Protein RETICULATA-related
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12470 |
| fragaria_vesca | FvH4_3g28550 FvH4_3g28550 FvH4_3g28550 FvH4_7g01660 FvH4_7g01660 |
| malus_domestica | MD02G1301900.v1.1 MD03G1172700.v1.1 MD07G1022100.v1.1 MD07G1022200.v1.1 MD11G1190600.v1.1 |
| prunus_persica | Prupe.2G022300_v2.0.a1 Prupe.4G253900_v2.0.a1 |
| pyrus_communis | pycom02g25410 pycom03g12990 pycom07g01680 pycom11g16650 |
| rosa_chinensis | RchiOBHm_Chr1g0317941 RchiOBHm_Chr5g0052771 |
| rosa_laevigata | RLG00000030572 RLG00000034800 |
| rosa_multiflora | Rmu_co8100628.1_g000001 Rmu_co8460597.1_g000001 Rmu_sc0010119.1_g000003 Rmu_sc0011424.1_g000037 Rmu_sc0014026.1_g000003 Rmu_ssc0000008.1_g000032 |
| rosa_roxburghii | Rroxscaffold_1G00028580 Rroxscaffold_4G00330080 |
| rosa_rugosa | Rorug01G0018600 Rorug01G0018700 Rorug05G0270000 |
| rosa_samantha | Rh1AG030400 Rh1BG026800 Rh1CG029100 Rh1DG041100 Rh5AG342000 Rh5BG352600 Rh5CG379300 Rh5DG369000 |
| rosa_wichuraiana | Rw0G017390 Rw1G002300 Rw5G032240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 413, 617 |
| AatII | GACGTC | 1 cut(s) | 2574 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1013 |
| AccBSI | CCGCTC | 2 cut(s) | 477, 731 |
| AccI | GTMKAC | 2 cut(s) | 1288, 2438 |
| AccII | CGCG | 4 cut(s) | 174, 425, 432, 805 |
| AcoI | YGGCCR | 3 cut(s) | 573, 1493, 2344 |
| AcsI | RAATTY | 4 cut(s) | 1226, 1916, 1941, 2671 |
| AcuI | CTGAAG | 3 cut(s) | 1110, 1205, 1806 |
| AcyI | GRCGYC | 4 cut(s) | 267, 402, 414, 2571 |
| AfaI | GTAC | 3 cut(s) | 461, 1156, 2667 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 121, 233, 417, 685, 1013, 2034, 2102, 2353 |
| AflIII | ACRYGT | 3 cut(s) | 423, 803, 2022 |
| AgsI | TTSAA | 9 cut(s) | 84, 466, 1065, 1244, 1305, 1408, 2399, 2505, 2603 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2627 |
| AjnI | CCWGG | 3 cut(s) | 644, 678, 2759 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2353, 2385 |
| Alw21I | GWGCWC | 2 cut(s) | 249, 828 |
| Alw26I | GTCTC | 5 cut(s) | 309, 723, 785, 1681, 1740 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 651, 818, 887, 1133, 2486 |
| Ama87I | CYCGRG | 3 cut(s) | 203, 782, 1522 |
| AoxI | GGCC | 7 cut(s) | 235, 573, 1493, 1774, 2002, 2195, 2344 |
| ApaI | GGGCCC | 1 cut(s) | 2006 |
| ApoI | RAATTY | 4 cut(s) | 1226, 1916, 1941, 2671 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 276, 308, 1343, 1375, 1613, 1645 |
| AseI | ATTAAT | 1 cut(s) | 1563 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1392, 1981, 2250 |
| AspLEI | GCGC | 2 cut(s) | 448, 457 |
