Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8465043.1

Orthogroup ID

OG0001522

Physical Location & Seq

Genomic Coordinates Forward (+)

471 .. 1908

Gene Structure 1438 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8465043.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1438 bp

atgctacggcgatgtgctcgctcgtgtctcatatctcggagaacctttagctcaatcaaccttcgtgtccttcccgcacctcccagcctcaacctacaaacaaataaccttctcggcgaagtgcgagccctggccacacgcggccaactaaacgaagcgctctcactcttctacactcttcaaccgccaccagctcaaactcactgcaaccaaacctacgccactctcttccacgcatgcgctcgccactactccctccaacaaggcctctctctgcaccattacatgcttgcccacaaccccatcactcctcatcccgacctctttgtctccaaccaccttatcaacatgtacgccaagtttggctacttagacgacgcccaccagctgttcgatgaaatgcccagaagaaacctcgtcacctggaccgctctcatttccgggtacgcacagcggagtcgagctcacaattgtttccgtttatttgcttccatgttggcgcattacctcccaaatgagtttgcatttgccagcgtgctaagtgcgtgtgctgatcgcgatggtggatatggccggcaagtacacgccctcgctttgaaaatgtctttggatgcttgcgtttacgttgcgaacgctctcattaccatgtacagcaaggtgtgtgatcatggaggggtctttgatgttagtagagacgaggcatggaaggtgtttagaagcatggaatcccggaatcttatatcctggaattccatgattgcagggtttcagtgtagtcgacttggagctcaagctattgatctttttgtccaaatgcaccttgatgggctcgagtttgaccgtgccacacttctcagcgttttttcttccttgaatggagtaaatggcattgatgatatagtggtcactaagttttgttatcaactgcattgtctggttatcaaaaccgggtttatagtaggaattgaagtggtcactgcactggttaaagcttattcagatcttggaggggatgttgctgactgttacaggctcttctctgaggcaagctgtcatcgagatattgttgcgtggacgggcattatgacaatattttcccagcgggaccctgaagaagcactctccctttttcgtcaattacgccgggagaatttagctccagacaggtataccttctccattgttttaaaaacctacgcaagccttgcaaccgagcaccatacctcggcagttcattctcaagttatcagaggcgggtttgggggtgacacagtccttgcaaacgccttgatccatgcatatgctcggtgcggctccatttccttgtctaagcaagtttttgatggaattgagtttcgtgatgttgtttcttggaacacaatgctcaaggcttatgccttgtatggacaagctgcagaggcactgcagcttttttcac

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

479

Amino Acids

53.51

Weight (kDa)

7.93

Isoelectric Point (pI)

