Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000922

Physical Location & Seq

Genomic Coordinates Forward (+)

2891019 .. 2895182

Gene Structure 4164 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G09000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGCAAGATTTCTTCGGCTCCGTTCGTCGATCGCTTGTTTTCCGTCCTTCTTCCGACGACGATAACCAGGAGAACCAGCCTCCGTTTCCCGGTGTTCTCGCCGATAAGATCACCTCTTGCATCCGCAAATCGAAGATTTTTATCAAACCCTCCTTCTCGCCTCCTCCTCCTGCTAACACTGTAGACATGGCACCTCCGATTTCGTGGAGGAAAGGTCAGTTAATTGGTCGCGGCGCGTTTGGTACGGTGTACATGGGTATGAATCTTGACTCCGGGGAGCTTCTCGCCGTCAAACAGGTTCTGATTGCAGCCAATTTTGCTTCCAAGGAAAAGACTCAGGCTCATATTCAGGAGCTTGAAGAAGAAGTTAAGCTTCTTAAAAATCTCTCCCATCCTAATATAGTTAGATATTTGGGTACAGTGAGGGAAGATGATACCCTGAATATCCTTCTCGAGTTTGTTCCCGGTGGATCGATATCATCGCTCTTGGAGAAATTTGGACCTTTTCCTGAATCAGTTGTCCGGACATACACAAGGCAACTGCTTTTAGGGTTGGAGTACCTGCACAATCATGCAATTATGCACAGAGACATTAAGGGGGCTAATATCCTTGTGGATAATAAAGGATGCATTAAGCTTGCTGATTTTGGTGCATCCAAACAAGTAGCTGAGTTGGCTACGATGACTGGTGCAAAATCTATGAAAGGGACACCATATTGGATGGCTCCGGAAGTTATTCTTCAAACTGGACATAGCTTCTCTGCTGACATATGGAGCGTCGGCTGTACAGTTATTGAAATGGTGACTGGGAAGGCTCCTTGGAGTCAGCAGTATAAAGAGGTTGCTGCTATCTTCTTCATAGGAACAACAAAATCACATCCTCCAATACCTGATACTCTCTCCTCTGATGCAAAAGATTTTCTGCTCAAGTGTCTGCAGGAGGTACCAAATCTGCGGCCAACCGCATCTGAGCTACTAAAGCATCCTTTTGTTATGGGGAAACACAAGGAGTCTGCTTCTACTGATCTTGGTTCTGTCCTGAACAATCTTAGCACTCCACTACCGTTACAGATAAATAACACCAAGAGCACTCCAGATTCTACTTGCGACGATGTAGGTGACATGTGTAACTTTGGCAGTTTGAATTATTCACTTGTAGATCCTGTGAAATCAATCCAAAACAAAAATTTATGGCAACAAAATGATAATGGAGGTGATGAAGACGATATGTGTTTGATAGATGATGAGAATTTCTTGACATTTGACGGAGAAATGAGTTCTACCCTTGAAAAAGATTGTCATCTGAAGAAGAGCTGTGATGACATAAGTGATATGTCCATTGCTTTGAAGTCCAAATTTGACGAAAGTCCTGGTAATGGAGAGAAAGAGTCTACAATGAGCATGGAATGTGACCAACCTTCATACTCAGAGGATGATGATGAGCTGACCGAGTCAAAAATTAAAGCTTTCTTAGATGAGAAGGCTGCAGATCTAAAGAAGTTACAGACTCCTCTCTATGAAGAATTCTACAATAGTTTGATCACATTCTCTCCCAGTTGTATGGAGAGTAATTTAAGTAACAGTAAAAGAGAGGACACTGCTCGTGGTTTCCTGAAACTGCCTCCAAAAAGCAGGTCACCGAGTCGGGGCCCTCTTGGTGGTTCACCTTCAAGAGCAACAGACGCAACTAGTTGTTCCAAGAGCCCAGGAAGTGGAGGTAGTCGTGAATTGAATATTAACAATGGAGGTGATGAAGCTTCACAGGATGGTGTATCAGCACGGGTCACAGACTGGAGGGGTCTCGTTGTTGACACTAAGCAGGAATTAAGCCAGTGTGTTGCTTTGTCAGAGATAGAGAAGAAGTGGAAGGAAGAGCTTGATCAAGAACTGGAAAGAAAGCGACAAGAAATCATGCGCCAAGCAGGGTTGGGATCATCCCCAAGAGACAGAGGCATGAGCCGACAGAGAGAGAAGTCGAGGTTTGCATCACCAGGAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0000186 