Rorug01G0249000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000506
Physical Location & Seq
Reverse (-)
35716148 .. 35721611
5464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0249000.1

Sequence Viewer

Length: 2193 bp
ATGCTCAGTCAGCATAGCAGTAATCGGTTTTTGCAGATAGAAACAAAGTCTGGATGTTTTCTGCAGGAACTGCAGAAAATATGGGATGAAGTTGGAGTGCCTAATGTTGAAAGAGATACAATGCTTCTAAAAATCGAGCAGCAGTGCGTGGAGGTATTTAGGACAAAAGTTGATGAGGCGGAACAGTGTAAAGCTCAACTGCAGCAAGCAATTGCTAATTGTGAAGCAGAGTTTGTAGACATATGTGCTGTCCTGGGTGAGAAACCACCACATTTTGATCATAAGATCAGTGGAAGTTTGAAGAAAGAGCTTGAAATCATTATCCCACAACTAGAGGTCATGAAGAAGCGGAAAATTGAAAGGAAGGACCAATTGTTTTCTGTCTTAGATCAGTTGCAGAGACTTTCGACGGAAATAAGCAGGTCCTTGGAAGATAATCTGTACAAAATGGTGGTGGAAGAGACCGACTTGTCCTTGAAAAGGCTAGAAGAACTACATAGGCAGTTGCTTGAATATCAAGATGAGAAGAGGAACCGTTTGAAGCTGATAATGGACCACATGAGCATGCTAAACTCCCTGTGCTTGGTTCTTGGTATGGATTTTAAACACACAATTCATGAAATCCACCCCACCTTAGATCTTAATGGAGAAAAAGACGTAACGAACAGCACAATTGAGGGTTTGGCTAATTCGGTTCAGATATTGAGAGAGGTCAAGATACAGAGATGGCAGAGGCTTCAAACTTTCGCAAGTGCCCTCTTGGAGATGTGGAATCTGATGGATACACCCATGGAGGAGCAAAAGAAATTTCAGAATGTAACTAGTCGCATAGCTGCTTCAGAATCTGAAATCACTGAGCCTAACATTCTTTCTGTAGACCTTCTAAATGATGTTGAAGCTGAAGTGTCAAAGTTGGAGCAGCTCAAGTCAAGTAAGCTCAAAGAGATCCTTCTGAAAAAGAAGTTGGAACTGGAGGAGGTATGCAGACAGTCTCACATGGTTACAGAAATACTGAGTGCTGCAGAATACTCAAATGAAGCTATAGAGTCTGGAGCTGTGGACCCTGCATGCCTGTTGGAACAAATTGAGCTTCAAATTGCAAGGGCAAAAGAGGAAGCTCTAAGCAGGAAAGAAATACTAGAAAAGATTGAAAAGTGGTTGGCTGCTTGTCAAGAAGAATCCTGGCTAGAGGAGTACAATAGGGATGATAATCGCTATACAGCAGGAAGAGGTGCTCATCTTACTTTGAAACGTGCAGAGAAAGCGCGTGTTTTAGTAAACAAAATTCCCGGAATGGTGGAAACATTGACTTCAAAAGCCACAGCTTGGGAAAAAGAAAGAGGACTAGAATTCTTGTACGATGGTAGCCAACTGCTATCAATGCTCAAACAATATAGCATGCTAAGGCAAGAGAAAGAGCAAGAAAAGCAAAGACAGAGAGACCAGAAAAGATTTCAAGGACAACTGCTAGCTGAGAAGGAAGTACTTTATGGGTCAAAACACAGTGCATCTAAGAGCGGGAAGAAGGTTTCTGATCGAAAAATGTCTCTTGGTGGGCCATTAATGCTAAACCAGAAGATTGAGAAAGCTGCTCTACATGTCCACCCTATAAAGAAGGGTGACTCTCTCAATCAAAGGAGCTCTCACCAGCAATACAGTGGAGTAGAAGCTCTATCCTTTGGGAGGAAAGGCTCAGAGTTTTCTGGTCATTCAGTGAAGAATCAACCATCCACTGCTGCAAAGGCTCGTGAGATGGAGTCACCATTGATTCGGAAACCCCTTTCTCCTGTCTCTTCCAAAGTGTCATCGAAGGCCAACATTCTAAATTTCCTTGAAGATCAGAAAAGACAACAGAAGAAAAACATCGAAGCAGTACATCTTTTTAAAGAAGTCCCTATCATGTCACCTTCCATCGAAGCAGTACCACTTTTCAGTGAAGTGCCCATCATGACCCCTTCCAAGCCAATAATAGTCAATGGTGAAGAGAACAGTACCCCAAAGGCAATGCCAATTCAAGTGCCTCCCACTCCTTCAACAATATCAGTTCATACACTGACAGCCACACCAGCTACACCTTTCACCTCTGGTGCTCACAACAAGTTTGAGAAATCTGGTCGACAAGTTGAATACTCGTTCGAGGAGGTGAGAGCTGGTTATTTCAACCGTCCTAAATCATACAATGCAGGCAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

