNNNNATC 2 cut(s) 1257, 1939
BseAI TCCGGA 1 cut(s) 1339
BseBI CCWGG 5 cut(s) 100, 285, 1018, 1518, 1581
BseCI ATCGAT 1 cut(s) 147
BseDI CCNNGG 8 cut(s) 278, 642, 804, 1035, 1517, 1642, 1734, 2092
BseGI GGATG 5 cut(s) 385, 461, 1192, 1634, 1749
BseJI GATNNNNATC 2 cut(s) 1257, 1939
BseLI CCNNNNNNNGG 7 cut(s) 226, 284, 905, 1740, 1803, 1825, 2398
BseMII CTCAG 8 cut(s) 208, 660, 675, 1173, 1200, 1665, 1869, 2406
BseNI ACTGG 7 cut(s) 549, 910, 933, 1078, 1361, 2002, 2222
BseSI GKGCMC 2 cut(s) 946, 1307
BseXI GCAGC 2 cut(s) 638, 2155
BsgI GTGCAG 2 cut(s) 1446, 2004
Bsh1236I CGCG 4 cut(s) 12, 48, 1313, 2394
BshFI GGCC 7 cut(s) 283, 641, 1162, 2057, 2070, 2241, 2303
BshTI ACCGGT 1 cut(s) 1766
BshVI ATCGAT 1 cut(s) 147
BsiHKAI GWGCWC 8 cut(s) 156, 414, 562, 1086, 1307, 1692, 1963, 2121
BsiHKCI CYCGRG 3 cut(s) 155, 947, 2366
BsiSI CCGG 4 cut(s) 454, 1340, 1767, 2304
BslFI GGGAC 1 cut(s) 432
BslI CCNNNNNNNGG 7 cut(s) 226, 284, 905, 1740, 1803, 1825, 2398
BsmAI GTCTC 8 cut(s) 665, 726, 803, 861, 1166, 1581, 1621, 2345
BsmFI GGGAC 1 cut(s) 432
BsmI GAATGC 1 cut(s) 1798
BsnI GGCC 7 cut(s) 283, 641, 1162, 2057, 2070, 2241, 2303
Bso31I GGTCTC 2 cut(s) 1166, 2345
BsoBI CYCGRG 3 cut(s) 155, 947, 2366
Bsp1286I GDGCHC 9 cut(s) 156, 414, 562, 946, 1086, 1307, 1692, 1963, 2121
Bsp13I TCCGGA 1 cut(s) 1339
Bsp1720I GCTNAGC 2 cut(s) 15, 194
Bsp19I CCATGG 3 cut(s) 1642, 1734, 2092
BspACI CCGC 5 cut(s) 73, 493, 1057, 2105, 2392
BspANI GGCC 7 cut(s) 283, 641, 1162, 2057, 2070, 2241, 2303
BspCNI CTCAG 8 cut(s) 207, 661, 676, 1174, 1201, 1666, 1870, 2407
BspDI ATCGAT 1 cut(s) 147
BspEI TCCGGA 1 cut(s) 1339
BspFNI CGCG 4 cut(s) 12, 48, 1313, 2394
BspLI GGNNCC 6 cut(s) 537, 789, 1648, 1710, 2208, 2240
BspMAI CTGCAG 1 cut(s) 742
BspMI ACCTGC 1 cut(s) 904
BspPI GGATC 8 cut(s) 788, 1550, 1664, 1703, 1716, 2201, 2214, 2423
BspTNI GGTCTC 2 cut(s) 1166, 2345
BsrFI RCCGGY 2 cut(s) 1766, 2303
BsrI ACTGG 7 cut(s) 549, 910, 933, 1078, 1361, 2002, 2222
BssAI RCCGGY 2 cut(s) 1766, 2303
BssECI CCNNGG 8 cut(s) 278, 642, 804, 1035, 1517, 1642, 1734, 2092
BssT1I CCWWGG 6 cut(s) 278, 804, 1035, 1642, 1734, 2092
Bst2UI CCWGG 5 cut(s) 100, 285, 1018, 1518, 1581
Bst6I CTCTTC 2 cut(s) 1518, 1863
BstBAI YACGTR 2 cut(s) 748, 1964
BstC8I GCNNGC 6 cut(s) 579, 879, 942, 1317, 1896, 2019
BstDSI CCRYGG 3 cut(s) 1642, 1734, 2092
BstF5I GGATG 5 cut(s) 385, 461, 1192, 1634, 1749
BstFNI CGCG 4 cut(s) 12, 48, 1313, 2394
BstHHI GCGC 3 cut(s) 14, 91, 1315
BstMAI GTCTC 8 cut(s) 665, 726, 803, 861, 1166, 1581, 1621, 2345
BstMWI GCNNNNNNNGC 4 cut(s) 11, 236, 2177, 2344
