Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001522

Physical Location & Seq

Genomic Coordinates Reverse (-)

26917786 .. 26920099

Gene Structure 2314 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G71420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGATTACAAGCTTATCTCAAATCTCTTTTGGGACATTGAGGCGCTTTGGCTCTTCTGTTTTACCTTCTGCACTGAAACGCGAATTTGTTGAAGGATTGCGTACGTTAGTAAGGTCTGGTGATATCCGTCGAGCTGTTTCCTTATTCTATTCTGCGCCGGTCGAGCTTCAGTCTCAACAGGCTTACGCAGCTCTGTTCCAAGCATGTGCAGAGCAACGCAATCTCCTCGATGGAATCAACTTGCACCACCACATGCTCTCACATCCCTATTGTTATTCACAGAACGTTATACTTGCTAATTTCCTCATTAATATGTATGCCAAATGTGGGAATATCTTATACGCACGACAGGTGTTTGATACAATGCCTGAGAGGAATGTTGTTTCATGGACTGCATTGATCACAGGCTATGTACAGGCTGGGAATGAGCAAGAGGGATTCTGTCTTTTCTCGTCTATGTTATCCCATTGTTTCCCTAACGAGTTTACGCTGTCAAGCGTGTTAACTTCATGTCGATATGAGCCTGGAAAGCAGGTACATGGACTTGCTCTGAAACTTGGTTTACATTGTTCGATCTATGTGGCGAATGCAGTTATCTCTATGTACGGTAGGTGTCATGATGGTGCCGCAGCATATGAAGCTTGGACTGTGTTTGAAGCCATAAAGTTTAAGAATTTGGTTACTTGGAACTCAATGATTGCTGCTTTTCAGTGCTGCAATCTTGGGAAAAAGGCCATTGGCGTTTTTATGCGGATGCATAGTGATGGAGTGGGATTTGATCGTGCCACGTTGCTTAATATATGTTCTTCCTTGTACAAAAGCTCTGACTTAGTTCCTAATGAGGTTTCAAAGTGTTGTCTTCAACTGCATTCTCTGACTGTAAAATCCGGGTTGGTGACTCAGACTGAAGTGGCTACTGCATTGATTAAAGTTTATTCAGAAATGTTAGAAGACTATACTGACTGCTACAAGCTTTTTATGGAAATGAGTCACTGCAGGGACATTGTTGCTTGGAATGGGATTATAACAGCGTTTGCAGTGTATGATCCGGAGAGAGCTATTCATCTCTTTGGTCAGTTACGTCAGGAGAAGCTAAGCCCTGACTGGTATACTTTCTCAAGTGTACTAAAAGCTTGTGCAGGACTTGTCACTGCTCGCCATGCTTTGTCTATACACGCTCAAGTGATCAAGGGTGGTTTTTTGGCTGACACGGTGCTGAACAACTCATTAATCCATGCGTATGCCAAGTGTGGCTCTCTTGACTTGTGTATGCGTGTATTTGACGATATGGATTCGCGGGATGTTGTTTCCTGGAACTCAATGCTCAAGGCTTACTCATTACATGGCCAAGTAGACTCAATTCTACCAGTCTTTCAGAAAATGGACATCAACCCCGATTCAGCGACTTTCATAGCCCTTCTCTCGGCTTGCAGCCACGCAGGACGAGTAGAAGAAGGATTGAGAATATTCAGATCCATGTTTGAGAAACCTGAAACTCTTCCTCAGCTAAATCACTACGCTTGTGTGATCGATATGCTAAGCCGAGCTGAGCGTTTTGCTGAGGCAGAAGAGGTTATCAAGCAGATGCCAATGGACCCAGATGCTGTAGTTTGGATTGCATTATTGGGATCATGTAGAAAGCACGGTAACACCCGGTTGGGTAAGTTAGCGGCAGATAAACTTAAAGAGCTAGTCGAACCCACAAACTCAATGAGTTACATCCAGATGTCAAACATATACAACGCAGAAGGTAGCTTTAACGAAGCCAATCTTAGCATAAAGGAGATGGAAACATGGAGAGTACGGAAAGAACCAGACTTAAGCTGGACAGAGATAGGAAACAAGGTTCACGAATTCGCATCGGGAGGAAGACACCGTCCGGACAAGGAAGCCGTATACAGAGAATTGAAGAGACTGATTAGTTGGTTAAAGGAGATGGGTTACGTTCCAGAAATGAGGTCAGCTTCACAAGATATAGAAGACGAAGAACAGGAGGAAGATAATTTATTACATCACAGCGAGAAACTTGCGTTAGCGTTTGCGGTTATGGAGGGAAGAAAATCGAGTGATTGTGGTGTGAATTTGATACAGATTATGAAGAACACAAGGATCTGTATTGATTGCCATAACTTCATGAAATTAGCTTCTAAGCTTTTGGGAAAAGAGATTCTTATGAGAGACTCGAATCGGTTTCACCATTTCAAAGATTCTTCTTGCTCCTGTAATGACTACTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