730

Amino Acids

83.13

Weight (kDa)

6.84

Isoelectric Point (pI)

51.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MAP65_ASE1 PF03999 21 - 505 1.6e-100 Microtubule associated protein (MAP65/ASE1 family)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000506)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G45990 AT2G45990 AT2G45990 AT2G45990
fragaria_vesca FvH4_3g44250 FvH4_3g44250 FvH4_3g44250 FvH4_3g44250 FvH4_3g44250 FvH4_7g14540 FvH4_7g14540 FvH4_7g14540 FvH4_7g14540 FvH4_7g14540 FvH4_7g14540 FvH4_7g14540 FvH4_7g14540 FvH4_7g14571 FvH4_7g14620 FvH4_7g14620 FvH4_7g14620 FvH4_7g14620 FvH4_7g14620 FvH4_7g14620 FvH4_7g14620 FvH4_7g14620 FvH4_7g14620 FvH4_7g14620 FvH4_7g14620 FvH4_7g14620
malus_domestica MD01G1065200.v1.1 MD09G1245400.v1.1
prunus_persica Prupe.2G172200_v2.0.a1
pyrus_communis pycom01g09450
rosa_chinensis RchiOBHm_Chr1g0355961 RchiOBHm_Chr1g0356011 RchiOBHm_Chr1g0356041 RchiOBHm_Chr1g0356051 RchiOBHm_Chr1g0356101 RchiOBHm_Chr1g0356141
rosa_laevigata RLG00000028102 RLG00000028107 RLG00000028108 RLG00000028110 RLG00000028112
rosa_multiflora Rmu_sc0002569.1_g000001 Rmu_sc0002569.1_g000022 Rmu_sc0003229.1_g000002 Rmu_sc0004705.1_g000007 Rmu_sc0007127.1_g000003 Rmu_sc0007127.1_g000007 Rmu_sc0011003.1_g000003 Rmu_sc0014206.1_g000012
rosa_roxburghii Rroxscaffold_4G00299780 Rroxscaffold_4G00299790 Rroxscaffold_4G00299810 Rroxscaffold_4G00299820 Rroxscaffold_4G00299870 Rroxscaffold_4G00299890
rosa_rugosa Rorug01G0249000 Rorug01G0249200 Rorug01G0249300 Rorug01G0249400 Rorug01G0249400 Rorug01G0249500 Rorug01G0249600
rosa_samantha Rh1BG230700 Rh1BG230800 Rh1BG230900 Rh1BG231200 Rh1BG231300 Rh1CG041500 Rh1CG244900 Rh1CG245500 Rh1CG245600 Rh1CG246100 Rh1CG246200 Rh1DG028400 Rh1DG258800 Rh1DG258900 Rh1DG259000
rosa_wichuraiana Rw1G023130 Rw1G023160 Rw1G023170 Rw1G023180 Rw1G023220 Rw1G023230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 469
Acc36I ACCTGC 1 cut(s) 411
AccB7I CCANNNNNTGG 1 cut(s) 1326
AccBSI CCGCTC 1 cut(s) 1518
AccI GTMKAC 3 cut(s) 237, 876, 2116
AccII CGCG 1 cut(s) 1267
AciI CCGC 3 cut(s) 179, 349, 1518
AclWI GGATC 1 cut(s) 940