| AsuC2I | CCSGG | 1 cut(s) | 419 |
| AsuHPI | GGTGA | 7 cut(s) | 64, 139, 340, 1943, 2103, 2201, 2417 |
| AvaI | CYCGRG | 3 cut(s) | 203, 782, 1522 |
| AvaII | GGWCC | 7 cut(s) | 14, 87, 610, 2093, 2276, 2483, 2621 |
| AxyI | CCTNAGG | 1 cut(s) | 2706 |
| BaeGI | GKGCMC | 1 cut(s) | 2006 |
| BalI | TGGCCA | 2 cut(s) | 1495, 2346 |
| BamHI | GGATCC | 4 cut(s) | 141, 1625, 2356, 2698 |
| BanII | GRGCYC | 1 cut(s) | 2006 |
| BbsI | GAAGAC | 1 cut(s) | 1800 |
| Bbv12I | GWGCWC | 2 cut(s) | 249, 828 |
| BbvCI | CCTCAGC | 1 cut(s) | 1032 |
| BccI | CCATC | 7 cut(s) | 85, 1015, 1604, 1843, 1967, 2096, 2287 |
| BceAI | ACGGC | 5 cut(s) | 176, 250, 275, 508, 560 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 828, 862 |
| BciT130I | CCWGG | 3 cut(s) | 646, 680, 2761 |
| BciVI | GTATCC | 1 cut(s) | 2407 |
| BclI | TGATCA | 4 cut(s) | 858, 2134, 2449, 2731 |
| BcnI | CCSGG | 1 cut(s) | 419 |
| BcoDI | GTCTC | 5 cut(s) | 309, 723, 785, 1681, 1740 |
| BfaI | CTAG | 4 cut(s) | 836, 1071, 1877, 2061 |
| BfmI | CTRYAG | 6 cut(s) | 1266, 1715, 2316, 2439, 2688, 2744 |
| BfoI | RGCGCY | 1 cut(s) | 449 |
| BfuI | GTATCC | 1 cut(s) | 2407 |
| BglII | AGATCT | 2 cut(s) | 199, 2015 |
| BmcAI | AGTACT | 3 cut(s) | 461, 1156, 2667 |
| Bme1390I | CCNGG | 4 cut(s) | 419, 646, 680, 2761 |
| Bme18I | GGWCC | 7 cut(s) | 14, 87, 610, 2093, 2276, 2483, 2621 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2627 |
| BmeT110I | CYCGRG | 3 cut(s) | 203, 782, 1522 |
| BmrFI | CCNGG | 4 cut(s) | 419, 646, 680, 2761 |
| BmrI | ACTGGG | 1 cut(s) | 2722 |
| BmsI | GCATC | 4 cut(s) | 1112, 2231, 2380, 2762 |
| BmuI | ACTGGG | 1 cut(s) | 2722 |
| BoxI | GACNNNNGTC | 1 cut(s) | 426 |
| BpiI | GAAGAC | 1 cut(s) | 1800 |
| BpmI | CTGGAG | 2 cut(s) | 1703, 2283 |
| Bpu10I | CCTNAGC | 2 cut(s) | 684, 1032 |
| BpuEI | CTTGAG | 5 cut(s) | 116, 380, 914, 1294, 1799 |
| BpuMI | CCSGG | 1 cut(s) | 419 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1563, 2355 |
| BsaHI | GRCGYC | 4 cut(s) | 267, 402, 414, 2571 |
| BsaI | GGTCTC | 1 cut(s) | 1740 |
| BsaJI | CCNNGG | 9 cut(s) | 120, 644, 702, 2028, 2097, 2241, 2520, 2632, 2760 |
| BsaWI | WCCGGW | 1 cut(s) | 566 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 254, 284, 392, 422, 1822, 1852 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 121, 233, 417, 685, 1013, 2034, 2102, 2353 |
| Bse118I | RCCGGY | 1 cut(s) | 903 |
| Bse1I | ACTGG | 1 cut(s) | 2717 |
| Bse21I | CCTNAGG | 1 cut(s) | 2706 |
| Bse3DI | GCAATG | 6 cut(s) | 320, 828, 839, 2391, 2700, 2730 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1563, 2355 |
