pycom17g10010
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
7733207 .. 7735313
2107 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g10010.1

Sequence Viewer

Length: 1230 bp
ATGAAGATGTTGGCTGATAAGATTTTAAGCTGTATTGTTGTAGTTATTCTTGTCTGTGAGTCAGTAGTTGGAACCAGAACAAAGTTGTTCTCAGCTAACAATGTGCAGGATGCTGCTTCTGCATTGGCTCCGTCTCTCGGTGATGACGGAATCTGTGCAACAATGGTGGCAACACAAGGCTATGCTTGTGAAGAACACACGGTGACAACACAAGATGGATATATTCTCAGTATGCAGAGAATTCCAGCAGGGAAGTCAGGGGAGGCGTCGGGGAATGGGGTACCGGTACTTCTGCAACACGGTCTTCTGATGGATGGGATAACATGGCTGCTGTTACCTCCAGGCCAATCTTTGGCATTCCTCTTAGCTGACAACGGGTATGAGGTGTGGCTTGGGAACACCCGCGGAACCAAGTACAGCCTCGGACACACATCACTCAGTCCTGATGATCGGGCTTATTGGGAATGGTCGTGGGATGAACTCGTTGCTTATGATCTCCCGGCTACTTTCCAGTATGTGCGCGATCAAACTGGACAGAAGATTCACTATGTTGGACATTCGCTGGTGAATTTCACAAACTCTGCAGCTTTCTTCTCTGCTGGAACATTGGTTGCTTTTGCTGCATTTTCCAAAGACATGCAACTGAAGAACTTGAGATCAGCCGCCCTACTTAGCCCGATTGCTTATCTTGGTCAGATGCCCTCACCCCTTGCAAGAACAGCTGCTGAAAATTATGTTGCTGAGGCTGCAGTCAAATTTCTGAAGGCTGTCTGCCAGGAACCGGGTGTTGACTGCACCCATTTATTGACAGCGTTCACCGGGAAGAATTGCTGCTTAAATTCTTCCATAGTAGATGTTTTTCTAGATCATGAGCCTCAGTCAACTTCAACTAAAAACTTGGTCCATATATCCCAGATGATAAGAGACGGAACAATTGCAAAGTTTGACTACAAGGACGGGAATATGCAGCACTATGGGCAGCCTACTCCTCCAGTGTACAACATGACAAACATTCCAGATGACCTTCCTCTCTTCCTCAGTTACGGAGGAGCAGATGCCCTGTCGGACGTCAAAGATGTGAAGCAGCTGATGAATAGCCTCGAAAATCATGACGGAGATAAGCTTGTGCTTCAGTATAGAGACGATTACGCTCATGCAGATTTTGTCATGGGTGAAACTGCTAAGCAAGATGTGTATGATCCTCTCATGGCTTTCTTTAGACTTCAATGA

Protein Analysis

410

Amino Acids

44.71

Weight (kDa)

5.0

Isoelectric Point (pI)