46.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71420
fragaria_vesca	FvH4_2g00530 FvH4_2g00530 FvH4_2g00560 FvH4_2g00560 FvH4_2g00560 FvH4_2g00560
malus_domestica	MD05G1002500.v1.1
prunus_persica	Prupe.8G005700_v2.0.a1
pyrus_communis	pycom05g00240
rosa_chinensis	RchiOBHm_Chr6g0250571 RchiOBHm_Chr6g0250641 RchiOBHm_Chr6g0250661 RchiOBHm_Chr6g0250741 RchiOBHm_Chr6g0250751 RchiOBHm_Chr6g0250881 RchiOBHm_Chr6g0250901 RchiOBHm_Chr6g0250941 RchiOBHm_Chr6g0251021
rosa_laevigata	RLG00000001886 RLG00000015490 RLG00000015491 RLG00000015495 RLG00000015496 RLG00000015497 RLG00000015516 RLG00000015517 RLG00000015521 RLG00000015534
rosa_multiflora	Rmu_co8213794.1_g000001 Rmu_co8225142.1_g000001 Rmu_co8465043.1_g000001 Rmu_sc0001209.1_g000010 Rmu_sc0001209.1_g000028 Rmu_sc0001209.1_g000030 Rmu_sc0003527.1_g000008 Rmu_sc0026821.1_g000002 Rmu_sc0031313.1_g000001 Rmu_sc0037610.1_g000001
rosa_roxburghii	Rroxscaffold_7G00217150
rosa_rugosa	Rorug05G0498000 Rorug05G0499000 Rorug05G0499100 Rorug05G0499400
rosa_samantha	Rh6AG006800 Rh6AG007100 Rh6BG003500 Rh6BG003800 Rh6DG005100
rosa_wichuraiana	Rw6G000790 Rw6G000840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	326
AccBSI	CCGCTC	1 cut(s)	431
AccI	GTMKAC	2 cut(s)	778, 1169
AccII	CGCG	2 cut(s)	141, 558
AciI	CCGC	8 cut(s)	75, 141, 185, 429, 454, 1102, 1254, 1311
AclWI	GGATC	1 cut(s)	1285
AcoI	YGGCCR	3 cut(s)	132, 142, 571
AcsI	RAATTY	2 cut(s)	748, 1150
AcuI	CTGAAG	1 cut(s)	1131
AcyI	GRCGYC	1 cut(s)	378
AfaI	GTAC	4 cut(s)	353, 446, 582, 650
AfeI	AGCGCT	1 cut(s)	159
AfiI	CCNNNNNNNGG	1 cut(s)	1225
AflIII	ACRYGT	1 cut(s)	348
AgsI	TTSAA	4 cut(s)	182, 598, 874, 968
AjnI	CCWGG	3 cut(s)	129, 422, 743
AjuI	GAANNNNNNNTTGG	2 cut(s)	590, 622
Alw21I	GWGCWC	4 cut(s)	19, 466, 790, 1218
Alw26I	GTCTC	3 cut(s)	32, 334, 687
AlwI	GGATC	1 cut(s)	1285
Ama87I	CYCGRG	1 cut(s)	830
Aor51HI	AGCGCT	1 cut(s)	159
AoxI	GGCC	4 cut(s)	132, 142, 265, 571
ApeKI	GCWGC	2 cut(s)	1412, 1426
ApoI	RAATTY	2 cut(s)	748, 1150
AspLEI	GCGC	3 cut(s)	160, 242, 502
AspS9I	GGNCC	2 cut(s)	426, 1105
AsuC2I	CCSGG	4 cut(s)	442, 730, 949, 1145
AsuHPI	GGTGA	2 cut(s)	412, 1277
