Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000922

Physical Location & Seq

Genomic Coordinates Forward (+)

3295764 .. 3303127

Gene Structure 7364 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g05800.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGCAAGACATCTTCGGATCAGTCCGCCGATCACTCGTGTTCCGGCCACCGGACACCGACGACTCCCCGGTAACCCTAGTCGACAAGATCACCGCCTCCCTTCGGAAATCCCGAGTCTTCTCCAAACCCTCCCCGCCGCCGCCGTCCTCCTCCGTCCCTAAAGAGACCGCGCCTCCGATCCGATGGCGCAAAGGCGAGTTGATCGGCTGCGGCGCCTTCGGCCGCGTCTACATGGGCATGAATCTCGGCTCCGGCGAGCTTCTGGCCGTTAAGCAGGTTCTTATCGCAGTGAACAGCAAGGAGAAAGCTCAGGCTCACATCAAGGAGCTTGAGGAAGAAGTGAAGCTTCTGAAGAATCTATCTCATCCAAACATTGTTAGATATTTGGGTACAGTGAGGGAGGAGGAAACCTTGAACATTCTGTTGGAGTTTGTCCCTGGTGGATCTATATCATCACTTTTGGGAAAATTTGGATCTTTCCCTGAGGCTGTAATGAGAACATACACCAAGCAGTTGTTGTTGGGATTAGAATATTTACACAAAAATGGAATAATGCACAGGGACATTAAGGGAGCAAATATCCTTGTTGATAACAAAGGATGCATTAAGCTTGCAGATTTTGGTGCATCCAAACAGGTGGTGGAGCTGGCAACAATTTCTGGTGCTAAGTCTATGAAGGGTACGCCATACTGGATGGCTCCTGAAGTTATTCGTCAGACTGGTCATAGCTTCTCTGCTGATATATGGAGTGTTGGATGTACTGTGATCGAGATGGCCACCGGAAAGCCTCCTTGGAGCGAAAAGTACCAAGAGGTTGCTGCTCTCTTCCATATAGGGACAACAAAGTCTCATCCACCAATCCCTGAGCACATTTCCTTTGAGGCGAAAGACTTTTTGTTAAAATGTCTGCACAAGGAGCCAAATTTGAGGCCGACGGCATCTGAGTTGCTTCAGCATCCATTTGTGACTGGGCAACCCATGGAATTTCATACTGTTTTGCGTCCTTCTATCATGGAAGATTCTGAGATCCCTTCTCCATCATATTCTTCAAACCTACAGACCTTTGAGATGTCGACATGCCGAGATTCATCTGATATGTGTACTATGGATAGTTTGCACTGCTCAACCATACATCCTGACAGGGTGTTGGAAAGTACACACATTTGGAGAAGAGACAGTGATGATGACATGTGTCAGATTGATGACAAAGATGATGTTATGGTCGGTGAAGTAAACCTCAATTCTTTCTATATGCCCGACGACCTTAAGAGCTTTAACCCCATGTGCGAGCCCACTGATGATATGAGGTGCCAATTTCACCGAAGTTCAGAAACCGAACAAAATGTCAGGAATCTGGATACTAGCCACCAAATTGATATCCATGCTGGCTGTTCTGGAACAATTGGTGCGGATGAAAAAGATTTTTCATTTCCTTGTGGTCGATCTCTTTCGGAGGATGATGATGAGCTTACTGAATCGAAAATTACTGCGTTCTTGGATGAAAAGGCTCTGGAACTGAAGAAACTGCAAACACCTCTTTACGAAGAGTTTTACAACAGCATGAATGTAGTGGGTTCTCCAAGTTTTGTGGATAGCTCACCTGATGAAACTACTTCGAAGTACTTGAAATTACCTCCCAAAAGCAGATCACCCATACGTAGTCCAATTGGCACTCCATCTGCAGTAGCTGATGCACTTGGTACTGTAAGCCCTGGGAGTAGTGGTAGGCGCGTATCAAATATTGGTAATGCGAGCAATCAAAACTTAAAGGACATGTCATCACCTCCTCACACTGATCGGAAAGGGTTTGGAGTTGATGCTCAGCAAGAGCCAGGCAGCCCAAGTATGAGCTTCTCTGAGATACAAAGGAAGTGGAAAGAAGAGCTTGATCAGGAGCTAGAGAGAAAGCGAGAGATGATGCGTCAAGCAGGTGTAGGGAAAACATCATCGCCAAAAGATCGAGCTCTAAATAAGCAGAGAGAGCGGACAAGGTTTGCATCTCCAGGCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000165 