Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0001522

Physical Location & Seq

Genomic Coordinates Reverse (-)

67396454 .. 67406056

Gene Structure 9603 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015517

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGGATGTGCTTCAGATTAGTTTTGATGGACTAGAGGAAAAAGATCAACAGATATTCCTACATATTGCTTGTTTGTACAAGGGGGAGGACAGGGATAGTGTGACACAAATACTAGACTATTGCAAGCTAGAACCTGGCATTGGTTTAAAGGTTCTTGAGGAAAAATCTCTCATTACTATTTTTAACAACAAACTGTCGATGCATGATTTGCTACAAGAAATGGGCTTGGAAATAGTTCGTCGAGAGTCCCCTAATGAGCTAGGTAAACGAAGTAGATCATGGTCTCCTGAAGTTATCCACAATGTGCTGAAGAAAAATAAGATTGGTGCAAAGAGCCAATATAGAACCAATGAGTATGCAGTTACCTCGTCTATAGCAAAATGCAAATACATCAATGAGTATCCAGTTGCCACTATCTCGTCTATTAACTGCAATCTTGATGACGCTGCATTTGCCAACTTTGCCTGTTTTCCCTCCTTAGTGGCACTAAATCTGAGTGGAAATAATTTTGTTAAGCTTCCTCCAAGCATCAGGTCCTGTTTGAAGCTTCAGAACATTAATTTAGAGAATTGCAAGATACTTCAAGAGTTGTCAGGACTTCTATTGGGAAATAACACCATTAGCCTTGGCCTTCTTGATAGAATAAAGGGATGTCTTGGCGTCTCCGAGCTTCTCGGAGCGACCTTGGTTTTGAAACCTAGGTTTCGATTGGCGGCGGCGTTTCTTCCTTCGGGTAAGGCGGCGATCGTGGACTACGGCGACGTAGGAAGGGATCTCTGCGGCGATCGTGAGTGTGGCAAGGGATTTTTTCTCAGACCGTGGCAGAGGGTTTTGGTCCAGGTGGTGAGTTCGCTTTTATCGTCTGGGCTGCAGAGGAGTGGGCGAGTCGGATCCAGCGGTGGCGGTTTGGTCTTGAGGTCCGGTGGTTTGGAGGCGGTTTTGCAGCTGTTTGCGGTTGCTCAAAGGCCGGTTTCATCTAGGACCTTCACCTCAATCAACCATCCGGTTTCTCCCAGCCTCAACCTGCAAACGAACAATCTTCTCGGCGAAGTAGGGGCCCTGGCCACGCGCGGCCAACTCAACGAAGCACTCTCACTCTTCTACATTCTTCAACCGCCACCAACTCAAACTCACTCCAACCAAACCTACGCCACTCTCTTCCACGCATGCGCTCGCCACCATTCCCTCCAACAAGGCCTCTCTCTGCACCATTACATGCTTGCCCACAACCTCATCACTCCTCCTGACCTCTTTGTCTCCAACCACCTCATCAACATGTACGCCAAATTTGGCCACTTAGACCATGCCCACCATCTGTTCGATGAAATGCCCAGAAGAAACCTCGTCACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

451

Amino Acids

49.69

Weight (kDa)

8.68

Isoelectric Point (pI)