GO:0000226 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048046 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0071900 GO:0071902 GO:0080090 GO:0097435 GO:0140096 GO:1901564 GO:1902531 GO:1902533

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

666

Amino Acids

73.47

Weight (kDa)

5.33

Isoelectric Point (pI)

52.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	70 - 331	5.1e-74	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	72 - 327	4e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000922)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09000 AT1G09000 AT1G54960 AT1G54960
fragaria_vesca	FvH4_2g08110 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14790 FvH4_4g12990 FvH4_4g34210 FvH4_6g05800 FvH4_6g05800
malus_domestica	MD04G1205500.v1.1 MD12G1219600.v1.1
prunus_persica	Prupe.6G326300_v2.0.a1 Prupe.6G326300_v2.0.a1 Prupe.6G326300_v2.0.a1
pyrus_communis	pycom04g18180 pycom12g20510
rosa_chinensis	RchiOBHm_Chr3g0454721 RchiOBHm_Chr5g0024321 RchiOBHm_Chr5g0024331 RchiOBHm_Chr5g0024401 RchiOBHm_Chr5g0025361
rosa_laevigata	RLG00000032792 RLG00000032796
rosa_multiflora	Rmu_co7974142.1_g000001 Rmu_co8231501.1_g000001 Rmu_co8476593.1_g000001 Rmu_sc0005861.1_g000005 Rmu_sc0014903.1_g000002 Rmu_sc0015218.1_g000003
rosa_roxburghii	Rroxscaffold_1G00054820 Rroxscaffold_1G00054830 Rroxscaffold_1G00055870 Rroxscaffold_6G00424830
rosa_rugosa	Rorug03G0001600 Rorug05G0083100
rosa_samantha	Rh3AG061400 Rh3AG061600 Rh3BG063200 Rh3BG063400 Rh3CG062100 Rh3CG062300 Rh3DG063100 Rh5AG173900 Rh5AG174200 Rh5BG171100 Rh5BG171800 Rh5CG187000 Rh5CG187100 Rh5CG187200 Rh5DG173300 Rh5DG245400
rosa_wichuraiana	Rw3G004800 Rw5G015780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	570, 1623
Acc65I	GGTACC	1 cut(s)	943
AccB1I	GGYRCC	2 cut(s)	190, 943
AccB7I	CCANNNNNTGG	1 cut(s)	1712
AccI	GTMKAC	2 cut(s)	183, 1391
AccII	CGCG	2 cut(s)	231, 236
AccIII	TCCGGA	2 cut(s)	522, 727
AciI	CCGC	4 cut(s)	124, 231, 955, 963