GO:0000186 GO:0000226 GO:0001932 GO:0001934 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004709 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0006996 GO:0007010 GO:0007017 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019220 GO:0019222 GO:0019538 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0030865 GO:0031098 GO:0031122 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0033554 GO:0033674 GO:0035556 GO:0036211 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043549 GO:0043622 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0046777 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071840 GO:0071900 GO:0071902 GO:0080090 GO:0097435 GO:0140096 GO:1901564 GO:1902531 GO:1902533

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

671

Amino Acids

74.5

Weight (kDa)

5.97

Isoelectric Point (pI)

57.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	63 - 322	8.2e-75	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	65 - 318	2.5e-48	Protein tyrosine and serine/threonine kinase
Pkinase_fungal	PF17667	175 - 250	1.2e-06	Fungal protein kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000922)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09000 AT1G09000 AT1G54960 AT1G54960
fragaria_vesca	FvH4_2g08110 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14780 FvH4_3g14790 FvH4_4g12990 FvH4_4g34210 FvH4_6g05800 FvH4_6g05800
malus_domestica	MD04G1205500.v1.1 MD12G1219600.v1.1
prunus_persica	Prupe.6G326300_v2.0.a1 Prupe.6G326300_v2.0.a1 Prupe.6G326300_v2.0.a1
pyrus_communis	pycom04g18180 pycom12g20510
rosa_chinensis	RchiOBHm_Chr3g0454721 RchiOBHm_Chr5g0024321 RchiOBHm_Chr5g0024331 RchiOBHm_Chr5g0024401 RchiOBHm_Chr5g0025361
rosa_laevigata	RLG00000032792 RLG00000032796
rosa_multiflora	Rmu_co7974142.1_g000001 Rmu_co8231501.1_g000001 Rmu_co8476593.1_g000001 Rmu_sc0005861.1_g000005 Rmu_sc0014903.1_g000002 Rmu_sc0015218.1_g000003
rosa_roxburghii	Rroxscaffold_1G00054820 Rroxscaffold_1G00054830 Rroxscaffold_1G00055870 Rroxscaffold_6G00424830
rosa_rugosa	Rorug03G0001600 Rorug05G0083100