745

Amino Acids

84.02

Weight (kDa)

6.52

Isoelectric Point (pI)

42.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	125 - 171	2.2e-07	PPR repeat family
PPR_2	PF13041	333 - 380	2.2e-06	PPR repeat family
PPR_2	PF13041	433 - 478	7.6e-07	PPR repeat family
E_motif	PF20431	548 - 611	1.7e-08	E motif
DYW_deaminase	PF14432	647 - 745	2.2e-32	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71420
fragaria_vesca	FvH4_2g00530 FvH4_2g00530 FvH4_2g00560 FvH4_2g00560 FvH4_2g00560 FvH4_2g00560
malus_domestica	MD05G1002500.v1.1
prunus_persica	Prupe.8G005700_v2.0.a1
pyrus_communis	pycom05g00240
rosa_chinensis	RchiOBHm_Chr6g0250571 RchiOBHm_Chr6g0250641 RchiOBHm_Chr6g0250661 RchiOBHm_Chr6g0250741 RchiOBHm_Chr6g0250751 RchiOBHm_Chr6g0250881 RchiOBHm_Chr6g0250901 RchiOBHm_Chr6g0250941 RchiOBHm_Chr6g0251021
rosa_laevigata	RLG00000001886 RLG00000015490 RLG00000015491 RLG00000015495 RLG00000015496 RLG00000015497 RLG00000015516 RLG00000015517 RLG00000015521 RLG00000015534
rosa_multiflora	Rmu_co8213794.1_g000001 Rmu_co8225142.1_g000001 Rmu_co8465043.1_g000001 Rmu_sc0001209.1_g000010 Rmu_sc0001209.1_g000028 Rmu_sc0001209.1_g000030 Rmu_sc0003527.1_g000008 Rmu_sc0026821.1_g000002 Rmu_sc0031313.1_g000001 Rmu_sc0037610.1_g000001
rosa_roxburghii	Rroxscaffold_7G00217150
rosa_rugosa	Rorug05G0498000 Rorug05G0499000 Rorug05G0499100 Rorug05G0499400
rosa_samantha	Rh6AG006800 Rh6AG007100 Rh6BG003500 Rh6BG003800 Rh6DG005100
rosa_wichuraiana	Rw6G000790 Rw6G000840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1025
Acc36I	ACCTGC	1 cut(s)	523
AccB1I	GGYRCC	1 cut(s)	623
AccI	GTMKAC	3 cut(s)	1109, 1353, 1896
AccII	CGCG	2 cut(s)	81, 1297
AccIII	TCCGGA	2 cut(s)	1048, 1879
AciI	CCGC	5 cut(s)	627, 751, 1297, 1670, 2042
AclI	AACGTT	1 cut(s)	285
AclWI	GGATC	4 cut(s)	1040, 1467, 1636, 2117
AcoI	YGGCCR	1 cut(s)	1345
AcsI	RAATTY	4 cut(s)	83, 673, 1853, 2080
AcuI	CTGAAG	2 cut(s)	152, 927
AfaI	GTAC	7 cut(s)	103, 414, 537, 605, 815, 1125, 1803
AfiI	CCNNNNNNNGG	2 cut(s)	327, 1423