AcsI RAATTY 4 cut(s) 806, 1284, 1349, 1825
AcuI CTGAAG 2 cut(s) 822, 921
AfaI GTAC 7 cut(s) 443, 1196, 1358, 1485, 1875, 1923, 1993
AfiI CCNNNNNNNGG 4 cut(s) 480, 583, 1326, 1683
AflIII ACRYGT 1 cut(s) 1597
AhlI ACTAGT 1 cut(s) 821
AjnI CCWGG 2 cut(s) 252, 1181
AjuI GAANNNNNNNTTGG 2 cut(s) 947, 979
Alw21I GWGCWC 3 cut(s) 1237, 1643, 2092
Alw26I GTCTC 6 cut(s) 394, 455, 996, 1434, 1551, 1795
AlwI GGATC 1 cut(s) 940
AlwNI CAGNNNCTG 2 cut(s) 70, 845
AoxI GGCC 2 cut(s) 1556, 1812
ApeKI GCWGC 8 cut(s) 139, 202, 833, 919, 1019, 1163, 1589, 1736
ApoI RAATTY 4 cut(s) 806, 1284, 1349, 1825
AseI ATTAAT 1 cut(s) 1562
AspLEI GCGC 1 cut(s) 1267
AspS9I GGNCC 5 cut(s) 367, 423, 553, 1060, 1556
AsuC2I CCSGG 1 cut(s) 1290
AsuHPI GGTGA 8 cut(s) 269, 1631, 1637, 1752, 1896, 1991, 2071, 2155
AsuNHI GCTAGC 1 cut(s) 1468
AvaII GGWCC 4 cut(s) 367, 423, 553, 1060
BaeGI GKGCMC 2 cut(s) 757, 1944
BanII GRGCYC 1 cut(s) 1643
BauI CACGAG 1 cut(s) 1746
Bbv12I GWGCWC 3 cut(s) 1237, 1643, 2092
BbvI GCAGC 8 cut(s) 151, 214, 820, 931, 1006, 1150, 1576, 1723
BccI CCATC 7 cut(s) 720, 772, 1355, 1735, 1747, 1919, 1952
BciT130I CCWGG 2 cut(s) 254, 1183
BciVI GTATCC 1 cut(s) 775
BclI TGATCA 1 cut(s) 277
BcnI CCSGG 1 cut(s) 1290
BcoDI GTCTC 6 cut(s) 394, 455, 996, 1434, 1551, 1795
BcuI ACTAGT 1 cut(s) 821
BfaI CTAG 7 cut(s) 332, 485, 822, 1139, 1187, 1346, 1469
BfmI CTRYAG 6 cut(s) 62, 71, 200, 873, 1020, 1041
BfuAI ACCTGC 1 cut(s) 411
BfuI GTATCC 1 cut(s) 775
BglII AGATCT 1 cut(s) 637
BisI GCNGC 8 cut(s) 140, 203, 834, 920, 1020, 1164, 1590, 1737
BlsI GCNGC 8 cut(s) 141, 204, 835, 921, 1021, 1165, 1591, 1738
BmcAI AGTACT 1 cut(s) 1485
Bme1390I CCNGG 3 cut(s) 254, 1183, 1290
Bme18I GGWCC 4 cut(s) 367, 423, 553, 1060
BmgT120I GGNCC 5 cut(s) 367, 423, 553, 1060, 1556
BmiI GGNNCC 2 cut(s) 533, 1062
BmrFI CCNGG 3 cut(s) 254, 1183, 1290
BmsI GCATC 1 cut(s) 1517
BmtI GCTAGC 1 cut(s) 1472
BpmI CTGGAG 2 cut(s) 992, 1071
Bpu10I CCTNAGC 1 cut(s) 1403
BpuEI CTTGAG 1 cut(s) 908
BpuMI CCSGG 1 cut(s) 1290
BsaBI GATNNNNATC 1 cut(s) 1209
BsaI GGTCTC 2 cut(s) 455, 1434
BsaJI CCNNGG 3 cut(s) 253, 426, 789
Bsc4I CCNNNNNNNGG 4 cut(s) 480, 583, 1326, 1683
Bse1I ACTGG 1 cut(s) 975
Bse3DI GCAATG 1 cut(s) 2010
Bse8I GATNNNNATC 1 cut(s) 1209
BseBI CCWGG 2 cut(s) 254, 1183
BseDI CCNNGG 3 cut(s) 253, 426, 789
