Rorug05G0165800

YLS9-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
15357786 .. 15360749
2964 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0165800.1

Sequence Viewer

Length: 2964 bp
ATGGATAGTTCTGCAAACTTTCCCAACCCTGTCTATCATTTCAATATTGCTTTCTGTTTCCTCCTTTTGTTTTTAGCCTCTTCATGCCTAAACACTAGTAAACTCTGCTTGGGAGATGGCCTTCCAATTGTGAAATGCATCGACACAGAGAGAAGCGCGCTTCTCATCTTTAAGGCAGATCTTATCGATGCTTCGGGTAGGCTATCATCTTGGGAAGGTCAAAATTGTTGTCAATGGAAAGGGATTTCATGCAACAACCGCACTGGTCATGTTGAAAAGATGGACCTCCGCAATACAAGTCCAGCTCCATCCATTGATGCTGAAGACCAGGAGTTTGAGGCTTATGAAGAGTCCTTTTTGGGGGGTAAGATAAATCCTTCTTTGCTTAGCTTGAAATATATGAGTTACTTAGACTTGAGCTCGAATGGCTTTCAAGGGCTTCAAATTCCTAATTTCTTTGGTCAACTTGAAAGTCTGAAGTATCTCAATGTCTCATCTTCATCTTTTGAGGGACAGATTCCACCTCATCTTGGTAACCTATCAAACTTGAACTATCTTGACCTCAGTGGTAACTATTTATTGGAAATTTCTTCCATAAATTTGAATTGGCTTTCTCATCTCTCCTCTCTAAAATACCTCAGTCTGACTGAAGTGAACCTTAGCAATGCAGGAGCCAGTTGGCTACATGTTGTTAACATGCTTCCTTCCATGCTAGAGTTACACTTGTCTAGATGCAACATTGAAAGCCTTCCACCTTCACTTCGCACCATGAACCTCACATCACTTTTGATCCTTGATATGTCATTCAATGATTTTAAGTTTCCATTTCCAAAGTGGGTCTTTAATCTAACTAGCCTCAGAGAACTTCACTTGGCCAAGAATTCTTTCAGAGGTCCCTTTCCTAATGATTTCGTTAACCTGGAATCATTGGAAGAACTTGATTTATCTCTTAATGACCTTCACGGTCGAATTCCCAAATTCTTTGGAAATCTCTGCAACCTAAAGACCTTAATTCTTGCGGGAAACGCATTTGATCAGGGTATTCCAGAGTTTTTGGATGGTTTATCAGGTTGTGCAAATAATAAGTTGGAGTCACTAGACTTGTCTAGTAATAAGCTGGTAGGCGAATTGCCTGCCTCCTTAGGTATGCTCCCCCATTTGCAGTACCTTAACCTATTCGACAATAATTTGAATGGATCCATCCCAGAAAGTTTGGGACGACTCTCTGAGCTAGTTCATCTAGACCTGTCGGGCAACTCATTGGTAGGCTTTTTAACTGAAGCCCATTTCATAGATCTCGCAAAGTTAAAATACATTGCGCTGGGCAATATCAGTATCCCCTACCCGCTACCCATCATTTTCAATGTGGCTCATGAGTGGGTACCTCCTTTCAAGCTTGACACCATTGCCCTGACGAACTGTCAAGTAGGTCCTGCCTTTTCACTATGGCTTCTATCTCAAACTGAACTAGTATATGTCGCTCTAAGCAATACAGGCATCTCGGATTCCATACCAGACGAATGGTTCGTGAAAATATCTTCCCAACTCCAATTTTTGGATTTATCTTTCAACAAAATTCGTGGAAAGCTTCCAGTCCAATTGATAGTTCCAAATTTAGTGACTCTAGATTTGAGCCATAATCAATTCCACGGCTCACTCCCGCTTTGGTTGTGTAAGGAGGCTTCCAAACTAAATCTTGCTAGCAATTCATTTTACGGGCCAATTCCGTTAACTCTTGACCAACATTTTCCAAAATTGCGAGAACTGCATCTCTATGAAAATTATTTGAATGGCACGATTCCATCCTCTGTTTGCAACATGCAGAAGTTGTTAGTCTTTTCTCTAAGAAGCAACAACATTTCTGGAGAATTTCCTCAAGCATGGAGTACGTGGGGTGACATAGACATTGTAGATGTTGGAAACAATCATCTCTCAGGAAATATTCCCAGTTCAATGGGTATCCCAAGTTCACTTTTTATGTTGTCGATGAAGAACAACAAATTAGATGGTGAAATCCCGATGGCCTTGGGAAATAGCACCAACCTGAGGAGTATTGATCTTGGTGGTAATAGATTTACTGGAAACCTACCTTCATGGATAGGAACAAATGTATCCAAGGTGTTTATCTTACGGCTGCCATCCAATTCTCTAAGTGGACATATTCCCCAGCAATTGTGCAATCTTGACCAACTTCACCTCCTAGATCTTGGTCATAACCACCTCTCAGGTACTATACCAACGTGTTTGAATAATATGACTGCTCTAGTAGATGTCAAGTTCAATGCTTATGCCTTATATCATGCGTATGAACAACAAATAATGGTGACCAGAGGAAGAGAATTCCAATTTAACAAGACTCTGAGGTGGGTAAAAAGCATAGATCTTTCCTCAAATAGTTTGGAAGGTGAAATCCCTGAAAAAATCTGCAGTCTCTTCGCATTGGTTATCTTGAACTTGTCGATGAATCATCTAAGTGGAAATATTCCCTCAAAAATTGGAAACTTGCGGTCGCTCGAATTCCTTGATCTCTCAGGCAACCACCTTTCGGGACGAATTCCTCAGAGTATTTCATCTTTAACCTTTTTGTCTCACTTGAATTTGTCTTACAACGAATTGAGCGGAAGAATTCCTTTGGGCAACCAACTTCAAGCACTTGATGATTCGACCAATATTTATGGAGGCAATCCATCACTTTGTGGGTTTCCCCTTTTAAACAAGTGCCCAGGAGATGACACACCTCCACAACCCACTTTTCCTCGTGGGAAAAGACATGAAGATGATAAAAAGCTTGGTTTCTACATCAGCGCAGTGCTCGGCTTTGTCGTAGGCTTTTGGGGTGTTTGTGGCACATTACTCATAAAGAAGTCATGGAGGTATGCCTACTTTCAATTTTTTGATAGGATCCAAGACAAGGTAGCGGTGGCAGTTGCATTGAAAATAGCCAATTTCAAGAGGAAAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

987

Amino Acids

109.65

Weight (kDa)

6.01

Isoelectric Point (pI)

35.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 48 - 85 9e-11 Leucine rich repeat N-terminal domain
LRR_8 PF13855 135 - 193 1.5e-06 Leucine rich repeat
LRR_14 PF23598 197 - 437 5.1e-15 Leucine-rich repeat region
LRR_8 PF13855 262 - 320 2.3e-06 Leucine rich repeat
LRR_8 PF13855 362 - 421 3.7e-08 Leucine rich repeat
LRR_14 PF23598 798 - 871 5.7e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1381
AccB1I GGYRCC 1 cut(s) 1381
AccB7I CCANNNNNTGG 1 cut(s) 1555
AccBSI CCGCTC 1 cut(s) 2619
AccII CGCG 1 cut(s) 158
AciI CCGC 8 cut(s) 259, 289, 1019, 1346, 1661, 2506, 2619, 2918
AclWI GGATC 5 cut(s) 784, 1191, 1204, 2896, 2909
AcoI YGGCCR 1 cut(s) 873
AcuI CTGAAG 4 cut(s) 342, 497, 669, 1299
AdeI CACNNNGTG 1 cut(s) 2696
AfaI GTAC 4 cut(s) 1166, 1383, 1888, 2230
AfiI CCNNNNNNNGG 6 cut(s) 360, 530, 1555, 2046, 2545, 2911
AflIII ACRYGT 2 cut(s) 685, 2240
AhdI GACNNNNNGTC 1 cut(s) 1419
AhlI ACTAGT 2 cut(s) 95, 1468
AjnI CCWGG 3 cut(s) 327, 918, 2722
AjuI GAANNNNNNNTTGG 4 cut(s) 869, 901, 1590, 1622
AluBI AGCT 8 cut(s) 305, 390, 420, 1117, 1231, 1396, 1588, 2788
