Rmu_sc0015795.1_g000001
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015795.1
Physical Location & Seq
Reverse (-)
10973 .. 14215
3243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015795.1_g000001.1.cds

Sequence Viewer

Length: 1194 bp
atggctctgcgcagtttagctttttgcctgctgatggttttggtttctgtcgttgcacttgcgcctggtgcggtggagggctcgagtcggaagcttttggctcaggcaaatgcggctgtggctgcacaggcgtacggtatatgcaacgccttggtgactgtgcatggttaccaatgccaagagataactgtgactaccgatgatggttacatactgagcgtgcagagaattggtggtggtggcaccgggaaaccaccggtgataattcagcatggtgttcttgtggatgcagcagtttggctgatgaactctccggataaaaatctgccgttgattctagctgatagtggatttgatgtgtggatggctaacaccagagggaccagatttagccgacgtcatacctccatggaccccagcgatccgaaattttggaattggtcttgggatgaactggtggctcatgacctaccagctgtttttcattacgtgcatggccaaacaaaacagaagattaactacgtcggtcattccctggggactttgttagcattggcttcgctttcagaagggaagctagtggatcagctgaaatcagtagctttgctaactcccattgcttacctgactcacatgagtacaccaatctgtgcggttggggccagactctttgctggcgagatcataacagcatttcgttttgcagagttcgatccaaaaggagagcccgtggctgaattcttagatcatctatgtgccactccaggagttccatgttacgacatattctcactactcaccggcaaaaattgttgtctcaatgcttccactgttgatctcttcttggatcatcagcctcagtcaacatcaaccaagaacctggtgcacctgtctcaagttgtacgaaatggcattttgacaaaatacgaccacgggagatcgtacactaattatatgcactatggctcattttcgctccgcattacgatctttctaaaattcccaaccacctgcccatgttcatcacctacggcggccaagatgcgctctccgatgaactcgacgtgttgcatttacttgatcattttaagtctcacgacgcgggaaagcttgtggttgatttcatccccgagtatgcccatttcgattttgtcgcggggatcaatgccaaggaccttgtgtataataaagtga

Protein Analysis

397

Amino Acids

43.27

Weight (kDa)

8.52

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000628)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1019
AatII GACGTC 1 cut(s) 400
Acc16I TGCGCA 1 cut(s) 11
Acc36I ACCTGC 1 cut(s) 1019
AccB1I GGYRCC 1 cut(s) 242
AccII CGCG 2 cut(s) 1102, 1156
AccIII TCCGGA 1 cut(s) 313
AciI CCGC 7 cut(s) 71, 113, 653, 979, 1034, 1102, 1156
AclWI GGATC 5 cut(s) 416, 591, 707, 855, 1168
AcoI YGGCCR 2 cut(s) 496, 1035
AcsI RAATTY 3 cut(s) 428, 737, 998
AcyI GRCGYC 1 cut(s) 397
AfaI GTAC 4 cut(s) 134, 640, 903, 944
AfiI CCNNNNNNNGG 1 cut(s) 34
AflIII ACRYGT 1 cut(s) 1064
AgeI ACCGGT 1 cut(s) 256