AclWI	GGATC	3 cut(s)	478, 1154, 1939
AcoI	YGGCCR	1 cut(s)	956
AcsI	RAATTY	5 cut(s)	494, 1186, 1249, 1355, 1523
AcuI	CTGAAG	1 cut(s)	1325
AfaI	GTAC	6 cut(s)	244, 251, 418, 560, 787, 945
AfiI	CCNNNNNNNGG	5 cut(s)	89, 1376, 1646, 1658, 1712
AflIII	ACRYGT	1 cut(s)	1122
AgsI	TTSAA	8 cut(s)	359, 743, 797, 1144, 1289, 1348, 1671, 1732
AhlI	ACTAGT	1 cut(s)	1688
AjnI	CCWGG	4 cut(s)	66, 1369, 1705, 1990
Alw21I	GWGCWC	1 cut(s)	1091
Alw26I	GTCTC	3 cut(s)	582, 1805, 1938
AlwI	GGATC	3 cut(s)	478, 1154, 1939
AlwNI	CAGNNNCTG	1 cut(s)	301
Ama87I	CYCGRG	1 cut(s)	452
Aor13HI	TCCGGA	2 cut(s)	522, 727
AoxI	GGCC	2 cut(s)	956, 1648
ApaI	GGGCCC	1 cut(s)	1652
ApeKI	GCWGC	3 cut(s)	308, 845, 1484
ApoI	RAATTY	5 cut(s)	494, 1186, 1249, 1355, 1523
ArsI	GACNNNNNNTTYG	2 cut(s)	1619, 1651
Asp700I	GAANNNNTTC	1 cut(s)	735
Asp718I	GGTACC	1 cut(s)	943
AspLEI	GCGC	2 cut(s)	236, 1917
AspS9I	GGNCC	3 cut(s)	500, 1648, 1649
AsuC2I	CCSGG	3 cut(s)	90, 274, 465
AsuHPI	GGTGA	8 cut(s)	103, 814, 1130, 1226, 1629, 1656, 1760, 1980
AvaI	CYCGRG	1 cut(s)	452
AvaII	GGWCC	1 cut(s)	500
BaeGI	GKGCMC	1 cut(s)	1652
BanI	GGYRCC	2 cut(s)	190, 943
BanII	GRGCYC	2 cut(s)	1652, 1706
BauI	CACGAG	1 cut(s)	1602
BbsI	GAAGAC	1 cut(s)	1227
Bbv12I	GWGCWC	1 cut(s)	1091
BbvI	GCAGC	3 cut(s)	320, 832, 1471
BccI	CCATC	3 cut(s)	399, 715, 1760
BceAI	ACGGC	1 cut(s)	272
BciT130I	CCWGG	4 cut(s)	68, 1371, 1707, 1992
BclI	TGATCA	2 cut(s)	1539, 1879
BcnI	CCSGG	3 cut(s)	90, 274, 465
BcoDI	GTCTC	3 cut(s)	582, 1805, 1938
BcuI	ACTAGT	1 cut(s)	1688
BfaI	CTAG	1 cut(s)	1689
BfmI	CTRYAG	3 cut(s)	180, 935, 1485
BfuAI	ACCTGC	2 cut(s)	570, 1623
BglII	AGATCT	1 cut(s)	1489
BisI	GCNGC	5 cut(s)	232, 309, 846, 956, 1485
BlsI	GCNGC	5 cut(s)	233, 310, 847, 957, 1486
Bme1390I	CCNGG	7 cut(s)	68, 90, 274, 465, 1371, 1707, 1992
Bme18I	GGWCC	1 cut(s)	500
BmeT110I	CYCGRG	1 cut(s)	452
BmgT120I	GGNCC	3 cut(s)	500, 1648, 1649
BmiI	GGNNCC	7 cut(s)	19, 192, 726, 816, 945, 1649, 1650
BmrFI	CCNGG	7 cut(s)	68, 90, 274, 465, 1371, 1707, 1992
BmrI	ACTGGG	2 cut(s)	816, 1548
BmsI	GCATC	7 cut(s)	129, 617, 662, 898, 974, 991, 1994
BmuI	ACTGGG	2 cut(s)	816, 1548
BoxI	GACNNNNGTC	1 cut(s)	1365
BpiI	GAAGAC	1 cut(s)	1227