BseGI GGATG 4 cut(s) 59, 91, 1210, 1727
BseJI GATNNNNATC 1 cut(s) 1209
BseLI CCNNNNNNNGG 4 cut(s) 480, 583, 1326, 1683
BseMI GCAATG 1 cut(s) 2010
BseMII CTCAG 5 cut(s) 19, 846, 1004, 1464, 1707
BseNI ACTGG 1 cut(s) 975
BseRI GAGGAG 4 cut(s) 809, 989, 1205, 2153
BseSI GKGCMC 2 cut(s) 757, 1944
BseXI GCAGC 8 cut(s) 151, 214, 820, 931, 1006, 1150, 1576, 1723
BsgI GTGCAG 1 cut(s) 1275
Bsh1236I CGCG 1 cut(s) 1267
BshFI GGCC 2 cut(s) 1558, 1814
BsiHKAI GWGCWC 3 cut(s) 1237, 1643, 2092
BsiSI CCGG 1 cut(s) 1290
BslFI GGGAC 1 cut(s) 1877
BslI CCNNNNNNNGG 4 cut(s) 480, 583, 1326, 1683
BsmAI GTCTC 6 cut(s) 394, 455, 996, 1434, 1551, 1795
BsmFI GGGAC 1 cut(s) 1877
BsnI GGCC 2 cut(s) 1558, 1814
Bso31I GGTCTC 2 cut(s) 455, 1434
Bsp1286I GDGCHC 5 cut(s) 757, 1237, 1643, 1944, 2092
Bsp1407I TGTACA 1 cut(s) 441
Bsp143I GATC 7 cut(s) 277, 285, 388, 637, 945, 1534, 1837
Bsp19I CCATGG 1 cut(s) 789
BspACI CCGC 3 cut(s) 179, 349, 1518
BspANI GGCC 2 cut(s) 1558, 1814
BspCNI CTCAG 5 cut(s) 18, 847, 1005, 1465, 1706
BspFNI CGCG 1 cut(s) 1267
BspHI TCATGA 3 cut(s) 339, 616, 1947
BspLI GGNNCC 2 cut(s) 533, 1062
BspMAI CTGCAG 4 cut(s) 66, 75, 204, 1024
BspMI ACCTGC 1 cut(s) 411
BspOI GCTAGC 1 cut(s) 1472
BspPI GGATC 1 cut(s) 940
BspTNI GGTCTC 2 cut(s) 455, 1434
BsrBI CCGCTC 1 cut(s) 1518
BsrDI GCAATG 1 cut(s) 2010
BsrGI TGTACA 1 cut(s) 441
BsrI ACTGG 1 cut(s) 975
BssECI CCNNGG 3 cut(s) 253, 426, 789
BssMI GATC 7 cut(s) 277, 285, 388, 637, 945, 1534, 1837
BssSI CACGAG 1 cut(s) 1746
BssT1I CCWWGG 2 cut(s) 426, 789
Bst2BI CACGAG 1 cut(s) 1746
Bst2UI CCWGG 2 cut(s) 254, 1183
Bst4CI ACNGT 7 cut(s) 186, 536, 990, 1505, 1658, 1991, 2165
Bst6I CTCTTC 5 cut(s) 453, 521, 1222, 1798, 1977
BstAPI GCANNNNNTGC 1 cut(s) 70
BstAUI TGTACA 1 cut(s) 441
BstC8I GCNNGC 6 cut(s) 207, 566, 1069, 1400, 1470, 2185
BstDSI CCRYGG 1 cut(s) 789
BstENI CCTNNNNNAGG 2 cut(s) 478, 1681
BstF5I GGATG 4 cut(s) 59, 91, 1210, 1727
BstFNI CGCG 1 cut(s) 1267
BstHHI GCGC 1 cut(s) 1267
BstKTI GATC 7 cut(s) 280, 288, 391, 640, 948, 1537, 1840
BstMAI GTCTC 6 cut(s) 394, 455, 996, 1434, 1551, 1795
BstMBI GATC 7 cut(s) 277, 285, 388, 637, 945, 1534, 1837
BstMWI GCNNNNNNNGC 8 cut(s) 10, 70, 1262, 1381, 1426, 1564, 1742, 2066
BstNI CCWGG 2 cut(s) 254, 1183
BstNSI RCATGY 4 cut(s) 568, 1071, 1402, 1601
BstSCI CCNGG 3 cut(s) 252, 1181, 1288