| BseBI | CCWGG | 3 cut(s) | 646, 680, 2761 |
| BseDI | CCNNGG | 9 cut(s) | 120, 644, 702, 2028, 2097, 2241, 2520, 2632, 2760 |
| BseGI | GGATG | 5 cut(s) | 1546, 1577, 2107, 2395, 2753 |
| BseJI | GATNNNNATC | 2 cut(s) | 1563, 2355 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 121, 233, 417, 685, 1013, 2034, 2102, 2353 |
| BseMI | GCAATG | 6 cut(s) | 320, 828, 839, 2391, 2700, 2730 |
| BseMII | CTCAG | 4 cut(s) | 734, 1023, 2194, 2697 |
| BseNI | ACTGG | 1 cut(s) | 2717 |
| BseRI | GAGGAG | 5 cut(s) | 97, 239, 305, 319, 322 |
| BseSI | GKGCMC | 1 cut(s) | 2006 |
| BseX3I | CGGCCG | 1 cut(s) | 573 |
| BsgI | GTGCAG | 1 cut(s) | 1611 |
| Bsh1236I | CGCG | 4 cut(s) | 174, 425, 432, 805 |
| Bsh1285I | CGRYCG | 2 cut(s) | 172, 576 |
| BshFI | GGCC | 7 cut(s) | 237, 575, 1495, 1776, 2004, 2197, 2346 |
| BsiEI | CGRYCG | 2 cut(s) | 172, 576 |
| BsiHKAI | GWGCWC | 2 cut(s) | 249, 828 |
| BsiHKCI | CYCGRG | 3 cut(s) | 203, 782, 1522 |
| BsiSI | CCGG | 4 cut(s) | 411, 418, 567, 904 |
| BslFI | GGGAC | 5 cut(s) | 434, 605, 627, 1950, 2079 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 121, 233, 417, 685, 1013, 2034, 2102, 2353 |
| BsmAI | GTCTC | 5 cut(s) | 309, 723, 785, 1681, 1740 |
| BsmFI | GGGAC | 5 cut(s) | 434, 605, 627, 1950, 2079 |
| BsmI | GAATGC | 2 cut(s) | 844, 2637 |
| BsnI | GGCC | 7 cut(s) | 237, 575, 1495, 1776, 2004, 2197, 2346 |
| Bso31I | GGTCTC | 1 cut(s) | 1740 |
| BsoBI | CYCGRG | 3 cut(s) | 203, 782, 1522 |
| Bsp120I | GGGCCC | 1 cut(s) | 2002 |
| Bsp1286I | GDGCHC | 3 cut(s) | 249, 828, 2006 |
| Bsp19I | CCATGG | 2 cut(s) | 120, 2097 |
| Bsp68I | TCGCGA | 1 cut(s) | 432 |
| BspANI | GGCC | 7 cut(s) | 237, 575, 1495, 1776, 2004, 2197, 2346 |
| BspCNI | CTCAG | 4 cut(s) | 733, 1024, 2193, 2698 |
| BspFNI | CGCG | 4 cut(s) | 174, 425, 432, 805 |
| BspHI | TCATGA | 3 cut(s) | 772, 1468, 1738 |
| BspMAI | CTGCAG | 3 cut(s) | 1719, 2320, 2748 |
| BspTNI | GGTCTC | 1 cut(s) | 1740 |
| BsrBI | CCGCTC | 2 cut(s) | 477, 731 |
| BsrDI | GCAATG | 6 cut(s) | 320, 828, 839, 2391, 2700, 2730 |
| BsrFI | RCCGGY | 1 cut(s) | 903 |
| BsrI | ACTGG | 1 cut(s) | 2717 |
| BssAI | RCCGGY | 1 cut(s) | 903 |
| BssECI | CCNNGG | 9 cut(s) | 120, 644, 702, 2028, 2097, 2241, 2520, 2632, 2760 |
| BssNI | GRCGYC | 4 cut(s) | 267, 402, 414, 2571 |
| BssT1I | CCWWGG | 3 cut(s) | 120, 2097, 2241 |
| Bst2UI | CCWGG | 3 cut(s) | 646, 680, 2761 |
| Bst4CI | ACNGT | 6 cut(s) | 769, 779, 883, 889, 1421, 2544 |
| Bst6I | CTCTTC | 2 cut(s) | 97, 1918 |
| BstACI | GRCGYC | 4 cut(s) | 267, 402, 414, 2571 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1100, 2390 |