BpmI	CTGGAG	2 cut(s)	1077, 1813
BpuEI	CTTGAG	1 cut(s)	911
BpuMI	CCSGG	3 cut(s)	90, 274, 465
Bsa29I	ATCGAT	1 cut(s)	473
BsaBI	GATNNNNATC	3 cut(s)	140, 475, 1299
BsaI	GGTCTC	1 cut(s)	1805
BsaJI	CCNNGG	4 cut(s)	273, 324, 818, 1705
BsaWI	WCCGGW	2 cut(s)	522, 727
BsaXI	ACNNNNNCTCC	4 cut(s)	199, 229, 1534, 1564
Bsc4I	CCNNNNNNNGG	5 cut(s)	89, 1376, 1646, 1658, 1712
Bse1I	ACTGG	7 cut(s)	691, 751, 811, 1554, 1796, 1831, 1893
Bse3DI	GCAATG	1 cut(s)	1338
Bse8I	GATNNNNATC	3 cut(s)	140, 475, 1299
BseAI	TCCGGA	2 cut(s)	522, 727
BseBI	CCWGG	4 cut(s)	68, 1371, 1707, 1992
BseCI	ATCGAT	1 cut(s)	473
BseDI	CCNNGG	4 cut(s)	273, 324, 818, 1705
BseJI	GATNNNNATC	3 cut(s)	140, 475, 1299
BseLI	CCNNNNNNNGG	5 cut(s)	89, 1376, 1646, 1658, 1712
BseMI	GCAATG	1 cut(s)	1338
BseMII	CTCAG	4 cut(s)	350, 660, 960, 1440
BseNI	ACTGG	7 cut(s)	691, 751, 811, 1554, 1796, 1831, 1893
BseRI	GAGGAG	4 cut(s)	153, 156, 892, 1500
BseSI	GKGCMC	1 cut(s)	1652
BseXI	GCAGC	3 cut(s)	320, 832, 1471
BsgI	GTGCAG	1 cut(s)	548
Bsh1236I	CGCG	2 cut(s)	231, 236
Bsh1285I	CGRYCG	1 cut(s)	32
BshFI	GGCC	2 cut(s)	958, 1650
BshNI	GGYRCC	2 cut(s)	190, 943
BshVI	ATCGAT	1 cut(s)	473
BsiEI	CGRYCG	1 cut(s)	32
BsiHKAI	GWGCWC	1 cut(s)	1091
BsiHKCI	CYCGRG	1 cut(s)	452
BsiSI	CCGG	5 cut(s)	90, 273, 465, 523, 728
BslFI	GGGAC	1 cut(s)	721
BslI	CCNNNNNNNGG	5 cut(s)	89, 1376, 1646, 1658, 1712
BsmAI	GTCTC	3 cut(s)	582, 1805, 1938
BsmFI	GGGAC	1 cut(s)	721
BsnI	GGCC	2 cut(s)	958, 1650
Bso31I	GGTCTC	1 cut(s)	1805
BsoBI	CYCGRG	1 cut(s)	452
Bsp120I	GGGCCC	1 cut(s)	1648
Bsp1286I	GDGCHC	3 cut(s)	1091, 1652, 1706
Bsp13I	TCCGGA	2 cut(s)	522, 727
Bsp1407I	TGTACA	2 cut(s)	249, 785
Bsp143I	GATC	9 cut(s)	29, 108, 470, 1024, 1159, 1489, 1539, 1879, 1931
BspACI	CCGC	4 cut(s)	124, 231, 955, 963
BspANI	GGCC	2 cut(s)	958, 1650
BspCNI	CTCAG	4 cut(s)	349, 661, 961, 1439
BspDI	ATCGAT	1 cut(s)	473
BspEI	TCCGGA	2 cut(s)	522, 727
BspFNI	CGCG	2 cut(s)	231, 236
BspLI	GGNNCC	7 cut(s)	19, 192, 726, 816, 945, 1649, 1650
BspMAI	CTGCAG	2 cut(s)	939, 1489
BspMI	ACCTGC	2 cut(s)	570, 1623
BspPI	GGATC	3 cut(s)	478, 1154, 1939
BspQI	GCTCTTC	2 cut(s)	1304, 1866
BspT107I	GGYRCC	2 cut(s)	190, 943
BspTNI	GGTCTC	1 cut(s)	1805
BsrDI	GCAATG	1 cut(s)	1338