AflII	CTTAAG	1 cut(s)	1819
AgsI	TTSAA	6 cut(s)	92, 656, 849, 863, 1909, 2203
AjnI	CCWGG	2 cut(s)	523, 1310
AloI	GAACNNNNNNTCC	2 cut(s)	1830, 1862
Alw26I	GTCTC	3 cut(s)	177, 1906, 2172
AlwI	GGATC	4 cut(s)	1040, 1467, 1636, 2117
AlwNI	CAGNNNCTG	1 cut(s)	1604
Aor13HI	TCCGGA	2 cut(s)	1048, 1879
AoxI	GGCC	2 cut(s)	732, 1345
ApeKI	GCWGC	5 cut(s)	188, 629, 701, 714, 1431
ApoI	RAATTY	4 cut(s)	83, 673, 1853, 2080
AseI	ATTAAT	2 cut(s)	309, 1229
Asp700I	GAANNNNTTC	1 cut(s)	1497
AspLEI	GCGC	2 cut(s)	45, 157
AspS9I	GGNCC	1 cut(s)	1594
AsuC2I	CCSGG	2 cut(s)	889, 1654
AsuHPI	GGTGA	3 cut(s)	131, 907, 2186
AvaII	GGWCC	1 cut(s)	1594
BalI	TGGCCA	1 cut(s)	1347
BanI	GGYRCC	1 cut(s)	623
BbsI	GAAGAC	4 cut(s)	851, 957, 1876, 1986
BbvCI	CCTCAGC	2 cut(s)	1503, 1560
BbvI	GCAGC	5 cut(s)	200, 641, 688, 701, 1443
BccI	CCATC	5 cut(s)	224, 614, 758, 1780, 1930
BceAI	ACGGC	1 cut(s)	1877
BcgI	CGANNNNNNTGC	4 cut(s)	208, 242, 2009, 2043
BciT130I	CCWGG	2 cut(s)	525, 1312
BclI	TGATCA	2 cut(s)	399, 1185
BcnI	CCSGG	2 cut(s)	889, 1654
BcoDI	GTCTC	3 cut(s)	177, 1906, 2172
BfaI	CTAG	1 cut(s)	1691
BfmI	CTRYAG	2 cut(s)	994, 1605
BfoI	RGCGCY	1 cut(s)	46
BfrI	CTTAAG	1 cut(s)	1819
BfuAI	ACCTGC	1 cut(s)	523
BisI	GCNGC	7 cut(s)	189, 627, 630, 702, 715, 1432, 1671
BlpI	GCTNAGC	3 cut(s)	1094, 1538, 1548
BlsI	GCNGC	7 cut(s)	190, 628, 631, 703, 716, 1433, 1672
Bme1390I	CCNGG	4 cut(s)	525, 889, 1312, 1654
Bme18I	GGWCC	1 cut(s)	1594
BmgT120I	GGNCC	1 cut(s)	1594
BmiI	GGNNCC	2 cut(s)	625, 1596
BmrFI	CCNGG	4 cut(s)	525, 889, 1312, 1654
BmsI	GCATC	4 cut(s)	744, 1575, 1591, 1868
BpiI	GAAGAC	4 cut(s)	851, 957, 1876, 1986
Bpu10I	CCTNAGC	2 cut(s)	1503, 1560
Bpu1102I	GCTNAGC	3 cut(s)	1094, 1538, 1548
BpuEI	CTTGAG	3 cut(s)	1102, 1164, 1310
BpuMI	CCSGG	2 cut(s)	889, 1654
Bsa29I	ATCGAT	1 cut(s)	1530
BsaWI	WCCGGW	2 cut(s)	1048, 1879
BsaXI	ACNNNNNCTCC	2 cut(s)	207, 237
Bsc4I	CCNNNNNNNGG	2 cut(s)	327, 1423
Bse118I	RCCGGY	1 cut(s)	157
Bse1I	ACTGG	3 cut(s)	1109, 1367, 2237
BseAI	TCCGGA	2 cut(s)	1048, 1879
BseBI	CCWGG	2 cut(s)	525, 1312
BseCI	ATCGAT	1 cut(s)	1530
BseGI	GGATG	4 cut(s)	262, 759, 1306, 1719
BseLI	CCNNNNNNNGG	2 cut(s)	327, 1423
BseMII	CTCAG	5 cut(s)	360, 914, 1517, 1539, 1551
BseNI	ACTGG	3 cut(s)	1109, 1367, 2237
BseRI	GAGGAG	1 cut(s)	215
BseXI	GCAGC	5 cut(s)	200, 641, 688, 701, 1443