| BstC8I | GCNNGC | 6 cut(s) | 450, 1712, 2150, 2154, 2220, 2532 |
| BstDEI | CTNAG | 6 cut(s) | 588, 684, 720, 1032, 2180, 2706 |
| BstDSI | CCRYGG | 3 cut(s) | 120, 702, 2097 |
| BstEII | GGTNACC | 1 cut(s) | 2109 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 683 |
| BstF5I | GGATG | 5 cut(s) | 1546, 1577, 2107, 2395, 2753 |
| BstFNI | CGCG | 4 cut(s) | 174, 425, 432, 805 |
| BstH2I | RGCGCY | 1 cut(s) | 449 |
| BstHHI | GCGC | 2 cut(s) | 448, 457 |
| BstMAI | GTCTC | 5 cut(s) | 309, 723, 785, 1681, 1740 |
| BstMCI | CGRYCG | 2 cut(s) | 172, 576 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 452, 454, 1100, 2297, 2390, 2690 |
| BstNI | CCWGG | 3 cut(s) | 646, 680, 2761 |
| BstNSI | RCATGY | 4 cut(s) | 1714, 2026, 2534, 2786 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 426 |
| BstPI | GGTNACC | 1 cut(s) | 2109 |
| BstSCI | CCNGG | 4 cut(s) | 417, 644, 678, 2759 |
| BstSFI | CTRYAG | 6 cut(s) | 1266, 1715, 2316, 2439, 2688, 2744 |
| BstSLI | GKGCMC | 1 cut(s) | 2006 |
| BstUI | CGCG | 4 cut(s) | 174, 425, 432, 805 |
| BstV2I | GAAGAC | 1 cut(s) | 1800 |
| BstX2I | RGATCY | 9 cut(s) | 141, 199, 648, 1400, 1625, 1862, 2015, 2356, 2698 |
| BstYI | RGATCY | 9 cut(s) | 141, 199, 648, 1400, 1625, 1862, 2015, 2356, 2698 |
| BstZI | CGGCCG | 1 cut(s) | 573 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2706 |
| BsuI | GTATCC | 1 cut(s) | 2407 |
| BsuRI | GGCC | 7 cut(s) | 237, 575, 1495, 1776, 2004, 2197, 2346 |
| BtgI | CCRYGG | 3 cut(s) | 120, 702, 2097 |
| BtgZI | GCGATG | 1 cut(s) | 1862 |
| BtsCI | GGATG | 5 cut(s) | 1546, 1577, 2107, 2395, 2753 |
| BtsI | GCAGTG | 1 cut(s) | 1542 |
| BtsIMutI | CAGTG | 2 cut(s) | 885, 1542 |
| BtuMI | TCGCGA | 1 cut(s) | 432 |
| Cac8I | GCNNGC | 6 cut(s) | 450, 1712, 2150, 2154, 2220, 2532 |
| CaiI | CAGNNNCTG | 5 cut(s) | 651, 818, 887, 1133, 2486 |
| CciI | TCATGA | 3 cut(s) | 772, 1468, 1738 |
| CfoI | GCGC | 2 cut(s) | 448, 457 |
| Cfr10I | RCCGGY | 1 cut(s) | 903 |
| CseI | GACGC | 4 cut(s) | 275, 403, 410, 431 |
| Csp6I | GTAC | 3 cut(s) | 460, 1155, 2666 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2238, 2273 |
| CviQI | GTAC | 3 cut(s) | 460, 1155, 2666 |
| DdeI | CTNAG | 6 cut(s) | 588, 684, 720, 1032, 2180, 2706 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 413, 617 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2627 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 413, 617 |
| EaeI | YGGCCR | 3 cut(s) | 573, 1493, 2344 |
| EagI | CGGCCG | 1 cut(s) | 573 |