rosa_samantha	Rh3AG061400 Rh3AG061600 Rh3BG063200 Rh3BG063400 Rh3CG062100 Rh3CG062300 Rh3DG063100 Rh5AG173900 Rh5AG174200 Rh5BG171100 Rh5BG171800 Rh5CG187000 Rh5CG187100 Rh5CG187200 Rh5DG173300 Rh5DG245400
rosa_wichuraiana	Rw3G004800 Rw5G015780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1919
AasI	GACNNNNNNGTC	1 cut(s)	844
Acc36I	ACCTGC	2 cut(s)	265, 1919
AccB1I	GGYRCC	2 cut(s)	212, 1308
AccBSI	CCGCTC	1 cut(s)	1984
AccI	GTMKAC	3 cut(s)	81, 228, 1073
AccII	CGCG	3 cut(s)	170, 225, 1731
AclWI	GGATC	5 cut(s)	25, 172, 451, 481, 1021
AcoI	YGGCCR	4 cut(s)	44, 220, 264, 774
AcsI	RAATTY	3 cut(s)	467, 922, 983
AcuI	CTGAAG	4 cut(s)	371, 723, 935, 1538
AcyI	GRCGYC	1 cut(s)	213
AfaI	GTAC	8 cut(s)	391, 682, 760, 806, 1102, 1156, 1622, 1702
AfiI	CCNNNNNNNGG	2 cut(s)	49, 102
AflII	CTTAAG	1 cut(s)	1265
AflIII	ACRYGT	2 cut(s)	1188, 1773
AgsI	TTSAA	3 cut(s)	415, 1050, 1627
AjnI	CCWGG	4 cut(s)	436, 1711, 1831, 2002
AjuI	GAANNNNNNNTTGG	4 cut(s)	407, 439, 775, 807
Alw21I	GWGCWC	2 cut(s)	870, 1966
Alw26I	GTCTC	3 cut(s)	158, 852, 1167
AlwI	GGATC	5 cut(s)	25, 172, 451, 481, 1021
AlwNI	CAGNNNCTG	1 cut(s)	1688
Ama87I	CYCGRG	1 cut(s)	111
AoxI	GGCC	5 cut(s)	44, 220, 264, 774, 929
ApeKI	GCWGC	3 cut(s)	207, 818, 1836
ApoI	RAATTY	3 cut(s)	467, 922, 983
ArsI	GACNNNNNNTTYG	2 cut(s)	1329, 1361
Asp700I	GAANNNNTTC	1 cut(s)	708
AspLEI	GCGC	4 cut(s)	172, 189, 215, 1731
AsuC2I	CCSGG	1 cut(s)	68
AsuHPI	GGTGA	6 cut(s)	82, 1238, 1310, 1590, 1641, 1773
AsuII	TTCGAA	1 cut(s)	1616
AvaI	CYCGRG	1 cut(s)	111
AxyI	CCTNAGG	1 cut(s)	483
BalI	TGGCCA	1 cut(s)	776
BanI	GGYRCC	2 cut(s)	212, 1308
BanII	GRGCYC	2 cut(s)	1293, 1966
BauI	CACGAG	1 cut(s)	35
BbsI	GAAGAC	1 cut(s)	109
Bbv12I	GWGCWC	2 cut(s)	870, 1966
BbvI	GCAGC	3 cut(s)	194, 805, 1848
BccI	CCATC	5 cut(s)	177, 688, 766, 1045, 1684
BceAI	ACGGC	3 cut(s)	127, 251, 951
BcgI	CGANNNNNNTGC	2 cut(s)	226, 260
BciT130I	CCWGG	4 cut(s)	438, 1713, 1833, 2004
BciVI	GTATCC	1 cut(s)	1351
BclI	TGATCA	1 cut(s)	1888
BcnI	CCSGG	1 cut(s)	68
BcoDI	GTCTC	3 cut(s)	158, 852, 1167
BfaI	CTAG	3 cut(s)	77, 1362, 1898
BfmI	CTRYAG	2 cut(s)	1055, 1680
BfoI	RGCGCY	1 cut(s)	216
BfrI	CTTAAG	1 cut(s)	1265
BfuAI	ACCTGC	2 cut(s)	265, 1919
BfuI	GTATCC	1 cut(s)	1351
BisI	GCNGC	7 cut(s)	137, 140, 208, 211, 223, 819, 1837