BseYI	CCCAGC	1 cut(s)	419
BsgI	GTGCAG	3 cut(s)	54, 228, 1158
Bsh1236I	CGCG	2 cut(s)	81, 1297
Bsh1285I	CGRYCG	1 cut(s)	162
BshFI	GGCC	2 cut(s)	734, 1347
BshNI	GGYRCC	1 cut(s)	623
BshVI	ATCGAT	1 cut(s)	1530
BsiEI	CGRYCG	1 cut(s)	162
BsiSI	CCGG	5 cut(s)	158, 888, 1049, 1654, 1880
BsiWI	CGTACG	1 cut(s)	101
BslFI	GGGAC	2 cut(s)	46, 1013
BslI	CCNNNNNNNGG	2 cut(s)	327, 1423
BsmAI	GTCTC	3 cut(s)	177, 1906, 2172
BsmFI	GGGAC	2 cut(s)	46, 1013
BsmI	GAATGC	2 cut(s)	592, 868
BsnI	GGCC	2 cut(s)	734, 1347
Bsp13I	TCCGGA	2 cut(s)	1048, 1879
Bsp1407I	TGTACA	2 cut(s)	412, 813
Bsp143I	GATC	9 cut(s)	399, 573, 778, 1045, 1185, 1472, 1527, 1628, 2109
Bsp1720I	GCTNAGC	3 cut(s)	1094, 1538, 1548
BspACI	CCGC	5 cut(s)	627, 751, 1297, 1670, 2042
BspANI	GGCC	2 cut(s)	734, 1347
BspCNI	CTCAG	5 cut(s)	361, 913, 1516, 1540, 1552
BspDI	ATCGAT	1 cut(s)	1530
BspEI	TCCGGA	2 cut(s)	1048, 1879
BspFNI	CGCG	2 cut(s)	81, 1297
BspHI	TCATGA	2 cut(s)	616, 2133
BspLI	GGNNCC	2 cut(s)	625, 1596
BspMAI	CTGCAG	1 cut(s)	998
BspMI	ACCTGC	1 cut(s)	523
BspPI	GGATC	4 cut(s)	1040, 1467, 1636, 2117
BspQI	GCTCTTC	1 cut(s)	58
BspT107I	GGYRCC	1 cut(s)	623
BspTI	CTTAAG	1 cut(s)	1819
BsrFI	RCCGGY	1 cut(s)	157
BsrGI	TGTACA	2 cut(s)	412, 813
BsrI	ACTGG	3 cut(s)	1109, 1367, 2237
BssAI	RCCGGY	1 cut(s)	157
BssMI	GATC	9 cut(s)	399, 573, 778, 1045, 1185, 1472, 1527, 1628, 2109
BssNAI	GTATAC	2 cut(s)	1110, 1897
Bst1107I	GTATAC	2 cut(s)	1110, 1897
Bst2UI	CCWGG	2 cut(s)	525, 1312
Bst4CI	ACNGT	6 cut(s)	608, 649, 880, 1213, 1646, 1877
Bst6I	CTCTTC	4 cut(s)	58, 1503, 1563, 1904
BstAFI	CTTAAG	1 cut(s)	1819
BstAUI	TGTACA	2 cut(s)	412, 813
BstC8I	GCNNGC	2 cut(s)	1156, 1429
BstF5I	GGATG	4 cut(s)	262, 759, 1306, 1719
BstFNI	CGCG	2 cut(s)	81, 1297
BstH2I	RGCGCY	1 cut(s)	46
BstHHI	GCGC	2 cut(s)	45, 157
BstKTI	GATC	9 cut(s)	402, 576, 781, 1048, 1188, 1475, 1530, 1631, 2112
BstMAI	GTCTC	3 cut(s)	177, 1906, 2172
BstMBI	GATC	9 cut(s)	399, 573, 778, 1045, 1185, 1472, 1527, 1628, 2109
BstMCI	CGRYCG	1 cut(s)	162
BstMWI	GCNNNNNNNGC	5 cut(s)	163, 188, 529, 638, 1160
BstNI	CCWGG	2 cut(s)	525, 1312
BstNSI	RCATGY	2 cut(s)	207, 256
BstSCI	CCNGG	4 cut(s)	523, 887, 1310, 1652
BstSFI	CTRYAG	2 cut(s)	994, 1605
BstUI	CGCG	2 cut(s)	81, 1297
BstV1I	GCAGC	5 cut(s)	200, 641, 688, 701, 1443
BstV2I	GAAGAC	4 cut(s)	851, 957, 1876, 1986
