Rh2AG529400
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
75832613 .. 75835389
2777 bp
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UTR
Exon/CDS
Intron
Rh2AG529400.1

Sequence Viewer

Length: 348 bp
ATGGCAAACATTCTTACCTCTATTACTGCAGTTGTTCTATTCTGGGGATTGGCAGTTGGTACTAGAACAAAGCTATTCTCTTTCGAAGACAGCGTGGTTTCGGCAGTGGCTCCATCTGGTAGTGATGGTATCTGTGCATCAATGGTGCTATCACAAGGCTACCCTTGTGAAGAACATACAGGTTCATCAATTGTATTTATAATTGTAATTTCCTCCCTGATCCTAGTCGATAGATTGGGTTTCATCTCACCCTTGAGATATATTGTAAGGAGGAGTGACCGATTGGATTTCATCTCTACCATGAGATCTTATATATTTTTCAGGGAAGAGATATCCCTGCGTCAATGA

Protein Analysis

115

Amino Acids

12.74

Weight (kDa)

6.55

Isoelectric Point (pI)

45.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000628)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 200
AclWI GGATC 1 cut(s) 214
AfaI GTAC 1 cut(s) 61
AluBI AGCT 1 cut(s) 73
AluI AGCT 1 cut(s) 73
AlwI GGATC 1 cut(s) 214
AsuHPI GGTGA 1 cut(s) 240
AsuII TTCGAA 1 cut(s) 84
BbsI GAAGAC 1 cut(s) 93
BccI CCATC 2 cut(s) 119, 121
BfaI CTAG 2 cut(s) 63, 224
BfmI CTRYAG 1 cut(s) 27
BglII AGATCT 1 cut(s) 305
BmiI GGNNCC 1 cut(s) 111
BmsI GCATC 1 cut(s) 146
BpiI GAAGAC 1 cut(s) 93
Bpu14I TTCGAA 1 cut(s) 84
BpuEI CTTGAG 1 cut(s) 274
BseRI GAGGAG 1 cut(s) 286
Bsp119I TTCGAA 1 cut(s) 84
Bsp143I GATC 2 cut(s) 219, 305
BspLI GGNNCC 1 cut(s) 111
BspMAI CTGCAG 1 cut(s) 31
BspPI GGATC 1 cut(s) 214
BspT104I TTCGAA 1 cut(s) 84
BssMI GATC 2 cut(s) 219, 305
Bst6I CTCTTC 1 cut(s) 321
BstBI TTCGAA 1 cut(s) 84
BstKTI GATC 2 cut(s) 222, 308
BstMBI GATC 2 cut(s) 219, 305
BstSFI CTRYAG 1 cut(s) 27
BstV2I GAAGAC 1 cut(s) 93
BstX2I RGATCY 1 cut(s) 305
BstYI RGATCY 1 cut(s) 305
BtsI GCAGTG 1 cut(s) 111
BtsIMutI CAGTG 1 cut(s) 111
CseI GACGC 1 cut(s) 329
Csp6I GTAC 1 cut(s) 60
CviAII CATG 1 cut(s) 301
CviJI RGCY 3 cut(s) 73, 110, 159
CviKI_1 RGCY 3 cut(s) 73, 110, 159
CviQI GTAC 1 cut(s) 60
DpnI GATC 2 cut(s) 221, 307
DpnII GATC 2 cut(s) 219, 305
Eam1104I CTCTTC 1 cut(s) 321
EarI CTCTTC 1 cut(s) 321
Eco32I GATATC 1 cut(s) 333
EcoRV GATATC 1 cut(s) 333
FaeI CATG 1 cut(s) 304
FaiI YATR 6 cut(s) 177, 200, 261, 302, 312, 314
FatI CATG 1 cut(s) 300
FspBI CTAG 2 cut(s) 63, 224
HgaI GACGC 1 cut(s) 329
Hin1II CATG 1 cut(s) 304
HphI GGTGA 1 cut(s) 240
HpyCH4V TGCA 2 cut(s) 29, 137
Hsp92II CATG 1 cut(s) 304
Kzo9I GATC 2 cut(s) 219, 305
LmnI GCTCC 1 cut(s) 115
LpnPI CCDG 5 cut(s) 28, 102, 165, 230, 307
LweI GCATC 1 cut(s) 146
MaeI CTAG 2 cut(s) 63, 224
MaeIII GTNAC 1 cut(s) 275
MalI GATC 2 cut(s) 221, 307
MboI GATC 2 cut(s) 219, 305
MboII GAAGA 3 cut(s) 98, 182, 338
MfeI CAATTG 1 cut(s) 189
MflI RGATCY 1 cut(s) 305
MluCI AATT 3 cut(s) 189, 201, 207
MnlI CCTC 3 cut(s) 28, 223, 264
MunI CAATTG 1 cut(s) 189
NdeII GATC 2 cut(s) 219, 305
NlaIII CATG 1 cut(s) 304
NlaIV GGNNCC 1 cut(s) 111
NmuCI GTSAC 1 cut(s) 275
NspV TTCGAA 1 cut(s) 84
PcsI WCGNNNNNNNCGW 1 cut(s) 90
PsiI TTATAA 1 cut(s) 200
PspN4I GGNNCC 1 cut(s) 111
PstI CTGCAG 1 cut(s) 31
PsuI RGATCY 1 cut(s) 305
RsaI GTAC 1 cut(s) 61
RsaNI GTAC 1 cut(s) 60
Sau3AI GATC 2 cut(s) 219, 305
SetI ASST 3 cut(s) 20, 75, 184
SfaNI GCATC 1 cut(s) 146
SfcI CTRYAG 1 cut(s) 27
SfuI TTCGAA 1 cut(s) 84
SmlI CTYRAG 1 cut(s) 253
SmoI CTYRAG 1 cut(s) 253
Sse9I AATT 3 cut(s) 189, 201, 207
SspMI CTAG 2 cut(s) 63, 224
TaqI TCGA 2 cut(s) 84, 228
TaqII GACCGA 1 cut(s) 294
TasI AATT 3 cut(s) 189, 201, 207
TscAI CASTG 1 cut(s) 111
TseFI GTSAC 1 cut(s) 275
Tsp45I GTSAC 1 cut(s) 275
TspDTI ATGAA 3 cut(s) 174, 232, 280
TspRI CASTG 1 cut(s) 111
XspI CTAG 2 cut(s) 63, 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.