| Eam1104I | CTCTTC | 2 cut(s) | 97, 1918 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2627 |
| EarI | CTCTTC | 2 cut(s) | 97, 1918 |
| EciI | GGCGGA | 1 cut(s) | 262 |
| EclXI | CGGCCG | 1 cut(s) | 573 |
| Eco130I | CCWWGG | 3 cut(s) | 120, 2097, 2241 |
| Eco24I | GRGCYC | 1 cut(s) | 2006 |
| Eco31I | GGTCTC | 1 cut(s) | 1740 |
| Eco47I | GGWCC | 7 cut(s) | 14, 87, 610, 2093, 2276, 2483, 2621 |
| Eco52I | CGGCCG | 1 cut(s) | 573 |
| Eco57I | CTGAAG | 3 cut(s) | 1110, 1205, 1806 |
| Eco81I | CCTNAGG | 1 cut(s) | 2706 |
| Eco88I | CYCGRG | 3 cut(s) | 203, 782, 1522 |
| Eco91I | GGTNACC | 1 cut(s) | 2109 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 683 |
| EcoO109I | RGGNCCY | 7 cut(s) | 14, 87, 1774, 2002, 2003, 2195, 2483 |
| EcoO65I | GGTNACC | 1 cut(s) | 2109 |
| EcoRI | GAATTC | 2 cut(s) | 1226, 1941 |
| EcoRII | CCWGG | 3 cut(s) | 644, 678, 2759 |
| EcoT14I | CCWWGG | 3 cut(s) | 120, 2097, 2241 |
| EcoT38I | GRGCYC | 1 cut(s) | 2006 |
| ErhI | CCWWGG | 3 cut(s) | 120, 2097, 2241 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 76, 108, 1990, 2022 |
| FaqI | GGGAC | 5 cut(s) | 434, 605, 627, 1950, 2079 |
| FauI | CCCGC | 5 cut(s) | 235, 295, 964, 1724, 2145 |
| FauNDI | CATATG | 1 cut(s) | 2050 |
| FbaI | TGATCA | 4 cut(s) | 858, 2134, 2449, 2731 |
| FblI | GTMKAC | 2 cut(s) | 1288, 2438 |
| FokI | GGATG | 5 cut(s) | 1553, 1564, 2114, 2402, 2740 |
| FriOI | GRGCYC | 1 cut(s) | 2006 |
| FspBI | CTAG | 4 cut(s) | 836, 1071, 1877, 2061 |
| GlaI | GCGC | 2 cut(s) | 447, 456 |
| GsuI | CTGGAG | 2 cut(s) | 1703, 2283 |
| HaeII | RGCGCY | 1 cut(s) | 449 |
| HaeIII | GGCC | 7 cut(s) | 237, 575, 1495, 1776, 2004, 2197, 2346 |
| HapII | CCGG | 4 cut(s) | 411, 418, 567, 904 |
| HgaI | GACGC | 4 cut(s) | 275, 403, 410, 431 |
| HhaI | GCGC | 2 cut(s) | 448, 457 |
| Hin1I | GRCGYC | 4 cut(s) | 267, 402, 414, 2571 |
| Hin6I | GCGC | 2 cut(s) | 446, 455 |
| HinP1I | GCGC | 2 cut(s) | 446, 455 |
| HindIII | AAGCTT | 2 cut(s) | 745, 2682 |
| HpaII | CCGG | 4 cut(s) | 411, 418, 567, 904 |
| HphI | GGTGA | 7 cut(s) | 64, 139, 340, 1943, 2103, 2201, 2417 |
| Hpy166II | GTNNAC | 4 cut(s) | 598, 1289, 2174, 2439 |
| Hpy8I | GTNNAC | 4 cut(s) | 598, 1289, 2174, 2439 |
| Hpy99I | CGWCG | 3 cut(s) | 197, 236, 269 |
| HpyAV | CCTTC | 7 cut(s) | 460, 1639, 1992, 2016, 2071, 2208, 2650 |
| HpyCH4III | ACNGT | 6 cut(s) | 769, 779, 883, 889, 1421, 2544 |
| HpyCH4IV | ACGT | 1 cut(s) | 2571 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 452, 454, 1100, 2297, 2390, 2690 |
| HpyF3I | CTNAG | 6 cut(s) | 588, 684, 720, 1032, 2180, 2706 |
| HpySE526I | ACGT | 1 cut(s) | 2571 |