AvaI	CYCGRG	1 cut(s)	830
AvaII	GGWCC	2 cut(s)	426, 1105
BalI	TGGCCA	1 cut(s)	134
BanII	GRGCYC	4 cut(s)	130, 466, 790, 831
BauI	CACGAG	1 cut(s)	22
Bbv12I	GWGCWC	4 cut(s)	19, 466, 790, 1218
BbvI	GCAGC	1 cut(s)	1399
BccI	CCATC	4 cut(s)	311, 554, 818, 1337
BceAI	ACGGC	1 cut(s)	23
BciT130I	CCWGG	3 cut(s)	131, 424, 745
BclI	TGATCA	1 cut(s)	664
BcnI	CCSGG	4 cut(s)	442, 730, 949, 1145
BcoDI	GTCTC	3 cut(s)	32, 334, 687
BfmI	CTRYAG	2 cut(s)	1413, 1424
BfoI	RGCGCY	1 cut(s)	161
BglII	AGATCT	1 cut(s)	1000
BisI	GCNGC	4 cut(s)	142, 1312, 1413, 1427
BlsI	GCNGC	4 cut(s)	143, 1313, 1414, 1428
Bme1390I	CCNGG	7 cut(s)	131, 424, 442, 730, 745, 949, 1145
Bme18I	GGWCC	2 cut(s)	426, 1105
BmeT110I	CYCGRG	1 cut(s)	830
BmgT120I	GGNCC	2 cut(s)	426, 1105
BmiI	GGNNCC	3 cut(s)	1106, 1107, 1315
BmrFI	CCNGG	7 cut(s)	131, 424, 442, 730, 745, 949, 1145
BmsI	GCATC	1 cut(s)	601
BplI	GAGNNNNNCTC	2 cut(s)	448, 480
BpmI	CTGGAG	1 cut(s)	1143
BpuEI	CTTGAG	3 cut(s)	774, 1224, 1370
BpuMI	CCSGG	4 cut(s)	442, 730, 949, 1145
BsaHI	GRCGYC	1 cut(s)	378
BsaJI	CCNNGG	2 cut(s)	129, 1224
BsaXI	ACNNNNNCTCC	2 cut(s)	999, 1029
Bsc4I	CCNNNNNNNGG	1 cut(s)	1225
Bse118I	RCCGGY	1 cut(s)	573
Bse1I	ACTGG	1 cut(s)	987
BseBI	CCWGG	3 cut(s)	131, 424, 745
BseDI	CCNNGG	2 cut(s)	129, 1224
BseGI	GGATG	3 cut(s)	313, 616, 1018
BseLI	CCNNNNNNNGG	1 cut(s)	1225
BseMII	CTCAG	2 cut(s)	868, 1032
BseNI	ACTGG	1 cut(s)	987
BseRI	GAGGAG	1 cut(s)	300
BseXI	GCAGC	1 cut(s)	1399
BseYI	CCCAGC	2 cut(s)	83, 1098
BsgI	GTGCAG	2 cut(s)	260, 963
Bsh1236I	CGCG	2 cut(s)	141, 558
BshFI	GGCC	4 cut(s)	134, 144, 267, 573
BsiHKAI	GWGCWC	4 cut(s)	19, 466, 790, 1218
BsiHKCI	CYCGRG	1 cut(s)	830
BsiSI	CCGG	5 cut(s)	441, 574, 730, 948, 1144
BslFI	GGGAC	1 cut(s)	1118
BslI	CCNNNNNNNGG	1 cut(s)	1225
BsmAI	GTCTC	3 cut(s)	32, 334, 687
BsmBI	CGTCTC	1 cut(s)	687
BsmFI	GGGAC	1 cut(s)	1118
BsnI	GGCC	4 cut(s)	134, 144, 267, 573
BsoBI	CYCGRG	1 cut(s)	830
Bsp1286I	GDGCHC	6 cut(s)	19, 130, 466, 790, 831, 1218
Bsp1407I	TGTACA	1 cut(s)	648
Bsp143I	GATC	5 cut(s)	553, 664, 799, 1000, 1290
Bsp68I	TCGCGA	1 cut(s)	558
BspACI	CCGC	8 cut(s)	75, 141, 185, 429, 454, 1102, 1254, 1311
