AT5G14180
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000628
Physical Location & Seq
Reverse (-)
4571294 .. 4574679
3386 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G14180.1

Sequence Viewer

Length: 1257 bp
ATGGCCGGTTCGGTTATGGTTCCGTCCGTTTCAATCGGTTTAGCCTTATCTGTCTTAATCTTCTTCGCTCTTTCCCTCAAGACCCTTGAAGCTCGTGGAACCTTCGGCAGGCTTGCCGGACAGCCACCGCAGAGGACTGCTGCCGGCGGCATATGCGCTTCTTCTGTTCACATATTTGGTTACAAGTGCGAAGAACATGATGTGGTGACTCAAGATGGGTACATATTGAATATGCAAAGGATACCGGAAGGACGAGCCGGAGCCGTCGCCGGAGATGGGGGAAAGAGACAACCTGTCCTAATACAACATGGAATTCTTGTCGATGGGATGTCATGGCTGTTGAATCCAGCGGATCAAAATCTGCCGTTGATTTTGGCGGATCAAGGATTCGATGTGTGGATGGGGAACACAAGAGGGACTAGATTCAGCAGAAGACACAAGTACCTTAACCCTTCTCAACGGGCTTTCTGGAACTGGACGTGGGACGAGCTTGTGAGTTACGATCTGCCTGCTATGTTTGACCATATCCATGGCCTAACAGGCCAAAAGATTCACTACCTCGGACACTCTTTGGGGACGTTAATAGGATTTGCTTCGTTCTCAGAAAAAGGGTTGGTGGATCAAGTGAGATCGGCGGCGATGTTGAGTCCCGTTGCTTATCTCAGCCACATGACCACCGTCATCGGCGATATCGCCGCAAAAACCTTCCTCGCCGAGGCCACCTCTATTCTTGGATGGCCAGAGTTTAACCCGAAAAGTGGATTAGTAGGGGATTTTATAAAGGCTATATGCCTTAAAGCGGGGATCGACTGTTATGATTTAGTCTCTGTTATCACTGGAAAGAATTGCTGCCTTAACGCATCAACCATTGATCTGTTCCTTGCCAACGAACCTCAATCTACTTCCACCAAGAACATGATCCACCTTGCTCAAACGGTAAGAGACAAGGAGTTGAGAAAATACAACTATGGAAGCAGTGATCGCAACATAAAACATTACGGTCAAGCGATACCACCGGCATACAACATATCGGCGATCCCACACGAGCTTCCGCTTTTTTTCAGCTACGGTGGTTTAGATAGCCTGGCTGATGTGAAAGACGTTGAGTTTCTCCTTGACCAGTTTAAGTATCACGACATCGATAAGATGAATGTGCAGTTTGTGAAAGACTATGCTCATGCTGATTTCATCATGGGTGTTACTGCCAAAGACGTTGTTTATAACCAAGTTGCTACCTTTTTCAAACGACAAGCTTGA

Protein Analysis

418

Amino Acids

46.05

Weight (kDa)

6.7

Isoelectric Point (pI)

