Rw5G015780

MAP kinase kinase kinase activity

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
19631346 .. 19636147
4802 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G015780.1

Sequence Viewer

Length: 2046 bp
ATGTCTTCAATCCCCAGAGACGAAACAGCCTCGATTCAATGGCAGAAGGGCGATTTGATCGGTTCCGGGGCCTTTGGCCGTGTTTACATGGGCATGAATACAGAATCCGGAGAGCTTATTGCTGCAAAAGAGGCTCATACCAAGGTGCTTCAAGATGAAGTGAGGCTTTTAGAAAACCTGTCGCATCCGAAAATTATTAGATGTTTAGGAACCGAGAGGGAGGATGAAACCTTAACTATGCTGTTGGAATATGTACCTGGAGGATCCATACAAGCACTATTGGAGAAATTTGGATCTTTCTCAGTTCCTGTAAGCTTTTTGTTGGCTAAATTTTTATTCACCAAGCAGTTGTTGCTGGCACTAGAATATTTACACAAAAAAGGAATCATACATGGGGACATTAAGGGAGCAAATATCCTTGTTGATAATAAAGGGCGCATTAAACTAGCAGATTTTGGTGCATCCAAACAGGCAGCCCTTTCAGGTGCAAAGCCTACAAGGGGTACACCATACTGGATGGCTCCTGAAGTCATTTGTGGGACTGGTCATGACTTCTCTGCAGATATATGGAGCGTTGGATGCACTGTGATTGAGATGACCACTGGAAATCCTCCTTGGAACCAACAGTTTGAAGCGGTTGCTACTTTCTTTTATTGTGTAGGGACAAGCAAGTCTCATCCACCAATCCCTGATCATCTTTCTCCTGCAGCAAAAGATTTTCTGCACAAATGTCTGCAAAAGGAACCAACTGTAAGGCCATCCGCATCTGAGTTGCTTAAGCATCCTTTTTTAACTGGGAAAGAAGTGGAATCTCAGAATTCTGCAGTCATGGAAGTAGAAGTAGCATCCTCATTTTGCCAAACAAATTCTGACGAAATTGATAGCATGTGGGACGATGATGCAAACTCCAATTTTGTATCCAATCCAGCAAGTGGCGGAACTAGAAAATTGATTGTGCAGGGAGCCATTAAACAAGTGTTTTCAAATTTTTTTAAATTCTTTAAGAGGTCGAGAAGAACTACAAGAAATGGACCAGCGAAGGGTAAGTTCAGCTTTGCATCTATCAAGGATGCCACACACAACTTTTCTGAGGAAAATTTGATTGGACGAGGGGGATTTGGACCTGTTTATAAGGGAAAATTGGTGACCGGACAAGAAGTAGCTGTGAAAAGCCTTTCATCATCTTCACATCAAGGAGATAAGGAGTTTAAGAATGAACTGAGACTCATGCAGAAACTCCAACATAGAAACATTATTCAGATGTTAGGATTTTGCATTCATGGTGGCGGAAGATGTATAATATACGAGTACATGGCAAACACAAGTTTAAACAACCATTTATTTGGTTCATCCAGTGACTTGCTACTAGATTGGAATAAGCGTTTCAACATAATTGAAGGAATTGCTCAAGGATTGGTTTACTTGCACAAATACTCCAGATTGAGAGTAATTCATAGAGATATAAAAGCCAGTAATGTTCTACTGGATGCACAAATGAATCCCAAAATTGCTGATTTTGGTTTAGCAAAAATTTTTGCAGATGATGAAGAGACGGTAAAAATTACGGAAATTTGTGGGACAATCGGTTACATGCCTCCCGAGTACCTCATAACAGGCATCCTTTCCATGAAAACCGATGTCTACAGTTATGGAGTGTTAATGCTTGAAATCATAAGCGGTAACAAAAATTTCAATGCTGACGGCGATTATTTGGTAAAAGATGCACGGCAGTTATGGCAAAAAGGTGCAGGGCTACAACTAGTGGATCCAAAACTGGAAGTTTCTCGTATTAACAAACATCAACTGTTAAGATGCATCCATGTTGGTCTGCTGTGCGCGGAAGAAAATGAAGATGACCGGCCCACCATGTCAGATGCGATATCTATGTTGAAAAATGAAGTGCCTTTGCCTGAACCAACAATGCCAGCATTTTCTAGATACAGTAATCGGACAACTGCTAGTATAGATGAAAATGGACCGGAAACTATGTCCATGTATGGTTTATCAATAAACAGTATGACGATTTCCGACTTTGGTGGACGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

