Rh5CG187100

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000922
Physical Location & Seq
Reverse (-)
18669703 .. 18670867
1165 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG187100.1

Sequence Viewer

Length: 201 bp
ATGTCTTCAATCCAATGGCGGAAGGGCGATTTGATCGGTTCAGGGACCTTTGGCCGTGTTTACATGGGCATGGATACTGAATCCGGAGCGCTCATTGCTGCTAAAGAGGCAACCAGTTCTTCTGCAAAGCCTACAAGGGGTACGCCATATTGGATGGCTCCTGAAGTCGTTCGTGGGACTGGTCATAACTTGTACGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04016 map04016
Pfam Domains
Protein Families
Pkinase

Protein Analysis

66

Amino Acids

7.05

Weight (kDa)

9.3

Isoelectric Point (pI)

41.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 83
AciI CCGC 1 cut(s) 19
AcoI YGGCCR 1 cut(s) 52
AcuI CTGAAG 1 cut(s) 183
AfaI GTAC 2 cut(s) 142, 194
AfeI AGCGCT 1 cut(s) 90
AfiI CCNNNNNNNGG 1 cut(s) 137
AgsI TTSAA 1 cut(s) 9
Aor13HI TCCGGA 1 cut(s) 83
Aor51HI AGCGCT 1 cut(s) 90
AoxI GGCC 1 cut(s) 52
ApeKI GCWGC 1 cut(s) 98
Asp700I GAANNNNTTC 1 cut(s) 168
AspLEI GCGC 1 cut(s) 91
AspS9I GGNCC 1 cut(s) 45
AvaII GGWCC 1 cut(s) 45
BbvI GCAGC 1 cut(s) 85
BccI CCATC 1 cut(s) 148
BceAI ACGGC 1 cut(s) 39
BciVI GTATCC 1 cut(s) 67
BfoI RGCGCY 1 cut(s) 92
BfuI GTATCC 1 cut(s) 67
BisI GCNGC 1 cut(s) 99
BlsI GCNGC 1 cut(s) 100
Bme18I GGWCC 1 cut(s) 45
BmgT120I GGNCC 1 cut(s) 45
BmiI GGNNCC 2 cut(s) 46, 159
BsaWI WCCGGW 1 cut(s) 83
Bsc4I CCNNNNNNNGG 1 cut(s) 137
Bse1I ACTGG 2 cut(s) 114, 184
Bse3DI GCAATG 1 cut(s) 93
BseAI TCCGGA 1 cut(s) 83
BseGI GGATG 1 cut(s) 159
BseLI CCNNNNNNNGG 1 cut(s) 137
BseMI GCAATG 1 cut(s) 93
BseNI ACTGG 2 cut(s) 114, 184
BseXI GCAGC 1 cut(s) 85
BshFI GGCC 1 cut(s) 54
BsiSI CCGG 1 cut(s) 84
BslFI GGGAC 2 cut(s) 58, 190
BslI CCNNNNNNNGG 1 cut(s) 137
BsmFI GGGAC 2 cut(s) 58, 190
BsnI GGCC 1 cut(s) 54
Bsp13I TCCGGA 1 cut(s) 83
Bsp143I GATC 1 cut(s) 33
BspACI CCGC 1 cut(s) 19
BspANI GGCC 1 cut(s) 54
BspEI TCCGGA 1 cut(s) 83
BspLI GGNNCC 2 cut(s) 46, 159
BsrDI GCAATG 1 cut(s) 93
BsrI ACTGG 2 cut(s) 114, 184
BssMI GATC 1 cut(s) 33
BstF5I GGATG 1 cut(s) 159
BstH2I RGCGCY 1 cut(s) 92
BstHHI GCGC 1 cut(s) 91
BstKTI GATC 1 cut(s) 36
BstMBI GATC 1 cut(s) 33
BstMWI GCNNNNNNNGC 2 cut(s) 95, 107
BstV1I GCAGC 1 cut(s) 85
BsuI GTATCC 1 cut(s) 67