BlpI	GCTNAGC	1 cut(s)	1821
BlsI	GCNGC	7 cut(s)	138, 141, 209, 212, 224, 820, 1838
BmcAI	AGTACT	1 cut(s)	1622
Bme1390I	CCNGG	5 cut(s)	68, 438, 1713, 1833, 2004
BmeT110I	CYCGRG	1 cut(s)	111
BmiI	GGNNCC	5 cut(s)	214, 250, 699, 918, 1310
BmrFI	CCNGG	5 cut(s)	68, 438, 1713, 1833, 2004
BmrI	ACTGGG	1 cut(s)	978
BmsI	GCATC	8 cut(s)	590, 635, 947, 964, 1681, 1807, 1908, 2006
BmuI	ACTGGG	1 cut(s)	978
BoxI	GACNNNNGTC	1 cut(s)	1191
BpiI	GAAGAC	1 cut(s)	109
BpmI	CTGGAG	1 cut(s)	1986
Bpu10I	CCTNAGC	2 cut(s)	309, 864
Bpu1102I	GCTNAGC	1 cut(s)	1821
Bpu14I	TTCGAA	1 cut(s)	1616
BpuEI	CTTGAG	1 cut(s)	350
BpuMI	CCSGG	1 cut(s)	68
BsaAI	YACGTR	1 cut(s)	1658
BsaBI	GATNNNNATC	1 cut(s)	448
BsaHI	GRCGYC	1 cut(s)	213
BsaI	GGTCTC	1 cut(s)	158
BsaJI	CCNNGG	6 cut(s)	66, 436, 791, 978, 1711, 1712
BsaWI	WCCGGW	2 cut(s)	49, 779
BsaXI	ACNNNNNCTCC	4 cut(s)	157, 187, 1708, 1738
Bsc4I	CCNNNNNNNGG	2 cut(s)	49, 102
Bse1I	ACTGG	3 cut(s)	695, 724, 973
Bse21I	CCTNAGG	1 cut(s)	483
Bse8I	GATNNNNATC	1 cut(s)	448
BseBI	CCWGG	4 cut(s)	438, 1713, 1833, 2004
BseDI	CCNNGG	6 cut(s)	66, 436, 791, 978, 1711, 1712
BseJI	GATNNNNATC	1 cut(s)	448
BseLI	CCNNNNNNNGG	2 cut(s)	49, 102
BseMII	CTCAG	7 cut(s)	323, 474, 855, 933, 1014, 1835, 1848
BseNI	ACTGG	3 cut(s)	695, 724, 973
BseRI	GAGGAG	3 cut(s)	139, 416, 1776
BseX3I	CGGCCG	1 cut(s)	220
BseXI	GCAGC	3 cut(s)	194, 805, 1848
BsgI	GTGCAG	1 cut(s)	893
Bsh1236I	CGCG	3 cut(s)	170, 225, 1731
Bsh1285I	CGRYCG	1 cut(s)	223
BshFI	GGCC	5 cut(s)	46, 222, 266, 776, 931
BshNI	GGYRCC	2 cut(s)	212, 1308
BsiEI	CGRYCG	1 cut(s)	223
BsiHKAI	GWGCWC	2 cut(s)	870, 1966
BsiHKCI	CYCGRG	1 cut(s)	111
BsiSI	CCGG	5 cut(s)	43, 50, 68, 252, 780
BslFI	GGGAC	4 cut(s)	140, 419, 575, 850
BslI	CCNNNNNNNGG	2 cut(s)	49, 102
BsmAI	GTCTC	3 cut(s)	158, 852, 1167
BsmFI	GGGAC	4 cut(s)	140, 419, 575, 850
BsnI	GGCC	5 cut(s)	46, 222, 266, 776, 931
Bso31I	GGTCTC	1 cut(s)	158
BsoBI	CYCGRG	1 cut(s)	111
Bsp119I	TTCGAA	1 cut(s)	1616
Bsp1286I	GDGCHC	3 cut(s)	870, 1293, 1966
Bsp1720I	GCTNAGC	1 cut(s)	1821
Bsp19I	CCATGG	1 cut(s)	978
BspANI	GGCC	5 cut(s)	46, 222, 266, 776, 931
BspCNI	CTCAG	7 cut(s)	322, 475, 856, 934, 1015, 1834, 1849
BspFNI	CGCG	3 cut(s)	170, 225, 1731
BspLI	GGNNCC	5 cut(s)	214, 250, 699, 918, 1310
BspMAI	CTGCAG	1 cut(s)	1684