BspANI	GGCC	4 cut(s)	134, 144, 267, 573
BspCNI	CTCAG	2 cut(s)	867, 1033
BspFNI	CGCG	2 cut(s)	141, 558
BspLI	GGNNCC	3 cut(s)	1106, 1107, 1315
BspMAI	CTGCAG	2 cut(s)	1417, 1428
BspPI	GGATC	1 cut(s)	1285
BspQI	GCTCTTC	1 cut(s)	1040
BsrBI	CCGCTC	1 cut(s)	431
BsrFI	RCCGGY	1 cut(s)	573
BsrGI	TGTACA	1 cut(s)	648
BsrI	ACTGG	1 cut(s)	987
BssAI	RCCGGY	1 cut(s)	573
BssECI	CCNNGG	2 cut(s)	129, 1224
BssMI	GATC	5 cut(s)	553, 664, 799, 1000, 1290
BssNAI	GTATAC	1 cut(s)	1170
BssNI	GRCGYC	1 cut(s)	378
BssSI	CACGAG	1 cut(s)	22
Bst1107I	GTATAC	1 cut(s)	1170
Bst2BI	CACGAG	1 cut(s)	22
Bst2UI	CCWGG	3 cut(s)	131, 424, 745
Bst4CI	ACNGT	3 cut(s)	842, 1025, 1273
Bst6I	CTCTTC	4 cut(s)	173, 183, 233, 1040
BstACI	GRCGYC	1 cut(s)	378
BstAPI	GCANNNNNTGC	1 cut(s)	1205
BstAUI	TGTACA	1 cut(s)	648
BstDEI	CTNAG	6 cut(s)	370, 539, 854, 909, 1041, 1329
BstF5I	GGATG	3 cut(s)	313, 616, 1018
BstFNI	CGCG	2 cut(s)	141, 558
BstH2I	RGCGCY	1 cut(s)	161
BstHHI	GCGC	3 cut(s)	160, 242, 502
BstKTI	GATC	5 cut(s)	556, 667, 802, 1003, 1293
BstMAI	GTCTC	3 cut(s)	32, 334, 687
BstMBI	GATC	5 cut(s)	553, 664, 799, 1000, 1290
BstMWI	GCNNNNNNNGC	2 cut(s)	1205, 1418
BstNI	CCWGG	3 cut(s)	131, 424, 745
BstNSI	RCATGY	3 cut(s)	240, 289, 352
BstSCI	CCNGG	7 cut(s)	129, 422, 440, 728, 743, 947, 1143
BstSFI	CTRYAG	2 cut(s)	1413, 1424
BstUI	CGCG	2 cut(s)	141, 558
BstV1I	GCAGC	1 cut(s)	1399
BstX2I	RGATCY	1 cut(s)	1000
BstYI	RGATCY	1 cut(s)	1000
BstZ17I	GTATAC	1 cut(s)	1170
BsuRI	GGCC	4 cut(s)	134, 144, 267, 573
BtgZI	GCGATG	2 cut(s)	25, 573
BtsCI	GGATG	3 cut(s)	313, 616, 1018
BtsI	GCAGTG	3 cut(s)	202, 975, 1421
BtsIMutI	CAGTG	5 cut(s)	202, 776, 975, 980, 1421
BtuMI	TCGCGA	1 cut(s)	558
CfoI	GCGC	3 cut(s)	160, 242, 502
Cfr10I	RCCGGY	1 cut(s)	573
Cfr13I	GGNCC	2 cut(s)	426, 1105
CseI	GACGC	1 cut(s)	386
Csp6I	GTAC	4 cut(s)	352, 445, 581, 649
CviQI	GTAC	4 cut(s)	352, 445, 581, 649
DdeI	CTNAG	6 cut(s)	370, 539, 854, 909, 1041, 1329
DpnI	GATC	5 cut(s)	555, 666, 801, 1002, 1292
DpnII	GATC	5 cut(s)	553, 664, 799, 1000, 1290
DraI	TTTAAA	1 cut(s)	1188
DrdI	GACNNNNNNGTC	1 cut(s)	326
DseDI	GACNNNNNNGTC	1 cut(s)	326
EaeI	YGGCCR	3 cut(s)	132, 142, 571