31.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydro_lipase PF04083 53 - 111 6.1e-21 Partial alpha/beta-hydrolase lipase region
Abhydrolase_1 PF00561 95 - 188 6e-06 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000628)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1071
Acc65I GGTACC 1 cut(s) 280
AccB1I GGYRCC 1 cut(s) 280
AccB7I CCANNNNNTGG 1 cut(s) 352
AccII CGCG 2 cut(s) 405, 522
AciI CCGC 3 cut(s) 403, 405, 663
AclWI GGATC 1 cut(s) 1193
AcsI RAATTY 4 cut(s) 240, 568, 755, 838
AcuI CTGAAG 3 cut(s) 665, 782, 1115
AcyI GRCGYC 2 cut(s) 266, 1068
AdeI CACNNNGTG 1 cut(s) 202
AfaI GTAC 4 cut(s) 282, 288, 416, 998
AfiI CCNNNNNNNGG 3 cut(s) 137, 352, 781
AgeI ACCGGT 1 cut(s) 283
AgsI TTSAA 2 cut(s) 888, 1226
AjnI CCWGG 2 cut(s) 340, 774
AluBI AGCT 7 cut(s) 30, 95, 368, 587, 722, 1087, 1123
AluI AGCT 7 cut(s) 30, 95, 368, 587, 722, 1087, 1123
Alw26I GTCTC 3 cut(s) 138, 918, 1134
AlwI GGATC 1 cut(s) 1193
AlwNI CAGNNNCTG 1 cut(s) 725
AoxI GGCC 1 cut(s) 343
ApoI RAATTY 4 cut(s) 240, 568, 755, 838
AsiGI ACCGGT 1 cut(s) 283
Asp718I GGTACC 1 cut(s) 280
AspLEI GCGC 1 cut(s) 522
AspS9I GGNCC 1 cut(s) 901
AsuC2I CCSGG 3 cut(s) 500, 783, 820
AsuHPI GGTGA 6 cut(s) 152, 214, 577, 696, 808, 1184
AvaII GGWCC 1 cut(s) 901
BanI GGYRCC 1 cut(s) 280
BarI GAAGNNNNNNTAC 2 cut(s) 273, 305
BbsI GAAGAC 1 cut(s) 296
BbvCI CCTCAGC 1 cut(s) 741
BccI CCATC 3 cut(s) 209, 304, 308
BciT130I CCWGG 2 cut(s) 342, 776
BcnI CCSGG 3 cut(s) 500, 783, 820
BcoDI GTCTC 3 cut(s) 138, 918, 1134
BfaI CTAG 1 cut(s) 863
BfmI CTRYAG 2 cut(s) 582, 747
BlpI GCTNAGC 1 cut(s) 1182
Bme1390I CCNGG 5 cut(s) 342, 500, 776, 783, 820
Bme18I GGWCC 1 cut(s) 901
BmgT120I GGNCC 1 cut(s) 901
BmiI GGNNCC 5 cut(s) 73, 129, 282, 409, 780
BmrFI CCNGG 5 cut(s) 342, 500, 776, 783, 820
BmsI GCATC 3 cut(s) 100, 687, 1045
BpiI GAAGAC 1 cut(s) 296
BpmI CTGGAG 2 cut(s) 324, 975
Bpu10I CCTNAGC 1 cut(s) 741
Bpu1102I GCTNAGC 1 cut(s) 1182
BpuEI CTTGAG 1 cut(s) 673
BpuMI CCSGG 3 cut(s) 500, 783, 820
BsaHI GRCGYC 2 cut(s) 266, 1068
BsaJI CCNNGG 2 cut(s) 403, 421
BsaWI WCCGGW 1 cut(s) 283
Bsc4I CCNNNNNNNGG 3 cut(s) 137, 352, 781
Bse118I RCCGGY 1 cut(s) 283
Bse1I ACTGG 3 cut(s) 511, 535, 992
BseBI CCWGG 2 cut(s) 342, 776
BseDI CCNNGG 2 cut(s) 403, 421
BseGI GGATG 3 cut(s) 115, 319, 481
BseLI CCNNNNNNNGG 3 cut(s) 137, 352, 781