AluI AGCT 8 cut(s) 305, 390, 420, 1117, 1231, 1396, 1588, 2788
Alw21I GWGCWC 2 cut(s) 422, 2814
Alw26I GTCTC 3 cut(s) 496, 2435, 2592
AlwI GGATC 5 cut(s) 784, 1191, 1204, 2896, 2909
AoxI GGCC 4 cut(s) 118, 873, 1718, 2022
ApeKI GCWGC 1 cut(s) 2134
ArsI GACNNNNNNTTYG 8 cut(s) 214, 246, 317, 349, 1508, 1540, 1612, 1644
Asp700I GAANNNNTTC 2 cut(s) 747, 884
Asp718I GGTACC 1 cut(s) 1381
AspLEI GCGC 4 cut(s) 158, 160, 1321, 2807
AspS9I GGNCC 4 cut(s) 283, 893, 1430, 1718
AsuHPI GGTGA 5 cut(s) 1907, 2021, 2186, 2335, 2417
AsuNHI GCTAGC 1 cut(s) 1700
AvaII GGWCC 3 cut(s) 283, 893, 1430
AxyI CCTNAGG 2 cut(s) 1141, 2045
BaeGI GKGCMC 1 cut(s) 2723
BaeI ACNNNNGTAYC 2 cut(s) 2094, 2127
BalI TGGCCA 1 cut(s) 875
BamHI GGATCC 2 cut(s) 1196, 2901
BanI GGYRCC 1 cut(s) 1381
BanII GRGCYC 1 cut(s) 422
BarI GAAGNNNNNNTAC 2 cut(s) 1666, 1698
BauI CACGAG 1 cut(s) 2757
BbsI GAAGAC 1 cut(s) 330
Bbv12I GWGCWC 2 cut(s) 422, 2814
BbvI GCAGC 1 cut(s) 2121
BceAI ACGGC 2 cut(s) 1666, 2147
BcgI CGANNNNNNTGC 4 cut(s) 1115, 1149, 2416, 2450
BciT130I CCWGG 3 cut(s) 329, 920, 2724
BciVI GTATCC 3 cut(s) 1346, 1970, 2122
BclI TGATCA 1 cut(s) 1033
BcoDI GTCTC 3 cut(s) 496, 2435, 2592
BcuI ACTAGT 2 cut(s) 95, 1468
BfmI CTRYAG 1 cut(s) 2425
BfuI GTATCC 3 cut(s) 1346, 1970, 2122
BglII AGATCT 4 cut(s) 178, 1294, 2203, 2380
BisI GCNGC 1 cut(s) 2135
BlpI GCTNAGC 1 cut(s) 386
BlsI GCNGC 1 cut(s) 2136
Bme1390I CCNGG 3 cut(s) 329, 920, 2724
Bme18I GGWCC 3 cut(s) 283, 893, 1430
BmeRI GACNNNNNGTC 1 cut(s) 1419
BmgT120I GGNCC 4 cut(s) 283, 893, 1430, 1718
BmiI GGNNCC 5 cut(s) 673, 895, 1198, 1383, 2903
BmrFI CCNGG 3 cut(s) 329, 920, 2724
BmrI ACTGGG 1 cut(s) 1941
BmsI GCATC 6 cut(s) 147, 178, 307, 722, 1506, 1777
BmtI GCTAGC 1 cut(s) 1704
BmuI ACTGGG 1 cut(s) 1941
BpiI GAAGAC 1 cut(s) 330
BpmI CTGGAG 1 cut(s) 1884
Bpu10I CCTNAGC 1 cut(s) 659
Bpu1102I GCTNAGC 1 cut(s) 386
BpuEI CTTGAG 2 cut(s) 436, 1860
Bsa29I ATCGAT 1 cut(s) 186
BsaAI YACGTR 1 cut(s) 1890
BsaJI CCNNGG 4 cut(s) 1648, 2025, 2115, 2722
BsaXI ACNNNNNCTCC 2 cut(s) 2181, 2211
Bsc4I CCNNNNNNNGG 6 cut(s) 360, 530, 1555, 2046, 2545, 2911
Bse1I ACTGG 5 cut(s) 268, 675, 1592, 1947, 2083
Bse21I CCTNAGG 2 cut(s) 1141, 2045
Bse3DI GCAATG 3 cut(s) 670, 1314, 1404