BspMI	ACCTGC	2 cut(s)	265, 1919
BspPI	GGATC	5 cut(s)	25, 172, 451, 481, 1021
BspQI	GCTCTTC	1 cut(s)	1875
BspT104I	TTCGAA	1 cut(s)	1616
BspT107I	GGYRCC	2 cut(s)	212, 1308
BspTI	CTTAAG	1 cut(s)	1265
BspTNI	GGTCTC	1 cut(s)	158
BsrBI	CCGCTC	1 cut(s)	1984
BsrI	ACTGG	3 cut(s)	695, 724, 973
BssECI	CCNNGG	6 cut(s)	66, 436, 791, 978, 1711, 1712
BssNI	GRCGYC	1 cut(s)	213
BssSI	CACGAG	1 cut(s)	35
BssT1I	CCWWGG	2 cut(s)	791, 978
Bst2BI	CACGAG	1 cut(s)	35
Bst2UI	CCWGG	4 cut(s)	438, 1713, 1833, 2004
Bst4CI	ACNGT	5 cut(s)	394, 763, 994, 1178, 1705
Bst6I	CTCTTC	4 cut(s)	830, 1165, 1539, 1875
BstACI	GRCGYC	1 cut(s)	213
BstAFI	CTTAAG	1 cut(s)	1265
BstBAI	YACGTR	1 cut(s)	1658
BstBI	TTCGAA	1 cut(s)	1616
BstC8I	GCNNGC	6 cut(s)	257, 612, 648, 1289, 1387, 1753
BstDEI	CTNAG	8 cut(s)	309, 483, 666, 864, 942, 1023, 1821, 1857
BstDSI	CCRYGG	1 cut(s)	978
BstEII	GGTNACC	1 cut(s)	70
BstFNI	CGCG	3 cut(s)	170, 225, 1731
BstH2I	RGCGCY	1 cut(s)	216
BstHHI	GCGC	4 cut(s)	172, 189, 215, 1731
BstMAI	GTCTC	3 cut(s)	158, 852, 1167
BstMCI	CGRYCG	1 cut(s)	223
BstMWI	GCNNNNNNNGC	3 cut(s)	219, 916, 1981
BstNI	CCWGG	4 cut(s)	438, 1713, 1833, 2004
BstNSI	RCATGY	3 cut(s)	1080, 1192, 1777
BstPAI	GACNNNNGTC	1 cut(s)	1191
BstPI	GGTNACC	1 cut(s)	70
BstSCI	CCNGG	5 cut(s)	66, 436, 1711, 1831, 2002
BstSFI	CTRYAG	2 cut(s)	1055, 1680
BstSNI	TACGTA	1 cut(s)	1658
BstUI	CGCG	3 cut(s)	170, 225, 1731
BstV1I	GCAGC	3 cut(s)	194, 805, 1848
BstV2I	GAAGAC	1 cut(s)	109
BstX2I	RGATCY	3 cut(s)	443, 473, 1026
BstXI	CCANNNNNNTGG	1 cut(s)	637
BstYI	RGATCY	3 cut(s)	443, 473, 1026
BstZI	CGGCCG	1 cut(s)	220
Bsu36I	CCTNAGG	1 cut(s)	483
BsuI	GTATCC	1 cut(s)	1351
BsuRI	GGCC	5 cut(s)	46, 222, 266, 776, 931
BtgI	CCRYGG	1 cut(s)	978
BtgZI	GCGATG	1 cut(s)	1932
BtsI	GCAGTG	2 cut(s)	294, 1117
BtsIMutI	CAGTG	6 cut(s)	294, 399, 1117, 1183, 1293, 1791
BveI	ACCTGC	2 cut(s)	265, 1919
Cac8I	GCNNGC	6 cut(s)	257, 612, 648, 1289, 1387, 1753
CaiI	CAGNNNCTG	1 cut(s)	1688
CfoI	GCGC	4 cut(s)	172, 189, 215, 1731
CseI	GACGC	3 cut(s)	214, 989, 1910
Csp6I	GTAC	8 cut(s)	390, 681, 759, 805, 1101, 1155, 1621, 1701
CspCI	CAANNNNNGTGG	4 cut(s)	1569, 1604, 1853, 1888
CviQI	GTAC	8 cut(s)	390, 681, 759, 805, 1101, 1155, 1621, 1701
DdeI	CTNAG	8 cut(s)	309, 483, 666, 864, 942, 1023, 1821, 1857