36.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydro_lipase PF04083 56 - 115 1.1e-17 Partial alpha/beta-hydrolase lipase region
Abhydrolase_1 PF00561 98 - 249 2.3e-10 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000628)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14180 AT5G14180 AT5G14180 AT5G14180 AT5G14180
fragaria_vesca FvH4_6g41960 FvH4_6g41980 FvH4_6g41980 FvH4_6g41980 FvH4_6g41980 FvH4_6g41980 FvH4_6g41980 FvH4_6g41980 FvH4_6g41980 FvH4_6g53200
malus_domestica MD09G1013100.v1.1 MD09G1115500.v1.1 MD09G1115600.v1.1 MD09G1115800.v1.1 MD17G1013800.v1.1 MD17G1107400.v1.1
prunus_persica Prupe.3G208900_v2.0.a1 Prupe.3G208900_v2.0.a1 Prupe.3G304100_v2.0.a1
pyrus_communis pycom09g04000 pycom09g04020 pycom09g04040 pycom111g01090 pycom111g01110 pycom17g01090 pycom17g10010
rosa_chinensis RchiOBHm_Chr2g0157861 RchiOBHm_Chr2g0157881 RchiOBHm_Chr2g0175241 RchiOBHm_Chr2g0175251
rosa_laevigata RLG00000021032 RLG00000021033 RLG00000022314 RLG00000022315
rosa_multiflora Rmu_co8368271.1_g000001 Rmu_co8519319.1_g000001 Rmu_co8519319.1_g000002 Rmu_sc0002441.1_g000007 Rmu_sc0002441.1_g000008 Rmu_sc0010083.1_g000002 Rmu_sc0015795.1_g000001 Rmu_sc0015795.1_g000002
rosa_roxburghii Rroxscaffold_1G00036740 Rroxscaffold_2G00077450 Rroxscaffold_2G00077460 Rroxscaffold_2G00091880 Rroxscaffold_2G00091890 Rroxscaffold_2G00127210
rosa_rugosa Rorug02G0464200 Rorug02G0464200 Rorug02G0582000 Rorug02G0582100 Rorug02G0582100 Rorug02G0582100 Rorug02G0582200 Rorug02G0582200 Rorug02G0582200
rosa_samantha Rh2AG529400 Rh2AG529500 Rh2AG662400 Rh2AG662500 Rh2BG544000 Rh2BG544100 Rh2BG673600 Rh2BG673700 Rh2CG513700 Rh2CG513800 Rh2CG636800 Rh2DG552400
rosa_wichuraiana Rw2G043800 Rw2G043810 Rw2G054330 Rw2G054340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 779, 1221
AciI CCGC 8 cut(s) 128, 147, 350, 377, 635, 696, 800, 1052
AclWI GGATC 6 cut(s) 360, 387, 627, 812, 913, 1030
AcoI YGGCCR 2 cut(s) 3, 737
AcsI RAATTY 1 cut(s) 312
AfaI GTAC 2 cut(s) 221, 443
AfiI CCNNNNNNNGG 5 cut(s) 108, 276, 715, 758, 799
AgsI TTSAA 5 cut(s) 33, 89, 229, 343, 1243
AhdI GACNNNNNGTC 1 cut(s) 293
AjiI CACGTC 1 cut(s) 480
AjnI CCWGG 1 cut(s) 1083
AluBI AGCT 5 cut(s) 92, 490, 1048, 1065, 1253
AluI AGCT 5 cut(s) 92, 490, 1048, 1065, 1253
Alw26I GTCTC 3 cut(s) 280, 829, 936
AlwI GGATC 6 cut(s) 360, 387, 627, 812, 913, 1030
AoxI GGCC 5 cut(s) 3, 532, 541, 717, 737
ApeKI GCWGC 2 cut(s) 140, 849
ApoI RAATTY 1 cut(s) 312
AspLEI GCGC 1 cut(s) 158
AsuHPI GGTGA 1 cut(s) 217
BaeI ACNNNNGTAYC 2 cut(s) 425, 458