AjiI CACGTC 1 cut(s) 1065
AjnI CCWGG 4 cut(s) 64, 534, 763, 879
AluBI AGCT 8 cut(s) 20, 94, 341, 476, 577, 589, 602, 1110
AluI AGCT 8 cut(s) 20, 94, 341, 476, 577, 589, 602, 1110
Alw21I GWGCWC 1 cut(s) 888
Alw26I GTCTC 3 cut(s) 821, 897, 1097
Alw44I GTGCAC 1 cut(s) 884
AlwI GGATC 5 cut(s) 416, 591, 707, 855, 1168
Ama87I CYCGRG 2 cut(s) 82, 1129
Aor13HI TCCGGA 1 cut(s) 313
AoxI GGCC 3 cut(s) 496, 660, 1035
ApaLI GTGCAC 1 cut(s) 884
ApeKI GCWGC 2 cut(s) 122, 290
ApoI RAATTY 3 cut(s) 428, 737, 998
AsiGI ACCGGT 1 cut(s) 256
AspLEI GCGC 3 cut(s) 12, 64, 1047
AspS9I GGNCC 4 cut(s) 381, 412, 660, 1173
AsuC2I CCSGG 1 cut(s) 247
AsuHPI GGTGA 4 cut(s) 166, 271, 790, 1017
AvaI CYCGRG 2 cut(s) 82, 1129
AvaII GGWCC 3 cut(s) 381, 412, 1173
BaeGI GKGCMC 1 cut(s) 888
BalI TGGCCA 1 cut(s) 498
BanI GGYRCC 1 cut(s) 242
BanII GRGCYC 2 cut(s) 83, 729
BarI GAAGNNNNNNTAC 2 cut(s) 503, 535
Bbv12I GWGCWC 1 cut(s) 888
BbvI GCAGC 2 cut(s) 109, 302
BccI CCATC 3 cut(s) 28, 197, 358
BceAI ACGGC 2 cut(s) 313, 1047
BcgI CGANNNNNNTGC 2 cut(s) 540, 574
BciT130I CCWGG 4 cut(s) 66, 536, 765, 881
BclI TGATCA 1 cut(s) 1080
BcnI CCSGG 1 cut(s) 247
BcoDI GTCTC 3 cut(s) 821, 897, 1097
BfaI CTAG 2 cut(s) 338, 578
BfuAI ACCTGC 1 cut(s) 1019
BisI GCNGC 4 cut(s) 114, 123, 291, 1035
BlsI GCNGC 4 cut(s) 115, 124, 292, 1036
Bme1390I CCNGG 5 cut(s) 66, 247, 536, 765, 881
Bme18I GGWCC 3 cut(s) 381, 412, 1173
BmeT110I CYCGRG 2 cut(s) 82, 1129
BmgBI CACGTC 1 cut(s) 1065
BmgT120I GGNCC 4 cut(s) 381, 412, 660, 1173
BmiI GGNNCC 4 cut(s) 244, 382, 414, 661
BmrFI CCNGG 5 cut(s) 66, 247, 536, 765, 881
BmsI GCATC 2 cut(s) 277, 1032
BpmI CTGGAG 1 cut(s) 747
Bpu10I CCTNAGC 1 cut(s) 102
BpuEI CTTGAG 1 cut(s) 879
BpuMI CCSGG 1 cut(s) 247
BsaAI YACGTR 1 cut(s) 490
BsaBI GATNNNNATC 1 cut(s) 321
BsaHI GRCGYC 1 cut(s) 397
BsaJI CCNNGG 7 cut(s) 150, 408, 534, 535, 729, 931, 1169
BsaWI WCCGGW 2 cut(s) 256, 313
BsaXI ACNNNNNCTCC 2 cut(s) 714, 744
Bsc4I CCNNNNNNNGG 1 cut(s) 34
Bse118I RCCGGY 2 cut(s) 256, 800
Bse1I ACTGG 1 cut(s) 459
Bse3DI GCAATG 1 cut(s) 615
Bse8I GATNNNNATC 1 cut(s) 321
BseAI TCCGGA 1 cut(s) 313