BstX2I	RGATCY	2 cut(s)	1472, 2109
BstYI	RGATCY	2 cut(s)	1472, 2109
BstZ17I	GTATAC	2 cut(s)	1110, 1897
Bsu15I	ATCGAT	1 cut(s)	1530
BsuRI	GGCC	2 cut(s)	734, 1347
BsuTUI	ATCGAT	1 cut(s)	1530
BtsCI	GGATG	4 cut(s)	262, 759, 1306, 1719
BtsI	GCAGTG	3 cut(s)	991, 1044, 1149
BtsIMutI	CAGTG	5 cut(s)	71, 716, 991, 1044, 1149
BveI	ACCTGC	1 cut(s)	523
Cac8I	GCNNGC	2 cut(s)	1156, 1429
CaiI	CAGNNNCTG	1 cut(s)	1604
CciI	TCATGA	2 cut(s)	616, 2133
CfoI	GCGC	2 cut(s)	45, 157
Cfr10I	RCCGGY	1 cut(s)	157
Cfr13I	GGNCC	1 cut(s)	1594
ClaI	ATCGAT	1 cut(s)	1530
Csp6I	GTAC	7 cut(s)	102, 413, 536, 604, 814, 1124, 1802
CviQI	GTAC	7 cut(s)	102, 413, 536, 604, 814, 1124, 1802
DpnI	GATC	9 cut(s)	401, 575, 780, 1047, 1187, 1474, 1529, 1630, 2111
DpnII	GATC	9 cut(s)	399, 573, 778, 1045, 1185, 1472, 1527, 1628, 2109
EaeI	YGGCCR	1 cut(s)	1345
Eam1104I	CTCTTC	4 cut(s)	58, 1503, 1563, 1904
EarI	CTCTTC	4 cut(s)	58, 1503, 1563, 1904
Eco32I	GATATC	1 cut(s)	124
Eco47I	GGWCC	1 cut(s)	1594
Eco57I	CTGAAG	2 cut(s)	152, 927
EcoRI	GAATTC	1 cut(s)	1853
EcoRII	CCWGG	2 cut(s)	523, 1310
EcoRV	GATATC	1 cut(s)	124
EcoT22I	ATGCAT	1 cut(s)	759
FalI	AAGNNNNNCTT	4 cut(s)	1755, 1787, 2154, 2186
FaqI	GGGAC	2 cut(s)	46, 1013
FauI	CCCGC	1 cut(s)	1290
FauNDI	CATATG	1 cut(s)	634
FbaI	TGATCA	2 cut(s)	399, 1185
FblI	GTMKAC	3 cut(s)	1109, 1353, 1896
Fnu4HI	GCNGC	7 cut(s)	189, 627, 630, 702, 715, 1432, 1671
FokI	GGATG	4 cut(s)	249, 766, 1313, 1706
Fsp4HI	GCNGC	7 cut(s)	189, 627, 630, 702, 715, 1432, 1671
FspBI	CTAG	1 cut(s)	1691
GlaI	GCGC	2 cut(s)	44, 156
GluI	GCNGC	7 cut(s)	189, 627, 630, 702, 715, 1432, 1671
GsaI	CCCAGC	1 cut(s)	423
HaeII	RGCGCY	1 cut(s)	46
HaeIII	GGCC	2 cut(s)	734, 1347
HapII	CCGG	5 cut(s)	158, 888, 1049, 1654, 1880
HhaI	GCGC	2 cut(s)	45, 157
Hin6I	GCGC	2 cut(s)	43, 155
HinP1I	GCGC	2 cut(s)	43, 155
HincII	GTYRAC	1 cut(s)	504
HindII	GTYRAC	1 cut(s)	504
HindIII	AAGCTT	5 cut(s)	10, 639, 971, 1131, 2150
HpaI	GTTAAC	1 cut(s)	504
HpaII	CCGG	5 cut(s)	158, 888, 1049, 1654, 1880
HphI	GGTGA	3 cut(s)	131, 907, 2186
Hpy166II	GTNNAC	8 cut(s)	486, 504, 563, 1110, 1124, 1354, 1849, 1897
Hpy188I	TCNGA	7 cut(s)	552, 826, 876, 903, 940, 1377, 1472
Hpy8I	GTNNAC	8 cut(s)	486, 504, 563, 1110, 1124, 1354, 1849, 1897
Hpy99I	CGWCG	1 cut(s)	132
HpyAV	CCTTC	5 cut(s)	75, 86, 1427, 1448, 1742