Eam1104I	CTCTTC	4 cut(s)	173, 183, 233, 1040
EarI	CTCTTC	4 cut(s)	173, 183, 233, 1040
Ecl136II	GAGCTC	2 cut(s)	464, 788
Eco147I	AGGCCT	1 cut(s)	267
Eco24I	GRGCYC	4 cut(s)	130, 466, 790, 831
Eco47I	GGWCC	2 cut(s)	426, 1105
Eco47III	AGCGCT	1 cut(s)	159
Eco53kI	GAGCTC	2 cut(s)	464, 788
Eco57I	CTGAAG	1 cut(s)	1131
Eco88I	CYCGRG	1 cut(s)	830
EcoICRI	GAGCTC	2 cut(s)	464, 788
EcoO109I	RGGNCCY	1 cut(s)	1105
EcoRI	GAATTC	1 cut(s)	748
EcoRII	CCWGG	3 cut(s)	129, 422, 743
EcoT22I	ATGCAT	1 cut(s)	1300
EcoT38I	GRGCYC	4 cut(s)	130, 466, 790, 831
Esp3I	CGTCTC	1 cut(s)	687
FaqI	GGGAC	1 cut(s)	1118
FauI	CCCGC	3 cut(s)	82, 1095, 1247
FauNDI	CATATG	1 cut(s)	1300
FbaI	TGATCA	1 cut(s)	664
FblI	GTMKAC	2 cut(s)	778, 1169
Fnu4HI	GCNGC	4 cut(s)	142, 1312, 1413, 1427
FokI	GGATG	3 cut(s)	300, 623, 1025
FriOI	GRGCYC	4 cut(s)	130, 466, 790, 831
Fsp4HI	GCNGC	4 cut(s)	142, 1312, 1413, 1427
GlaI	GCGC	3 cut(s)	159, 241, 501
GluI	GCNGC	4 cut(s)	142, 1312, 1413, 1427
GsaI	CCCAGC	2 cut(s)	87, 1102
GsuI	CTGGAG	1 cut(s)	1143
HaeII	RGCGCY	1 cut(s)	161
HaeIII	GGCC	4 cut(s)	134, 144, 267, 573
HapII	CCGG	5 cut(s)	441, 574, 730, 948, 1144
HgaI	GACGC	1 cut(s)	386
HhaI	GCGC	3 cut(s)	160, 242, 502
Hin1I	GRCGYC	1 cut(s)	378
Hin6I	GCGC	3 cut(s)	158, 240, 500
HinP1I	GCGC	3 cut(s)	158, 240, 500
HincII	GTYRAC	1 cut(s)	779
HindII	GTYRAC	1 cut(s)	779
HindIII	AAGCTT	1 cut(s)	990
HinfI	GANTC	3 cut(s)	457, 725, 733
HpaII	CCGG	5 cut(s)	441, 574, 730, 948, 1144
HphI	GGTGA	2 cut(s)	412, 1277
Hpy166II	GTNNAC	5 cut(s)	583, 622, 779, 1074, 1170
Hpy188I	TCNGA	4 cut(s)	39, 1000, 1042, 1250
Hpy188III	TCNNGA	5 cut(s)	317, 557, 1058, 1160, 1358
Hpy8I	GTNNAC	5 cut(s)	583, 622, 779, 1074, 1170
Hpy99I	CGWCG	1 cut(s)	380
HpyAV	CCTTC	5 cut(s)	71, 80, 119, 700, 1183
HpyCH4III	ACNGT	3 cut(s)	842, 1025, 1273
HpyCH4IV	ACGT	1 cut(s)	624
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1205, 1418
HpyF3I	CTNAG	6 cut(s)	370, 539, 854, 909, 1041, 1329
HpySE526I	ACGT	1 cut(s)	624
Hsp92I	GRCGYC	1 cut(s)	378
HspAI	GCGC	3 cut(s)	158, 240, 500
KflI	GGGWCCC	1 cut(s)	1105
KroI	GCCGGC	1 cut(s)	573
KroNI	GCCGGC	1 cut(s)	575
Ksp22I	TGATCA	1 cut(s)	664