BstNI CCWGG 5 cut(s) 100, 285, 1018, 1518, 1581
BstNSI RCATGY 4 cut(s) 581, 1050, 1319, 1898
BstSCI CCNGG 6 cut(s) 98, 283, 452, 1016, 1516, 1579
BstSFI CTRYAG 2 cut(s) 738, 782
BstSLI GKGCMC 2 cut(s) 946, 1307
BstUI CGCG 4 cut(s) 12, 48, 1313, 2394
BstV1I GCAGC 2 cut(s) 638, 2155
BstV2I GAAGAC 1 cut(s) 1691
BstX2I RGATCY 2 cut(s) 1708, 2206
BstXI CCANNNNNNTGG 2 cut(s) 106, 291
BstYI RGATCY 2 cut(s) 1708, 2206
Bsu15I ATCGAT 1 cut(s) 147
Bsu36I CCTNAGG 1 cut(s) 2415
BsuI GTATCC 3 cut(s) 117, 594, 860
BsuRI GGCC 7 cut(s) 283, 641, 1162, 2057, 2070, 2241, 2303
BsuTUI ATCGAT 1 cut(s) 147
BtgI CCRYGG 3 cut(s) 1642, 1734, 2092
BtgZI GCGATG 1 cut(s) 1294
BtsCI GGATG 5 cut(s) 385, 461, 1192, 1634, 1749
BtsI GCAGTG 1 cut(s) 735
BtsIMutI CAGTG 8 cut(s) 168, 581, 735, 903, 1071, 1255, 1307, 1429
BveI ACCTGC 1 cut(s) 904
Cac8I GCNNGC 6 cut(s) 579, 879, 942, 1317, 1896, 2019
CaiI CAGNNNCTG 1 cut(s) 1997
CfoI GCGC 3 cut(s) 14, 91, 1315
Cfr10I RCCGGY 2 cut(s) 1766, 2303
Cfr13I GGNCC 4 cut(s) 203, 931, 2099, 2239
ClaI ATCGAT 1 cut(s) 147
Csp6I GTAC 5 cut(s) 404, 827, 1525, 1912, 2263
CspAI ACCGGT 1 cut(s) 1766
CviQI GTAC 5 cut(s) 404, 827, 1525, 1912, 2263
DraI TTTAAA 1 cut(s) 364
EaeI YGGCCR 1 cut(s) 2301
Eam1104I CTCTTC 2 cut(s) 1518, 1863
EarI CTCTTC 2 cut(s) 1518, 1863
Ecl136II GAGCTC 2 cut(s) 154, 412
Eco130I CCWWGG 6 cut(s) 278, 804, 1035, 1642, 1734, 2092
Eco147I AGGCCT 1 cut(s) 2057
Eco24I GRGCYC 2 cut(s) 156, 414
Eco31I GGTCTC 2 cut(s) 1166, 2345
Eco32I GATATC 6 cut(s) 778, 1143, 1223, 1351, 1941, 2363
Eco47I GGWCC 3 cut(s) 203, 931, 2099
Eco53kI GAGCTC 2 cut(s) 154, 412
Eco57I CTGAAG 4 cut(s) 209, 605, 1724, 2405
Eco81I CCTNAGG 1 cut(s) 2415
Eco88I CYCGRG 3 cut(s) 155, 947, 2366
EcoICRI GAGCTC 2 cut(s) 154, 412
EcoO109I RGGNCCY 2 cut(s) 203, 2239
EcoRI GAATTC 1 cut(s) 1002
EcoRII CCWGG 5 cut(s) 98, 283, 1016, 1516, 1579
EcoRV GATATC 6 cut(s) 778, 1143, 1223, 1351, 1941, 2363
EcoT14I CCWWGG 6 cut(s) 278, 804, 1035, 1642, 1734, 2092
EcoT22I ATGCAT 2 cut(s) 765, 1896
EcoT38I GRGCYC 2 cut(s) 156, 414
ErhI CCWWGG 6 cut(s) 278, 804, 1035, 1642, 1734, 2092
FalI AAGNNNNNCTT 4 cut(s) 357, 389, 1709, 1741
FaqI GGGAC 1 cut(s) 432
FbaI TGATCA 1 cut(s) 165
Fnu4HI GCNGC 3 cut(s) 627, 1058, 2169
FokI GGATG 5 cut(s) 392, 448, 1199, 1621, 1756
FriOI GRGCYC 2 cut(s) 156, 414
Fsp4HI GCNGC 3 cut(s) 627, 1058, 2169
FspBI CTAG 6 cut(s) 266, 773, 818, 1061, 1811, 2211
GlaI GCGC 3 cut(s) 13, 90, 1314
GluI GCNGC 3 cut(s) 627, 1058, 2169
GsuI CTGGAG 3 cut(s) 82, 1602, 2019
HaeIII GGCC 7 cut(s) 283, 641, 1162, 2057, 2070, 2241, 2303