BseMII CTCAG 6 cut(s) 105, 241, 451, 732, 890, 1051
BseNI ACTGG 3 cut(s) 511, 535, 992
BseRI GAGGAG 2 cut(s) 978, 1062
BsgI GTGCAG 2 cut(s) 125, 778
Bsh1236I CGCG 2 cut(s) 405, 522
BshFI GGCC 1 cut(s) 345
BshNI GGYRCC 1 cut(s) 280
BshTI ACCGGT 1 cut(s) 283
BsiSI CCGG 4 cut(s) 284, 500, 782, 819
BslI CCNNNNNNNGG 3 cut(s) 137, 352, 781
BsmAI GTCTC 3 cut(s) 138, 918, 1134
BsmBI CGTCTC 3 cut(s) 138, 918, 1134
BsmI GAATGC 1 cut(s) 356
BsnI GGCC 1 cut(s) 345
Bsp1407I TGTACA 1 cut(s) 996
Bsp143I GATC 6 cut(s) 448, 493, 523, 656, 865, 1198
Bsp1720I GCTNAGC 1 cut(s) 1182
BspACI CCGC 3 cut(s) 403, 405, 663
BspANI GGCC 1 cut(s) 345
BspCNI CTCAG 6 cut(s) 104, 240, 450, 733, 889, 1050
BspFNI CGCG 2 cut(s) 405, 522
BspHI TCATGA 2 cut(s) 868, 1108
BspLI GGNNCC 5 cut(s) 73, 129, 282, 409, 780
BspMAI CTGCAG 2 cut(s) 586, 751
BspPI GGATC 1 cut(s) 1193
BspT107I GGYRCC 1 cut(s) 280
BsrFI RCCGGY 1 cut(s) 283
BsrGI TGTACA 1 cut(s) 996
BsrI ACTGG 3 cut(s) 511, 535, 992
BssAI RCCGGY 1 cut(s) 283
BssECI CCNNGG 2 cut(s) 403, 421
BssMI GATC 6 cut(s) 448, 493, 523, 656, 865, 1198
BssNI GRCGYC 2 cut(s) 266, 1068
Bst2UI CCWGG 2 cut(s) 342, 776
Bst4CI ACNGT 2 cut(s) 202, 302
Bst6I CTCTTC 1 cut(s) 1037
BstACI GRCGYC 2 cut(s) 266, 1068
BstAUI TGTACA 1 cut(s) 996
BstDEI CTNAG 9 cut(s) 91, 227, 364, 437, 671, 741, 876, 1037, 1182
BstDSI CCRYGG 1 cut(s) 403
BstF5I GGATG 3 cut(s) 115, 319, 481
BstFNI CGCG 2 cut(s) 405, 522
BstHHI GCGC 1 cut(s) 522
BstKTI GATC 6 cut(s) 451, 496, 526, 659, 868, 1201
BstMAI GTCTC 3 cut(s) 138, 918, 1134
BstMBI GATC 6 cut(s) 448, 493, 523, 656, 865, 1198
BstMWI GCNNNNNNNGC 5 cut(s) 119, 620, 719, 746, 976
BstNI CCWGG 2 cut(s) 342, 776
BstNSI RCATGY 1 cut(s) 640
BstSCI CCNGG 5 cut(s) 340, 498, 774, 781, 818
BstSFI CTRYAG 2 cut(s) 582, 747
BstUI CGCG 2 cut(s) 405, 522
BstV2I GAAGAC 1 cut(s) 296
BsuRI GGCC 1 cut(s) 345
BtgI CCRYGG 1 cut(s) 403
BtsCI GGATG 3 cut(s) 115, 319, 481
BtsIMutI CAGTG 1 cut(s) 999
CaiI CAGNNNCTG 1 cut(s) 725
CciI TCATGA 2 cut(s) 868, 1108
CfoI GCGC 1 cut(s) 522
Cfr10I RCCGGY 1 cut(s) 283
Cfr13I GGNCC 1 cut(s) 901
Cfr42I CCGCGG 1 cut(s) 406
CseI GACGC 1 cut(s) 255
Csp6I GTAC 4 cut(s) 281, 287, 415, 997
CspAI ACCGGT 1 cut(s) 283
CspCI CAANNNNNGTGG 2 cut(s) 147, 182
CviAII CATG 8 cut(s) 324, 637, 869, 1003, 1109, 1154, 1168, 1207