| Hsp92I | GRCGYC | 4 cut(s) | 267, 402, 414, 2571 |
| HspAI | GCGC | 2 cut(s) | 446, 455 |
| Ksp22I | TGATCA | 4 cut(s) | 858, 2134, 2449, 2731 |
| LmnI | GCTCC | 3 cut(s) | 252, 544, 728 |
| LweI | GCATC | 4 cut(s) | 1112, 2231, 2380, 2762 |
| MaeI | CTAG | 4 cut(s) | 836, 1071, 1877, 2061 |
| MaeII | ACGT | 1 cut(s) | 2571 |
| MaeIII | GTNAC | 4 cut(s) | 851, 883, 1674, 2109 |
| MbiI | CCGCTC | 2 cut(s) | 477, 731 |
| MflI | RGATCY | 9 cut(s) | 141, 199, 648, 1400, 1625, 1862, 2015, 2356, 2698 |
| MhlI | GDGCHC | 3 cut(s) | 249, 828, 2006 |
| MlsI | TGGCCA | 2 cut(s) | 1495, 2346 |
| MluI | ACGCGT | 2 cut(s) | 423, 803 |
| MluNI | TGGCCA | 2 cut(s) | 1495, 2346 |
| MmeI | TCCRAC | 5 cut(s) | 192, 706, 1156, 2100, 2518 |
| Mox20I | TGGCCA | 2 cut(s) | 1495, 2346 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1392, 1981, 2250 |
| MscI | TGGCCA | 2 cut(s) | 1495, 2346 |
| MseI | TTAA | 2 cut(s) | 663, 1563 |
| Msp20I | TGGCCA | 2 cut(s) | 1495, 2346 |
| MspA1I | CMGCKG | 3 cut(s) | 818, 1031, 1681 |
| MspI | CCGG | 4 cut(s) | 411, 418, 567, 904 |
| MspR9I | CCNGG | 4 cut(s) | 419, 646, 680, 2761 |
| Mva1269I | GAATGC | 2 cut(s) | 844, 2637 |
| MvaI | CCWGG | 3 cut(s) | 646, 680, 2761 |
| MvnI | CGCG | 4 cut(s) | 174, 425, 432, 805 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 452, 454, 1100, 2297, 2390, 2690 |
| NciI | CCSGG | 1 cut(s) | 419 |
| NcoI | CCATGG | 2 cut(s) | 120, 2097 |
| NdeI | CATATG | 1 cut(s) | 2050 |
| NmeAIII | GCCGAG | 2 cut(s) | 581, 2613 |
| NmuCI | GTSAC | 2 cut(s) | 883, 2109 |
| NruI | TCGCGA | 1 cut(s) | 432 |
| NspI | RCATGY | 4 cut(s) | 1714, 2026, 2534, 2786 |
| PaeI | GCATGC | 2 cut(s) | 1714, 2534 |
| PaeR7I | CTCGAG | 2 cut(s) | 203, 1522 |
| PagI | TCATGA | 3 cut(s) | 772, 1468, 1738 |
| PciI | ACATGT | 1 cut(s) | 2022 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 201, 240, 273, 429 |
| PctI | GAATGC | 2 cut(s) | 844, 2637 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1392, 1981, 2250 |
| PfeI | GAWTC | 5 cut(s) | 21, 1025, 1130, 2587, 2766 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1013 |
| PfoI | TCCNGGA | 1 cut(s) | 417 |
| PpuMI | RGGWCCY | 3 cut(s) | 14, 87, 2483 |
| PscI | ACATGT | 1 cut(s) | 2022 |
| PshAI | GACNNNNGTC | 1 cut(s) | 426 |
| PshBI | ATTAAT | 1 cut(s) | 1563 |
| Psp5II | RGGWCCY | 3 cut(s) | 14, 87, 2483 |
| Psp6I | CCWGG | 3 cut(s) | 644, 678, 2759 |
| PspEI | GGTNACC | 1 cut(s) | 2109 |
| PspGI | CCWGG | 3 cut(s) | 644, 678, 2759 |
| PspOMI | GGGCCC | 1 cut(s) | 2002 |
| PspPPI | RGGWCCY | 3 cut(s) | 14, 87, 2483 |
