Rh5BG171800

MAP kinase kinase kinase activity

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
18027850 .. 18029296
1447 bp
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UTR
Exon/CDS
Intron
Rh5BG171800.1

Sequence Viewer

Length: 456 bp
ATGGGCATGAACACTGAATCCGGACAGCTTATTGCTGTGAAAGAGGCTCATACCAAGGTGCTTCAAGATGAAGTGAGGCTTTTAGAAAACCTGTCACATCCGAAAATTATTAGATGTTTAGGAACCGAGAGGGAGGATGAAACCTTAACTATGCTGTTGGAATATGTACCTGGAGGATCCATACAAGCACTATTGGAGAAATTTGGATCTTTCTCTGTACCTGTAATAAAAAGATTCACCAAGCAGTTGTTGCTGGCACTAGAATATTTACACAAAAAAGGAATCATACATGGGGACATTAAGGGAGCAAATATCCTTGTTGATAATAAAGGGCGCATTAAACTAGCAGATTTTGGTGCATCCAAACAGGCAGCCGTTTCAGGTGCAAAGCCTACAAGGGGTACACCATACTGGATGGCTCCTGAAGTCATTCGTGGGACTGGTCATGACTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

151

Amino Acids

16.59

Weight (kDa)

9.01

Isoelectric Point (pI)