DinI	GGCGCC	1 cut(s)	214
DrdI	GACNNNNNNGTC	1 cut(s)	844
DseDI	GACNNNNNNGTC	1 cut(s)	844
EaeI	YGGCCR	4 cut(s)	44, 220, 264, 774
EagI	CGGCCG	1 cut(s)	220
Eam1104I	CTCTTC	4 cut(s)	830, 1165, 1539, 1875
EarI	CTCTTC	4 cut(s)	830, 1165, 1539, 1875
EciI	GGCGGA	1 cut(s)	14
Ecl136II	GAGCTC	1 cut(s)	1964
EclXI	CGGCCG	1 cut(s)	220
Eco105I	TACGTA	1 cut(s)	1658
Eco130I	CCWWGG	2 cut(s)	791, 978
Eco24I	GRGCYC	2 cut(s)	1293, 1966
Eco31I	GGTCTC	1 cut(s)	158
Eco32I	GATATC	1 cut(s)	1378
Eco52I	CGGCCG	1 cut(s)	220
Eco53kI	GAGCTC	1 cut(s)	1964
Eco57I	CTGAAG	4 cut(s)	371, 723, 935, 1538
Eco81I	CCTNAGG	1 cut(s)	483
Eco88I	CYCGRG	1 cut(s)	111
Eco91I	GGTNACC	1 cut(s)	70
EcoICRI	GAGCTC	1 cut(s)	1964
EcoO65I	GGTNACC	1 cut(s)	70
EcoRII	CCWGG	4 cut(s)	436, 1711, 1831, 2002
EcoRV	GATATC	1 cut(s)	1378
EcoT14I	CCWWGG	2 cut(s)	791, 978
EcoT22I	ATGCAT	1 cut(s)	605
EcoT38I	GRGCYC	2 cut(s)	1293, 1966
EgeI	GGCGCC	1 cut(s)	214
EheI	GGCGCC	1 cut(s)	214
ErhI	CCWWGG	2 cut(s)	791, 978
FalI	AAGNNNNNCTT	4 cut(s)	330, 362, 1869, 1901
FaqI	GGGAC	4 cut(s)	140, 419, 575, 850
FauI	CCCGC	1 cut(s)	141
FbaI	TGATCA	1 cut(s)	1888
FblI	GTMKAC	3 cut(s)	81, 228, 1073
Fnu4HI	GCNGC	7 cut(s)	137, 140, 208, 211, 223, 819, 1837
FriOI	GRGCYC	2 cut(s)	1293, 1966
Fsp4HI	GCNGC	7 cut(s)	137, 140, 208, 211, 223, 819, 1837
FspBI	CTAG	3 cut(s)	77, 1362, 1898
GlaI	GCGC	4 cut(s)	171, 188, 214, 1730
GluI	GCNGC	7 cut(s)	137, 140, 208, 211, 223, 819, 1837
GsuI	CTGGAG	1 cut(s)	1986
HaeII	RGCGCY	1 cut(s)	216
HaeIII	GGCC	5 cut(s)	46, 222, 266, 776, 931
HapII	CCGG	5 cut(s)	43, 50, 68, 252, 780
HgaI	GACGC	3 cut(s)	214, 989, 1910
HhaI	GCGC	4 cut(s)	172, 189, 215, 1731
Hin1I	GRCGYC	1 cut(s)	213
Hin6I	GCGC	4 cut(s)	170, 187, 213, 1729
HinP1I	GCGC	4 cut(s)	170, 187, 213, 1729
HincII	GTYRAC	2 cut(s)	82, 1074
HindII	GTYRAC	2 cut(s)	82, 1074
HindIII	AAGCTT	2 cut(s)	344, 608
HinfI	GANTC	8 cut(s)	62, 114, 241, 355, 1019, 1085, 1351, 1475
HpaII	CCGG	5 cut(s)	43, 50, 68, 252, 780
HphI	GGTGA	6 cut(s)	82, 1238, 1310, 1590, 1641, 1773
Hpy166II	GTNNAC	7 cut(s)	82, 229, 292, 1074, 1101, 1157, 1234
Hpy188III	TCNNGA	9 cut(s)	111, 701, 769, 1136, 1348, 1355, 1395, 1511, 1892
Hpy8I	GTNNAC	7 cut(s)	82, 229, 292, 1074, 1101, 1157, 1234
Hpy99I	CGWCG	3 cut(s)	62, 937, 1262