BalI TGGCCA 1 cut(s) 739
BauI CACGAG 2 cut(s) 93, 1043
BbsI GAAGAC 1 cut(s) 439
BbvI GCAGC 2 cut(s) 127, 836
BccI CCATC 5 cut(s) 209, 269, 317, 394, 729
BceAI ACGGC 2 cut(s) 248, 349
BcgI CGANNNNNNTGC 2 cut(s) 491, 525
BciT130I CCWGG 1 cut(s) 1085
BciVI GTATCC 1 cut(s) 234
BcoDI GTCTC 3 cut(s) 280, 829, 936
BfaI CTAG 1 cut(s) 420
BfuI GTATCC 1 cut(s) 234
BglI GCCNNNNNGGC 1 cut(s) 540
BisI GCNGC 5 cut(s) 141, 148, 636, 696, 850
BlsI GCNGC 5 cut(s) 142, 149, 637, 697, 851
Bme1390I CCNGG 1 cut(s) 1085
BmeRI GACNNNNNGTC 1 cut(s) 293
BmgBI CACGTC 1 cut(s) 480
BmiI GGNNCC 3 cut(s) 21, 100, 262
BmrFI CCNGG 1 cut(s) 1085
BmsI GCATC 1 cut(s) 869
BoxI GACNNNNGTC 1 cut(s) 677
BpiI GAAGAC 1 cut(s) 439
BplI GAGNNNNNCTC 2 cut(s) 707, 739
BpuEI CTTGAG 2 cut(s) 62, 195
Bsa29I ATCGAT 1 cut(s) 1140
BsaBI GATNNNNATC 1 cut(s) 357
BsaJI CCNNGG 3 cut(s) 529, 559, 714
BsaWI WCCGGW 1 cut(s) 244
Bsc4I CCNNNNNNNGG 5 cut(s) 108, 276, 715, 758, 799
Bse118I RCCGGY 3 cut(s) 5, 143, 1015
Bse1I ACTGG 3 cut(s) 479, 841, 1120
Bse8I GATNNNNATC 1 cut(s) 357
BseBI CCWGG 1 cut(s) 1085
BseCI ATCGAT 1 cut(s) 1140
BseDI CCNNGG 3 cut(s) 529, 559, 714
BseGI GGATG 3 cut(s) 333, 405, 740
BseJI GATNNNNATC 1 cut(s) 357
BseLI CCNNNNNNNGG 5 cut(s) 108, 276, 715, 758, 799
BseMII CTCAG 2 cut(s) 615, 676
BseNI ACTGG 3 cut(s) 479, 841, 1120
BseXI GCAGC 2 cut(s) 127, 836
BsgI GTGCAG 1 cut(s) 1175
BshFI GGCC 5 cut(s) 5, 534, 543, 719, 739
BshVI ATCGAT 1 cut(s) 1140
BsiSI CCGG 7 cut(s) 6, 117, 144, 245, 258, 270, 1016
BslFI GGGAC 4 cut(s) 430, 497, 589, 633
BslI CCNNNNNNNGG 5 cut(s) 108, 276, 715, 758, 799
BsmAI GTCTC 3 cut(s) 280, 829, 936
BsmFI GGGAC 4 cut(s) 430, 497, 589, 633
BsnI GGCC 5 cut(s) 5, 534, 543, 719, 739
Bsp19I CCATGG 1 cut(s) 529
BspACI CCGC 8 cut(s) 128, 147, 350, 377, 635, 696, 800, 1052
BspANI GGCC 5 cut(s) 5, 534, 543, 719, 739
BspCNI CTCAG 2 cut(s) 614, 675
BspDI ATCGAT 1 cut(s) 1140
BspLI GGNNCC 3 cut(s) 21, 100, 262
BspPI GGATC 6 cut(s) 360, 387, 627, 812, 913, 1030
BsrFI RCCGGY 3 cut(s) 5, 143, 1015
BsrI ACTGG 3 cut(s) 479, 841, 1120
BssAI RCCGGY 3 cut(s) 5, 143, 1015
BssECI CCNNGG 3 cut(s) 529, 559, 714
BssSI CACGAG 2 cut(s) 93, 1043
BssT1I CCWWGG 1 cut(s) 529
Bst2BI CACGAG 2 cut(s) 93, 1043
Bst2UI CCWGG 1 cut(s) 1085
Bst4CI ACNGT 5 cut(s) 679, 812, 937, 1001, 1070
BstC8I GCNNGC 4 cut(s) 110, 114, 145, 510
BstDEI CTNAG 2 cut(s) 601, 662
BstDSI CCRYGG 1 cut(s) 529
BstENI CCTNNNNNAGG 2 cut(s) 106, 713
BstF5I GGATG 3 cut(s) 333, 405, 740
BstHHI GCGC 1 cut(s) 158
BstMAI GTCTC 3 cut(s) 280, 829, 936