| PstI | CTGCAG | 3 cut(s) | 1719, 2320, 2748 |
| PstNI | CAGNNNCTG | 5 cut(s) | 651, 818, 887, 1133, 2486 |
| PsuI | RGATCY | 9 cut(s) | 141, 199, 648, 1400, 1625, 1862, 2015, 2356, 2698 |
| PvuII | CAGCTG | 3 cut(s) | 818, 1031, 1681 |
| RruI | TCGCGA | 1 cut(s) | 432 |
| RsaI | GTAC | 3 cut(s) | 461, 1156, 2667 |
| RsaNI | GTAC | 3 cut(s) | 460, 1155, 2666 |
| SaqAI | TTAA | 2 cut(s) | 663, 1563 |
| ScaI | AGTACT | 3 cut(s) | 461, 1156, 2667 |
| ScrFI | CCNGG | 4 cut(s) | 419, 646, 680, 2761 |
| SduI | GDGCHC | 3 cut(s) | 249, 828, 2006 |
| SfaNI | GCATC | 4 cut(s) | 1112, 2231, 2380, 2762 |
| SfcI | CTRYAG | 6 cut(s) | 1266, 1715, 2316, 2439, 2688, 2744 |
| Sfr274I | CTCGAG | 2 cut(s) | 203, 1522 |
| SinI | GGWCC | 7 cut(s) | 14, 87, 610, 2093, 2276, 2483, 2621 |
| SlaI | CTCGAG | 2 cut(s) | 203, 1522 |
| SmlI | CTYRAG | 7 cut(s) | 131, 203, 395, 893, 1309, 1522, 1778 |
| SmoI | CTYRAG | 7 cut(s) | 131, 203, 395, 893, 1309, 1522, 1778 |
| SphI | GCATGC | 2 cut(s) | 1714, 2534 |
| SspI | AATATT | 1 cut(s) | 1426 |
| SspMI | CTAG | 4 cut(s) | 836, 1071, 1877, 2061 |
| StyD4I | CCNGG | 4 cut(s) | 417, 644, 678, 2759 |
| StyI | CCWWGG | 3 cut(s) | 120, 2097, 2241 |
| TaaI | ACNGT | 6 cut(s) | 769, 779, 883, 889, 1421, 2544 |
| TaiI | ACGT | 1 cut(s) | 2574 |
| TaqI | TCGA | 6 cut(s) | 195, 204, 848, 1523, 1870, 2225 |
| TatI | WGTACW | 3 cut(s) | 459, 1154, 2665 |
| TauI | GCSGC | 4 cut(s) | 455, 480, 483, 575 |
| TfiI | GAWTC | 5 cut(s) | 21, 1025, 1130, 2587, 2766 |
| Tru1I | TTAA | 2 cut(s) | 663, 1563 |
| Tru9I | TTAA | 2 cut(s) | 663, 1563 |
| TscAI | CASTG | 2 cut(s) | 892, 1542 |
| TseFI | GTSAC | 2 cut(s) | 883, 2109 |
| Tsp45I | GTSAC | 2 cut(s) | 883, 2109 |
| TspDTI | ATGAA | 7 cut(s) | 761, 1523, 1714, 2247, 2523, 2661, 2694 |
| TspGWI | ACGGA | 3 cut(s) | 1527, 1638, 1935 |
| TspRI | CASTG | 2 cut(s) | 892, 1542 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1013 |
| VpaK11BI | GGWCC | 7 cut(s) | 14, 87, 610, 2093, 2276, 2483, 2621 |
| VspI | ATTAAT | 1 cut(s) | 1563 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 683 |
| XapI | RAATTY | 4 cut(s) | 1226, 1916, 1941, 2671 |
| XbaI | TCTAGA | 1 cut(s) | 2060 |
| XceI | RCATGY | 4 cut(s) | 1714, 2026, 2534, 2786 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 445, 1753, 2709 |
| XhoI | CTCGAG | 2 cut(s) | 203, 1522 |
| XmiI | GTMKAC | 2 cut(s) | 1288, 2438 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1392, 1981, 2250 |
| XspI | CTAG | 4 cut(s) | 836, 1071, 1877, 2061 |
| ZraI | GACGTC | 1 cut(s) | 2572 |
| ZrmI | AGTACT | 3 cut(s) | 461, 1156, 2667 |