BsrGI	TGTACA	2 cut(s)	249, 785
BsrI	ACTGG	7 cut(s)	691, 751, 811, 1554, 1796, 1831, 1893
BssECI	CCNNGG	4 cut(s)	273, 324, 818, 1705
BssMI	GATC	9 cut(s)	29, 108, 470, 1024, 1159, 1489, 1539, 1879, 1931
BssSI	CACGAG	1 cut(s)	1602
BssT1I	CCWWGG	2 cut(s)	324, 818
Bst2BI	CACGAG	1 cut(s)	1602
Bst2UI	CCWGG	4 cut(s)	68, 1371, 1707, 1992
Bst4CI	ACNGT	6 cut(s)	181, 247, 421, 790, 1065, 1583
Bst6I	CTCTTC	2 cut(s)	1304, 1866
BstAUI	TGTACA	2 cut(s)	249, 785
BstC8I	GCNNGC	1 cut(s)	639
BstDEI	CTNAG	7 cut(s)	336, 669, 969, 1049, 1426, 1471, 1815
BstEII	GGTNACC	1 cut(s)	1635
BstFNI	CGCG	2 cut(s)	231, 236
BstHHI	GCGC	2 cut(s)	236, 1917
BstKTI	GATC	9 cut(s)	32, 111, 473, 1027, 1162, 1492, 1542, 1882, 1934
BstMAI	GTCTC	3 cut(s)	582, 1805, 1938
BstMBI	GATC	9 cut(s)	29, 108, 470, 1024, 1159, 1489, 1539, 1879, 1931
BstMCI	CGRYCG	1 cut(s)	32
BstMWI	GCNNNNNNNGC	4 cut(s)	317, 674, 979, 1682
BstNI	CCWGG	4 cut(s)	68, 1371, 1707, 1992
BstNSI	RCATGY	1 cut(s)	1126
BstPAI	GACNNNNGTC	1 cut(s)	1365
BstPI	GGTNACC	1 cut(s)	1635
BstSCI	CCNGG	7 cut(s)	66, 88, 272, 463, 1369, 1705, 1990
BstSFI	CTRYAG	3 cut(s)	180, 935, 1485
BstSLI	GKGCMC	1 cut(s)	1652
BstUI	CGCG	2 cut(s)	231, 236
BstV1I	GCAGC	3 cut(s)	320, 832, 1471
BstV2I	GAAGAC	1 cut(s)	1227
BstX2I	RGATCY	2 cut(s)	1159, 1489
BstXI	CCANNNNNNTGG	1 cut(s)	1561
BstYI	RGATCY	2 cut(s)	1159, 1489
Bsu15I	ATCGAT	1 cut(s)	473
BsuRI	GGCC	2 cut(s)	958, 1650
BsuTUI	ATCGAT	1 cut(s)	473
BtgZI	GCGATG	1 cut(s)	465
BtsI	GCAGTG	1 cut(s)	1596
BtsIMutI	CAGTG	4 cut(s)	177, 426, 1596, 1838
BveI	ACCTGC	2 cut(s)	570, 1623
Cac8I	GCNNGC	1 cut(s)	639
CaiI	CAGNNNCTG	1 cut(s)	301
CfoI	GCGC	2 cut(s)	236, 1917
Cfr13I	GGNCC	3 cut(s)	500, 1648, 1649
ClaI	ATCGAT	1 cut(s)	473
CseI	GACGC	2 cut(s)	766, 1691
Csp6I	GTAC	6 cut(s)	243, 250, 417, 559, 786, 944
CviAII	CATG	7 cut(s)	187, 253, 572, 1123, 1402, 1912, 1954
CviQI	GTAC	6 cut(s)	243, 250, 417, 559, 786, 944
DdeI	CTNAG	7 cut(s)	336, 669, 969, 1049, 1426, 1471, 1815
DpnI	GATC	9 cut(s)	31, 110, 472, 1026, 1161, 1491, 1541, 1881, 1933
DpnII	GATC	9 cut(s)	29, 108, 470, 1024, 1159, 1489, 1539, 1879, 1931
EaeI	YGGCCR	1 cut(s)	956
Eam1104I	CTCTTC	2 cut(s)	1304, 1866