681

Amino Acids

75.43

Weight (kDa)

6.67

Isoelectric Point (pI)

35.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 15 - 264 9.3e-64 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 17 - 260 4.2e-38 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 49 - 157 3e-06 ABC1 atypical kinase-like domain
Pkinase PF00069 363 - 627 8.8e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 365 - 626 3.8e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1131
AasI GACNNNNNNGTC 1 cut(s) 670
AccB7I CCANNNNNTGG 1 cut(s) 932
AccI GTMKAC 1 cut(s) 1641
AccII CGCG 1 cut(s) 1838
AccIII TCCGGA 1 cut(s) 107
AciI CCGC 6 cut(s) 635, 762, 936, 1287, 1677, 1838
AclWI GGATC 5 cut(s) 258, 271, 301, 1760, 1773
AcoI YGGCCR 1 cut(s) 76
AcuI CTGAAG 1 cut(s) 546
AfaI GTAC 4 cut(s) 255, 505, 1310, 1604
AfiI CCNNNNNNNGG 3 cut(s) 500, 932, 1040
AflII CTTAAG 1 cut(s) 776
AhlI ACTAGT 1 cut(s) 1759
AjnI CCWGG 1 cut(s) 256
AjuI GAANNNNNNNTTGG 4 cut(s) 598, 630, 1086, 1118
AluBI AGCT 4 cut(s) 115, 315, 1053, 1163
AluI AGCT 4 cut(s) 115, 315, 1053, 1163
Alw26I GTCTC 4 cut(s) 12, 678, 1216, 1544
AlwI GGATC 5 cut(s) 258, 271, 301, 1760, 1773
AlwNI CAGNNNCTG 1 cut(s) 308
Ama87I CYCGRG 1 cut(s) 1598
Aor13HI TCCGGA 1 cut(s) 107
AoxI GGCC 4 cut(s) 69, 76, 755, 1859
ApeKI GCWGC 3 cut(s) 122, 473, 707
AspLEI GCGC 2 cut(s) 438, 1838
AspS9I GGNCC 5 cut(s) 69, 1031, 1121, 1860, 1976
AsuC2I CCSGG 1 cut(s) 67
AsuHPI GGTGA 2 cut(s) 331, 1156
AvaI CYCGRG 1 cut(s) 1598
AvaII GGWCC 3 cut(s) 1031, 1121, 1976
BamHI GGATCC 2 cut(s) 263, 1765
BbvI GCAGC 3 cut(s) 109, 485, 719
BccI CCATC 2 cut(s) 511, 766
BceAI ACGGC 3 cut(s) 63, 1717, 1742
BciT130I CCWGG 1 cut(s) 258
BciVI GTATCC 1 cut(s) 928
BclI TGATCA 1 cut(s) 691
BcnI CCSGG 1 cut(s) 67
BcoDI GTCTC 4 cut(s) 12, 678, 1216, 1544
BcuI ACTAGT 1 cut(s) 1759
BfaI CTAG 7 cut(s) 362, 446, 942, 1367, 1760, 1935, 1959
BfmI CTRYAG 4 cut(s) 558, 705, 822, 1642
BfrI CTTAAG 1 cut(s) 776
BfuI GTATCC 1 cut(s) 928
BisI GCNGC 3 cut(s) 123, 474, 708
BlsI GCNGC 3 cut(s) 124, 475, 709
Bme1390I CCNGG 2 cut(s) 67, 258
Bme18I GGWCC 3 cut(s) 1031, 1121, 1976
