Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001522

Physical Location & Seq

Genomic Coordinates Forward (+)

6111483 .. 6113260

Gene Structure 1778 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ22475

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1473 bp

ATGCTACGTCCATGTGGTCGCGCGTGTCATAGAACCTTCACCTCAATCAACCATCCGGTTCTTCCCACACCTCCCCGCCTCAACCTGCAAACAAATAACCTTCTCGGCGAAGTAGGGGCCCTGGCCACGCGCGGCCAACTCAACGAAGCACTCTCACTCTTCTACGCTCTTCAAACTCACTGCAACCAAACCTACGCCACTCTTTTCCACGCATGTGCTCGCCACTACTCCCTCCAACAAGGCCTCTCTCTGCACCATTACATGGTCGCCCACAACCCCATTACTCCTCCAGACCTCTTTGTCTCCAACCACCTCATCAACATGTACGCTAAATTTGGCTACTTAGACCATGCCCACCAACTGTTCGATGAAATGCCCAGAAGAAACCTCGTCACCTGGACCGCTCTCATTTCCGGAGACGAGGCATGCAAGGTGTTTAGAAGCATGGAATCCCGGAATCTTATATCGTGGAATTCCATGATTGCAGGGTTTCAGTGTCGTGGACGTGGAGCTCAAGCTATTGATCTGTTTGTACAAATGCACCTTGATGGACTCGAGTTTGACCGTGCCACGCTTCTCAGCGTCTTATCTTCCTTGAATGGAGTAAATGACATTGATGATGTTGTGGTTACTAAGTTTTGTTATCAATTGCATTGTCTGGTTATCAAAACCGGGTTTATATTAGGAATTGAAGTGGTCACTGCGCTGGTTAAAGCTTATTCAGATCTTGGAGGGGATGCTGCTGACTGTTACAGGCTCTTCTCTGAGACAAGCTGTCATCGGGATATTGTTGCGTGGACGGGCATTATGACAATATTTTCCGAGCGGGACCCTGAAGAAGCACTCTCCCTTTTTCGTCAATTACGCCGGGAGAATTTAGCTCCAGACAGGTATACCTTCTCCATTGTTTTAAAAGCCTACGCAAGCCTTGCAACCGAGCGCCATGCCTCGGCAGTTCATTCTCAAGTTATCAAAGGCGGGTTTGGGGGTGACACAGTCCTTGCAAACGCCTTGATCCATGCATATGCTCGGTGCGGCTCCATTTCCTCGTCTAAGCAAATTTTTGATGGAATTGAGTTTCGTGATGTTGTTTCTTGGAACACAATGCTCAAGGCTTATGCCTTGTATGGACAAGCTGCAGAGGCACTGCAGCTTTTTTCACAAATGGACGTTAAACCTGATTCTGCTACATTTGTTTCTCTCTGTGCTTGTAGTCATGCTGGACTGGTAGAAGAAGGAACCAGAATCTTTGACTCCATGCTTGAGAGATATGGCATTGTACCTCTATGTGATCATTATGCCTGCATGGTTGACATTCTTGGTCGAGCTGGACGAGTTGGTGAGGCTGAGAAGCTTGTAAGTAGAATGCCAATGGAGCCCGATTCTGTTGTTTGGAGTGCACTCCTTGGATCATGTAGGAAGCATGGAAATACACAGTTGGCCAAGTGGAGTTGGCTCCAGAGGGTTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

490

Amino Acids

54.59

Weight (kDa)

6.71

Isoelectric Point (pI)