BstSFI CTRYAG 6 cut(s) 62, 71, 200, 873, 1020, 1041
BstSLI GKGCMC 2 cut(s) 757, 1944
BstUI CGCG 1 cut(s) 1267
BstV1I GCAGC 8 cut(s) 151, 214, 820, 931, 1006, 1150, 1576, 1723
BstX2I RGATCY 2 cut(s) 637, 945
BstYI RGATCY 2 cut(s) 637, 945
BsuI GTATCC 1 cut(s) 775
BsuRI GGCC 2 cut(s) 1558, 1814
BtgI CCRYGG 1 cut(s) 789
BtsCI GGATG 4 cut(s) 59, 91, 1210, 1727
BtsI GCAGTG 2 cut(s) 149, 1731
BveI ACCTGC 1 cut(s) 411
Cac8I GCNNGC 6 cut(s) 207, 566, 1069, 1400, 1470, 2185
CaiI CAGNNNCTG 2 cut(s) 70, 845
CciI TCATGA 3 cut(s) 339, 616, 1947
CfoI GCGC 1 cut(s) 1267
Cfr13I GGNCC 5 cut(s) 367, 423, 553, 1060, 1556
Csp6I GTAC 7 cut(s) 442, 1195, 1357, 1484, 1874, 1922, 1992
CviQI GTAC 7 cut(s) 442, 1195, 1357, 1484, 1874, 1922, 1992
DpnI GATC 7 cut(s) 279, 287, 390, 639, 947, 1536, 1839
DpnII GATC 7 cut(s) 277, 285, 388, 637, 945, 1534, 1837
DraI TTTAAA 2 cut(s) 604, 1885
DrdI GACNNNNNNGTC 1 cut(s) 469
DseDI GACNNNNNNGTC 1 cut(s) 469
Eam1104I CTCTTC 5 cut(s) 453, 521, 1222, 1798, 1977
EarI CTCTTC 5 cut(s) 453, 521, 1222, 1798, 1977
EciI GGCGGA 1 cut(s) 194
Ecl136II GAGCTC 1 cut(s) 1641
Eco130I CCWWGG 2 cut(s) 426, 789
Eco24I GRGCYC 1 cut(s) 1643
Eco31I GGTCTC 2 cut(s) 455, 1434
Eco47I GGWCC 4 cut(s) 367, 423, 553, 1060
Eco53kI GAGCTC 1 cut(s) 1641
Eco57I CTGAAG 2 cut(s) 822, 921
EcoICRI GAGCTC 1 cut(s) 1641
EcoNI CCTNNNNNAGG 2 cut(s) 478, 1681
EcoO109I RGGNCCY 1 cut(s) 423
EcoRI GAATTC 1 cut(s) 1349
EcoRII CCWGG 2 cut(s) 252, 1181
EcoT14I CCWWGG 2 cut(s) 426, 789
EcoT38I GRGCYC 1 cut(s) 1643
ErhI CCWWGG 2 cut(s) 426, 789
FalI AAGNNNNNCTT 2 cut(s) 933, 965
FaqI GGGAC 1 cut(s) 1877
FauI CCCGC 1 cut(s) 1511
FauNDI CATATG 1 cut(s) 242
FbaI TGATCA 1 cut(s) 277
FblI GTMKAC 3 cut(s) 237, 876, 2116
Fnu4HI GCNGC 8 cut(s) 140, 203, 834, 920, 1020, 1164, 1590, 1737
FokI GGATG 4 cut(s) 66, 98, 1217, 1714
FriOI GRGCYC 1 cut(s) 1643
Fsp4HI GCNGC 8 cut(s) 140, 203, 834, 920, 1020, 1164, 1590, 1737
FspBI CTAG 7 cut(s) 332, 485, 822, 1139, 1187, 1346, 1469
GlaI GCGC 1 cut(s) 1266
GluI GCNGC 8 cut(s) 140, 203, 834, 920, 1020, 1164, 1590, 1737
GsuI CTGGAG 2 cut(s) 992, 1071
HaeIII GGCC 2 cut(s) 1558, 1814
HapII CCGG 1 cut(s) 1290
HhaI GCGC 1 cut(s) 1267
Hin6I GCGC 1 cut(s) 1265
HinP1I GCGC 1 cut(s) 1265
HincII GTYRAC 1 cut(s) 2117
HindII GTYRAC 1 cut(s) 2117