BseBI CCWGG 3 cut(s) 329, 920, 2724
BseCI ATCGAT 1 cut(s) 186
BseDI CCNNGG 4 cut(s) 1648, 2025, 2115, 2722
BseGI GGATG 5 cut(s) 308, 1063, 1200, 1802, 2138
BseLI CCNNNNNNNGG 6 cut(s) 360, 530, 1555, 2046, 2545, 2911
BseMI GCAATG 3 cut(s) 670, 1314, 1404
BseNI ACTGG 5 cut(s) 268, 675, 1592, 1947, 2083
BsePI GCGCGC 1 cut(s) 156
BseRI GAGGAG 2 cut(s) 613, 2062
BseSI GKGCMC 1 cut(s) 2723
BseXI GCAGC 1 cut(s) 2121
BseYI CCCAGC 2 cut(s) 1321, 2166
Bsh1236I CGCG 1 cut(s) 158
Bsh1285I CGRYCG 2 cut(s) 967, 2510
BshFI GGCC 4 cut(s) 120, 875, 1720, 2024
BshNI GGYRCC 1 cut(s) 1381
BshVI ATCGAT 1 cut(s) 186
BsiEI CGRYCG 2 cut(s) 967, 2510
BsiHKAI GWGCWC 2 cut(s) 422, 2814
BslFI GGGAC 4 cut(s) 525, 879, 1230, 2562
BslI CCNNNNNNNGG 6 cut(s) 360, 530, 1555, 2046, 2545, 2911
BsmAI GTCTC 3 cut(s) 496, 2435, 2592
BsmFI GGGAC 4 cut(s) 525, 879, 1230, 2562
BsnI GGCC 4 cut(s) 120, 875, 1720, 2024
Bsp1286I GDGCHC 3 cut(s) 422, 2723, 2814
Bsp1720I GCTNAGC 1 cut(s) 386
BspACI CCGC 8 cut(s) 259, 289, 1019, 1346, 1661, 2506, 2619, 2918
BspANI GGCC 4 cut(s) 120, 875, 1720, 2024
BspDI ATCGAT 1 cut(s) 186
BspFNI CGCG 1 cut(s) 158
BspHI TCATGA 1 cut(s) 1372
BspLI GGNNCC 5 cut(s) 673, 895, 1198, 1383, 2903
BspMAI CTGCAG 1 cut(s) 2429
BspOI GCTAGC 1 cut(s) 1704
BspPI GGATC 5 cut(s) 784, 1191, 1204, 2896, 2909
BspT107I GGYRCC 1 cut(s) 1381
BsrBI CCGCTC 1 cut(s) 2619
BsrDI GCAATG 3 cut(s) 670, 1314, 1404
BsrI ACTGG 5 cut(s) 268, 675, 1592, 1947, 2083
BssECI CCNNGG 4 cut(s) 1648, 2025, 2115, 2722
BssHII GCGCGC 1 cut(s) 156
BssSI CACGAG 1 cut(s) 2757
BssT1I CCWWGG 2 cut(s) 2025, 2115
Bst2BI CACGAG 1 cut(s) 2757
Bst2UI CCWGG 3 cut(s) 329, 920, 2724
Bst4CI ACNGT 2 cut(s) 965, 1421
Bst6I CTCTTC 4 cut(s) 85, 342, 2329, 2438
BstBAI YACGTR 1 cut(s) 1890
BstC8I GCNNGC 3 cut(s) 158, 1134, 1702
BstDSI CCRYGG 1 cut(s) 1648
BstEII GGTNACC 2 cut(s) 533, 2323
BstF5I GGATG 5 cut(s) 308, 1063, 1200, 1802, 2138
BstFNI CGCG 1 cut(s) 158
BstHHI GCGC 4 cut(s) 158, 160, 1321, 2807
BstMAI GTCTC 3 cut(s) 496, 2435, 2592
BstMCI CGRYCG 2 cut(s) 967, 2510
BstMWI GCNNNNNNNGC 5 cut(s) 258, 426, 1025, 1494, 1765
BstNI CCWGG 3 cut(s) 329, 920, 2724
BstNSI RCATGY 3 cut(s) 689, 700, 1822
BstPI GGTNACC 2 cut(s) 533, 2323