EarI	CTCTTC	2 cut(s)	1304, 1866
Eco130I	CCWWGG	2 cut(s)	324, 818
Eco24I	GRGCYC	2 cut(s)	1652, 1706
Eco31I	GGTCTC	1 cut(s)	1805
Eco32I	GATATC	1 cut(s)	477
Eco47I	GGWCC	1 cut(s)	500
Eco57I	CTGAAG	1 cut(s)	1325
Eco88I	CYCGRG	1 cut(s)	452
Eco91I	GGTNACC	1 cut(s)	1635
EcoO109I	RGGNCCY	2 cut(s)	1648, 1649
EcoO65I	GGTNACC	1 cut(s)	1635
EcoRI	GAATTC	1 cut(s)	1523
EcoRII	CCWGG	4 cut(s)	66, 1369, 1705, 1990
EcoRV	GATATC	1 cut(s)	477
EcoT14I	CCWWGG	2 cut(s)	324, 818
EcoT22I	ATGCAT	1 cut(s)	632
EcoT38I	GRGCYC	2 cut(s)	1652, 1706
ErhI	CCWWGG	2 cut(s)	324, 818
FaeI	CATG	7 cut(s)	190, 256, 575, 1126, 1405, 1915, 1957
FalI	AAGNNNNNCTT	4 cut(s)	357, 389, 723, 755
FaqI	GGGAC	1 cut(s)	721
FatI	CATG	7 cut(s)	186, 252, 571, 1122, 1401, 1911, 1953
FauNDI	CATATG	1 cut(s)	770
FbaI	TGATCA	2 cut(s)	1539, 1879
FblI	GTMKAC	2 cut(s)	183, 1391
Fnu4HI	GCNGC	5 cut(s)	232, 309, 846, 956, 1485
FriOI	GRGCYC	2 cut(s)	1652, 1706
Fsp4HI	GCNGC	5 cut(s)	232, 309, 846, 956, 1485
FspBI	CTAG	1 cut(s)	1689
GlaI	GCGC	2 cut(s)	235, 1916
GluI	GCNGC	5 cut(s)	232, 309, 846, 956, 1485
GsuI	CTGGAG	2 cut(s)	1077, 1813
HaeIII	GGCC	2 cut(s)	958, 1650
HapII	CCGG	5 cut(s)	90, 273, 465, 523, 728
HgaI	GACGC	2 cut(s)	766, 1691
HhaI	GCGC	2 cut(s)	236, 1917
Hin1II	CATG	7 cut(s)	190, 256, 575, 1126, 1405, 1915, 1957
Hin6I	GCGC	2 cut(s)	234, 1915
HinP1I	GCGC	2 cut(s)	234, 1915
HincII	GTYRAC	1 cut(s)	1810
HindII	GTYRAC	1 cut(s)	1810
HindIII	AAGCTT	4 cut(s)	371, 635, 1464, 1755
HpaII	CCGG	5 cut(s)	90, 273, 465, 523, 728
HphI	GGTGA	8 cut(s)	103, 814, 1130, 1226, 1629, 1656, 1760, 1980
Hpy166II	GTNNAC	5 cut(s)	184, 250, 1392, 1664, 1810
Hpy188I	TCNGA	8 cut(s)	55, 198, 303, 907, 970, 1305, 1429, 1849
Hpy8I	GTNNAC	5 cut(s)	184, 250, 1392, 1664, 1810
Hpy99I	CGWCG	5 cut(s)	30, 59, 62, 782, 1112
HpyAV	CCTTC	8 cut(s)	57, 163, 458, 805, 1428, 1474, 1677, 1861
HpyCH4III	ACNGT	6 cut(s)	181, 247, 421, 790, 1065, 1583
HpyF10VI	GCNNNNNNNGC	4 cut(s)	317, 674, 979, 1682
HpyF3I	CTNAG	7 cut(s)	336, 669, 969, 1049, 1426, 1471, 1815
Hsp92II	CATG	7 cut(s)	190, 256, 575, 1126, 1405, 1915, 1957
HspAI	GCGC	2 cut(s)	234, 1915
Kpn2I	TCCGGA	2 cut(s)	522, 727
KpnI	GGTACC	1 cut(s)	947
Ksp22I	TGATCA	2 cut(s)	1539, 1879