HinfI GANTC 8 cut(s) 772, 842, 1046, 1178, 1622, 1720, 1757, 1768
HpaII CCGG 1 cut(s) 1290
HphI GGTGA 8 cut(s) 269, 1631, 1637, 1752, 1896, 1991, 2071, 2155
Hpy166II GTNNAC 6 cut(s) 238, 877, 1060, 1279, 1603, 2117
Hpy188III TCNNGA 9 cut(s) 51, 340, 518, 617, 715, 1050, 1172, 1748, 1948
Hpy8I GTNNAC 6 cut(s) 238, 877, 1060, 1279, 1603, 2117
Hpy99I CGWCG 1 cut(s) 412
HpyCH4III ACNGT 7 cut(s) 186, 536, 990, 1505, 1658, 1991, 2165
HpyCH4IV ACGT 2 cut(s) 657, 1252
HpyF10VI GCNNNNNNNGC 8 cut(s) 10, 70, 1262, 1381, 1426, 1564, 1742, 2066
HpySE526I ACGT 2 cut(s) 657, 1252
HspAI GCGC 1 cut(s) 1265
Ksp22I TGATCA 1 cut(s) 277
Kzo9I GATC 7 cut(s) 277, 285, 388, 637, 945, 1534, 1837
LmnI GCTCC 4 cut(s) 796, 916, 1052, 1638
Lsp1109I GCAGC 8 cut(s) 151, 214, 820, 931, 1006, 1150, 1576, 1723
LweI GCATC 1 cut(s) 1517
MaeI CTAG 7 cut(s) 332, 485, 822, 1139, 1187, 1346, 1469
MaeII ACGT 2 cut(s) 657, 1252
MaeIII GTNAC 6 cut(s) 658, 817, 1000, 1619, 1758, 1902
MalI GATC 7 cut(s) 279, 287, 390, 639, 947, 1536, 1839
MbiI CCGCTC 1 cut(s) 1518
MboI GATC 7 cut(s) 277, 285, 388, 637, 945, 1534, 1837
MfeI CAATTG 3 cut(s) 210, 371, 672
MflI RGATCY 2 cut(s) 637, 945
MhlI GDGCHC 5 cut(s) 757, 1237, 1643, 1944, 2092
MlyI GAGTC 3 cut(s) 1055, 1616, 1766
MmeI TCCRAC 4 cut(s) 73, 894, 945, 1056
MseI TTAA 4 cut(s) 603, 642, 1562, 1884
MslI CAYNNNNRTG 1 cut(s) 563
MspI CCGG 1 cut(s) 1290
MspR9I CCNGG 3 cut(s) 254, 1183, 1290
MunI CAATTG 3 cut(s) 210, 371, 672
MvaI CCWGG 2 cut(s) 254, 1183
MvnI CGCG 1 cut(s) 1267
MwoI GCNNNNNNNGC 8 cut(s) 10, 70, 1262, 1381, 1426, 1564, 1742, 2066
NciI CCSGG 1 cut(s) 1290
NcoI CCATGG 1 cut(s) 789
NdeI CATATG 1 cut(s) 242
NdeII GATC 7 cut(s) 277, 285, 388, 637, 945, 1534, 1837
NheI GCTAGC 1 cut(s) 1468
NlaIV GGNNCC 2 cut(s) 533, 1062
NmuCI GTSAC 3 cut(s) 1619, 1758, 1902
NspI RCATGY 4 cut(s) 568, 1071, 1402, 1601
PaeI GCATGC 3 cut(s) 568, 1071, 1402
PagI TCATGA 3 cut(s) 339, 616, 1947
PciI ACATGT 1 cut(s) 1597
PfeI GAWTC 5 cut(s) 772, 842, 1178, 1720, 1768
PflMI CCANNNNNTGG 1 cut(s) 1326
PfoI TCCNGGA 1 cut(s) 1288
PkrI GCNGC 8 cut(s) 141, 204, 835, 921, 1021, 1165, 1591, 1738
PleI GAGTC 3 cut(s) 1054, 1616, 1765
PpsI GAGTC 3 cut(s) 1054, 1616, 1765
PpuMI RGGWCCY 1 cut(s) 423
PscI ACATGT 1 cut(s) 1597
PshBI ATTAAT 1 cut(s) 1562
Psp124BI GAGCTC 1 cut(s) 1643