BseBI CCWGG 4 cut(s) 66, 536, 765, 881
BseDI CCNNGG 7 cut(s) 150, 408, 534, 535, 729, 931, 1169
BseGI GGATG 4 cut(s) 292, 369, 454, 1124
BseJI GATNNNNATC 1 cut(s) 321
BseLI CCNNNNNNNGG 1 cut(s) 34
BseMI GCAATG 1 cut(s) 615
BseMII CTCAG 3 cut(s) 116, 206, 872
BseNI ACTGG 1 cut(s) 459
BseSI GKGCMC 1 cut(s) 888
BseXI GCAGC 2 cut(s) 109, 302
BseYI CCCAGC 1 cut(s) 416
BsgI GTGCAG 2 cut(s) 108, 242
Bsh1236I CGCG 2 cut(s) 1102, 1156
BshFI GGCC 3 cut(s) 498, 662, 1037
BshNI GGYRCC 1 cut(s) 242
BshTI ACCGGT 1 cut(s) 256
BsiHKAI GWGCWC 1 cut(s) 888
BsiHKCI CYCGRG 2 cut(s) 82, 1129
BsiSI CCGG 4 cut(s) 246, 257, 314, 801
BsiWI CGTACG 1 cut(s) 132
BslFI GGGAC 2 cut(s) 394, 553
BslI CCNNNNNNNGG 1 cut(s) 34
BsmAI GTCTC 3 cut(s) 821, 897, 1097
BsmFI GGGAC 2 cut(s) 394, 553
BsnI GGCC 3 cut(s) 498, 662, 1037
BsoBI CYCGRG 2 cut(s) 82, 1129
Bsp1286I GDGCHC 3 cut(s) 83, 729, 888
Bsp13I TCCGGA 1 cut(s) 313
Bsp19I CCATGG 1 cut(s) 408
BspACI CCGC 7 cut(s) 71, 113, 653, 979, 1034, 1102, 1156
BspANI GGCC 3 cut(s) 498, 662, 1037
BspCNI CTCAG 3 cut(s) 115, 207, 871
BspEI TCCGGA 1 cut(s) 313
BspFNI CGCG 2 cut(s) 1102, 1156
BspHI TCATGA 1 cut(s) 463
BspLI GGNNCC 4 cut(s) 244, 382, 414, 661
BspMI ACCTGC 1 cut(s) 1019
BspPI GGATC 5 cut(s) 416, 591, 707, 855, 1168
BspT107I GGYRCC 1 cut(s) 242
BsrDI GCAATG 1 cut(s) 615
BsrFI RCCGGY 2 cut(s) 256, 800
BsrI ACTGG 1 cut(s) 459
BssAI RCCGGY 2 cut(s) 256, 800
BssECI CCNNGG 7 cut(s) 150, 408, 534, 535, 729, 931, 1169
BssNI GRCGYC 1 cut(s) 397
BssT1I CCWWGG 3 cut(s) 150, 408, 1169
Bst2UI CCWGG 4 cut(s) 66, 536, 765, 881
Bst4CI ACNGT 4 cut(s) 137, 160, 190, 832
Bst6I CTCTTC 1 cut(s) 845
BstACI GRCGYC 1 cut(s) 397
BstBAI YACGTR 1 cut(s) 490
BstC8I GCNNGC 3 cut(s) 29, 221, 676
BstDEI CTNAG 4 cut(s) 102, 215, 742, 858
BstDSI CCRYGG 3 cut(s) 408, 729, 931
BstEII GGTNACC 1 cut(s) 167
BstF5I GGATG 4 cut(s) 292, 369, 454, 1124
BstFNI CGCG 2 cut(s) 1102, 1156
BstHHI GCGC 3 cut(s) 12, 64, 1047
BstMAI GTCTC 3 cut(s) 821, 897, 1097
BstMWI GCNNNNNNNGC 6 cut(s) 68, 113, 119, 122, 128, 659
BstNI CCWGG 4 cut(s) 66, 536, 765, 881
BstPI GGTNACC 1 cut(s) 167
BstSCI CCNGG 5 cut(s) 64, 245, 534, 763, 879