Kzo9I	GATC	9 cut(s)	29, 108, 470, 1024, 1159, 1489, 1539, 1879, 1931
LguI	GCTCTTC	2 cut(s)	1304, 1866
LmnI	GCTCC	6 cut(s)	23, 277, 352, 730, 774, 820
Lsp1109I	GCAGC	3 cut(s)	320, 832, 1471
LweI	GCATC	7 cut(s)	129, 617, 662, 898, 974, 991, 1994
MaeI	CTAG	1 cut(s)	1689
MaeIII	GTNAC	9 cut(s)	802, 1065, 1118, 1127, 1409, 1500, 1577, 1635, 1783
MalI	GATC	9 cut(s)	31, 110, 472, 1026, 1161, 1491, 1541, 1881, 1933
MboI	GATC	9 cut(s)	29, 108, 470, 1024, 1159, 1489, 1539, 1879, 1931
MflI	RGATCY	2 cut(s)	1159, 1489
MhlI	GDGCHC	3 cut(s)	1091, 1652, 1706
MlyI	GAGTC	8 cut(s)	263, 328, 832, 1019, 1397, 1460, 1501, 1651
MmeI	TCCRAC	2 cut(s)	78, 534
Mph1103I	ATGCAT	1 cut(s)	632
MroI	TCCGGA	2 cut(s)	522, 727
MroXI	GAANNNNTTC	1 cut(s)	735
MseI	TTAA	9 cut(s)	221, 369, 378, 594, 633, 1461, 1574, 1737, 1826
MslI	CAYNNNNRTG	2 cut(s)	257, 570
MspI	CCGG	5 cut(s)	90, 273, 465, 523, 728
MspR9I	CCNGG	7 cut(s)	68, 90, 274, 465, 1371, 1707, 1992
MvaI	CCWGG	4 cut(s)	68, 1371, 1707, 1992
MvnI	CGCG	2 cut(s)	231, 236
MwoI	GCNNNNNNNGC	4 cut(s)	317, 674, 979, 1682
NciI	CCSGG	3 cut(s)	90, 274, 465
NdeI	CATATG	1 cut(s)	770
NdeII	GATC	9 cut(s)	29, 108, 470, 1024, 1159, 1489, 1539, 1879, 1931
NlaIII	CATG	7 cut(s)	190, 256, 575, 1126, 1405, 1915, 1957
NlaIV	GGNNCC	7 cut(s)	19, 192, 726, 816, 945, 1649, 1650
NmuCI	GTSAC	5 cut(s)	802, 1118, 1409, 1635, 1783
NsiI	ATGCAT	1 cut(s)	632
NspI	RCATGY	1 cut(s)	1126
PaeR7I	CTCGAG	1 cut(s)	452
PciI	ACATGT	1 cut(s)	1122
PciSI	GCTCTTC	2 cut(s)	1304, 1866
PdmI	GAANNNNTTC	1 cut(s)	735
PfeI	GAWTC	3 cut(s)	262, 512, 1097
PflFI	GACNNNGTC	1 cut(s)	1450
PflMI	CCANNNNNTGG	1 cut(s)	1712
PkrI	GCNGC	5 cut(s)	233, 310, 847, 957, 1486
Ple19I	CGATCG	1 cut(s)	32
PleI	GAGTC	8 cut(s)	263, 328, 831, 1018, 1396, 1459, 1501, 1650
PpsI	GAGTC	8 cut(s)	263, 328, 831, 1018, 1396, 1459, 1501, 1650
PscI	ACATGT	1 cut(s)	1122
PshAI	GACNNNNGTC	1 cut(s)	1365
Psp6I	CCWGG	4 cut(s)	66, 1369, 1705, 1990
PspEI	GGTNACC	1 cut(s)	1635
PspGI	CCWGG	4 cut(s)	66, 1369, 1705, 1990
PspN4I	GGNNCC	7 cut(s)	19, 192, 726, 816, 945, 1649, 1650
PspOMI	GGGCCC	1 cut(s)	1648
PspPI	GGNCC	3 cut(s)	500, 1648, 1649
PstI	CTGCAG	2 cut(s)	939, 1489