CviQI GTAC 4 cut(s) 281, 287, 415, 997
DdeI CTNAG 9 cut(s) 91, 227, 364, 437, 671, 741, 876, 1037, 1182
DpnI GATC 6 cut(s) 450, 495, 525, 658, 867, 1200
DpnII GATC 6 cut(s) 448, 493, 523, 656, 865, 1198
DraIII CACNNNGTG 1 cut(s) 202
Eam1104I CTCTTC 1 cut(s) 1037
EarI CTCTTC 1 cut(s) 1037
Eco47I GGWCC 1 cut(s) 901
Eco57I CTGAAG 3 cut(s) 665, 782, 1115
EcoRI GAATTC 1 cut(s) 240
EcoRII CCWGG 2 cut(s) 340, 774
Esp3I CGTCTC 3 cut(s) 138, 918, 1134
FaeI CATG 8 cut(s) 327, 640, 872, 1006, 1112, 1157, 1171, 1210
FatI CATG 8 cut(s) 323, 636, 868, 1002, 1108, 1153, 1167, 1206
FauI CCCGC 1 cut(s) 410
FokI GGATG 3 cut(s) 122, 326, 488
FspBI CTAG 1 cut(s) 863
GlaI GCGC 1 cut(s) 521
GsuI CTGGAG 2 cut(s) 324, 975
HaeIII GGCC 1 cut(s) 345
HapII CCGG 4 cut(s) 284, 500, 782, 819
HgaI GACGC 1 cut(s) 255
HhaI GCGC 1 cut(s) 522
Hin1I GRCGYC 2 cut(s) 266, 1068
Hin1II CATG 8 cut(s) 327, 640, 872, 1006, 1112, 1157, 1171, 1210
Hin6I GCGC 1 cut(s) 520
HinP1I GCGC 1 cut(s) 520
HincII GTYRAC 2 cut(s) 790, 882
HindII GTYRAC 2 cut(s) 790, 882
HindIII AAGCTT 1 cut(s) 1121
HinfI GANTC 3 cut(s) 59, 150, 541
HpaII CCGG 4 cut(s) 284, 500, 782, 819
HphI GGTGA 6 cut(s) 152, 214, 577, 696, 808, 1184
Hpy166II GTNNAC 4 cut(s) 790, 816, 882, 997
Hpy188I TCNGA 5 cut(s) 309, 425, 696, 762, 1066
Hpy188III TCNNGA 5 cut(s) 443, 863, 869, 1016, 1109
Hpy8I GTNNAC 4 cut(s) 790, 816, 882, 997
Hpy99I CGWCG 1 cut(s) 271
HpyAV CCTTC 2 cut(s) 757, 1034
HpyCH4III ACNGT 2 cut(s) 202, 302
HpyCH4IV ACGT 1 cut(s) 1068
HpyF10VI GCNNNNNNNGC 5 cut(s) 119, 620, 719, 746, 976
HpyF3I CTNAG 9 cut(s) 91, 227, 364, 437, 671, 741, 876, 1037, 1182
HpySE526I ACGT 1 cut(s) 1068
Hsp92I GRCGYC 2 cut(s) 266, 1068
Hsp92II CATG 8 cut(s) 327, 640, 872, 1006, 1112, 1157, 1171, 1210
HspAI GCGC 1 cut(s) 520
KpnI GGTACC 1 cut(s) 284
KspI CCGCGG 1 cut(s) 406
Kzo9I GATC 6 cut(s) 448, 493, 523, 656, 865, 1198
LmnI GCTCC 2 cut(s) 133, 1049
LweI GCATC 3 cut(s) 100, 687, 1045
MaeI CTAG 1 cut(s) 863
MaeII ACGT 1 cut(s) 1068
MaeIII GTNAC 3 cut(s) 202, 333, 1040
MalI GATC 6 cut(s) 450, 495, 525, 658, 867, 1200
MboI GATC 6 cut(s) 448, 493, 523, 656, 865, 1198
MboII GAAGA 9 cut(s) 16, 203, 296, 550, 583, 658, 834, 835, 1024
MfeI CAATTG 1 cut(s) 933
MluCI AATT 7 cut(s) 240, 568, 730, 755, 826, 838, 933
MlyI GAGTC 1 cut(s) 68
MmeI TCCRAC 3 cut(s) 49, 532, 1044