Psp5II RGGWCCY 1 cut(s) 423
Psp6I CCWGG 2 cut(s) 252, 1181
PspGI CCWGG 2 cut(s) 252, 1181
PspN4I GGNNCC 2 cut(s) 533, 1062
PspPI GGNCC 5 cut(s) 367, 423, 553, 1060, 1556
PspPPI RGGWCCY 1 cut(s) 423
PstI CTGCAG 4 cut(s) 66, 75, 204, 1024
PstNI CAGNNNCTG 2 cut(s) 70, 845
PsuI RGATCY 2 cut(s) 637, 945
RsaI GTAC 7 cut(s) 443, 1196, 1358, 1485, 1875, 1923, 1993
RsaNI GTAC 7 cut(s) 442, 1195, 1357, 1484, 1874, 1922, 1992
RseI CAYNNNNRTG 1 cut(s) 563
SacI GAGCTC 1 cut(s) 1643
SalI GTCGAC 1 cut(s) 2115
SaqAI TTAA 4 cut(s) 603, 642, 1562, 1884
SatI GCNGC 8 cut(s) 140, 203, 834, 920, 1020, 1164, 1590, 1737
Sau3AI GATC 7 cut(s) 277, 285, 388, 637, 945, 1534, 1837
Sau96I GGNCC 5 cut(s) 367, 423, 553, 1060, 1556
ScaI AGTACT 1 cut(s) 1485
SchI GAGTC 3 cut(s) 1055, 1616, 1766
ScrFI CCNGG 3 cut(s) 254, 1183, 1290
SduI GDGCHC 5 cut(s) 757, 1237, 1643, 1944, 2092
SfaNI GCATC 1 cut(s) 1517
SfcI CTRYAG 6 cut(s) 62, 71, 200, 873, 1020, 1041
SinI GGWCC 4 cut(s) 367, 423, 553, 1060
SmiMI CAYNNNNRTG 1 cut(s) 563
SmlI CTYRAG 1 cut(s) 923
SmoI CTYRAG 1 cut(s) 923
SpeI ACTAGT 1 cut(s) 821
SphI GCATGC 3 cut(s) 568, 1071, 1402
SsiI CCGC 3 cut(s) 179, 349, 1518
SspMI CTAG 7 cut(s) 332, 485, 822, 1139, 1187, 1346, 1469
SstI GAGCTC 1 cut(s) 1643
StyD4I CCNGG 3 cut(s) 252, 1181, 1288
StyI CCWWGG 2 cut(s) 426, 789
TaaI ACNGT 7 cut(s) 186, 536, 990, 1505, 1658, 1991, 2165
TaiI ACGT 2 cut(s) 660, 1255
TaqI TCGA 8 cut(s) 135, 407, 1537, 1808, 1866, 1914, 2116, 2136
TaqII GACCGA 1 cut(s) 479
TatI WGTACW 4 cut(s) 441, 1194, 1483, 1873
TfiI GAWTC 5 cut(s) 772, 842, 1178, 1720, 1768
Tru1I TTAA 4 cut(s) 603, 642, 1562, 1884
Tru9I TTAA 4 cut(s) 603, 642, 1562, 1884
TseFI GTSAC 3 cut(s) 1619, 1758, 1902
TseI GCWGC 8 cut(s) 139, 202, 833, 919, 1019, 1163, 1589, 1736
Tsp45I GTSAC 3 cut(s) 1619, 1758, 1902
TspDTI ATGAA 6 cut(s) 102, 356, 605, 633, 1050, 2036
TspGWI ACGGA 1 cut(s) 425
Van91I CCANNNNNTGG 1 cut(s) 1326
VpaK11BI GGWCC 4 cut(s) 367, 423, 553, 1060
VspI ATTAAT 1 cut(s) 1562
XagI CCTNNNNNAGG 2 cut(s) 478, 1681
XapI RAATTY 4 cut(s) 806, 1284, 1349, 1825
XceI RCATGY 4 cut(s) 568, 1071, 1402, 1601
XcmI CCANNNNNNNNNTGG 1 cut(s) 1655
XmiI GTMKAC 3 cut(s) 237, 876, 2116
XspI CTAG 7 cut(s) 332, 485, 822, 1139, 1187, 1346, 1469
ZrmI AGTACT 1 cut(s) 1485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.