BstMWI GCNNNNNNNGC 3 cut(s) 153, 540, 981
BstNI CCWGG 1 cut(s) 1085
BstPAI GACNNNNGTC 1 cut(s) 677
BstSCI CCNGG 1 cut(s) 1083
BstV1I GCAGC 2 cut(s) 127, 836
BstV2I GAAGAC 1 cut(s) 439
BstXI CCANNNNNNTGG 1 cut(s) 530
Bsu15I ATCGAT 1 cut(s) 1140
BsuI GTATCC 1 cut(s) 234
BsuRI GGCC 5 cut(s) 5, 534, 543, 719, 739
BsuTUI ATCGAT 1 cut(s) 1140
BtgI CCRYGG 1 cut(s) 529
BtgZI GCGATG 1 cut(s) 653
BtrI CACGTC 1 cut(s) 480
BtsCI GGATG 3 cut(s) 333, 405, 740
BtsI GCAGTG 1 cut(s) 982
BtsIMutI CAGTG 2 cut(s) 834, 982
Cac8I GCNNGC 4 cut(s) 110, 114, 145, 510
CfoI GCGC 1 cut(s) 158
Cfr10I RCCGGY 3 cut(s) 5, 143, 1015
ClaI ATCGAT 1 cut(s) 1140
Csp6I GTAC 2 cut(s) 220, 442
CviAII CATG 8 cut(s) 197, 308, 333, 530, 670, 916, 1178, 1192
CviQI GTAC 2 cut(s) 220, 442
DdeI CTNAG 2 cut(s) 601, 662
DriI GACNNNNNGTC 1 cut(s) 293
EaeI YGGCCR 2 cut(s) 3, 737
Eam1105I GACNNNNNGTC 1 cut(s) 293
EciI GGCGGA 1 cut(s) 392
Eco130I CCWWGG 1 cut(s) 529
Eco32I GATATC 1 cut(s) 691
EcoNI CCTNNNNNAGG 2 cut(s) 106, 713
EcoRI GAATTC 1 cut(s) 312
EcoRII CCWGG 1 cut(s) 1083
EcoRV GATATC 1 cut(s) 691
EcoT14I CCWWGG 1 cut(s) 529
ErhI CCWWGG 1 cut(s) 529
FaeI CATG 8 cut(s) 200, 311, 336, 533, 673, 919, 1181, 1195
FaqI GGGAC 4 cut(s) 430, 497, 589, 633
FatI CATG 8 cut(s) 196, 307, 332, 529, 669, 915, 1177, 1191
FauI CCCGC 1 cut(s) 793
FauNDI CATATG 1 cut(s) 152
Fnu4HI GCNGC 5 cut(s) 141, 148, 636, 696, 850
FokI GGATG 3 cut(s) 340, 412, 747
Fsp4HI GCNGC 5 cut(s) 141, 148, 636, 696, 850
FspBI CTAG 1 cut(s) 420
GlaI GCGC 1 cut(s) 157
GluI GCNGC 5 cut(s) 141, 148, 636, 696, 850
HaeIII GGCC 5 cut(s) 5, 534, 543, 719, 739
HapII CCGG 7 cut(s) 6, 117, 144, 245, 258, 270, 1016
HhaI GCGC 1 cut(s) 158
Hin1II CATG 8 cut(s) 200, 311, 336, 533, 673, 919, 1181, 1195
Hin6I GCGC 1 cut(s) 156
HinP1I GCGC 1 cut(s) 156
HindIII AAGCTT 1 cut(s) 1251
HinfI GANTC 6 cut(s) 208, 343, 387, 423, 550, 646
HpaII CCGG 7 cut(s) 6, 117, 144, 245, 258, 270, 1016
HphI GGTGA 1 cut(s) 217
Hpy166II GTNNAC 1 cut(s) 169
Hpy188I TCNGA 2 cut(s) 563, 604
Hpy188III TCNNGA 4 cut(s) 79, 212, 469, 1133
Hpy8I GTNNAC 1 cut(s) 169
Hpy99I CGWCG 1 cut(s) 269
HpyAV CCTTC 4 cut(s) 112, 242, 462, 715
HpyCH4III ACNGT 5 cut(s) 679, 812, 937, 1001, 1070
HpyCH4IV ACGT 4 cut(s) 479, 578, 1101, 1212
HpyCH4V TGCA 2 cut(s) 235, 1156
HpyF10VI GCNNNNNNNGC 3 cut(s) 153, 540, 981
HpyF3I CTNAG 2 cut(s) 601, 662
HpySE526I ACGT 4 cut(s) 479, 578, 1101, 1212
Hsp92II CATG 8 cut(s) 200, 311, 336, 533, 673, 919, 1181, 1195
HspAI GCGC 1 cut(s) 156
KroI GCCGGC 1 cut(s) 143
KroNI GCCGGC 1 cut(s) 145
LmnI GCTCC 1 cut(s) 260