Kzo9I	GATC	5 cut(s)	553, 664, 799, 1000, 1290
LguI	GCTCTTC	1 cut(s)	1040
LmnI	GCTCC	3 cut(s)	785, 1162, 1319
Lsp1109I	GCAGC	1 cut(s)	1399
LweI	GCATC	1 cut(s)	601
MaeII	ACGT	1 cut(s)	624
MaeIII	GTNAC	5 cut(s)	418, 904, 973, 1025, 1265
MalI	GATC	5 cut(s)	555, 666, 801, 1002, 1292
MbiI	CCGCTC	1 cut(s)	431
MboI	GATC	5 cut(s)	553, 664, 799, 1000, 1290
MboII	GAAGA	7 cut(s)	160, 170, 220, 420, 858, 1027, 1124
MfeI	CAATTG	1 cut(s)	469
MflI	RGATCY	1 cut(s)	1000
MhlI	GDGCHC	6 cut(s)	19, 130, 466, 790, 831, 1218
MlsI	TGGCCA	1 cut(s)	134
MluCI	AATT	6 cut(s)	469, 748, 963, 1136, 1150, 1347
MluNI	TGGCCA	1 cut(s)	134
MlyI	GAGTC	1 cut(s)	466
MmeI	TCCRAC	2 cut(s)	283, 357
Mox20I	TGGCCA	1 cut(s)	134
Mph1103I	ATGCAT	1 cut(s)	1300
MroNI	GCCGGC	1 cut(s)	573
MscI	TGGCCA	1 cut(s)	134
MseI	TTAA	2 cut(s)	987, 1187
MslI	CAYNNNNRTG	3 cut(s)	644, 822, 1299
Msp20I	TGGCCA	1 cut(s)	134
MspA1I	CMGCKG	3 cut(s)	388, 454, 1102
MspI	CCGG	5 cut(s)	441, 574, 730, 948, 1144
MspR9I	CCNGG	7 cut(s)	131, 424, 442, 730, 745, 949, 1145
MunI	CAATTG	1 cut(s)	469
MvaI	CCWGG	3 cut(s)	131, 424, 745
MvnI	CGCG	2 cut(s)	141, 558
MwoI	GCNNNNNNNGC	2 cut(s)	1205, 1418
NaeI	GCCGGC	1 cut(s)	575
NciI	CCSGG	4 cut(s)	442, 730, 949, 1145
NdeI	CATATG	1 cut(s)	1300
NdeII	GATC	5 cut(s)	553, 664, 799, 1000, 1290
NgoMIV	GCCGGC	1 cut(s)	573
NlaIV	GGNNCC	3 cut(s)	1106, 1107, 1315
NmeAIII	GCCGAG	2 cut(s)	93, 1205
NmuCI	GTSAC	4 cut(s)	418, 904, 973, 1265
NruI	TCGCGA	1 cut(s)	558
NsiI	ATGCAT	1 cut(s)	1300
NspI	RCATGY	3 cut(s)	240, 289, 352
PaeI	GCATGC	1 cut(s)	240
PaeR7I	CTCGAG	1 cut(s)	830
PceI	AGGCCT	1 cut(s)	267
PciI	ACATGT	1 cut(s)	348
PciSI	GCTCTTC	1 cut(s)	1040
PdiI	GCCGGC	1 cut(s)	575
PfeI	GAWTC	2 cut(s)	725, 733
PflFI	GACNNNGTC	1 cut(s)	1271
PfoI	TCCNGGA	2 cut(s)	728, 743
PkrI	GCNGC	4 cut(s)	143, 1313, 1414, 1428
PleI	GAGTC	1 cut(s)	465
PpsI	GAGTC	1 cut(s)	465
PpuMI	RGGWCCY	1 cut(s)	1105
PscI	ACATGT	1 cut(s)	348
Psp124BI	GAGCTC	2 cut(s)	466, 790
Psp5II	RGGWCCY	1 cut(s)	1105
Psp6I	CCWGG	3 cut(s)	129, 422, 743
PspFI	CCCAGC	2 cut(s)	83, 1098
PspGI	CCWGG	3 cut(s)	129, 422, 743
PspN4I	GGNNCC	3 cut(s)	1106, 1107, 1315