BstSCI CCNGG 3 cut(s) 327, 918, 2722
BstSFI CTRYAG 1 cut(s) 2425
BstSLI GKGCMC 1 cut(s) 2723
BstUI CGCG 1 cut(s) 158
BstV1I GCAGC 1 cut(s) 2121
BstV2I GAAGAC 1 cut(s) 330
BstX2I RGATCY 6 cut(s) 178, 1196, 1294, 2203, 2380, 2901
BstXI CCANNNNNNTGG 2 cut(s) 1521, 1954
BstYI RGATCY 6 cut(s) 178, 1196, 1294, 2203, 2380, 2901
Bsu15I ATCGAT 1 cut(s) 186
Bsu36I CCTNAGG 2 cut(s) 1141, 2045
BsuI GTATCC 3 cut(s) 1346, 1970, 2122
BsuRI GGCC 4 cut(s) 120, 875, 1720, 2024
BsuTUI ATCGAT 1 cut(s) 186
BtgI CCRYGG 1 cut(s) 1648
BtsCI GGATG 5 cut(s) 308, 1063, 1200, 1802, 2138
BtsI GCAGTG 1 cut(s) 2814
BtsIMutI CAGTG 3 cut(s) 261, 571, 2814
Cac8I GCNNGC 3 cut(s) 158, 1134, 1702
CciI TCATGA 1 cut(s) 1372
CfoI GCGC 4 cut(s) 158, 160, 1321, 2807
Cfr13I GGNCC 4 cut(s) 283, 893, 1430, 1718
ClaI ATCGAT 1 cut(s) 186
Csp6I GTAC 4 cut(s) 1165, 1382, 1887, 2229
CspCI CAANNNNNGTGG 2 cut(s) 1561, 1596
CviQI GTAC 4 cut(s) 1165, 1382, 1887, 2229
DraI TTTAAA 1 cut(s) 2712
DraIII CACNNNGTG 1 cut(s) 2696
DriI GACNNNNNGTC 1 cut(s) 1419
EaeI YGGCCR 1 cut(s) 873
Eam1104I CTCTTC 4 cut(s) 85, 342, 2329, 2438
Eam1105I GACNNNNNGTC 1 cut(s) 1419
EarI CTCTTC 4 cut(s) 85, 342, 2329, 2438
Ecl136II GAGCTC 1 cut(s) 420
Eco130I CCWWGG 2 cut(s) 2025, 2115
Eco24I GRGCYC 1 cut(s) 422
Eco47I GGWCC 3 cut(s) 283, 893, 1430
Eco53kI GAGCTC 1 cut(s) 420
Eco57I CTGAAG 4 cut(s) 342, 497, 669, 1299
Eco81I CCTNAGG 2 cut(s) 1141, 2045
Eco91I GGTNACC 2 cut(s) 533, 2323
EcoICRI GAGCTC 1 cut(s) 420
EcoO109I RGGNCCY 2 cut(s) 893, 1430
EcoO65I GGTNACC 2 cut(s) 533, 2323
EcoRI GAATTC 6 cut(s) 880, 969, 2339, 2516, 2553, 2625
EcoRII CCWGG 3 cut(s) 327, 918, 2722
EcoT14I CCWWGG 2 cut(s) 2025, 2115
EcoT22I ATGCAT 1 cut(s) 140
EcoT38I GRGCYC 1 cut(s) 422
ErhI CCWWGG 2 cut(s) 2025, 2115
FalI AAGNNNNNCTT 6 cut(s) 642, 674, 824, 856, 2614, 2646
FaqI GGGAC 4 cut(s) 525, 879, 1230, 2562
FauI CCCGC 3 cut(s) 1012, 1353, 1668
FbaI TGATCA 1 cut(s) 1033
Fnu4HI GCNGC 1 cut(s) 2135
FokI GGATG 5 cut(s) 295, 1070, 1187, 1789, 2125
FriOI GRGCYC 1 cut(s) 422
Fsp4HI GCNGC 1 cut(s) 2135
GlaI GCGC 4 cut(s) 157, 159, 1320, 2806
GluI GCNGC 1 cut(s) 2135
GsaI CCCAGC 2 cut(s) 1325, 2170
GsuI CTGGAG 1 cut(s) 1884
HaeIII GGCC 4 cut(s) 120, 875, 1720, 2024