BstSLI GKGCMC 1 cut(s) 888
BstUI CGCG 2 cut(s) 1102, 1156
BstV1I GCAGC 2 cut(s) 109, 302
BstXI CCANNNNNNTGG 1 cut(s) 880
BsuRI GGCC 3 cut(s) 498, 662, 1037
BtgI CCRYGG 3 cut(s) 408, 729, 931
BtrI CACGTC 1 cut(s) 1065
BtsCI GGATG 4 cut(s) 292, 369, 454, 1124
BtsIMutI CAGTG 1 cut(s) 828
BveI ACCTGC 1 cut(s) 1019
Cac8I GCNNGC 3 cut(s) 29, 221, 676
CciI TCATGA 1 cut(s) 463
CfoI GCGC 3 cut(s) 12, 64, 1047
Cfr10I RCCGGY 2 cut(s) 256, 800
Cfr13I GGNCC 4 cut(s) 381, 412, 660, 1173
CseI GACGC 1 cut(s) 1108
CsiI ACCWGGT 1 cut(s) 879
Csp6I GTAC 4 cut(s) 133, 639, 902, 943
CspAI ACCGGT 1 cut(s) 256
CviAII CATG 8 cut(s) 164, 272, 409, 464, 494, 634, 774, 1017
CviQI GTAC 4 cut(s) 133, 639, 902, 943
DdeI CTNAG 4 cut(s) 102, 215, 742, 858
EaeI YGGCCR 2 cut(s) 496, 1035
Eam1104I CTCTTC 1 cut(s) 845
EarI CTCTTC 1 cut(s) 845
Eco130I CCWWGG 3 cut(s) 150, 408, 1169
Eco24I GRGCYC 2 cut(s) 83, 729
Eco47I GGWCC 3 cut(s) 381, 412, 1173
Eco88I CYCGRG 2 cut(s) 82, 1129
Eco91I GGTNACC 1 cut(s) 167
EcoO109I RGGNCCY 1 cut(s) 1173
EcoO65I GGTNACC 1 cut(s) 167
EcoRI GAATTC 1 cut(s) 737
EcoRII CCWGG 4 cut(s) 64, 534, 763, 879
EcoT14I CCWWGG 3 cut(s) 150, 408, 1169
EcoT38I GRGCYC 2 cut(s) 83, 729
ErhI CCWWGG 3 cut(s) 150, 408, 1169
FaeI CATG 8 cut(s) 167, 275, 412, 467, 497, 637, 777, 1020
FaqI GGGAC 2 cut(s) 394, 553
FatI CATG 8 cut(s) 163, 271, 408, 463, 493, 633, 773, 1016
FauI CCCGC 2 cut(s) 1095, 1149
FbaI TGATCA 1 cut(s) 1080
Fnu4HI GCNGC 4 cut(s) 114, 123, 291, 1035
FokI GGATG 4 cut(s) 299, 376, 461, 1111
FriOI GRGCYC 2 cut(s) 83, 729
Fsp4HI GCNGC 4 cut(s) 114, 123, 291, 1035
FspBI CTAG 2 cut(s) 338, 578
FspI TGCGCA 1 cut(s) 11
GlaI GCGC 3 cut(s) 11, 63, 1046
GluI GCNGC 4 cut(s) 114, 123, 291, 1035
GsaI CCCAGC 1 cut(s) 420
GsuI CTGGAG 1 cut(s) 747
HaeIII GGCC 3 cut(s) 498, 662, 1037
HapII CCGG 4 cut(s) 246, 257, 314, 801
HgaI GACGC 1 cut(s) 1108
HhaI GCGC 3 cut(s) 12, 64, 1047
Hin1I GRCGYC 1 cut(s) 397
Hin1II CATG 8 cut(s) 167, 275, 412, 467, 497, 637, 777, 1020
Hin6I GCGC 3 cut(s) 10, 62, 1045
HinP1I GCGC 3 cut(s) 10, 62, 1045
HincII GTYRAC 1 cut(s) 864
HindII GTYRAC 1 cut(s) 864