BmeT110I CYCGRG 1 cut(s) 1598
BmgT120I GGNCC 5 cut(s) 69, 1031, 1121, 1860, 1976
BmiI GGNNCC 9 cut(s) 64, 70, 211, 265, 522, 620, 744, 964, 1767
BmrFI CCNGG 2 cut(s) 67, 258
BmrI ACTGGG 1 cut(s) 804
BmuI ACTGGG 1 cut(s) 804
BpmI CTGGAG 2 cut(s) 279, 1420
BpuEI CTTGAG 1 cut(s) 1392
BpuMI CCSGG 1 cut(s) 67
BsaJI CCNNGG 3 cut(s) 66, 141, 614
BsaWI WCCGGW 3 cut(s) 107, 1148, 1978
BsaXI ACNNNNNCTCC 2 cut(s) 1418, 1448
Bsc4I CCNNNNNNNGG 3 cut(s) 500, 932, 1040
Bse118I RCCGGY 1 cut(s) 1857
Bse1I ACTGG 8 cut(s) 518, 547, 607, 799, 1353, 1470, 1488, 1779
BseAI TCCGGA 1 cut(s) 107
BseBI CCWGG 1 cut(s) 258
BseDI CCNNGG 3 cut(s) 66, 141, 614
BseLI CCNNNNNNNGG 3 cut(s) 500, 932, 1040
BseMII CTCAG 5 cut(s) 315, 759, 827, 1080, 1211
BseNI ACTGG 8 cut(s) 518, 547, 607, 799, 1353, 1470, 1488, 1779
BseXI GCAGC 3 cut(s) 109, 485, 719
BsgI GTGCAG 3 cut(s) 707, 977, 1767
Bsh1236I CGCG 1 cut(s) 1838
BshFI GGCC 4 cut(s) 71, 78, 757, 1861
BsiHKCI CYCGRG 1 cut(s) 1598
BsiSI CCGG 5 cut(s) 66, 108, 1149, 1858, 1979
BslFI GGGAC 5 cut(s) 410, 553, 676, 905, 1591
BslI CCNNNNNNNGG 3 cut(s) 500, 932, 1040
BsmAI GTCTC 4 cut(s) 12, 678, 1216, 1544
BsmBI CGTCTC 2 cut(s) 12, 1544
BsmFI GGGAC 5 cut(s) 410, 553, 676, 905, 1591
BsmI GAATGC 1 cut(s) 1275
BsnI GGCC 4 cut(s) 71, 78, 757, 1861
BsoBI CYCGRG 1 cut(s) 1598
Bsp13I TCCGGA 1 cut(s) 107
Bsp143I GATC 5 cut(s) 57, 263, 293, 691, 1765
BspACI CCGC 6 cut(s) 635, 762, 936, 1287, 1677, 1838
BspANI GGCC 4 cut(s) 71, 78, 757, 1861
BspCNI CTCAG 5 cut(s) 314, 760, 826, 1081, 1212
BspEI TCCGGA 1 cut(s) 107
BspFNI CGCG 1 cut(s) 1838
BspHI TCATGA 1 cut(s) 547
BspLI GGNNCC 9 cut(s) 64, 70, 211, 265, 522, 620, 744, 964, 1767
BspMAI CTGCAG 3 cut(s) 562, 709, 826
BspPI GGATC 5 cut(s) 258, 271, 301, 1760, 1773
BspTI CTTAAG 1 cut(s) 776
BsrFI RCCGGY 1 cut(s) 1857
BsrI ACTGG 8 cut(s) 518, 547, 607, 799, 1353, 1470, 1488, 1779
BssAI RCCGGY 1 cut(s) 1857
BssECI CCNNGG 3 cut(s) 66, 141, 614
BssMI GATC 5 cut(s) 57, 263, 293, 691, 1765
BssT1I CCWWGG 2 cut(s) 141, 614
Bst2UI CCWGG 1 cut(s) 258
Bst4CI ACNGT 8 cut(s) 586, 627, 751, 1555, 1646, 1806, 1943, 2015