44.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	97 - 139	1.7e-06	PPR repeat family
PPR_2	PF13041	262 - 308	4.2e-08	PPR repeat family
PPR_2	PF13041	361 - 401	2.8e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71420
fragaria_vesca	FvH4_2g00530 FvH4_2g00530 FvH4_2g00560 FvH4_2g00560 FvH4_2g00560 FvH4_2g00560
malus_domestica	MD05G1002500.v1.1
prunus_persica	Prupe.8G005700_v2.0.a1
pyrus_communis	pycom05g00240
rosa_chinensis	RchiOBHm_Chr6g0250571 RchiOBHm_Chr6g0250641 RchiOBHm_Chr6g0250661 RchiOBHm_Chr6g0250741 RchiOBHm_Chr6g0250751 RchiOBHm_Chr6g0250881 RchiOBHm_Chr6g0250901 RchiOBHm_Chr6g0250941 RchiOBHm_Chr6g0251021
rosa_laevigata	RLG00000001886 RLG00000015490 RLG00000015491 RLG00000015495 RLG00000015496 RLG00000015497 RLG00000015516 RLG00000015517 RLG00000015521 RLG00000015534
rosa_multiflora	Rmu_co8213794.1_g000001 Rmu_co8225142.1_g000001 Rmu_co8465043.1_g000001 Rmu_sc0001209.1_g000010 Rmu_sc0001209.1_g000028 Rmu_sc0001209.1_g000030 Rmu_sc0003527.1_g000008 Rmu_sc0026821.1_g000002 Rmu_sc0031313.1_g000001 Rmu_sc0037610.1_g000001
rosa_roxburghii	Rroxscaffold_7G00217150
rosa_rugosa	Rorug05G0498000 Rorug05G0499000 Rorug05G0499100 Rorug05G0499400
rosa_samantha	Rh6AG006800 Rh6AG007100 Rh6BG003500 Rh6BG003800 Rh6DG005100
rosa_wichuraiana	Rw6G000790 Rw6G000840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	299
Acc36I	ACCTGC	1 cut(s)	93
AccB7I	CCANNNNNTGG	1 cut(s)	262
AccBSI	CCGCTC	2 cut(s)	404, 826
AccI	GTMKAC	1 cut(s)	893
AccII	CGCG	4 cut(s)	21, 23, 130, 132
AccIII	TCCGGA	1 cut(s)	413
AciI	CCGC	6 cut(s)	76, 132, 402, 826, 978, 1035
AclWI	GGATC	2 cut(s)	1009, 1417
AcoI	YGGCCR	3 cut(s)	123, 133, 1440
AcsI	RAATTY	4 cut(s)	332, 472, 874, 1059
AcuI	CTGAAG	1 cut(s)	855
AfaI	GTAC	3 cut(s)	326, 534, 1281
AfiI	CCNNNNNNNGG	2 cut(s)	262, 949
AflIII	ACRYGT	1 cut(s)	321
AgsI	TTSAA	3 cut(s)	173, 598, 692
AhdI	GACNNNNNGTC	1 cut(s)	774
AjiI	CACGTC	1 cut(s)	506
AjnI	CCWGG	2 cut(s)	120, 395
AleI	CACNNNNGTG	1 cut(s)	213
AluBI	AGCT	9 cut(s)	512, 518, 716, 774, 881, 1136, 1153, 1328, 1354
AluI	AGCT	9 cut(s)	512, 518, 716, 774, 881, 1136, 1153, 1328, 1354
Alw21I	GWGCWC	3 cut(s)	220, 514, 1402
Alw26I	GTCTC	3 cut(s)	307, 411, 761
Alw44I	GTGCAC	1 cut(s)	1398
AlwI	GGATC	2 cut(s)	1009, 1417
Ama87I	CYCGRG	1 cut(s)	554