HindIII AAGCTT 2 cut(s) 92, 1108
HinfI GANTC 4 cut(s) 85, 334, 628, 666
HpaII CCGG 4 cut(s) 246, 257, 314, 801
HphI GGTGA 4 cut(s) 166, 271, 790, 1017
Hpy166II GTNNAC 4 cut(s) 641, 864, 886, 945
Hpy188I TCNGA 4 cut(s) 90, 426, 568, 1053
Hpy188III TCNNGA 3 cut(s) 314, 464, 1096
Hpy8I GTNNAC 4 cut(s) 641, 864, 886, 945
Hpy99I CGWCG 4 cut(s) 399, 527, 1066, 1102
HpyAV CCTTC 1 cut(s) 563
HpyCH4III ACNGT 4 cut(s) 137, 160, 190, 832
HpyCH4IV ACGT 4 cut(s) 397, 489, 522, 1064
HpyF10VI GCNNNNNNNGC 6 cut(s) 68, 113, 119, 122, 128, 659
HpyF3I CTNAG 4 cut(s) 102, 215, 742, 858
HpySE526I ACGT 4 cut(s) 397, 489, 522, 1064
Hsp92I GRCGYC 1 cut(s) 397
Hsp92II CATG 8 cut(s) 167, 275, 412, 467, 497, 637, 777, 1020
HspAI GCGC 3 cut(s) 10, 62, 1045
Kpn2I TCCGGA 1 cut(s) 313
Ksp22I TGATCA 1 cut(s) 1080
LmnI GCTCC 1 cut(s) 981
Lsp1109I GCAGC 2 cut(s) 109, 302
LweI GCATC 2 cut(s) 277, 1032
MabI ACCWGGT 1 cut(s) 879
MaeI CTAG 2 cut(s) 338, 578
MaeII ACGT 4 cut(s) 397, 489, 522, 1064
MaeIII GTNAC 5 cut(s) 154, 167, 190, 206, 776
MboII GAAGA 2 cut(s) 523, 832
MhlI GDGCHC 3 cut(s) 83, 729, 888
MlsI TGGCCA 1 cut(s) 498
MluCI AATT 8 cut(s) 228, 264, 428, 436, 737, 808, 949, 998
MluNI TGGCCA 1 cut(s) 498
MlyI GAGTC 3 cut(s) 94, 622, 660
MmeI TCCRAC 1 cut(s) 68
MnlI CCTC 4 cut(s) 70, 371, 415, 867
Mox20I TGGCCA 1 cut(s) 498
MroI TCCGGA 1 cut(s) 313
MscI TGGCCA 1 cut(s) 498
MseI TTAA 2 cut(s) 516, 1088
MslI CAYNNNNRTG 1 cut(s) 753
Msp20I TGGCCA 1 cut(s) 498
MspA1I CMGCKG 2 cut(s) 476, 589
MspI CCGG 4 cut(s) 246, 257, 314, 801
MspR9I CCNGG 5 cut(s) 66, 247, 536, 765, 881
MvaI CCWGG 4 cut(s) 66, 536, 765, 881
MvnI CGCG 2 cut(s) 1102, 1156
MwoI GCNNNNNNNGC 6 cut(s) 68, 113, 119, 122, 128, 659
NciI CCSGG 1 cut(s) 247
NcoI CCATGG 1 cut(s) 408
NlaIII CATG 8 cut(s) 167, 275, 412, 467, 497, 637, 777, 1020
NlaIV GGNNCC 4 cut(s) 244, 382, 414, 661
NmuCI GTSAC 2 cut(s) 154, 190
NsbI TGCGCA 1 cut(s) 11
PaeR7I CTCGAG 1 cut(s) 82
PagI TCATGA 1 cut(s) 463
PaqCI CACCTGC 1 cut(s) 1019
PasI CCCWGGG 1 cut(s) 535
PfeI GAWTC 1 cut(s) 334
Pfl23II CGTACG 1 cut(s) 132
PfoI TCCNGGA 1 cut(s) 763
PinAI ACCGGT 1 cut(s) 256