55.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_ROQ1	PF23282	12 - 83	2.2e-20	Disease resistance protein Roq1-like, winged-helix domain
PPR_2	PF13041	415 - 448	8.2e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001522)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71420
fragaria_vesca	FvH4_2g00530 FvH4_2g00530 FvH4_2g00560 FvH4_2g00560 FvH4_2g00560 FvH4_2g00560
malus_domestica	MD05G1002500.v1.1
prunus_persica	Prupe.8G005700_v2.0.a1
pyrus_communis	pycom05g00240
rosa_chinensis	RchiOBHm_Chr6g0250571 RchiOBHm_Chr6g0250641 RchiOBHm_Chr6g0250661 RchiOBHm_Chr6g0250741 RchiOBHm_Chr6g0250751 RchiOBHm_Chr6g0250881 RchiOBHm_Chr6g0250901 RchiOBHm_Chr6g0250941 RchiOBHm_Chr6g0251021
rosa_laevigata	RLG00000001886 RLG00000015490 RLG00000015491 RLG00000015495 RLG00000015496 RLG00000015497 RLG00000015516 RLG00000015517 RLG00000015521 RLG00000015534
rosa_multiflora	Rmu_co8213794.1_g000001 Rmu_co8225142.1_g000001 Rmu_co8465043.1_g000001 Rmu_sc0001209.1_g000010 Rmu_sc0001209.1_g000028 Rmu_sc0001209.1_g000030 Rmu_sc0003527.1_g000008 Rmu_sc0026821.1_g000002 Rmu_sc0031313.1_g000001 Rmu_sc0037610.1_g000001
rosa_roxburghii	Rroxscaffold_7G00217150
rosa_rugosa	Rorug05G0498000 Rorug05G0499000 Rorug05G0499100 Rorug05G0499400
rosa_samantha	Rh6AG006800 Rh6AG007100 Rh6BG003500 Rh6BG003800 Rh6DG005100
rosa_wichuraiana	Rw6G000790 Rw6G000840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1253
Acc36I	ACCTGC	1 cut(s)	1032
AccII	CGCG	2 cut(s)	1069, 1071
AclWI	GGATC	3 cut(s)	780, 885, 898
AcoI	YGGCCR	3 cut(s)	1062, 1072, 1291
AcsI	RAATTY	1 cut(s)	1286
AcuI	CTGAAG	3 cut(s)	309, 329, 533
AcyI	GRCGYC	1 cut(s)	660
AdeI	CACNNNGTG	1 cut(s)	304
AfaI	GTAC	2 cut(s)	77, 1280
AfiI	CCNNNNNNNGG	1 cut(s)	140
AflIII	ACRYGT	1 cut(s)	1275
AgsI	TTSAA	4 cut(s)	544, 584, 694, 1112
AjnI	CCWGG	3 cut(s)	133, 837, 1059
AjuI	GAANNNNNNNTTGG	2 cut(s)	123, 155
AluBI	AGCT	6 cut(s)	127, 259, 517, 547, 670, 946
AluI	AGCT	6 cut(s)	127, 259, 517, 547, 670, 946
Alw26I	GTCTC	3 cut(s)	288, 667, 1261
AlwI	GGATC	3 cut(s)	780, 885, 898
AlwNI	CAGNNNCTG	1 cut(s)	537
AoxI	GGCC	7 cut(s)	628, 965, 1056, 1062, 1072, 1195, 1291
ApaI	GGGCCC	1 cut(s)	1060
ApeKI	GCWGC	3 cut(s)	446, 868, 943
ApoI	RAATTY	1 cut(s)	1286
ArsI	GACNNNNNNTTYG	4 cut(s)	434, 466, 673, 705
AseI	ATTAAT	1 cut(s)	558
Asp700I	GAANNNNTTC	1 cut(s)	234
AspA2I	CCTAGG	1 cut(s)	698
AspLEI	GCGC	2 cut(s)	1071, 1172
AspS9I	GGNCC	6 cut(s)	534, 835, 918, 981, 1056, 1057
AsuHPI	GGTGA	3 cut(s)	856, 979, 1339