26.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 5 - 149 9e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 15 - 145 1.1e-25 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 20 - 124 2e-08 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 20
AclWI GGATC 3 cut(s) 171, 184, 214
AcsI RAATTY 1 cut(s) 200
AcuI CTGAAG 1 cut(s) 444
AfaI GTAC 3 cut(s) 168, 219, 403
AfiI CCNNNNNNNGG 1 cut(s) 398
AgsI TTSAA 1 cut(s) 65
AjnI CCWGG 1 cut(s) 169
AloI GAACNNNNNNTCC 1 cut(s) 34
AluBI AGCT 1 cut(s) 28
AluI AGCT 1 cut(s) 28
AlwI GGATC 3 cut(s) 171, 184, 214
Aor13HI TCCGGA 1 cut(s) 20
ApeKI GCWGC 1 cut(s) 371
ApoI RAATTY 1 cut(s) 200
Asp700I GAANNNNTTC 1 cut(s) 429
AspLEI GCGC 1 cut(s) 336
AsuHPI GGTGA 1 cut(s) 229
BamHI GGATCC 1 cut(s) 176
BbvI GCAGC 1 cut(s) 383
BccI CCATC 1 cut(s) 409
BceAI ACGGC 1 cut(s) 359
BciT130I CCWGG 1 cut(s) 171
BfaI CTAG 2 cut(s) 260, 344
BisI GCNGC 1 cut(s) 372
BlsI GCNGC 1 cut(s) 373
Bme1390I CCNGG 1 cut(s) 171
BmiI GGNNCC 3 cut(s) 124, 178, 420
BmrFI CCNGG 1 cut(s) 171
BmsI GCATC 1 cut(s) 368
BpmI CTGGAG 1 cut(s) 192
BsaJI CCNNGG 1 cut(s) 54
BsaWI WCCGGW 1 cut(s) 20
Bsc4I CCNNNNNNNGG 1 cut(s) 398
Bse1I ACTGG 2 cut(s) 416, 445
BseAI TCCGGA 1 cut(s) 20
BseBI CCWGG 1 cut(s) 171
BseDI CCNNGG 1 cut(s) 54
BseGI GGATG 4 cut(s) 97, 142, 359, 420
BseLI CCNNNNNNNGG 1 cut(s) 398
BseNI ACTGG 2 cut(s) 416, 445
BseXI GCAGC 1 cut(s) 383
BsiSI CCGG 1 cut(s) 21
BslFI GGGAC 2 cut(s) 308, 451
BslI CCNNNNNNNGG 1 cut(s) 398
BsmFI GGGAC 2 cut(s) 308, 451
Bsp13I TCCGGA 1 cut(s) 20
Bsp143I GATC 2 cut(s) 176, 206
BspEI TCCGGA 1 cut(s) 20
BspHI TCATGA 1 cut(s) 445
BspLI GGNNCC 3 cut(s) 124, 178, 420
BspPI GGATC 3 cut(s) 171, 184, 214
BsrI ACTGG 2 cut(s) 416, 445
BssECI CCNNGG 1 cut(s) 54
BssMI GATC 2 cut(s) 176, 206
BssT1I CCWWGG 1 cut(s) 54
Bst2UI CCWGG 1 cut(s) 171
BstAPI GCANNNNNTGC 1 cut(s) 250
BstC8I GCNNGC 1 cut(s) 255
BstF5I GGATG 4 cut(s) 97, 142, 359, 420
BstHHI GCGC 1 cut(s) 336
BstKTI GATC 2 cut(s) 179, 209
BstMBI GATC 2 cut(s) 176, 206
BstMWI GCNNNNNNNGC 1 cut(s) 250
BstNI CCWGG 1 cut(s) 171
BstSCI CCNGG 1 cut(s) 169
BstV1I GCAGC 1 cut(s) 383
BstX2I RGATCY 2 cut(s) 176, 206
BstYI RGATCY 2 cut(s) 176, 206
BtsCI GGATG 4 cut(s) 97, 142, 359, 420
BtsIMutI CAGTG 1 cut(s) 12
Cac8I GCNNGC 1 cut(s) 255
CciI TCATGA 1 cut(s) 445
CfoI GCGC 1 cut(s) 336
Csp6I GTAC 3 cut(s) 167, 218, 402
CviAII CATG 3 cut(s) 7, 290, 446
CviJI RGCY 6 cut(s) 28, 47, 79, 374, 391, 419
CviKI_1 RGCY 6 cut(s) 28, 47, 79, 374, 391, 419
CviQI GTAC 3 cut(s) 167, 218, 402
DpnI GATC 2 cut(s) 178, 208
DpnII GATC 2 cut(s) 176, 206
Eco130I CCWWGG 1 cut(s) 54
Eco57I CTGAAG 1 cut(s) 444
EcoRII CCWGG 1 cut(s) 169
EcoT14I CCWWGG 1 cut(s) 54
ErhI CCWWGG 1 cut(s) 54
FaeI CATG 3 cut(s) 10, 293, 449
FaiI YATR 9 cut(s) 8, 51, 152, 165, 182, 287, 291, 409, 447
FalI AAGNNNNNCTT 2 cut(s) 63, 95
FaqI GGGAC 2 cut(s) 308, 451
FatI CATG 3 cut(s) 6, 289, 445
Fnu4HI GCNGC 1 cut(s) 372
FokI GGATG 4 cut(s) 84, 149, 346, 427
Fsp4HI GCNGC 1 cut(s) 372
FspBI CTAG 2 cut(s) 260, 344
GlaI GCGC 1 cut(s) 335
GluI GCNGC 1 cut(s) 372
GsuI CTGGAG 1 cut(s) 192
HapII CCGG 1 cut(s) 21
HhaI GCGC 1 cut(s) 336
Hin1II CATG 3 cut(s) 10, 293, 449
Hin6I GCGC 1 cut(s) 334
HinP1I GCGC 1 cut(s) 334
HinfI GANTC 3 cut(s) 17, 234, 282
HpaII CCGG 1 cut(s) 21
HphI GGTGA 1 cut(s) 229
Hpy166II GTNNAC 1 cut(s) 404
Hpy188I TCNGA 1 cut(s) 102
Hpy188III TCNNGA 4 cut(s) 21, 65, 422, 446
Hpy8I GTNNAC 1 cut(s) 404
HpyCH4V TGCA 2 cut(s) 359, 386
HpyF10VI GCNNNNNNNGC 1 cut(s) 250
Hsp92II CATG 3 cut(s) 10, 293, 449
HspAI GCGC 1 cut(s) 334
Kpn2I TCCGGA 1 cut(s) 20
Kzo9I GATC 2 cut(s) 176, 206
LmnI GCTCC 2 cut(s) 305, 424
Lsp1109I GCAGC 1 cut(s) 383
LweI GCATC 1 cut(s) 368
MaeI CTAG 2 cut(s) 260, 344
MaeIII GTNAC 1 cut(s) 93
MalI GATC 2 cut(s) 178, 208
MboI GATC 2 cut(s) 176, 206
MflI RGATCY 2 cut(s) 176, 206
MluCI AATT 2 cut(s) 105, 200
MmeI TCCRAC 1 cut(s) 138
MnlI CCTC 5 cut(s) 37, 69, 123, 127, 167
MroI TCCGGA 1 cut(s) 20
MroXI GAANNNNTTC 1 cut(s) 429
MseI TTAA 3 cut(s) 146, 300, 339
MspI CCGG 1 cut(s) 21
MspR9I CCNGG 1 cut(s) 171
MvaI CCWGG 1 cut(s) 171
MwoI GCNNNNNNNGC 1 cut(s) 250
NdeII GATC 2 cut(s) 176, 206
NlaIII CATG 3 cut(s) 10, 293, 449
NlaIV GGNNCC 3 cut(s) 124, 178, 420
NmuCI GTSAC 1 cut(s) 93
PagI TCATGA 1 cut(s) 445
PdmI GAANNNNTTC 1 cut(s) 429
PfeI GAWTC 3 cut(s) 17, 234, 282
PkrI GCNGC 1 cut(s) 373
Psp6I CCWGG 1 cut(s) 169
PspGI CCWGG 1 cut(s) 169
PspN4I GGNNCC 3 cut(s) 124, 178, 420
PsuI RGATCY 2 cut(s) 176, 206
RsaI GTAC 3 cut(s) 168, 219, 403
RsaNI GTAC 3 cut(s) 167, 218, 402
SaqAI TTAA 3 cut(s) 146, 300, 339
SatI GCNGC 1 cut(s) 372
Sau3AI GATC 2 cut(s) 176, 206
ScrFI CCNGG 1 cut(s) 171
SetI ASST 7 cut(s) 30, 60, 93, 146, 172, 223, 385
SfaNI GCATC 1 cut(s) 368
Sse9I AATT 2 cut(s) 105, 200
SspI AATATT 1 cut(s) 266
SspMI CTAG 2 cut(s) 260, 344
StyD4I CCNGG 1 cut(s) 169
StyI CCWWGG 1 cut(s) 54
TasI AATT 2 cut(s) 105, 200
TfiI GAWTC 3 cut(s) 17, 234, 282
Tru1I TTAA 3 cut(s) 146, 300, 339
Tru9I TTAA 3 cut(s) 146, 300, 339
TscAI CASTG 1 cut(s) 19
TseFI GTSAC 1 cut(s) 93
TseI GCWGC 1 cut(s) 371
Tsp45I GTSAC 1 cut(s) 93
TspDTI ATGAA 3 cut(s) 23, 84, 153
TspRI CASTG 1 cut(s) 19
XapI RAATTY 1 cut(s) 200
XmnI GAANNNNTTC 1 cut(s) 429
XspI CTAG 2 cut(s) 260, 344
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.