Bst6I CTCTTC 1 cut(s) 1542
BstAFI CTTAAG 1 cut(s) 776
BstAPI GCANNNNNTGC 1 cut(s) 352
BstC8I GCNNGC 2 cut(s) 357, 1926
BstDEI CTNAG 5 cut(s) 301, 768, 813, 1089, 1220
BstEII GGTNACC 1 cut(s) 1144
BstFNI CGCG 1 cut(s) 1838
BstHHI GCGC 2 cut(s) 438, 1838
BstKTI GATC 5 cut(s) 60, 266, 296, 694, 1768
BstMAI GTCTC 4 cut(s) 12, 678, 1216, 1544
BstMBI GATC 5 cut(s) 57, 263, 293, 691, 1765
BstMWI GCNNNNNNNGC 4 cut(s) 131, 352, 579, 1735
BstNI CCWGG 1 cut(s) 258
BstNSI RCATGY 2 cut(s) 889, 1594
BstPI GGTNACC 1 cut(s) 1144
BstSCI CCNGG 2 cut(s) 65, 256
BstSFI CTRYAG 4 cut(s) 558, 705, 822, 1642
BstUI CGCG 1 cut(s) 1838
BstV1I GCAGC 3 cut(s) 109, 485, 719
BstX2I RGATCY 3 cut(s) 263, 293, 1765
BstXI CCANNNNNNTGG 1 cut(s) 1343
BstYI RGATCY 3 cut(s) 263, 293, 1765
BsuI GTATCC 1 cut(s) 928
BsuRI GGCC 4 cut(s) 71, 78, 757, 1861
BtsIMutI CAGTG 3 cut(s) 582, 600, 1360
Cac8I GCNNGC 2 cut(s) 357, 1926
CaiI CAGNNNCTG 1 cut(s) 308
CciI TCATGA 1 cut(s) 547
CfoI GCGC 2 cut(s) 438, 1838
Cfr10I RCCGGY 1 cut(s) 1857
Cfr13I GGNCC 5 cut(s) 69, 1031, 1121, 1860, 1976
Csp6I GTAC 4 cut(s) 254, 504, 1309, 1603
CviQI GTAC 4 cut(s) 254, 504, 1309, 1603
DdeI CTNAG 5 cut(s) 301, 768, 813, 1089, 1220
DpnI GATC 5 cut(s) 59, 265, 295, 693, 1767
DpnII GATC 5 cut(s) 57, 263, 293, 691, 1765
DraI TTTAAA 2 cut(s) 994, 1329
DrdI GACNNNNNNGTC 1 cut(s) 670
DseDI GACNNNNNNGTC 1 cut(s) 670
EaeI YGGCCR 1 cut(s) 76
Eam1104I CTCTTC 1 cut(s) 1542
EarI CTCTTC 1 cut(s) 1542
EciI GGCGGA 2 cut(s) 951, 1302
Eco130I CCWWGG 2 cut(s) 141, 614
Eco32I GATATC 1 cut(s) 1881
Eco47I GGWCC 3 cut(s) 1031, 1121, 1976
Eco57I CTGAAG 1 cut(s) 546
Eco88I CYCGRG 1 cut(s) 1598
Eco91I GGTNACC 1 cut(s) 1144
EcoO109I RGGNCCY 1 cut(s) 69
EcoO65I GGTNACC 1 cut(s) 1144
EcoRI GAATTC 1 cut(s) 817
EcoRII CCWGG 1 cut(s) 256
EcoRV GATATC 1 cut(s) 1881
EcoT14I CCWWGG 2 cut(s) 141, 614
EcoT22I ATGCAT 1 cut(s) 1817
ErhI CCWWGG 2 cut(s) 141, 614
Esp3I CGTCTC 2 cut(s) 12, 1544
FalI AAGNNNNNCTT 4 cut(s) 150, 182, 1037, 1069
FaqI GGGAC 5 cut(s) 410, 553, 676, 905, 1591
FbaI TGATCA 1 cut(s) 691