HpyCH4III	ACNGT	6 cut(s)	608, 649, 880, 1213, 1646, 1877
HpyCH4IV	ACGT	5 cut(s)	104, 285, 788, 1081, 1944
HpyF10VI	GCNNNNNNNGC	5 cut(s)	163, 188, 529, 638, 1160
HpySE526I	ACGT	5 cut(s)	104, 285, 788, 1081, 1944
HspAI	GCGC	2 cut(s)	43, 155
Kpn2I	TCCGGA	2 cut(s)	1048, 1879
Ksp22I	TGATCA	2 cut(s)	399, 1185
KspAI	GTTAAC	1 cut(s)	504
Kzo9I	GATC	9 cut(s)	399, 573, 778, 1045, 1185, 1472, 1527, 1628, 2109
LguI	GCTCTTC	1 cut(s)	58
LmnI	GCTCC	1 cut(s)	2222
Lsp1109I	GCAGC	5 cut(s)	200, 641, 688, 701, 1443
LweI	GCATC	4 cut(s)	744, 1575, 1591, 1868
MaeI	CTAG	1 cut(s)	1691
MaeII	ACGT	5 cut(s)	104, 285, 788, 1081, 1944
MaeIII	GTNAC	8 cut(s)	679, 895, 989, 1077, 1147, 1646, 1715, 1940
MalI	GATC	9 cut(s)	401, 575, 780, 1047, 1187, 1474, 1529, 1630, 2111
MboI	GATC	9 cut(s)	399, 573, 778, 1045, 1185, 1472, 1527, 1628, 2109
MflI	RGATCY	2 cut(s)	1472, 2109
MlsI	TGGCCA	1 cut(s)	1347
MluCI	AATT	9 cut(s)	83, 298, 673, 1359, 1853, 1904, 2002, 2080, 2138
MluNI	TGGCCA	1 cut(s)	1347
MlyI	GAGTC	4 cut(s)	892, 997, 1349, 2174
Mox20I	TGGCCA	1 cut(s)	1347
Mph1103I	ATGCAT	1 cut(s)	759
MroI	TCCGGA	2 cut(s)	1048, 1879
MroXI	GAANNNNTTC	1 cut(s)	1497
MscI	TGGCCA	1 cut(s)	1347
MslI	CAYNNNNRTG	5 cut(s)	311, 621, 762, 1239, 1724
Msp20I	TGGCCA	1 cut(s)	1347
MspCI	CTTAAG	1 cut(s)	1819
MspI	CCGG	5 cut(s)	158, 888, 1049, 1654, 1880
MspR9I	CCNGG	4 cut(s)	525, 889, 1312, 1654
Mva1269I	GAATGC	2 cut(s)	592, 868
MvaI	CCWGG	2 cut(s)	525, 1312
MvnI	CGCG	2 cut(s)	81, 1297
MwoI	GCNNNNNNNGC	5 cut(s)	163, 188, 529, 638, 1160
NciI	CCSGG	2 cut(s)	889, 1654
NdeI	CATATG	1 cut(s)	634
NdeII	GATC	9 cut(s)	399, 573, 778, 1045, 1185, 1472, 1527, 1628, 2109
NlaIV	GGNNCC	2 cut(s)	625, 1596
NmeAIII	GCCGAG	2 cut(s)	1403, 1568
NmuCI	GTSAC	3 cut(s)	895, 989, 1147
NsiI	ATGCAT	1 cut(s)	759
NspI	RCATGY	2 cut(s)	207, 256
PagI	TCATGA	2 cut(s)	616, 2133
PciSI	GCTCTTC	1 cut(s)	58
PctI	GAATGC	2 cut(s)	592, 868
PdmI	GAANNNNTTC	1 cut(s)	1497
PfeI	GAWTC	7 cut(s)	234, 438, 1292, 1397, 2167, 2185, 2207
Pfl23II	CGTACG	1 cut(s)	101
PflFI	GACNNNGTC	1 cut(s)	1875
PfoI	TCCNGGA	1 cut(s)	1310
PkrI	GCNGC	7 cut(s)	190, 628, 631, 703, 716, 1433, 1672
PleI	GAGTC	4 cut(s)	892, 996, 1349, 2174
PpsI	GAGTC	4 cut(s)	892, 996, 1349, 2174
PshBI	ATTAAT	2 cut(s)	309, 1229
PsiI	TTATAA	1 cut(s)	1025
Psp1406I	AACGTT	1 cut(s)	285