Aor13HI	TCCGGA	1 cut(s)	413
AoxI	GGCC	5 cut(s)	117, 123, 133, 241, 1440
ApaI	GGGCCC	1 cut(s)	121
ApaLI	GTGCAC	1 cut(s)	1398
ApeKI	GCWGC	3 cut(s)	740, 1136, 1150
ApoI	RAATTY	4 cut(s)	332, 472, 874, 1059
AspLEI	GCGC	4 cut(s)	23, 132, 706, 942
AspS9I	GGNCC	4 cut(s)	117, 118, 399, 829
AsuC2I	CCSGG	3 cut(s)	454, 673, 869
AsuHPI	GGTGA	4 cut(s)	31, 385, 1001, 1352
AvaI	CYCGRG	1 cut(s)	554
AvaII	GGWCC	2 cut(s)	399, 829
BaeGI	GKGCMC	2 cut(s)	121, 1402
BalI	TGGCCA	2 cut(s)	125, 1442
BanII	GRGCYC	3 cut(s)	121, 514, 1380
Bbv12I	GWGCWC	3 cut(s)	220, 514, 1402
BbvI	GCAGC	3 cut(s)	727, 1123, 1162
BccI	CCATC	3 cut(s)	60, 542, 1061
BcgI	CGANNNNNNTGC	2 cut(s)	926, 960
BciT130I	CCWGG	2 cut(s)	122, 397
BclI	TGATCA	1 cut(s)	1291
BcnI	CCSGG	3 cut(s)	454, 673, 869
BcoDI	GTCTC	3 cut(s)	307, 411, 761
BfmI	CTRYAG	2 cut(s)	1137, 1148
BfoI	RGCGCY	1 cut(s)	943
BfuAI	ACCTGC	1 cut(s)	93
BglII	AGATCT	1 cut(s)	724
BisI	GCNGC	5 cut(s)	133, 741, 1036, 1137, 1151
BlsI	GCNGC	5 cut(s)	134, 742, 1037, 1138, 1152
Bme1390I	CCNGG	5 cut(s)	122, 397, 454, 673, 869
Bme18I	GGWCC	2 cut(s)	399, 829
BmeRI	GACNNNNNGTC	1 cut(s)	774
BmeT110I	CYCGRG	1 cut(s)	554
BmgBI	CACGTC	1 cut(s)	506
BmgT120I	GGNCC	4 cut(s)	117, 118, 399, 829
BmiI	GGNNCC	8 cut(s)	118, 119, 830, 831, 1039, 1240, 1377, 1457
BmrFI	CCNGG	5 cut(s)	122, 397, 454, 673, 869
BmsI	GCATC	1 cut(s)	727
BpmI	CTGGAG	3 cut(s)	273, 867, 1442
BpuEI	CTTGAG	4 cut(s)	498, 948, 1094, 1283
BpuMI	CCSGG	3 cut(s)	454, 673, 869
BsaJI	CCNNGG	3 cut(s)	120, 948, 1405
BsaWI	WCCGGW	2 cut(s)	55, 413
Bsc4I	CCNNNNNNNGG	2 cut(s)	262, 949
Bse1I	ACTGG	1 cut(s)	1230
BseAI	TCCGGA	1 cut(s)	413
BseBI	CCWGG	2 cut(s)	122, 397
BseDI	CCNNGG	3 cut(s)	120, 948, 1405
BseGI	GGATG	2 cut(s)	52, 742
BseLI	CCNNNNNNNGG	2 cut(s)	262, 949
BseMII	CTCAG	3 cut(s)	592, 756, 1338
BseNI	ACTGG	1 cut(s)	1230
BseRI	GAGGAG	1 cut(s)	276
BseSI	GKGCMC	2 cut(s)	121, 1402
BseXI	GCAGC	3 cut(s)	727, 1123, 1162
BsgI	GTGCAG	1 cut(s)	236
Bsh1236I	CGCG	4 cut(s)	21, 23, 130, 132
BshFI	GGCC	5 cut(s)	119, 125, 135, 243, 1442
BsiHKAI	GWGCWC	3 cut(s)	220, 514, 1402
BsiHKCI	CYCGRG	1 cut(s)	554
BsiSI	CCGG	5 cut(s)	56, 414, 454, 672, 868
BslFI	GGGAC	1 cut(s)	842
BslI	CCNNNNNNNGG	2 cut(s)	262, 949
BsmAI	GTCTC	3 cut(s)	307, 411, 761
BsmBI	CGTCTC	1 cut(s)	411
BsmFI	GGGAC	1 cut(s)	842