AvaII	GGWCC	4 cut(s)	534, 835, 918, 981
AvrII	CCTAGG	1 cut(s)	698
BaeGI	GKGCMC	1 cut(s)	1060
BalI	TGGCCA	2 cut(s)	1064, 1293
BamHI	GGATCC	1 cut(s)	890
BanII	GRGCYC	1 cut(s)	1060
BbvI	GCAGC	3 cut(s)	433, 855, 955
BccI	CCATC	3 cut(s)	20, 1008, 1320
BceAI	ACGGC	1 cut(s)	772
BcgI	CGANNNNNNTGC	2 cut(s)	348, 382
BciT130I	CCWGG	3 cut(s)	135, 839, 1061
BciVI	GTATCC	1 cut(s)	411
BcoDI	GTCTC	3 cut(s)	288, 667, 1261
BfaI	CTAG	6 cut(s)	32, 113, 128, 260, 699, 978
BfmI	CTRYAG	2 cut(s)	372, 869
BfuAI	ACCTGC	1 cut(s)	1032
BfuI	GTATCC	1 cut(s)	411
BisI	GCNGC	8 cut(s)	447, 714, 717, 741, 781, 869, 944, 1072
BlnI	CCTAGG	1 cut(s)	698
BlsI	GCNGC	8 cut(s)	448, 715, 718, 742, 782, 870, 945, 1073
Bme1390I	CCNGG	3 cut(s)	135, 839, 1061
Bme18I	GGWCC	4 cut(s)	534, 835, 918, 981
BmgT120I	GGNCC	6 cut(s)	534, 835, 918, 981, 1056, 1057
BmiI	GGNNCC	3 cut(s)	892, 1057, 1058
BmrFI	CCNGG	3 cut(s)	135, 839, 1061
BmsI	GCATC	2 cut(s)	189, 537
BpuEI	CTTGAG	2 cut(s)	176, 934
BsaHI	GRCGYC	1 cut(s)	660
BsaI	GGTCTC	1 cut(s)	288
BsaJI	CCNNGG	5 cut(s)	625, 684, 698, 818, 1059
BsaWI	WCCGGW	2 cut(s)	920, 1003
Bsc4I	CCNNNNNNNGG	1 cut(s)	140
Bse118I	RCCGGY	1 cut(s)	967
Bse1I	ACTGG	1 cut(s)	404
BseBI	CCWGG	3 cut(s)	135, 839, 1061
BseDI	CCNNGG	5 cut(s)	625, 684, 698, 818, 1059
BseGI	GGATG	3 cut(s)	10, 656, 1000
BseLI	CCNNNNNNNGG	1 cut(s)	140
BseMII	CTCAG	2 cut(s)	485, 826
BseNI	ACTGG	1 cut(s)	404
BseRI	GAGGAG	2 cut(s)	889, 1230
BseSI	GKGCMC	1 cut(s)	1060
BseXI	GCAGC	3 cut(s)	433, 855, 955
BseYI	CCCAGC	1 cut(s)	1013
BsgI	GTGCAG	1 cut(s)	1190
Bsh1236I	CGCG	2 cut(s)	1069, 1071
Bsh1285I	CGRYCG	2 cut(s)	747, 787
BshFI	GGCC	7 cut(s)	630, 967, 1058, 1064, 1074, 1197, 1293
BsiEI	CGRYCG	2 cut(s)	747, 787
BsiSI	CCGG	3 cut(s)	921, 968, 1004
BslFI	GGGAC	1 cut(s)	232
BslI	CCNNNNNNNGG	1 cut(s)	140
BsmAI	GTCTC	3 cut(s)	288, 667, 1261
BsmBI	CGTCTC	1 cut(s)	667
BsmFI	GGGAC	1 cut(s)	232
BsnI	GGCC	7 cut(s)	630, 967, 1058, 1064, 1074, 1197, 1293
Bso31I	GGTCTC	1 cut(s)	288
Bsp120I	GGGCCC	1 cut(s)	1056
Bsp1286I	GDGCHC	1 cut(s)	1060
Bsp1407I	TGTACA	1 cut(s)	75
Bsp143I	GATC	6 cut(s)	43, 275, 744, 772, 784, 890
BspANI	GGCC	7 cut(s)	630, 967, 1058, 1064, 1074, 1197, 1293
BspCNI	CTCAG	2 cut(s)	486, 825
BspFNI	CGCG	2 cut(s)	1069, 1071
BspLI	GGNNCC	3 cut(s)	892, 1057, 1058
BspMAI	CTGCAG	1 cut(s)	873
BspMI	ACCTGC	1 cut(s)	1032
BspPI	GGATC	3 cut(s)	780, 885, 898
BspTNI	GGTCTC	1 cut(s)	288
BsrFI	RCCGGY	1 cut(s)	967
BsrGI	TGTACA	1 cut(s)	75
BsrI	ACTGG	1 cut(s)	404
BssAI	RCCGGY	1 cut(s)	967
BssECI	CCNNGG	5 cut(s)	625, 684, 698, 818, 1059