MseI TTAA 2 cut(s) 26, 836
MspA1I CMGCKG 3 cut(s) 405, 722, 1087
MspI CCGG 4 cut(s) 284, 500, 782, 819
MspR9I CCNGG 5 cut(s) 342, 500, 776, 783, 820
MunI CAATTG 1 cut(s) 933
Mva1269I GAATGC 1 cut(s) 356
MvaI CCWGG 2 cut(s) 342, 776
MvnI CGCG 2 cut(s) 405, 522
MwoI GCNNNNNNNGC 5 cut(s) 119, 620, 719, 746, 976
NciI CCSGG 3 cut(s) 500, 783, 820
NdeII GATC 6 cut(s) 448, 493, 523, 656, 865, 1198
NlaIII CATG 8 cut(s) 327, 640, 872, 1006, 1112, 1157, 1171, 1210
NlaIV GGNNCC 5 cut(s) 73, 129, 282, 409, 780
NmuCI GTSAC 1 cut(s) 202
NspI RCATGY 1 cut(s) 640
PagI TCATGA 2 cut(s) 868, 1108
PctI GAATGC 1 cut(s) 356
PfeI GAWTC 2 cut(s) 150, 541
PflMI CCANNNNNTGG 1 cut(s) 352
PinAI ACCGGT 1 cut(s) 283
PleI GAGTC 1 cut(s) 67
PpsI GAGTC 1 cut(s) 67
Psp6I CCWGG 2 cut(s) 340, 774
PspGI CCWGG 2 cut(s) 340, 774
PspN4I GGNNCC 5 cut(s) 73, 129, 282, 409, 780
PspPI GGNCC 1 cut(s) 901
PstI CTGCAG 2 cut(s) 586, 751
PstNI CAGNNNCTG 1 cut(s) 725
PvuII CAGCTG 2 cut(s) 722, 1087
RsaI GTAC 4 cut(s) 282, 288, 416, 998
RsaNI GTAC 4 cut(s) 281, 287, 415, 997
SacII CCGCGG 1 cut(s) 406
SaqAI TTAA 2 cut(s) 26, 836
Sau3AI GATC 6 cut(s) 448, 493, 523, 656, 865, 1198
Sau96I GGNCC 1 cut(s) 901
SchI GAGTC 1 cut(s) 68
ScrFI CCNGG 5 cut(s) 342, 500, 776, 783, 820
SfaNI GCATC 3 cut(s) 100, 687, 1045
SfcI CTRYAG 2 cut(s) 582, 747
Sfr303I CCGCGG 1 cut(s) 406
SgrBI CCGCGG 1 cut(s) 406
SinI GGWCC 1 cut(s) 901
SmlI CTYRAG 1 cut(s) 652
SmoI CTYRAG 1 cut(s) 652
Sse9I AATT 7 cut(s) 240, 568, 730, 755, 826, 838, 933
SsiI CCGC 3 cut(s) 403, 405, 663
SspMI CTAG 1 cut(s) 863
StyD4I CCNGG 5 cut(s) 340, 498, 774, 781, 818
TaaI ACNGT 2 cut(s) 202, 302
TaiI ACGT 1 cut(s) 1071
TaqI TCGA 1 cut(s) 1101
TasI AATT 7 cut(s) 240, 568, 730, 755, 826, 838, 933
TatI WGTACW 2 cut(s) 414, 996
TauI GCSGC 1 cut(s) 665
TfiI GAWTC 2 cut(s) 150, 541
Tru1I TTAA 2 cut(s) 26, 836
Tru9I TTAA 2 cut(s) 26, 836
TscAI CASTG 1 cut(s) 999
TseFI GTSAC 1 cut(s) 202
Tsp45I GTSAC 1 cut(s) 202
TspDTI ATGAA 3 cut(s) 17, 492, 1106
TspGWI ACGGA 5 cut(s) 120, 162, 942, 1059, 1128
TspRI CASTG 1 cut(s) 999
Van91I CCANNNNNTGG 1 cut(s) 352
VpaK11BI GGWCC 1 cut(s) 901
XapI RAATTY 4 cut(s) 240, 568, 755, 838
XbaI TCTAGA 1 cut(s) 862
XceI RCATGY 1 cut(s) 640
XspI CTAG 1 cut(s) 863
ZraI GACGTC 1 cut(s) 1069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.