BsmI	GAATGC	1 cut(s)	1371
BsnI	GGCC	5 cut(s)	119, 125, 135, 243, 1442
BsoBI	CYCGRG	1 cut(s)	554
Bsp120I	GGGCCC	1 cut(s)	117
Bsp1286I	GDGCHC	5 cut(s)	121, 220, 514, 1380, 1402
Bsp13I	TCCGGA	1 cut(s)	413
Bsp1407I	TGTACA	1 cut(s)	532
Bsp143I	GATC	5 cut(s)	523, 724, 1014, 1291, 1409
BspACI	CCGC	6 cut(s)	76, 132, 402, 826, 978, 1035
BspANI	GGCC	5 cut(s)	119, 125, 135, 243, 1442
BspCNI	CTCAG	3 cut(s)	591, 757, 1339
BspEI	TCCGGA	1 cut(s)	413
BspFNI	CGCG	4 cut(s)	21, 23, 130, 132
BspLI	GGNNCC	8 cut(s)	118, 119, 830, 831, 1039, 1240, 1377, 1457
BspMAI	CTGCAG	2 cut(s)	1141, 1152
BspMI	ACCTGC	1 cut(s)	93
BspPI	GGATC	2 cut(s)	1009, 1417
BspQI	GCTCTTC	2 cut(s)	174, 764
BsrBI	CCGCTC	2 cut(s)	404, 826
BsrGI	TGTACA	1 cut(s)	532
BsrI	ACTGG	1 cut(s)	1230
BssECI	CCNNGG	3 cut(s)	120, 948, 1405
BssMI	GATC	5 cut(s)	523, 724, 1014, 1291, 1409
BssNAI	GTATAC	1 cut(s)	894
BssT1I	CCWWGG	1 cut(s)	1405
Bst1107I	GTATAC	1 cut(s)	894
Bst2UI	CCWGG	2 cut(s)	122, 397
Bst4CI	ACNGT	5 cut(s)	363, 566, 749, 997, 1437
Bst6I	CTCTTC	3 cut(s)	164, 174, 764
BstAPI	GCANNNNNTGC	1 cut(s)	929
BstAUI	TGTACA	1 cut(s)	532
BstC8I	GCNNGC	4 cut(s)	220, 427, 925, 1303
BstDEI	CTNAG	6 cut(s)	343, 578, 633, 765, 1053, 1347
BstF5I	GGATG	2 cut(s)	52, 742
BstFNI	CGCG	4 cut(s)	21, 23, 130, 132
BstH2I	RGCGCY	1 cut(s)	943
BstHHI	GCGC	4 cut(s)	23, 132, 706, 942
BstKTI	GATC	5 cut(s)	526, 727, 1017, 1294, 1412
BstMAI	GTCTC	3 cut(s)	307, 411, 761
BstMBI	GATC	5 cut(s)	523, 724, 1014, 1291, 1409
BstMWI	GCNNNNNNNGC	3 cut(s)	929, 1142, 1375
BstNI	CCWGG	2 cut(s)	122, 397
BstNSI	RCATGY	3 cut(s)	216, 325, 429
BstSCI	CCNGG	5 cut(s)	120, 395, 452, 671, 867
BstSFI	CTRYAG	2 cut(s)	1137, 1148
BstSLI	GKGCMC	2 cut(s)	121, 1402
BstUI	CGCG	4 cut(s)	21, 23, 130, 132
BstV1I	GCAGC	3 cut(s)	727, 1123, 1162
BstX2I	RGATCY	1 cut(s)	724
BstYI	RGATCY	1 cut(s)	724
BstZ17I	GTATAC	1 cut(s)	894
BsuRI	GGCC	5 cut(s)	119, 125, 135, 243, 1442
BtrI	CACGTC	1 cut(s)	506
BtsCI	GGATG	2 cut(s)	52, 742
BtsI	GCAGTG	3 cut(s)	178, 699, 1145
BtsIMutI	CAGTG	4 cut(s)	178, 500, 699, 1145
BveI	ACCTGC	1 cut(s)	93
Cac8I	GCNNGC	4 cut(s)	220, 427, 925, 1303
CfoI	GCGC	4 cut(s)	23, 132, 706, 942
Cfr13I	GGNCC	4 cut(s)	117, 118, 399, 829
CseI	GACGC	1 cut(s)	571
Csp6I	GTAC	3 cut(s)	325, 533, 1280
CviQI	GTAC	3 cut(s)	325, 533, 1280