BssMI	GATC	6 cut(s)	43, 275, 744, 772, 784, 890
BssNI	GRCGYC	1 cut(s)	660
BssT1I	CCWWGG	3 cut(s)	625, 684, 698
Bst2UI	CCWGG	3 cut(s)	135, 839, 1061
Bst4CI	ACNGT	2 cut(s)	195, 819
Bst6I	CTCTTC	2 cut(s)	1103, 1163
BstACI	GRCGYC	1 cut(s)	660
BstAPI	GCANNNNNTGC	1 cut(s)	208
BstAUI	TGTACA	1 cut(s)	75
BstC8I	GCNNGC	4 cut(s)	125, 1168, 1174, 1221
BstDEI	CTNAG	4 cut(s)	478, 494, 812, 1297
BstDSI	CCRYGG	1 cut(s)	818
BstF5I	GGATG	3 cut(s)	10, 656, 1000
BstFNI	CGCG	2 cut(s)	1069, 1071
BstHHI	GCGC	2 cut(s)	1071, 1172
BstKTI	GATC	6 cut(s)	46, 278, 747, 775, 787, 893
BstMAI	GTCTC	3 cut(s)	288, 667, 1261
BstMBI	GATC	6 cut(s)	43, 275, 744, 772, 784, 890
BstMCI	CGRYCG	2 cut(s)	747, 787
BstMWI	GCNNNNNNNGC	3 cut(s)	208, 452, 461
BstNI	CCWGG	3 cut(s)	135, 839, 1061
BstNSI	RCATGY	3 cut(s)	1170, 1219, 1279
BstSCI	CCNGG	3 cut(s)	133, 837, 1059
BstSFI	CTRYAG	2 cut(s)	372, 869
BstSLI	GKGCMC	1 cut(s)	1060
BstUI	CGCG	2 cut(s)	1069, 1071
BstV1I	GCAGC	3 cut(s)	433, 855, 955
BstX2I	RGATCY	2 cut(s)	772, 890
BstYI	RGATCY	2 cut(s)	772, 890
BsuI	GTATCC	1 cut(s)	411
BsuRI	GGCC	7 cut(s)	630, 967, 1058, 1064, 1074, 1197, 1293
BtgI	CCRYGG	1 cut(s)	818
BtsCI	GGATG	3 cut(s)	10, 656, 1000
BveI	ACCTGC	1 cut(s)	1032
Cac8I	GCNNGC	4 cut(s)	125, 1168, 1174, 1221
CaiI	CAGNNNCTG	1 cut(s)	537
CfoI	GCGC	2 cut(s)	1071, 1172
Cfr10I	RCCGGY	1 cut(s)	967
Cfr13I	GGNCC	6 cut(s)	534, 835, 918, 981, 1056, 1057
CseI	GACGC	2 cut(s)	452, 649
Csp6I	GTAC	2 cut(s)	76, 1279
CviAII	CATG	6 cut(s)	203, 279, 1167, 1216, 1276, 1304
CviQI	GTAC	2 cut(s)	76, 1279
DdeI	CTNAG	4 cut(s)	478, 494, 812, 1297
DpnI	GATC	6 cut(s)	45, 277, 746, 774, 786, 892
DpnII	GATC	6 cut(s)	43, 275, 744, 772, 784, 890
DraI	TTTAAA	1 cut(s)	147
DraIII	CACNNNGTG	1 cut(s)	304
DrdI	GACNNNNNNGTC	1 cut(s)	1253
DseDI	GACNNNNNNGTC	1 cut(s)	1253
EaeI	YGGCCR	3 cut(s)	1062, 1072, 1291
Eam1104I	CTCTTC	2 cut(s)	1103, 1163
EarI	CTCTTC	2 cut(s)	1103, 1163
Eco130I	CCWWGG	3 cut(s)	625, 684, 698
Eco147I	AGGCCT	1 cut(s)	1197
Eco24I	GRGCYC	1 cut(s)	1060
Eco31I	GGTCTC	1 cut(s)	288
Eco47I	GGWCC	4 cut(s)	534, 835, 918, 981
Eco57I	CTGAAG	3 cut(s)	309, 329, 533
EcoO109I	RGGNCCY	4 cut(s)	534, 981, 1056, 1057
EcoRII	CCWGG	3 cut(s)	133, 837, 1059
EcoT14I	CCWWGG	3 cut(s)	625, 684, 698
EcoT22I	ATGCAT	1 cut(s)	204
EcoT38I	GRGCYC	1 cut(s)	1060
ErhI	CCWWGG	3 cut(s)	625, 684, 698
Esp3I	CGTCTC	1 cut(s)	667
FaeI	CATG	6 cut(s)	206, 282, 1170, 1219, 1279, 1307
FaqI	GGGAC	1 cut(s)	232
FatI	CATG	6 cut(s)	202, 278, 1166, 1215, 1275, 1303