HhaI GCGC 4 cut(s) 158, 160, 1321, 2807
Hin6I GCGC 4 cut(s) 156, 158, 1319, 2805
HinP1I GCGC 4 cut(s) 156, 158, 1319, 2805
HincII GTYRAC 4 cut(s) 464, 694, 916, 1731
HindII GTYRAC 4 cut(s) 464, 694, 916, 1731
HindIII AAGCTT 3 cut(s) 1394, 1586, 2786
HpaI GTTAAC 3 cut(s) 694, 916, 1731
HphI GGTGA 5 cut(s) 1907, 2021, 2186, 2335, 2417
Hpy166II GTNNAC 8 cut(s) 101, 464, 655, 694, 916, 1731, 1970, 2156
Hpy188I TCNGA 8 cut(s) 477, 645, 860, 890, 1228, 1504, 2361, 2562
Hpy8I GTNNAC 8 cut(s) 101, 464, 655, 694, 916, 1731, 1970, 2156
HpyAV CCTTC 9 cut(s) 131, 209, 387, 714, 758, 765, 968, 2100, 2396
HpyCH4III ACNGT 2 cut(s) 965, 1421
HpyCH4IV ACGT 2 cut(s) 1889, 2240
HpyF10VI GCNNNNNNNGC 5 cut(s) 258, 426, 1025, 1494, 1765
HpySE526I ACGT 2 cut(s) 1889, 2240
HspAI GCGC 4 cut(s) 156, 158, 1319, 2805
KpnI GGTACC 1 cut(s) 1385
Ksp22I TGATCA 1 cut(s) 1033
KspAI GTTAAC 3 cut(s) 694, 916, 1731
LmnI GCTCC 3 cut(s) 310, 671, 1155
Lsp1109I GCAGC 1 cut(s) 2121
LweI GCATC 6 cut(s) 147, 178, 307, 722, 1506, 1777
MaeII ACGT 2 cut(s) 1889, 2240
MaeIII GTNAC 8 cut(s) 404, 533, 569, 717, 1092, 1618, 1895, 2323
MbiI CCGCTC 1 cut(s) 2619
MfeI CAATTG 3 cut(s) 126, 1598, 2171
MflI RGATCY 6 cut(s) 178, 1196, 1294, 2203, 2380, 2901
MhlI GDGCHC 3 cut(s) 422, 2723, 2814
MlsI TGGCCA 1 cut(s) 875
MluNI TGGCCA 1 cut(s) 875
MlyI GAGTC 5 cut(s) 359, 1100, 1215, 1615, 2350
MmeI TCCRAC 2 cut(s) 1068, 1897
Mox20I TGGCCA 1 cut(s) 875
Mph1103I ATGCAT 1 cut(s) 140
MroXI GAANNNNTTC 2 cut(s) 747, 884
MscI TGGCCA 1 cut(s) 875
MslI CAYNNNNRTG 4 cut(s) 1773, 2304, 2472, 2775
Msp20I TGGCCA 1 cut(s) 875
MspR9I CCNGG 3 cut(s) 329, 920, 2724
MunI CAATTG 3 cut(s) 126, 1598, 2171
MvaI CCWGG 3 cut(s) 329, 920, 2724
MvnI CGCG 1 cut(s) 158
MwoI GCNNNNNNNGC 5 cut(s) 258, 426, 1025, 1494, 1765
NheI GCTAGC 1 cut(s) 1700
NlaIV GGNNCC 5 cut(s) 673, 895, 1198, 1383, 2903
NmeAIII GCCGAG 1 cut(s) 2793
NmuCI GTSAC 4 cut(s) 1092, 1618, 1895, 2323
NsiI ATGCAT 1 cut(s) 140
NspI RCATGY 3 cut(s) 689, 700, 1822
PagI TCATGA 1 cut(s) 1372
PauI GCGCGC 1 cut(s) 156
PciI ACATGT 1 cut(s) 685
PcsI WCGNNNNNNNCGW 2 cut(s) 1524, 2820
PdmI GAANNNNTTC 2 cut(s) 747, 884
PfeI GAWTC 6 cut(s) 517, 923, 1505, 1798, 2464, 2660