BsuRI GGCC 1 cut(s) 54
BtsCI GGATG 1 cut(s) 159
CfoI GCGC 1 cut(s) 91
Cfr13I GGNCC 1 cut(s) 45
Csp6I GTAC 2 cut(s) 141, 193
CviAII CATG 2 cut(s) 64, 70
CviJI RGCY 3 cut(s) 54, 130, 158
CviKI_1 RGCY 3 cut(s) 54, 130, 158
CviQI GTAC 2 cut(s) 141, 193
DpnI GATC 1 cut(s) 35
DpnII GATC 1 cut(s) 33
EaeI YGGCCR 1 cut(s) 52
EciI GGCGGA 1 cut(s) 34
Eco47I GGWCC 1 cut(s) 45
Eco47III AGCGCT 1 cut(s) 90
Eco57I CTGAAG 1 cut(s) 183
EcoO109I RGGNCCY 1 cut(s) 45
FaeI CATG 2 cut(s) 67, 73
FaiI YATR 5 cut(s) 65, 71, 148, 186, 199
FaqI GGGAC 2 cut(s) 58, 190
FatI CATG 2 cut(s) 63, 69
Fnu4HI GCNGC 1 cut(s) 99
FokI GGATG 1 cut(s) 166
Fsp4HI GCNGC 1 cut(s) 99
GlaI GCGC 1 cut(s) 90
GluI GCNGC 1 cut(s) 99
HaeII RGCGCY 1 cut(s) 92
HaeIII GGCC 1 cut(s) 54
HapII CCGG 1 cut(s) 84
HhaI GCGC 1 cut(s) 91
Hin1II CATG 2 cut(s) 67, 73
Hin6I GCGC 1 cut(s) 89
HinP1I GCGC 1 cut(s) 89
HinfI GANTC 1 cut(s) 80
HpaII CCGG 1 cut(s) 84
Hpy166II GTNNAC 1 cut(s) 61
Hpy188III TCNNGA 2 cut(s) 84, 161
Hpy8I GTNNAC 1 cut(s) 61
HpyAV CCTTC 1 cut(s) 16
HpyCH4V TGCA 1 cut(s) 125
HpyF10VI GCNNNNNNNGC 2 cut(s) 95, 107
Hsp92II CATG 2 cut(s) 67, 73
HspAI GCGC 1 cut(s) 89
Kpn2I TCCGGA 1 cut(s) 83
Kzo9I GATC 1 cut(s) 33
LmnI GCTCC 2 cut(s) 86, 163
LpnPI CCDG 5 cut(s) 27, 97, 127, 165, 174
Lsp1109I GCAGC 1 cut(s) 85
MalI GATC 1 cut(s) 35
MboI GATC 1 cut(s) 33
MboII GAAGA 1 cut(s) 111
MnlI CCTC 1 cut(s) 100
MroI TCCGGA 1 cut(s) 83
MroXI GAANNNNTTC 1 cut(s) 168
MslI CAYNNNNRTG 1 cut(s) 68
MspI CCGG 1 cut(s) 84
MwoI GCNNNNNNNGC 2 cut(s) 95, 107
NdeII GATC 1 cut(s) 33
NlaIII CATG 2 cut(s) 67, 73
NlaIV GGNNCC 2 cut(s) 46, 159
PdmI GAANNNNTTC 1 cut(s) 168
PfeI GAWTC 1 cut(s) 80
PkrI GCNGC 1 cut(s) 100
PpuMI RGGWCCY 1 cut(s) 45
Psp5II RGGWCCY 1 cut(s) 45
PspN4I GGNNCC 2 cut(s) 46, 159
PspPI GGNCC 1 cut(s) 45
PspPPI RGGWCCY 1 cut(s) 45
RsaI GTAC 2 cut(s) 142, 194
RsaNI GTAC 2 cut(s) 141, 193
RseI CAYNNNNRTG 1 cut(s) 68
SatI GCNGC 1 cut(s) 99
Sau3AI GATC 1 cut(s) 33
Sau96I GGNCC 1 cut(s) 45
SetI ASST 1 cut(s) 50
SinI GGWCC 1 cut(s) 45
SmiMI CAYNNNNRTG 1 cut(s) 68
SsiI CCGC 1 cut(s) 19
TfiI GAWTC 1 cut(s) 80
TseI GCWGC 1 cut(s) 98
VpaK11BI GGWCC 1 cut(s) 45
XmnI GAANNNNTTC 1 cut(s) 168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.