Lsp1109I GCAGC 2 cut(s) 127, 836
LweI GCATC 1 cut(s) 869
MaeI CTAG 1 cut(s) 420
MaeII ACGT 4 cut(s) 479, 578, 1101, 1212
MaeIII GTNAC 4 cut(s) 179, 205, 497, 1198
MboII GAAGA 5 cut(s) 52, 55, 153, 203, 444
MlsI TGGCCA 1 cut(s) 739
MluCI AATT 2 cut(s) 312, 844
MluNI TGGCCA 1 cut(s) 739
MlyI GAGTC 2 cut(s) 202, 655
MnlI CCTC 8 cut(s) 86, 126, 407, 569, 709, 719, 733, 903
Mox20I TGGCCA 1 cut(s) 739
MroNI GCCGGC 1 cut(s) 143
MscI TGGCCA 1 cut(s) 739
MseI TTAA 7 cut(s) 56, 447, 581, 747, 795, 855, 1125
MslI CAYNNNNRTG 1 cut(s) 528
Msp20I TGGCCA 1 cut(s) 739
MspA1I CMGCKG 1 cut(s) 350
MspI CCGG 7 cut(s) 6, 117, 144, 245, 258, 270, 1016
MspR9I CCNGG 1 cut(s) 1085
MvaI CCWGG 1 cut(s) 1085
MwoI GCNNNNNNNGC 3 cut(s) 153, 540, 981
NaeI GCCGGC 1 cut(s) 145
NcoI CCATGG 1 cut(s) 529
NdeI CATATG 1 cut(s) 152
NgoMIV GCCGGC 1 cut(s) 143
NlaIII CATG 8 cut(s) 200, 311, 336, 533, 673, 919, 1181, 1195
NlaIV GGNNCC 3 cut(s) 21, 100, 262
NmeAIII GCCGAG 1 cut(s) 739
NmuCI GTSAC 1 cut(s) 205
PdiI GCCGGC 1 cut(s) 145
PfeI GAWTC 4 cut(s) 343, 387, 423, 550
PkrI GCNGC 5 cut(s) 142, 149, 637, 697, 851
PleI GAGTC 2 cut(s) 202, 654
PpsI GAGTC 2 cut(s) 202, 654
PshAI GACNNNNGTC 1 cut(s) 677
PsiI TTATAA 2 cut(s) 779, 1221
Psp6I CCWGG 1 cut(s) 1083
PspGI CCWGG 1 cut(s) 1083
PspN4I GGNNCC 3 cut(s) 21, 100, 262
RsaI GTAC 2 cut(s) 221, 443
RsaNI GTAC 2 cut(s) 220, 442
RseI CAYNNNNRTG 1 cut(s) 528
SaqAI TTAA 7 cut(s) 56, 447, 581, 747, 795, 855, 1125
SatI GCNGC 5 cut(s) 141, 148, 636, 696, 850
SchI GAGTC 2 cut(s) 202, 655
ScrFI CCNGG 1 cut(s) 1085
SfaNI GCATC 1 cut(s) 869
SfiI GGCCNNNNNGGCC 1 cut(s) 540
SmiMI CAYNNNNRTG 1 cut(s) 528
SmlI CTYRAG 2 cut(s) 77, 210
SmoI CTYRAG 2 cut(s) 77, 210
Sse9I AATT 2 cut(s) 312, 844
SsiI CCGC 8 cut(s) 128, 147, 350, 377, 635, 696, 800, 1052
SspMI CTAG 1 cut(s) 420
StyD4I CCNGG 1 cut(s) 1083
StyI CCWWGG 1 cut(s) 529
TaaI ACNGT 5 cut(s) 679, 812, 937, 1001, 1070
TaiI ACGT 4 cut(s) 482, 581, 1104, 1215
TaqI TCGA 4 cut(s) 321, 390, 807, 1140
TasI AATT 2 cut(s) 312, 844
TauI GCSGC 3 cut(s) 150, 638, 698
TfiI GAWTC 4 cut(s) 343, 387, 423, 550
Tru1I TTAA 7 cut(s) 56, 447, 581, 747, 795, 855, 1125
Tru9I TTAA 7 cut(s) 56, 447, 581, 747, 795, 855, 1125
TscAI CASTG 2 cut(s) 841, 982
TseFI GTSAC 1 cut(s) 205
TseI GCWGC 2 cut(s) 140, 849
Tsp45I GTSAC 1 cut(s) 205
TspDTI ATGAA 2 cut(s) 1163, 1177
TspGWI ACGGA 2 cut(s) 12, 16
TspRI CASTG 2 cut(s) 841, 982
XagI CCTNNNNNAGG 2 cut(s) 106, 713
XapI RAATTY 1 cut(s) 312
XspI CTAG 1 cut(s) 420
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.