DdeI	CTNAG	6 cut(s)	343, 578, 633, 765, 1053, 1347
DpnI	GATC	5 cut(s)	525, 726, 1016, 1293, 1411
DpnII	GATC	5 cut(s)	523, 724, 1014, 1291, 1409
DraI	TTTAAA	1 cut(s)	912
DrdI	GACNNNNNNGTC	1 cut(s)	299
DriI	GACNNNNNGTC	1 cut(s)	774
DseDI	GACNNNNNNGTC	1 cut(s)	299
EaeI	YGGCCR	3 cut(s)	123, 133, 1440
Eam1104I	CTCTTC	3 cut(s)	164, 174, 764
Eam1105I	GACNNNNNGTC	1 cut(s)	774
EarI	CTCTTC	3 cut(s)	164, 174, 764
Ecl136II	GAGCTC	1 cut(s)	512
Eco130I	CCWWGG	1 cut(s)	1405
Eco147I	AGGCCT	1 cut(s)	243
Eco24I	GRGCYC	3 cut(s)	121, 514, 1380
Eco47I	GGWCC	2 cut(s)	399, 829
Eco53kI	GAGCTC	1 cut(s)	512
Eco57I	CTGAAG	1 cut(s)	855
Eco88I	CYCGRG	1 cut(s)	554
EcoICRI	GAGCTC	1 cut(s)	512
EcoO109I	RGGNCCY	3 cut(s)	117, 118, 829
EcoRI	GAATTC	1 cut(s)	472
EcoRII	CCWGG	2 cut(s)	120, 395
EcoT14I	CCWWGG	1 cut(s)	1405
EcoT22I	ATGCAT	1 cut(s)	1024
EcoT38I	GRGCYC	3 cut(s)	121, 514, 1380
ErhI	CCWWGG	1 cut(s)	1405
Esp3I	CGTCTC	1 cut(s)	411
FaqI	GGGAC	1 cut(s)	842
FauI	CCCGC	3 cut(s)	83, 819, 971
FauNDI	CATATG	1 cut(s)	1024
FbaI	TGATCA	1 cut(s)	1291
FblI	GTMKAC	1 cut(s)	893
Fnu4HI	GCNGC	5 cut(s)	133, 741, 1036, 1137, 1151
FokI	GGATG	2 cut(s)	39, 749
FriOI	GRGCYC	3 cut(s)	121, 514, 1380
Fsp4HI	GCNGC	5 cut(s)	133, 741, 1036, 1137, 1151
GlaI	GCGC	4 cut(s)	22, 131, 705, 941
GluI	GCNGC	5 cut(s)	133, 741, 1036, 1137, 1151
GsuI	CTGGAG	3 cut(s)	273, 867, 1442
HaeII	RGCGCY	1 cut(s)	943
HaeIII	GGCC	5 cut(s)	119, 125, 135, 243, 1442
HapII	CCGG	5 cut(s)	56, 414, 454, 672, 868
HgaI	GACGC	1 cut(s)	571
HhaI	GCGC	4 cut(s)	23, 132, 706, 942
Hin6I	GCGC	4 cut(s)	21, 130, 704, 940
HinP1I	GCGC	4 cut(s)	21, 130, 704, 940
HincII	GTYRAC	1 cut(s)	1312
HindII	GTYRAC	1 cut(s)	1312
HindIII	AAGCTT	2 cut(s)	714, 1352
HinfI	GANTC	7 cut(s)	449, 457, 552, 1181, 1245, 1253, 1382
HpaII	CCGG	5 cut(s)	56, 414, 454, 672, 868
HphI	GGTGA	4 cut(s)	31, 385, 1001, 1352
Hpy166II	GTNNAC	5 cut(s)	503, 798, 894, 1312, 1400
Hpy188I	TCNGA	3 cut(s)	724, 766, 823
Hpy188III	TCNNGA	6 cut(s)	290, 414, 782, 884, 1082, 1459
Hpy8I	GTNNAC	5 cut(s)	503, 798, 894, 1312, 1400
HpyAV	CCTTC	4 cut(s)	46, 110, 907, 1229
HpyCH4III	ACNGT	5 cut(s)	363, 566, 749, 997, 1437
HpyCH4IV	ACGT	3 cut(s)	7, 505, 1170
HpyF10VI	GCNNNNNNNGC	3 cut(s)	929, 1142, 1375
HpyF3I	CTNAG	6 cut(s)	343, 578, 633, 765, 1053, 1347
HpySE526I	ACGT	3 cut(s)	7, 505, 1170