FblI GTMKAC 1 cut(s) 1641
Fnu4HI GCNGC 3 cut(s) 123, 474, 708
Fsp4HI GCNGC 3 cut(s) 123, 474, 708
FspBI CTAG 7 cut(s) 362, 446, 942, 1367, 1760, 1935, 1959
GlaI GCGC 2 cut(s) 437, 1837
GluI GCNGC 3 cut(s) 123, 474, 708
GsuI CTGGAG 2 cut(s) 279, 1420
HaeIII GGCC 4 cut(s) 71, 78, 757, 1861
HapII CCGG 5 cut(s) 66, 108, 1149, 1858, 1979
HhaI GCGC 2 cut(s) 438, 1838
Hin6I GCGC 2 cut(s) 436, 1836
HinP1I GCGC 2 cut(s) 436, 1836
HindIII AAGCTT 1 cut(s) 313
HinfI GANTC 6 cut(s) 34, 104, 384, 809, 1224, 1498
HpaII CCGG 5 cut(s) 66, 108, 1149, 1858, 1979
HphI GGTGA 2 cut(s) 331, 1156
Hpy166II GTNNAC 5 cut(s) 85, 506, 1420, 1642, 2039
Hpy188I TCNGA 9 cut(s) 189, 769, 816, 871, 1090, 1260, 1873, 1950, 2029
Hpy188III TCNNGA 8 cut(s) 108, 152, 524, 548, 1011, 1437, 1598, 1935
Hpy8I GTNNAC 5 cut(s) 85, 506, 1420, 1642, 2039
HpyAV CCTTC 3 cut(s) 40, 1033, 1391
HpyCH4III ACNGT 8 cut(s) 586, 627, 751, 1555, 1646, 1806, 1943, 2015
HpyCH4IV ACGT 1 cut(s) 2041
HpyF10VI GCNNNNNNNGC 4 cut(s) 131, 352, 579, 1735
HpyF3I CTNAG 5 cut(s) 301, 768, 813, 1089, 1220
HpySE526I ACGT 1 cut(s) 2041
HspAI GCGC 2 cut(s) 436, 1836
Kpn2I TCCGGA 1 cut(s) 107
Ksp22I TGATCA 1 cut(s) 691
Kzo9I GATC 5 cut(s) 57, 263, 293, 691, 1765
LmnI GCTCC 4 cut(s) 407, 526, 570, 962
Lsp1109I GCAGC 3 cut(s) 109, 485, 719
MaeI CTAG 7 cut(s) 362, 446, 942, 1367, 1760, 1935, 1959
MaeII ACGT 1 cut(s) 2041
MaeIII GTNAC 4 cut(s) 1144, 1355, 1586, 1679
MalI GATC 5 cut(s) 59, 265, 295, 693, 1767
MboI GATC 5 cut(s) 57, 263, 293, 691, 1765
MboII GAAGA 6 cut(s) 1026, 1176, 1302, 1559, 1853, 1862
MflI RGATCY 3 cut(s) 263, 293, 1765
MlyI GAGTC 1 cut(s) 1218
MmeI TCCRAC 3 cut(s) 225, 556, 1264
Mph1103I ATGCAT 1 cut(s) 1817
MroI TCCGGA 1 cut(s) 107
MslI CAYNNNNRTG 1 cut(s) 92
MspCI CTTAAG 1 cut(s) 776
MspI CCGG 5 cut(s) 66, 108, 1149, 1858, 1979
MspR9I CCNGG 2 cut(s) 67, 258
MssI GTTTAAAC 1 cut(s) 1329
Mva1269I GAATGC 1 cut(s) 1275
MvaI CCWGG 1 cut(s) 258
MvnI CGCG 1 cut(s) 1838
MwoI GCNNNNNNNGC 4 cut(s) 131, 352, 579, 1735
NciI CCSGG 1 cut(s) 67
NdeII GATC 5 cut(s) 57, 263, 293, 691, 1765