HapII CCGG 4 cut(s) 454, 1340, 1767, 2304
HhaI GCGC 3 cut(s) 14, 91, 1315
Hin6I GCGC 3 cut(s) 12, 89, 1313
HinP1I GCGC 3 cut(s) 12, 89, 1313
HindIII AAGCTT 3 cut(s) 617, 2031, 2336
HinfI GANTC 6 cut(s) 7, 22, 1068, 1343, 1778, 2040
HpaII CCGG 4 cut(s) 454, 1340, 1767, 2304
HphI GGTGA 4 cut(s) 62, 1432, 1765, 1982
Hpy166II GTNNAC 4 cut(s) 1305, 1816, 2265, 2311
Hpy8I GTNNAC 4 cut(s) 1305, 1816, 2265, 2311
HpyAV CCTTC 3 cut(s) 194, 1699, 2081
HpyCH4IV ACGT 4 cut(s) 747, 1963, 1986, 2194
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 236, 2177, 2344
HpySE526I ACGT 4 cut(s) 747, 1963, 1986, 2194
HspAI GCGC 3 cut(s) 12, 89, 1313
Kpn2I TCCGGA 1 cut(s) 1339
Ksp22I TGATCA 1 cut(s) 165
LmnI GCTCC 4 cut(s) 535, 793, 1000, 1583
Lsp1109I GCAGC 2 cut(s) 638, 2155
LweI GCATC 4 cut(s) 750, 772, 1021, 1881
MaeI CTAG 6 cut(s) 266, 773, 818, 1061, 1811, 2211
MaeII ACGT 4 cut(s) 747, 1963, 1986, 2194
MaeIII GTNAC 7 cut(s) 518, 1012, 1069, 1212, 1294, 1835, 1982
MfeI CAATTG 1 cut(s) 335
MflI RGATCY 2 cut(s) 1708, 2206
MhlI GDGCHC 9 cut(s) 156, 414, 562, 946, 1086, 1307, 1692, 1963, 2121
MlyI GAGTC 4 cut(s) 16, 1077, 1787, 2034
MmeI TCCRAC 3 cut(s) 1171, 1462, 2099
Mph1103I ATGCAT 2 cut(s) 765, 1896
MroI TCCGGA 1 cut(s) 1339
MroXI GAANNNNTTC 2 cut(s) 300, 960
MseI TTAA 9 cut(s) 309, 363, 636, 840, 972, 986, 1905, 2403, 2437
MslI CAYNNNNRTG 1 cut(s) 2048
MspA1I CMGCKG 2 cut(s) 1057, 1403
MspI CCGG 4 cut(s) 454, 1340, 1767, 2304
MspR9I CCNGG 6 cut(s) 100, 285, 454, 1018, 1518, 1581
MunI CAATTG 1 cut(s) 335
Mva1269I GAATGC 1 cut(s) 1798
MvaI CCWGG 5 cut(s) 100, 285, 1018, 1518, 1581
MvnI CGCG 4 cut(s) 12, 48, 1313, 2394
MwoI GCNNNNNNNGC 4 cut(s) 11, 236, 2177, 2344
NciI CCSGG 1 cut(s) 454
NcoI CCATGG 3 cut(s) 1642, 1734, 2092
NlaIV GGNNCC 6 cut(s) 537, 789, 1648, 1710, 2208, 2240
NmeAIII GCCGAG 1 cut(s) 667
NmuCI GTSAC 1 cut(s) 1069
NsiI ATGCAT 2 cut(s) 765, 1896
NspI RCATGY 4 cut(s) 581, 1050, 1319, 1898
OliI CACNNNNGTG 1 cut(s) 2048
PaeI GCATGC 3 cut(s) 581, 1319, 1898
PaeR7I CTCGAG 3 cut(s) 155, 947, 2366
PceI AGGCCT 1 cut(s) 2057
PcsI WCGNNNNNNNCGW 1 cut(s) 153
PctI GAATGC 1 cut(s) 1798
PdmI GAANNNNTTC 2 cut(s) 300, 960
PfeI GAWTC 2 cut(s) 7, 1343
PfoI TCCNGGA 1 cut(s) 1579
PinAI ACCGGT 1 cut(s) 1766
PkrI GCNGC 3 cut(s) 628, 1059, 2170
PleI GAGTC 4 cut(s) 16, 1076, 1786, 2034
PpsI GAGTC 4 cut(s) 16, 1076, 1786, 2034
Ppu21I YACGTR 2 cut(s) 748, 1964
PpuMI RGGWCCY 1 cut(s) 203
PsiI TTATAA 2 cut(s) 1284, 1436
Psp124BI GAGCTC 2 cut(s) 156, 414
Psp5II RGGWCCY 1 cut(s) 203