HspAI	GCGC	4 cut(s)	21, 130, 704, 940
KflI	GGGWCCC	1 cut(s)	829
Kpn2I	TCCGGA	1 cut(s)	413
Ksp22I	TGATCA	1 cut(s)	1291
Kzo9I	GATC	5 cut(s)	523, 724, 1014, 1291, 1409
LguI	GCTCTTC	2 cut(s)	174, 764
LmnI	GCTCC	5 cut(s)	509, 886, 1043, 1375, 1461
Lsp1109I	GCAGC	3 cut(s)	727, 1123, 1162
LweI	GCATC	1 cut(s)	727
MaeII	ACGT	3 cut(s)	7, 505, 1170
MaeIII	GTNAC	5 cut(s)	391, 628, 697, 749, 989
MalI	GATC	5 cut(s)	525, 726, 1016, 1293, 1411
MbiI	CCGCTC	2 cut(s)	404, 826
MboI	GATC	5 cut(s)	523, 724, 1014, 1291, 1409
MboII	GAAGA	8 cut(s)	53, 151, 161, 393, 582, 751, 848, 1244
MfeI	CAATTG	1 cut(s)	647
MflI	RGATCY	1 cut(s)	724
MhlI	GDGCHC	5 cut(s)	121, 220, 514, 1380, 1402
MlsI	TGGCCA	2 cut(s)	125, 1442
MluCI	AATT	8 cut(s)	332, 472, 647, 687, 860, 874, 1059, 1071
MluNI	TGGCCA	2 cut(s)	125, 1442
MlyI	GAGTC	2 cut(s)	546, 1247
MmeI	TCCRAC	2 cut(s)	259, 330
Mox20I	TGGCCA	2 cut(s)	125, 1442
Mph1103I	ATGCAT	1 cut(s)	1024
MroI	TCCGGA	1 cut(s)	413
MscI	TGGCCA	2 cut(s)	125, 1442
MseI	TTAA	3 cut(s)	711, 911, 1173
MslI	CAYNNNNRTG	4 cut(s)	213, 320, 546, 1023
Msp20I	TGGCCA	2 cut(s)	125, 1442
MspI	CCGG	5 cut(s)	56, 414, 454, 672, 868
MspR9I	CCNGG	5 cut(s)	122, 397, 454, 673, 869
MunI	CAATTG	1 cut(s)	647
Mva1269I	GAATGC	1 cut(s)	1371
MvaI	CCWGG	2 cut(s)	122, 397
MvnI	CGCG	4 cut(s)	21, 23, 130, 132
MwoI	GCNNNNNNNGC	3 cut(s)	929, 1142, 1375
NciI	CCSGG	3 cut(s)	454, 673, 869
NdeI	CATATG	1 cut(s)	1024
NdeII	GATC	5 cut(s)	523, 724, 1014, 1291, 1409
NlaIV	GGNNCC	8 cut(s)	118, 119, 830, 831, 1039, 1240, 1377, 1457
NmeAIII	GCCGAG	2 cut(s)	84, 929
NmuCI	GTSAC	3 cut(s)	391, 697, 989
NsiI	ATGCAT	1 cut(s)	1024
NspI	RCATGY	3 cut(s)	216, 325, 429
OliI	CACNNNNGTG	1 cut(s)	213
PaeI	GCATGC	1 cut(s)	429
PaeR7I	CTCGAG	1 cut(s)	554
PceI	AGGCCT	1 cut(s)	243
PciI	ACATGT	1 cut(s)	321
PciSI	GCTCTTC	2 cut(s)	174, 764
PcsI	WCGNNNNNNNCGW	1 cut(s)	1330
PctI	GAATGC	1 cut(s)	1371
PfeI	GAWTC	5 cut(s)	449, 457, 1181, 1245, 1382
PflFI	GACNNNGTC	1 cut(s)	995
PflMI	CCANNNNNTGG	1 cut(s)	262
PfoI	TCCNGGA	1 cut(s)	452
PkrI	GCNGC	5 cut(s)	134, 742, 1037, 1138, 1152
PleI	GAGTC	2 cut(s)	546, 1247
PpsI	GAGTC	2 cut(s)	546, 1247
PpuMI	RGGWCCY	1 cut(s)	829
PscI	ACATGT	1 cut(s)	321
Psp124BI	GAGCTC	1 cut(s)	514
Psp5II	RGGWCCY	1 cut(s)	829
Psp6I	CCWGG	2 cut(s)	120, 395