Fnu4HI	GCNGC	8 cut(s)	447, 714, 717, 741, 781, 869, 944, 1072
FokI	GGATG	3 cut(s)	17, 663, 987
FriOI	GRGCYC	1 cut(s)	1060
Fsp4HI	GCNGC	8 cut(s)	447, 714, 717, 741, 781, 869, 944, 1072
FspBI	CTAG	6 cut(s)	32, 113, 128, 260, 699, 978
GlaI	GCGC	2 cut(s)	1070, 1171
GluI	GCNGC	8 cut(s)	447, 714, 717, 741, 781, 869, 944, 1072
GsaI	CCCAGC	1 cut(s)	1017
HaeIII	GGCC	7 cut(s)	630, 967, 1058, 1064, 1074, 1197, 1293
HapII	CCGG	3 cut(s)	921, 968, 1004
HgaI	GACGC	2 cut(s)	452, 649
HhaI	GCGC	2 cut(s)	1071, 1172
Hin1I	GRCGYC	1 cut(s)	660
Hin1II	CATG	6 cut(s)	206, 282, 1170, 1219, 1279, 1307
Hin6I	GCGC	2 cut(s)	1069, 1170
HinP1I	GCGC	2 cut(s)	1069, 1170
HindIII	AAGCTT	2 cut(s)	515, 545
HinfI	GANTC	2 cut(s)	245, 885
HpaII	CCGG	3 cut(s)	921, 968, 1004
HphI	GGTGA	3 cut(s)	856, 979, 1339
Hpy166II	GTNNAC	2 cut(s)	266, 751
Hpy188I	TCNGA	7 cut(s)	15, 495, 552, 667, 677, 815, 890
Hpy8I	GTNNAC	2 cut(s)	266, 751
Hpy99I	CGWCG	2 cut(s)	243, 764
HpyAV	CCTTC	4 cut(s)	641, 738, 762, 994
HpyCH4III	ACNGT	2 cut(s)	195, 819
HpyCH4IV	ACGT	1 cut(s)	762
HpyF10VI	GCNNNNNNNGC	3 cut(s)	208, 452, 461
HpyF3I	CTNAG	4 cut(s)	478, 494, 812, 1297
HpySE526I	ACGT	1 cut(s)	762
Hsp92I	GRCGYC	1 cut(s)	660
Hsp92II	CATG	6 cut(s)	206, 282, 1170, 1219, 1279, 1307
HspAI	GCGC	2 cut(s)	1069, 1170
Kzo9I	GATC	6 cut(s)	43, 275, 744, 772, 784, 890
LmnI	GCTCC	1 cut(s)	677
Lsp1109I	GCAGC	3 cut(s)	433, 855, 955
LweI	GCATC	2 cut(s)	189, 537
MaeI	CTAG	6 cut(s)	32, 113, 128, 260, 699, 978
MaeII	ACGT	1 cut(s)	762
MaeIII	GTNAC	3 cut(s)	100, 361, 1345
MalI	GATC	6 cut(s)	45, 277, 746, 774, 786, 892
MboI	GATC	6 cut(s)	43, 275, 744, 772, 784, 890
MboII	GAAGA	7 cut(s)	322, 716, 1031, 1090, 1100, 1150, 1347
MflI	RGATCY	2 cut(s)	772, 890
MhlI	GDGCHC	1 cut(s)	1060
MlsI	TGGCCA	2 cut(s)	1064, 1293
MluCI	AATT	4 cut(s)	505, 559, 568, 1286
MluNI	TGGCCA	2 cut(s)	1064, 1293
MlyI	GAGTC	2 cut(s)	254, 894
MmeI	TCCRAC	4 cut(s)	868, 1161, 1213, 1284
Mox20I	TGGCCA	2 cut(s)	1064, 1293
Mph1103I	ATGCAT	1 cut(s)	204
MroXI	GAANNNNTTC	1 cut(s)	234
MscI	TGGCCA	2 cut(s)	1064, 1293
MseI	TTAA	5 cut(s)	146, 183, 426, 513, 558
MslI	CAYNNNNRTG	1 cut(s)	1274
Msp20I	TGGCCA	2 cut(s)	1064, 1293
MspA1I	CMGCKG	2 cut(s)	897, 946
MspI	CCGG	3 cut(s)	921, 968, 1004
MspR9I	CCNGG	3 cut(s)	135, 839, 1061
MvaI	CCWGG	3 cut(s)	135, 839, 1061
MvnI	CGCG	2 cut(s)	1069, 1071
MwoI	GCNNNNNNNGC	3 cut(s)	208, 452, 461
NdeII	GATC	6 cut(s)	43, 275, 744, 772, 784, 890
NlaIII	CATG	6 cut(s)	206, 282, 1170, 1219, 1279, 1307
NlaIV	GGNNCC	3 cut(s)	892, 1057, 1058