Psp6I CCWGG 5 cut(s) 98, 283, 1016, 1516, 1579
PspGI CCWGG 5 cut(s) 98, 283, 1016, 1516, 1579
PspN4I GGNNCC 6 cut(s) 537, 789, 1648, 1710, 2208, 2240
PspPI GGNCC 4 cut(s) 203, 931, 2099, 2239
PspPPI RGGWCCY 1 cut(s) 203
PsrI GAACNNNNNNTAC 2 cut(s) 1459, 1491
PstI CTGCAG 1 cut(s) 742
PstNI CAGNNNCTG 1 cut(s) 1997
PsuI RGATCY 2 cut(s) 1708, 2206
PvuII CAGCTG 1 cut(s) 1403
RsaI GTAC 5 cut(s) 405, 828, 1526, 1913, 2264
RsaNI GTAC 5 cut(s) 404, 827, 1525, 1912, 2263
RseI CAYNNNNRTG 1 cut(s) 2048
SacI GAGCTC 2 cut(s) 156, 414
SaqAI TTAA 9 cut(s) 309, 363, 636, 840, 972, 986, 1905, 2403, 2437
SatI GCNGC 3 cut(s) 627, 1058, 2169
Sau96I GGNCC 4 cut(s) 203, 931, 2099, 2239
SchI GAGTC 4 cut(s) 16, 1077, 1787, 2034
ScrFI CCNGG 6 cut(s) 100, 285, 454, 1018, 1518, 1581
SduI GDGCHC 9 cut(s) 156, 414, 562, 946, 1086, 1307, 1692, 1963, 2121
SfaNI GCATC 4 cut(s) 750, 772, 1021, 1881
SfcI CTRYAG 2 cut(s) 738, 782
Sfr274I CTCGAG 3 cut(s) 155, 947, 2366
SinI GGWCC 3 cut(s) 203, 931, 2099
SlaI CTCGAG 3 cut(s) 155, 947, 2366
SmiMI CAYNNNNRTG 1 cut(s) 2048
SmlI CTYRAG 7 cut(s) 111, 155, 221, 407, 947, 2348, 2366
SmoI CTYRAG 7 cut(s) 111, 155, 221, 407, 947, 2348, 2366
SpeI ACTAGT 1 cut(s) 1810
SphI GCATGC 3 cut(s) 581, 1319, 1898
SseBI AGGCCT 1 cut(s) 2057
SsiI CCGC 5 cut(s) 73, 493, 1057, 2105, 2392
SspI AATATT 1 cut(s) 1570
SspMI CTAG 6 cut(s) 266, 773, 818, 1061, 1811, 2211
SstI GAGCTC 2 cut(s) 156, 414
StuI AGGCCT 1 cut(s) 2057
StyD4I CCNGG 6 cut(s) 98, 283, 452, 1016, 1516, 1579
StyI CCWWGG 6 cut(s) 278, 804, 1035, 1642, 1734, 2092
TaiI ACGT 4 cut(s) 750, 1966, 1989, 2197
TaqI TCGA 8 cut(s) 25, 147, 156, 414, 948, 1933, 2142, 2367
TatI WGTACW 2 cut(s) 403, 1911
TauI GCSGC 1 cut(s) 1060
TfiI GAWTC 2 cut(s) 7, 1343
Tru1I TTAA 9 cut(s) 309, 363, 636, 840, 972, 986, 1905, 2403, 2437
Tru9I TTAA 9 cut(s) 309, 363, 636, 840, 972, 986, 1905, 2403, 2437
TscAI CASTG 8 cut(s) 175, 588, 742, 910, 1078, 1255, 1307, 1429
TseFI GTSAC 1 cut(s) 1069
TseI GCWGC 2 cut(s) 626, 2168
Tsp45I GTSAC 1 cut(s) 1069
TspDTI ATGAA 5 cut(s) 969, 1433, 1526, 2043, 2126
TspGWI ACGGA 1 cut(s) 506
TspRI CASTG 8 cut(s) 175, 588, 742, 910, 1078, 1255, 1307, 1429
VneI GTGCAC 1 cut(s) 1303
VpaK11BI GGWCC 3 cut(s) 203, 931, 2099
XapI RAATTY 3 cut(s) 296, 1002, 2250
XceI RCATGY 4 cut(s) 581, 1050, 1319, 1898
XcmI CCANNNNNNNNNTGG 2 cut(s) 1460, 1741
XhoI CTCGAG 3 cut(s) 155, 947, 2366
XmnI GAANNNNTTC 2 cut(s) 300, 960
XspI CTAG 6 cut(s) 266, 773, 818, 1061, 1811, 2211
Zsp2I ATGCAT 2 cut(s) 765, 1896
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.