PstNI	CAGNNNCTG	1 cut(s)	301
PsuI	RGATCY	2 cut(s)	1159, 1489
PsyI	GACNNNGTC	1 cut(s)	1450
PvuI	CGATCG	1 cut(s)	32
RsaI	GTAC	6 cut(s)	244, 251, 418, 560, 787, 945
RsaNI	GTAC	6 cut(s)	243, 250, 417, 559, 786, 944
RseI	CAYNNNNRTG	2 cut(s)	257, 570
SapI	GCTCTTC	2 cut(s)	1304, 1866
SaqAI	TTAA	9 cut(s)	221, 369, 378, 594, 633, 1461, 1574, 1737, 1826
SatI	GCNGC	5 cut(s)	232, 309, 846, 956, 1485
Sau3AI	GATC	9 cut(s)	29, 108, 470, 1024, 1159, 1489, 1539, 1879, 1931
Sau96I	GGNCC	3 cut(s)	500, 1648, 1649
SchI	GAGTC	8 cut(s)	263, 328, 832, 1019, 1397, 1460, 1501, 1651
ScrFI	CCNGG	7 cut(s)	68, 90, 274, 465, 1371, 1707, 1992
SduI	GDGCHC	3 cut(s)	1091, 1652, 1706
SfaNI	GCATC	7 cut(s)	129, 617, 662, 898, 974, 991, 1994
SfcI	CTRYAG	3 cut(s)	180, 935, 1485
Sfr274I	CTCGAG	1 cut(s)	452
SinI	GGWCC	1 cut(s)	500
SlaI	CTCGAG	1 cut(s)	452
SmiMI	CAYNNNNRTG	2 cut(s)	257, 570
SmlI	CTYRAG	2 cut(s)	452, 926
SmoI	CTYRAG	2 cut(s)	452, 926
SpeI	ACTAGT	1 cut(s)	1688
SsiI	CCGC	4 cut(s)	124, 231, 955, 963
SspI	AATATT	1 cut(s)	1735
SspMI	CTAG	1 cut(s)	1689
StyD4I	CCNGG	7 cut(s)	66, 88, 272, 463, 1369, 1705, 1990
StyI	CCWWGG	2 cut(s)	324, 818
TaaI	ACNGT	6 cut(s)	181, 247, 421, 790, 1065, 1583
TaqI	TCGA	5 cut(s)	28, 131, 453, 473, 1976
TaqII	GACCGA	1 cut(s)	1463
TatI	WGTACW	2 cut(s)	249, 785
TauI	GCSGC	2 cut(s)	234, 958
TfiI	GAWTC	3 cut(s)	262, 512, 1097
Tru1I	TTAA	9 cut(s)	221, 369, 378, 594, 633, 1461, 1574, 1737, 1826
Tru9I	TTAA	9 cut(s)	221, 369, 378, 594, 633, 1461, 1574, 1737, 1826
TscAI	CASTG	4 cut(s)	184, 426, 1603, 1838
TseFI	GTSAC	5 cut(s)	802, 1118, 1409, 1635, 1783
TseI	GCWGC	3 cut(s)	308, 845, 1484
Tsp45I	GTSAC	5 cut(s)	802, 1118, 1409, 1635, 1783
TspDTI	ATGAA	7 cut(s)	275, 716, 847, 1233, 1410, 1533, 1767
TspGWI	ACGGA	4 cut(s)	10, 32, 72, 1281
TspRI	CASTG	4 cut(s)	184, 426, 1603, 1838
Tth111I	GACNNNGTC	1 cut(s)	1450
Van91I	CCANNNNNTGG	1 cut(s)	1712
VpaK11BI	GGWCC	1 cut(s)	500
XapI	RAATTY	5 cut(s)	494, 1186, 1249, 1355, 1523
XceI	RCATGY	1 cut(s)	1126
XhoI	CTCGAG	1 cut(s)	452
XmiI	GTMKAC	2 cut(s)	183, 1391
XmnI	GAANNNNTTC	1 cut(s)	735
XspI	CTAG	1 cut(s)	1689
Zsp2I	ATGCAT	1 cut(s)	632

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.