PflMI CCANNNNNTGG 1 cut(s) 1555
PkrI GCNGC 1 cut(s) 2136
PleI GAGTC 5 cut(s) 358, 1099, 1215, 1615, 2350
PpsI GAGTC 5 cut(s) 358, 1099, 1215, 1615, 2350
Ppu21I YACGTR 1 cut(s) 1890
PpuMI RGGWCCY 2 cut(s) 893, 1430
PscI ACATGT 1 cut(s) 685
Psp124BI GAGCTC 1 cut(s) 422
Psp5II RGGWCCY 2 cut(s) 893, 1430
Psp6I CCWGG 3 cut(s) 327, 918, 2722
PspEI GGTNACC 2 cut(s) 533, 2323
PspFI CCCAGC 2 cut(s) 1321, 2166
PspGI CCWGG 3 cut(s) 327, 918, 2722
PspN4I GGNNCC 5 cut(s) 673, 895, 1198, 1383, 2903
PspPI GGNCC 4 cut(s) 283, 893, 1430, 1718
PspPPI RGGWCCY 2 cut(s) 893, 1430
PsrI GAACNNNNNNTAC 2 cut(s) 1951, 1983
PstI CTGCAG 1 cut(s) 2429
PsuI RGATCY 6 cut(s) 178, 1196, 1294, 2203, 2380, 2901
PteI GCGCGC 1 cut(s) 156
RsaI GTAC 4 cut(s) 1166, 1383, 1888, 2230
RsaNI GTAC 4 cut(s) 1165, 1382, 1887, 2229
RseI CAYNNNNRTG 4 cut(s) 1773, 2304, 2472, 2775
SacI GAGCTC 1 cut(s) 422
SatI GCNGC 1 cut(s) 2135
Sau96I GGNCC 4 cut(s) 283, 893, 1430, 1718
SchI GAGTC 5 cut(s) 359, 1100, 1215, 1615, 2350
ScrFI CCNGG 3 cut(s) 329, 920, 2724
SduI GDGCHC 3 cut(s) 422, 2723, 2814
SfaNI GCATC 6 cut(s) 147, 178, 307, 722, 1506, 1777
SfcI CTRYAG 1 cut(s) 2425
SinI GGWCC 3 cut(s) 283, 893, 1430
SmiMI CAYNNNNRTG 4 cut(s) 1773, 2304, 2472, 2775
SmlI CTYRAG 2 cut(s) 415, 1875
SmoI CTYRAG 2 cut(s) 415, 1875
SpeI ACTAGT 2 cut(s) 95, 1468
SsiI CCGC 8 cut(s) 259, 289, 1019, 1346, 1661, 2506, 2619, 2918
SspI AATATT 4 cut(s) 46, 1942, 2482, 2671
SstI GAGCTC 1 cut(s) 422
StyD4I CCNGG 3 cut(s) 327, 918, 2722
StyI CCWWGG 2 cut(s) 2025, 2115
TaaI ACNGT 2 cut(s) 965, 1421
TaiI ACGT 2 cut(s) 1892, 2243
TaqI TCGA 9 cut(s) 141, 186, 422, 967, 1179, 1985, 2459, 2514, 2663
TfiI GAWTC 6 cut(s) 517, 923, 1505, 1798, 2464, 2660
TscAI CASTG 3 cut(s) 268, 571, 2814
TseFI GTSAC 4 cut(s) 1092, 1618, 1895, 2323
TseI GCWGC 1 cut(s) 2134
Tsp45I GTSAC 4 cut(s) 1092, 1618, 1895, 2323
TspGWI ACGGA 1 cut(s) 1716
TspRI CASTG 3 cut(s) 268, 571, 2814
Van91I CCANNNNNTGG 1 cut(s) 1555
VpaK11BI GGWCC 3 cut(s) 283, 893, 1430
XbaI TCTAGA 3 cut(s) 728, 1240, 1624
XceI RCATGY 3 cut(s) 689, 700, 1822
XcmI CCANNNNNNNNNTGG 1 cut(s) 831
XmnI GAANNNNTTC 2 cut(s) 747, 884
Zsp2I ATGCAT 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.