HpyAV	CCTTC	5 cut(s)	110, 226, 670, 1014, 1041
HpyCH4III	ACNGT	5 cut(s)	394, 763, 994, 1178, 1705
HpyCH4IV	ACGT	1 cut(s)	1657
HpyF10VI	GCNNNNNNNGC	3 cut(s)	219, 916, 1981
HpyF3I	CTNAG	8 cut(s)	309, 483, 666, 864, 942, 1023, 1821, 1857
HpySE526I	ACGT	1 cut(s)	1657
Hsp92I	GRCGYC	1 cut(s)	213
HspAI	GCGC	4 cut(s)	170, 187, 213, 1729
KasI	GGCGCC	1 cut(s)	212
Ksp22I	TGATCA	1 cut(s)	1888
LguI	GCTCTTC	1 cut(s)	1875
LmnI	GCTCC	8 cut(s)	254, 325, 572, 643, 703, 795, 916, 1894
Lsp1109I	GCAGC	3 cut(s)	194, 805, 1848
LweI	GCATC	8 cut(s)	590, 635, 947, 964, 1681, 1807, 1908, 2006
MaeI	CTAG	3 cut(s)	77, 1362, 1898
MaeII	ACGT	1 cut(s)	1657
MaeIII	GTNAC	2 cut(s)	70, 964
MbiI	CCGCTC	1 cut(s)	1984
MfeI	CAATTG	2 cut(s)	1401, 1665
MflI	RGATCY	3 cut(s)	443, 473, 1026
MhlI	GDGCHC	3 cut(s)	870, 1293, 1966
MlsI	TGGCCA	1 cut(s)	776
MluNI	TGGCCA	1 cut(s)	776
Mly113I	GGCGCC	1 cut(s)	213
MlyI	GAGTC	2 cut(s)	56, 123
MmeI	TCCRAC	3 cut(s)	405, 733, 1128
Mox20I	TGGCCA	1 cut(s)	776
Mph1103I	ATGCAT	1 cut(s)	605
MroXI	GAANNNNTTC	1 cut(s)	708
MscI	TGGCCA	1 cut(s)	776
MseI	TTAA	7 cut(s)	270, 567, 606, 899, 1266, 1275, 1766
MslI	CAYNNNNRTG	2 cut(s)	236, 543
Msp20I	TGGCCA	1 cut(s)	776
MspCI	CTTAAG	1 cut(s)	1265
MspI	CCGG	5 cut(s)	43, 50, 68, 252, 780
MspR9I	CCNGG	5 cut(s)	68, 438, 1713, 1833, 2004
MunI	CAATTG	2 cut(s)	1401, 1665
MvaI	CCWGG	4 cut(s)	438, 1713, 1833, 2004
MvnI	CGCG	3 cut(s)	170, 225, 1731
MwoI	GCNNNNNNNGC	3 cut(s)	219, 916, 1981
NarI	GGCGCC	1 cut(s)	213
NciI	CCSGG	1 cut(s)	68
NcoI	CCATGG	1 cut(s)	978
NlaIV	GGNNCC	5 cut(s)	214, 250, 699, 918, 1310
NmeAIII	GCCGAG	2 cut(s)	225, 1106
NmuCI	GTSAC	1 cut(s)	964
NsiI	ATGCAT	1 cut(s)	605
NspI	RCATGY	3 cut(s)	1080, 1192, 1777
NspV	TTCGAA	1 cut(s)	1616
PaqCI	CACCTGC	1 cut(s)	1919
PasI	CCCWGGG	1 cut(s)	1712
PciI	ACATGT	2 cut(s)	1188, 1773
PciSI	GCTCTTC	1 cut(s)	1875
PcsI	WCGNNNNNNNCGW	2 cut(s)	109, 252
PdmI	GAANNNNTTC	1 cut(s)	708
PfeI	GAWTC	6 cut(s)	241, 355, 1019, 1085, 1351, 1475
PkrI	GCNGC	7 cut(s)	138, 141, 209, 212, 224, 820, 1838
PleI	GAGTC	2 cut(s)	56, 122
PluTI	GGCGCC	1 cut(s)	216
PpsI	GAGTC	2 cut(s)	56, 122
Ppu21I	YACGTR	1 cut(s)	1658
PscI	ACATGT	2 cut(s)	1188, 1773
PshAI	GACNNNNGTC	1 cut(s)	1191
Psp124BI	GAGCTC	1 cut(s)	1966