Psp6I	CCWGG	2 cut(s)	523, 1310
PspFI	CCCAGC	1 cut(s)	419
PspGI	CCWGG	2 cut(s)	523, 1310
PspLI	CGTACG	1 cut(s)	101
PspN4I	GGNNCC	2 cut(s)	625, 1596
PspPI	GGNCC	1 cut(s)	1594
PstI	CTGCAG	1 cut(s)	998
PstNI	CAGNNNCTG	1 cut(s)	1604
PsuI	RGATCY	2 cut(s)	1472, 2109
PsyI	GACNNNGTC	1 cut(s)	1875
RsaI	GTAC	7 cut(s)	103, 414, 537, 605, 815, 1125, 1803
RsaNI	GTAC	7 cut(s)	102, 413, 536, 604, 814, 1124, 1802
RseI	CAYNNNNRTG	5 cut(s)	311, 621, 762, 1239, 1724
SapI	GCTCTTC	1 cut(s)	58
SatI	GCNGC	7 cut(s)	189, 627, 630, 702, 715, 1432, 1671
Sau3AI	GATC	9 cut(s)	399, 573, 778, 1045, 1185, 1472, 1527, 1628, 2109
Sau96I	GGNCC	1 cut(s)	1594
SchI	GAGTC	4 cut(s)	892, 997, 1349, 2174
ScrFI	CCNGG	4 cut(s)	525, 889, 1312, 1654
SfaNI	GCATC	4 cut(s)	744, 1575, 1591, 1868
SfcI	CTRYAG	2 cut(s)	994, 1605
SinI	GGWCC	1 cut(s)	1594
SmiMI	CAYNNNNRTG	5 cut(s)	311, 621, 762, 1239, 1724
SmlI	CTYRAG	4 cut(s)	1117, 1179, 1325, 1819
SmoI	CTYRAG	4 cut(s)	1117, 1179, 1325, 1819
Sse9I	AATT	9 cut(s)	83, 298, 673, 1359, 1853, 1904, 2002, 2080, 2138
SsiI	CCGC	5 cut(s)	627, 751, 1297, 1670, 2042
SspI	AATATT	1 cut(s)	1467
SspMI	CTAG	1 cut(s)	1691
StyD4I	CCNGG	4 cut(s)	523, 887, 1310, 1652
TaaI	ACNGT	6 cut(s)	608, 649, 880, 1213, 1646, 1877
TaiI	ACGT	5 cut(s)	107, 288, 791, 1084, 1947
TaqI	TCGA	9 cut(s)	130, 162, 228, 514, 572, 1530, 1695, 2063, 2183
TasI	AATT	9 cut(s)	83, 298, 673, 1359, 1853, 1904, 2002, 2080, 2138
TatI	WGTACW	3 cut(s)	412, 813, 1123
TauI	GCSGC	2 cut(s)	629, 1673
TfiI	GAWTC	7 cut(s)	234, 438, 1292, 1397, 2167, 2185, 2207
TscAI	CASTG	5 cut(s)	78, 716, 998, 1044, 1156
TseFI	GTSAC	3 cut(s)	895, 989, 1147
TseI	GCWGC	5 cut(s)	188, 629, 701, 714, 1431
Tsp45I	GTSAC	3 cut(s)	895, 989, 1147
TspDTI	ATGAA	8 cut(s)	375, 498, 651, 1052, 1399, 2111, 2122, 2150
TspGWI	ACGGA	2 cut(s)	116, 1819
TspRI	CASTG	5 cut(s)	78, 716, 998, 1044, 1156
Tth111I	GACNNNGTC	1 cut(s)	1875
Vha464I	CTTAAG	1 cut(s)	1819
VpaK11BI	GGWCC	1 cut(s)	1594
VspI	ATTAAT	2 cut(s)	309, 1229
XapI	RAATTY	4 cut(s)	83, 673, 1853, 2080
XceI	RCATGY	2 cut(s)	207, 256
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1821
XmiI	GTMKAC	3 cut(s)	1109, 1353, 1896
XmnI	GAANNNNTTC	1 cut(s)	1497
XspI	CTAG	1 cut(s)	1691
Zsp2I	ATGCAT	1 cut(s)	759

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.