PspGI	CCWGG	2 cut(s)	120, 395
PspN4I	GGNNCC	8 cut(s)	118, 119, 830, 831, 1039, 1240, 1377, 1457
PspOMI	GGGCCC	1 cut(s)	117
PspPI	GGNCC	4 cut(s)	117, 118, 399, 829
PspPPI	RGGWCCY	1 cut(s)	829
PspXI	VCTCGAGB	1 cut(s)	554
PstI	CTGCAG	2 cut(s)	1141, 1152
PsuI	RGATCY	1 cut(s)	724
PsyI	GACNNNGTC	1 cut(s)	995
RsaI	GTAC	3 cut(s)	326, 534, 1281
RsaNI	GTAC	3 cut(s)	325, 533, 1280
RseI	CAYNNNNRTG	4 cut(s)	213, 320, 546, 1023
SacI	GAGCTC	1 cut(s)	514
SapI	GCTCTTC	2 cut(s)	174, 764
SaqAI	TTAA	3 cut(s)	711, 911, 1173
SatI	GCNGC	5 cut(s)	133, 741, 1036, 1137, 1151
Sau3AI	GATC	5 cut(s)	523, 724, 1014, 1291, 1409
Sau96I	GGNCC	4 cut(s)	117, 118, 399, 829
SchI	GAGTC	2 cut(s)	546, 1247
ScrFI	CCNGG	5 cut(s)	122, 397, 454, 673, 869
SduI	GDGCHC	5 cut(s)	121, 220, 514, 1380, 1402
SfaNI	GCATC	1 cut(s)	727
SfcI	CTRYAG	2 cut(s)	1137, 1148
Sfr274I	CTCGAG	1 cut(s)	554
SinI	GGWCC	2 cut(s)	399, 829
SlaI	CTCGAG	1 cut(s)	554
SmiMI	CAYNNNNRTG	4 cut(s)	213, 320, 546, 1023
SmlI	CTYRAG	5 cut(s)	513, 554, 963, 1109, 1262
SmoI	CTYRAG	5 cut(s)	513, 554, 963, 1109, 1262
SphI	GCATGC	1 cut(s)	429
Sse9I	AATT	8 cut(s)	332, 472, 647, 687, 860, 874, 1059, 1071
SseBI	AGGCCT	1 cut(s)	243
SsiI	CCGC	6 cut(s)	76, 132, 402, 826, 978, 1035
SspI	AATATT	1 cut(s)	816
SstI	GAGCTC	1 cut(s)	514
StuI	AGGCCT	1 cut(s)	243
StyD4I	CCNGG	5 cut(s)	120, 395, 452, 671, 867
StyI	CCWWGG	1 cut(s)	1405
TaaI	ACNGT	5 cut(s)	363, 566, 749, 997, 1437
TaiI	ACGT	3 cut(s)	10, 508, 1173
TaqI	TCGA	3 cut(s)	366, 555, 1324
TasI	AATT	8 cut(s)	332, 472, 647, 687, 860, 874, 1059, 1071
TatI	WGTACW	1 cut(s)	532
TauI	GCSGC	2 cut(s)	135, 1038
TfiI	GAWTC	5 cut(s)	449, 457, 1181, 1245, 1382
Tru1I	TTAA	3 cut(s)	711, 911, 1173
Tru9I	TTAA	3 cut(s)	711, 911, 1173
TscAI	CASTG	4 cut(s)	185, 500, 706, 1152
TseFI	GTSAC	3 cut(s)	391, 697, 989
TseI	GCWGC	3 cut(s)	740, 1136, 1150
Tsp45I	GTSAC	3 cut(s)	391, 697, 989
TspDTI	ATGAA	3 cut(s)	384, 947, 1457
TspRI	CASTG	4 cut(s)	185, 500, 706, 1152
Tth111I	GACNNNGTC	1 cut(s)	995
Van91I	CCANNNNNTGG	1 cut(s)	262
VneI	GTGCAC	1 cut(s)	1398
VpaK11BI	GGWCC	2 cut(s)	399, 829
XapI	RAATTY	4 cut(s)	332, 472, 874, 1059
XceI	RCATGY	3 cut(s)	216, 325, 429
XhoI	CTCGAG	1 cut(s)	554
XmiI	GTMKAC	1 cut(s)	893
Zsp2I	ATGCAT	1 cut(s)	1024

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.