NmeAIII	GCCGAG	1 cut(s)	1023
NmuCI	GTSAC	2 cut(s)	100, 1345
NsiI	ATGCAT	1 cut(s)	204
NspI	RCATGY	3 cut(s)	1170, 1219, 1279
PaeI	GCATGC	1 cut(s)	1170
PceI	AGGCCT	1 cut(s)	1197
PciI	ACATGT	1 cut(s)	1275
PcsI	WCGNNNNNNNCGW	1 cut(s)	857
PdmI	GAANNNNTTC	1 cut(s)	234
PkrI	GCNGC	8 cut(s)	448, 715, 718, 742, 782, 870, 945, 1073
Ple19I	CGATCG	2 cut(s)	747, 787
PleI	GAGTC	2 cut(s)	253, 893
PpsI	GAGTC	2 cut(s)	253, 893
PpuMI	RGGWCCY	2 cut(s)	534, 981
PscI	ACATGT	1 cut(s)	1275
PshBI	ATTAAT	1 cut(s)	558
Psp5II	RGGWCCY	2 cut(s)	534, 981
Psp6I	CCWGG	3 cut(s)	133, 837, 1059
PspFI	CCCAGC	1 cut(s)	1013
PspGI	CCWGG	3 cut(s)	133, 837, 1059
PspN4I	GGNNCC	3 cut(s)	892, 1057, 1058
PspOMI	GGGCCC	1 cut(s)	1056
PspPI	GGNCC	6 cut(s)	534, 835, 918, 981, 1056, 1057
PspPPI	RGGWCCY	2 cut(s)	534, 981
PstI	CTGCAG	1 cut(s)	873
PstNI	CAGNNNCTG	1 cut(s)	537
PsuI	RGATCY	2 cut(s)	772, 890
PvuI	CGATCG	2 cut(s)	747, 787
PvuII	CAGCTG	1 cut(s)	946
RsaI	GTAC	2 cut(s)	77, 1280
RsaNI	GTAC	2 cut(s)	76, 1279
RseI	CAYNNNNRTG	1 cut(s)	1274
SaqAI	TTAA	5 cut(s)	146, 183, 426, 513, 558
SatI	GCNGC	8 cut(s)	447, 714, 717, 741, 781, 869, 944, 1072
Sau3AI	GATC	6 cut(s)	43, 275, 744, 772, 784, 890
Sau96I	GGNCC	6 cut(s)	534, 835, 918, 981, 1056, 1057
SchI	GAGTC	2 cut(s)	254, 894
ScrFI	CCNGG	3 cut(s)	135, 839, 1061
SduI	GDGCHC	1 cut(s)	1060
SfaNI	GCATC	2 cut(s)	189, 537
SfcI	CTRYAG	2 cut(s)	372, 869
SinI	GGWCC	4 cut(s)	534, 835, 918, 981
SmiMI	CAYNNNNRTG	1 cut(s)	1274
SmlI	CTYRAG	2 cut(s)	155, 913
SmoI	CTYRAG	2 cut(s)	155, 913
SphI	GCATGC	1 cut(s)	1170
Sse9I	AATT	4 cut(s)	505, 559, 568, 1286
SseBI	AGGCCT	1 cut(s)	1197
SspMI	CTAG	6 cut(s)	32, 113, 128, 260, 699, 978
StuI	AGGCCT	1 cut(s)	1197
StyD4I	CCNGG	3 cut(s)	133, 837, 1059
StyI	CCWWGG	3 cut(s)	625, 684, 698
TaaI	ACNGT	2 cut(s)	195, 819
TaiI	ACGT	1 cut(s)	765
TaqI	TCGA	4 cut(s)	197, 241, 706, 1320
TasI	AATT	4 cut(s)	505, 559, 568, 1286
TatI	WGTACW	1 cut(s)	75
TauI	GCSGC	5 cut(s)	716, 719, 743, 783, 1074
Tru1I	TTAA	5 cut(s)	146, 183, 426, 513, 558
Tru9I	TTAA	5 cut(s)	146, 183, 426, 513, 558
TseFI	GTSAC	2 cut(s)	100, 1345
TseI	GCWGC	3 cut(s)	446, 868, 943
Tsp45I	GTSAC	2 cut(s)	100, 1345
TspDTI	ATGAA	2 cut(s)	963, 1338
VpaK11BI	GGWCC	4 cut(s)	534, 835, 918, 981
VspI	ATTAAT	1 cut(s)	558
XapI	RAATTY	1 cut(s)	1286
XceI	RCATGY	3 cut(s)	1170, 1219, 1279
XmaJI	CCTAGG	1 cut(s)	698
XmnI	GAANNNNTTC	1 cut(s)	234
XspI	CTAG	6 cut(s)	32, 113, 128, 260, 699, 978
Zsp2I	ATGCAT	1 cut(s)	204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.