NlaIV GGNNCC 9 cut(s) 64, 70, 211, 265, 522, 620, 744, 964, 1767
NmuCI GTSAC 2 cut(s) 1144, 1355
NsiI ATGCAT 1 cut(s) 1817
NspI RCATGY 2 cut(s) 889, 1594
PagI TCATGA 1 cut(s) 547
PctI GAATGC 1 cut(s) 1275
PfeI GAWTC 5 cut(s) 34, 104, 384, 809, 1498
PflMI CCANNNNNTGG 1 cut(s) 932
PkrI GCNGC 3 cut(s) 124, 475, 709
PleI GAGTC 1 cut(s) 1218
PmeI GTTTAAAC 1 cut(s) 1329
PpsI GAGTC 1 cut(s) 1218
PsiI TTATAA 1 cut(s) 1131
Psp6I CCWGG 1 cut(s) 256
PspEI GGTNACC 1 cut(s) 1144
PspGI CCWGG 1 cut(s) 256
PspN4I GGNNCC 9 cut(s) 64, 70, 211, 265, 522, 620, 744, 964, 1767
PspPI GGNCC 5 cut(s) 69, 1031, 1121, 1860, 1976
PstI CTGCAG 3 cut(s) 562, 709, 826
PstNI CAGNNNCTG 1 cut(s) 308
PsuI RGATCY 3 cut(s) 263, 293, 1765
RsaI GTAC 4 cut(s) 255, 505, 1310, 1604
RsaNI GTAC 4 cut(s) 254, 504, 1309, 1603
RseI CAYNNNNRTG 1 cut(s) 92
SatI GCNGC 3 cut(s) 123, 474, 708
Sau3AI GATC 5 cut(s) 57, 263, 293, 691, 1765
Sau96I GGNCC 5 cut(s) 69, 1031, 1121, 1860, 1976
SchI GAGTC 1 cut(s) 1218
ScrFI CCNGG 2 cut(s) 67, 258
SfcI CTRYAG 4 cut(s) 558, 705, 822, 1642
SinI GGWCC 3 cut(s) 1031, 1121, 1976
SmiMI CAYNNNNRTG 1 cut(s) 92
SmlI CTYRAG 2 cut(s) 776, 1407
SmoI CTYRAG 2 cut(s) 776, 1407
SpeI ACTAGT 1 cut(s) 1759
SsiI CCGC 6 cut(s) 635, 762, 936, 1287, 1677, 1838
SspI AATATT 1 cut(s) 368
SspMI CTAG 7 cut(s) 362, 446, 942, 1367, 1760, 1935, 1959
StyD4I CCNGG 2 cut(s) 65, 256
StyI CCWWGG 2 cut(s) 141, 614
TaaI ACNGT 8 cut(s) 586, 627, 751, 1555, 1646, 1806, 1943, 2015
TaiI ACGT 1 cut(s) 2044
TaqI TCGA 2 cut(s) 32, 1010
TatI WGTACW 1 cut(s) 1308
TfiI GAWTC 5 cut(s) 34, 104, 384, 809, 1498
TscAI CASTG 3 cut(s) 589, 607, 1360
TseFI GTSAC 2 cut(s) 1144, 1355
TseI GCWGC 3 cut(s) 122, 473, 707
Tsp45I GTSAC 2 cut(s) 1144, 1355
TspGWI ACGGA 1 cut(s) 1580
TspRI CASTG 3 cut(s) 589, 607, 1360
Van91I CCANNNNNTGG 1 cut(s) 932
Vha464I CTTAAG 1 cut(s) 776
VpaK11BI GGWCC 3 cut(s) 1031, 1121, 1976
XbaI TCTAGA 1 cut(s) 1934
XceI RCATGY 2 cut(s) 889, 1594
XmiI GTMKAC 1 cut(s) 1641
XspI CTAG 7 cut(s) 362, 446, 942, 1367, 1760, 1935, 1959
Zsp2I ATGCAT 1 cut(s) 1817
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.