Psp6I	CCWGG	4 cut(s)	436, 1711, 1831, 2002
PspEI	GGTNACC	1 cut(s)	70
PspGI	CCWGG	4 cut(s)	436, 1711, 1831, 2002
PspN4I	GGNNCC	5 cut(s)	214, 250, 699, 918, 1310
PstI	CTGCAG	1 cut(s)	1684
PstNI	CAGNNNCTG	1 cut(s)	1688
PsuI	RGATCY	3 cut(s)	443, 473, 1026
RsaI	GTAC	8 cut(s)	391, 682, 760, 806, 1102, 1156, 1622, 1702
RsaNI	GTAC	8 cut(s)	390, 681, 759, 805, 1101, 1155, 1621, 1701
RseI	CAYNNNNRTG	2 cut(s)	236, 543
SacI	GAGCTC	1 cut(s)	1966
SalI	GTCGAC	2 cut(s)	80, 1072
SapI	GCTCTTC	1 cut(s)	1875
SaqAI	TTAA	7 cut(s)	270, 567, 606, 899, 1266, 1275, 1766
SatI	GCNGC	7 cut(s)	137, 140, 208, 211, 223, 819, 1837
ScaI	AGTACT	1 cut(s)	1622
SchI	GAGTC	2 cut(s)	56, 123
ScrFI	CCNGG	5 cut(s)	68, 438, 1713, 1833, 2004
SduI	GDGCHC	3 cut(s)	870, 1293, 1966
SfaNI	GCATC	8 cut(s)	590, 635, 947, 964, 1681, 1807, 1908, 2006
SfcI	CTRYAG	2 cut(s)	1055, 1680
SfoI	GGCGCC	1 cut(s)	214
SfuI	TTCGAA	1 cut(s)	1616
SmiMI	CAYNNNNRTG	2 cut(s)	236, 543
SmlI	CTYRAG	2 cut(s)	329, 1265
SmoI	CTYRAG	2 cut(s)	329, 1265
SnaBI	TACGTA	1 cut(s)	1658
SspDI	GGCGCC	1 cut(s)	212
SspI	AATATT	2 cut(s)	533, 1741
SspMI	CTAG	3 cut(s)	77, 1362, 1898
SstI	GAGCTC	1 cut(s)	1966
StyD4I	CCNGG	5 cut(s)	66, 436, 1711, 1831, 2002
StyI	CCWWGG	2 cut(s)	791, 978
TaaI	ACNGT	5 cut(s)	394, 763, 994, 1178, 1705
TaiI	ACGT	1 cut(s)	1660
TaqI	TCGA	7 cut(s)	81, 768, 1073, 1441, 1478, 1616, 1960
TatI	WGTACW	4 cut(s)	758, 1100, 1154, 1620
TauI	GCSGC	4 cut(s)	139, 142, 213, 225
TfiI	GAWTC	6 cut(s)	241, 355, 1019, 1085, 1351, 1475
Tru1I	TTAA	7 cut(s)	270, 567, 606, 899, 1266, 1275, 1766
Tru9I	TTAA	7 cut(s)	270, 567, 606, 899, 1266, 1275, 1766
TscAI	CASTG	6 cut(s)	294, 399, 1124, 1183, 1300, 1798
TseFI	GTSAC	1 cut(s)	964
TseI	GCWGC	3 cut(s)	207, 818, 1836
Tsp45I	GTSAC	1 cut(s)	964
TspDTI	ATGAA	9 cut(s)	254, 689, 977, 1077, 1416, 1428, 1515, 1577, 1620
TspGWI	ACGGA	1 cut(s)	142
TspRI	CASTG	6 cut(s)	294, 399, 1124, 1183, 1300, 1798
Vha464I	CTTAAG	1 cut(s)	1265
XapI	RAATTY	3 cut(s)	467, 922, 983
XceI	RCATGY	3 cut(s)	1080, 1192, 1777
XcmI	CCANNNNNNNNNTGG	1 cut(s)	637
XmiI	GTMKAC	3 cut(s)	81, 228, 1073
XmnI	GAANNNNTTC	1 cut(s)	708
XspI	CTAG	3 cut(s)	77, 1362, 1898
ZrmI	AGTACT	1 cut(s)	1622
Zsp2I	ATGCAT	1 cut(s)	605

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.