PkrI GCNGC 4 cut(s) 115, 124, 292, 1036
PleI GAGTC 3 cut(s) 93, 622, 660
PpsI GAGTC 3 cut(s) 93, 622, 660
Ppu21I YACGTR 1 cut(s) 490
PpuMI RGGWCCY 1 cut(s) 1173
Psp5II RGGWCCY 1 cut(s) 1173
Psp6I CCWGG 4 cut(s) 64, 534, 763, 879
PspEI GGTNACC 1 cut(s) 167
PspFI CCCAGC 1 cut(s) 416
PspGI CCWGG 4 cut(s) 64, 534, 763, 879
PspLI CGTACG 1 cut(s) 132
PspN4I GGNNCC 4 cut(s) 244, 382, 414, 661
PspPI GGNCC 4 cut(s) 381, 412, 660, 1173
PspPPI RGGWCCY 1 cut(s) 1173
PspXI VCTCGAGB 1 cut(s) 82
PvuII CAGCTG 2 cut(s) 476, 589
RsaI GTAC 4 cut(s) 134, 640, 903, 944
RsaNI GTAC 4 cut(s) 133, 639, 902, 943
RseI CAYNNNNRTG 1 cut(s) 753
SaqAI TTAA 2 cut(s) 516, 1088
SatI GCNGC 4 cut(s) 114, 123, 291, 1035
Sau96I GGNCC 4 cut(s) 381, 412, 660, 1173
SchI GAGTC 3 cut(s) 94, 622, 660
ScrFI CCNGG 5 cut(s) 66, 247, 536, 765, 881
SduI GDGCHC 3 cut(s) 83, 729, 888
SexAI ACCWGGT 1 cut(s) 879
SfaNI GCATC 2 cut(s) 277, 1032
Sfr274I CTCGAG 1 cut(s) 82
SgrAI CRCCGGYG 1 cut(s) 256
SinI GGWCC 3 cut(s) 381, 412, 1173
SlaI CTCGAG 1 cut(s) 82
SmiMI CAYNNNNRTG 1 cut(s) 753
SmlI CTYRAG 2 cut(s) 82, 894
SmoI CTYRAG 2 cut(s) 82, 894
Sse9I AATT 8 cut(s) 228, 264, 428, 436, 737, 808, 949, 998
SsiI CCGC 7 cut(s) 71, 113, 653, 979, 1034, 1102, 1156
SspMI CTAG 2 cut(s) 338, 578
StyD4I CCNGG 5 cut(s) 64, 245, 534, 763, 879
StyI CCWWGG 3 cut(s) 150, 408, 1169
TaaI ACNGT 4 cut(s) 137, 160, 190, 832
TaiI ACGT 4 cut(s) 400, 492, 525, 1067
TaqI TCGA 4 cut(s) 83, 711, 1061, 1145
TaqII GACCGA 1 cut(s) 515
TasI AATT 8 cut(s) 228, 264, 428, 436, 737, 808, 949, 998
TatI WGTACW 1 cut(s) 638
TauI GCSGC 2 cut(s) 116, 1037
TfiI GAWTC 1 cut(s) 334
Tru1I TTAA 2 cut(s) 516, 1088
Tru9I TTAA 2 cut(s) 516, 1088
TscAI CASTG 1 cut(s) 835
TseFI GTSAC 2 cut(s) 154, 190
TseI GCWGC 2 cut(s) 122, 290
Tsp45I GTSAC 2 cut(s) 154, 190
TspDTI ATGAA 6 cut(s) 320, 465, 473, 1011, 1070, 1113
TspRI CASTG 1 cut(s) 835
VneI GTGCAC 1 cut(s) 884
VpaK11BI GGWCC 3 cut(s) 381, 412, 1173
XapI RAATTY 3 cut(s) 428, 737, 998
XhoI CTCGAG 1 cut(s) 82
XspI CTAG 2 cut(s) 338, 578
ZraI GACGTC 1 cut(s) 398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.