PspPI	GGNCC	2 cut(s)	426, 1105
PspPPI	RGGWCCY	1 cut(s)	1105
PspXI	VCTCGAGB	1 cut(s)	830
PstI	CTGCAG	2 cut(s)	1417, 1428
PsuI	RGATCY	1 cut(s)	1000
PsyI	GACNNNGTC	1 cut(s)	1271
PvuII	CAGCTG	1 cut(s)	388
RruI	TCGCGA	1 cut(s)	558
RsaI	GTAC	4 cut(s)	353, 446, 582, 650
RsaNI	GTAC	4 cut(s)	352, 445, 581, 649
RseI	CAYNNNNRTG	3 cut(s)	644, 822, 1299
SacI	GAGCTC	2 cut(s)	466, 790
SalI	GTCGAC	1 cut(s)	777
SapI	GCTCTTC	1 cut(s)	1040
SaqAI	TTAA	2 cut(s)	987, 1187
SatI	GCNGC	4 cut(s)	142, 1312, 1413, 1427
Sau3AI	GATC	5 cut(s)	553, 664, 799, 1000, 1290
Sau96I	GGNCC	2 cut(s)	426, 1105
SchI	GAGTC	1 cut(s)	466
ScrFI	CCNGG	7 cut(s)	131, 424, 442, 730, 745, 949, 1145
SduI	GDGCHC	6 cut(s)	19, 130, 466, 790, 831, 1218
SfaNI	GCATC	1 cut(s)	601
SfcI	CTRYAG	2 cut(s)	1413, 1424
Sfr274I	CTCGAG	1 cut(s)	830
SinI	GGWCC	2 cut(s)	426, 1105
SlaI	CTCGAG	1 cut(s)	830
SmiMI	CAYNNNNRTG	3 cut(s)	644, 822, 1299
SmlI	CTYRAG	4 cut(s)	789, 830, 1239, 1385
SmoI	CTYRAG	4 cut(s)	789, 830, 1239, 1385
SphI	GCATGC	1 cut(s)	240
Sse9I	AATT	6 cut(s)	469, 748, 963, 1136, 1150, 1347
SseBI	AGGCCT	1 cut(s)	267
SsiI	CCGC	8 cut(s)	75, 141, 185, 429, 454, 1102, 1254, 1311
SspI	AATATT	1 cut(s)	1092
SstI	GAGCTC	2 cut(s)	466, 790
StuI	AGGCCT	1 cut(s)	267
StyD4I	CCNGG	7 cut(s)	129, 422, 440, 728, 743, 947, 1143
TaaI	ACNGT	3 cut(s)	842, 1025, 1273
TaiI	ACGT	1 cut(s)	627
TaqI	TCGA	5 cut(s)	393, 460, 778, 831, 1057
TasI	AATT	6 cut(s)	469, 748, 963, 1136, 1150, 1347
TatI	WGTACW	2 cut(s)	580, 648
TauI	GCSGC	2 cut(s)	144, 1314
TfiI	GAWTC	2 cut(s)	725, 733
Tru1I	TTAA	2 cut(s)	987, 1187
Tru9I	TTAA	2 cut(s)	987, 1187
TscAI	CASTG	5 cut(s)	209, 776, 982, 987, 1428
TseFI	GTSAC	4 cut(s)	418, 904, 973, 1265
TseI	GCWGC	2 cut(s)	1412, 1426
Tsp45I	GTSAC	4 cut(s)	418, 904, 973, 1265
TspDTI	ATGAA	2 cut(s)	411, 1223
TspGWI	ACGGA	1 cut(s)	467
TspRI	CASTG	5 cut(s)	209, 776, 982, 987, 1428
Tth111I	GACNNNGTC	1 cut(s)	1271
VpaK11BI	GGWCC	2 cut(s)	426, 1105
XapI	RAATTY	2 cut(s)	748, 1150
XceI	RCATGY	3 cut(s)	240, 289, 352
XhoI	CTCGAG	1 cut(s)	830
XmiI	GTMKAC	2 cut(s)	778, 1169
Zsp2I	ATGCAT	1 cut(s)	1300

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.