Rh3AG061600

Mitogen-activated protein kinase kinase kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
4274095 .. 4274413
319 bp
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UTR
Exon/CDS
Intron
Rh3AG061600.1

Sequence Viewer

Length: 246 bp
ATGTCAACATGCCGAGATTCATCTGATATGTGTAATATGGGTAGTTTGCACTGCTCAACCATAAATCCTGACAAGGTGTTGGAAAGTACACACATTTGGGGAAGAGACAGTGATGATGACATGTGTCAGATTGATGACAAACATGATGTTATGGTCGGTGAAGTAAACCTCGATTCTTCTTATATGCCCGACGACCTTAAGAGGCTTAGAGCTTTAACCCGATGTGCGAGCCCACTGATGAGATGA

Protein Analysis

81

Amino Acids

9.17

Weight (kDa)

4.7

Isoelectric Point (pI)

46.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 88
AflII CTTAAG 1 cut(s) 197
AflIII ACRYGT 1 cut(s) 120
AluBI AGCT 1 cut(s) 212
AluI AGCT 1 cut(s) 212
Alw26I GTCTC 1 cut(s) 99
AsuHPI GGTGA 1 cut(s) 170
BanII GRGCYC 1 cut(s) 233
BcoDI GTCTC 1 cut(s) 99
BfrI CTTAAG 1 cut(s) 197
BoxI GACNNNNGTC 1 cut(s) 123
BsmAI GTCTC 1 cut(s) 99
Bsp1286I GDGCHC 1 cut(s) 233
BspTI CTTAAG 1 cut(s) 197
Bst4CI ACNGT 1 cut(s) 110
Bst6I CTCTTC 1 cut(s) 97
BstAFI CTTAAG 1 cut(s) 197
BstC8I GCNNGC 1 cut(s) 229
BstDEI CTNAG 1 cut(s) 206
BstMAI GTCTC 1 cut(s) 99
BstNSI RCATGY 2 cut(s) 12, 124
BstPAI GACNNNNGTC 1 cut(s) 123
BtsI GCAGTG 1 cut(s) 49
BtsIMutI CAGTG 3 cut(s) 49, 115, 233
Cac8I GCNNGC 1 cut(s) 229
Csp6I GTAC 1 cut(s) 87
CviAII CATG 3 cut(s) 9, 121, 143
CviJI RGCY 3 cut(s) 205, 212, 231
CviKI_1 RGCY 3 cut(s) 205, 212, 231
CviQI GTAC 1 cut(s) 87
DdeI CTNAG 1 cut(s) 206
Eam1104I CTCTTC 1 cut(s) 97
EarI CTCTTC 1 cut(s) 97
Eco24I GRGCYC 1 cut(s) 233
EcoT38I GRGCYC 1 cut(s) 233
FaeI CATG 3 cut(s) 12, 124, 146
FaiI YATR 9 cut(s) 10, 29, 38, 62, 122, 144, 152, 183, 185
FatI CATG 3 cut(s) 8, 120, 142
FriOI GRGCYC 1 cut(s) 233
Hin1II CATG 3 cut(s) 12, 124, 146
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 2 cut(s) 17, 173
HphI GGTGA 1 cut(s) 170
Hpy166II GTNNAC 3 cut(s) 6, 89, 166
Hpy188I TCNGA 2 cut(s) 25, 129
Hpy188III TCNNGA 1 cut(s) 68
Hpy8I GTNNAC 3 cut(s) 6, 89, 166
Hpy99I CGWCG 1 cut(s) 194
HpyCH4III ACNGT 1 cut(s) 110
HpyCH4V TGCA 1 cut(s) 49
HpyF3I CTNAG 1 cut(s) 206
Hsp92II CATG 3 cut(s) 12, 124, 146
LpnPI CCDG 1 cut(s) 81
MboII GAAGA 2 cut(s) 114, 168
MhlI GDGCHC 1 cut(s) 233
MmeI TCCRAC 1 cut(s) 60
MnlI CCTC 2 cut(s) 179, 195
MseI TTAA 2 cut(s) 198, 215
MspCI CTTAAG 1 cut(s) 197
NlaIII CATG 3 cut(s) 12, 124, 146
NmeAIII GCCGAG 1 cut(s) 38
NspI RCATGY 2 cut(s) 12, 124
PciI ACATGT 1 cut(s) 120
PfeI GAWTC 2 cut(s) 17, 173
PscI ACATGT 1 cut(s) 120
PshAI GACNNNNGTC 1 cut(s) 123
RsaI GTAC 1 cut(s) 88
RsaNI GTAC 1 cut(s) 87
SaqAI TTAA 2 cut(s) 198, 215
SduI GDGCHC 1 cut(s) 233
SetI ASST 4 cut(s) 78, 171, 198, 214
SmlI CTYRAG 1 cut(s) 197
SmoI CTYRAG 1 cut(s) 197
TaaI ACNGT 1 cut(s) 110
TaqI TCGA 1 cut(s) 171
TatI WGTACW 1 cut(s) 86
TfiI GAWTC 2 cut(s) 17, 173
Tru1I TTAA 2 cut(s) 198, 215
Tru9I TTAA 2 cut(s) 198, 215
TscAI CASTG 3 cut(s) 56, 115, 240
TspDTI ATGAA 1 cut(s) 9
TspRI CASTG 3 cut(s) 56, 115, 240
Vha464I CTTAAG 1 cut(s) 197
XceI RCATGY 2 cut(s) 12, 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.