Prupe.3G208900_v2.0.a1
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000628
Physical Location & Seq
Reverse (-)
21472004 .. 21474616
2613 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G208900.1

Sequence Viewer

Length: 1248 bp
ATGATGAAGATGATGGCTAATAACATTTTAGCCTCTAGTATTCTAGTCATTCTTCTGTTCTGTGAGTCAGCAGTTGGAGCAAGAACAAAGCTACTCTCAGCCAATAATGGTCAGGATGCTACTTCTGCATTGGCTCCATCTGCCAATGATGGCATCTGTGCAACAATGGTGGAAACTCATGGCTATGCTTGTGAAGAACACACAGTAACAACACAAGATGGCTATATACTCAGTATGCAGAGAATTCCAGTTAGAAAGTCAGGGGAGGCATCCGGAAACCGGATACCAGTACTTCTACAACATGGGCTGCTGATGGATGGGATAACATGGCTGCTACTACCTCCTGACCAATCTTTGGCATTCCTCTTGGCTGATAATGGGTATGAGGTCTGGCTTGGCAACACTCGCGGCACCAAATATAGCCTCGGCCATACATCACTCAGTCCCGATGATCCGGCTTATTGGGAATGGTCATGGGATGAATTGGTCGCTTATGATCTTCCAGCTACATTCCAGTATGTGCATGATCAAACAGGACAGAAAATTCACTATGTTGGACATTCACTGGGAACTTTGGTAGCTCTAGGTGCTTTTTGCAAAGACCAGCAACTGAATAGATTGAGATCAGCTGTCTTACTTAGCCCGATTGCTTATGTTGGTCAGATACTTTCACCCCTTGCAAGAACTGCTGCTGAAAACTTTATTGCTGAGGGATTATACAAGGCAGACATCAGAGAGTTCAATCCGAAAGGGAAGGCACTAGTCGAAGTTCTTAAGGCTGTCTGCAGTAAACCAGGTGTTGACTGCACTCAGTTGTTGACCGCTTTCACAGGCAAGAATTGCTGCTTAAACTCTTCCATAGTAGATGTGTTTCTGGACCATGAGCCTCAGTCAACCTCAACAAAAAACATGGTCCATATATCTCAGATGATAAGAGATGGAACAGTTGCAATGTTTGACTATGATAACAAGAATGAGAACATGCAACACTATGGGCAGCCCAATCCTCCAGTGTACAGCATGACAAGCATCCCAAATGACCTTCCTCTCTTCCTCAGTTATGGAGGGGCAGATGCTCTTTCTGATGTCAAAGATGTGAAGCTGTTGCTGGCCAGCCTCAAAGATCATGATGGAGATAAGCTTGTGGTTCAGTACAGAGATGATTATGCTCATGCAGATTTTGTCATGGGTCAAACTGCTAAGCAAGATGTGTATGATCCTCTCATGGCCTTCTTAAAACTTCAATGA

Protein Analysis

416

Amino Acids

45.58

Weight (kDa)

5.24

Isoelectric Point (pI)

29.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000628)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14180 AT5G14180 AT5G14180 AT5G14180 AT5G14180
fragaria_vesca FvH4_6g41960 FvH4_6g41980 FvH4_6g41980 FvH4_6g41980 FvH4_6g41980 FvH4_6g41980 FvH4_6g41980 FvH4_6g41980 FvH4_6g41980 FvH4_6g53200
malus_domestica MD09G1013100.v1.1 MD09G1115500.v1.1 MD09G1115600.v1.1 MD09G1115800.v1.1 MD17G1013800.v1.1 MD17G1107400.v1.1
prunus_persica Prupe.3G208900_v2.0.a1 Prupe.3G208900_v2.0.a1 Prupe.3G304100_v2.0.a1
pyrus_communis pycom09g04000 pycom09g04020 pycom09g04040 pycom111g01090 pycom111g01110 pycom17g01090 pycom17g10010
rosa_chinensis RchiOBHm_Chr2g0157861 RchiOBHm_Chr2g0157881 RchiOBHm_Chr2g0175241 RchiOBHm_Chr2g0175251
rosa_laevigata RLG00000021032 RLG00000021033 RLG00000022314 RLG00000022315
rosa_multiflora Rmu_co8368271.1_g000001 Rmu_co8519319.1_g000001 Rmu_co8519319.1_g000002 Rmu_sc0002441.1_g000007 Rmu_sc0002441.1_g000008 Rmu_sc0010083.1_g000002 Rmu_sc0015795.1_g000001 Rmu_sc0015795.1_g000002
rosa_roxburghii Rroxscaffold_1G00036740 Rroxscaffold_2G00077450 Rroxscaffold_2G00077460 Rroxscaffold_2G00091880 Rroxscaffold_2G00091890 Rroxscaffold_2G00127210
rosa_rugosa Rorug02G0464200 Rorug02G0464200 Rorug02G0582000 Rorug02G0582100 Rorug02G0582100 Rorug02G0582100 Rorug02G0582200 Rorug02G0582200 Rorug02G0582200
rosa_samantha Rh2AG529400 Rh2AG529500 Rh2AG662400 Rh2AG662500 Rh2BG544000 Rh2BG544100 Rh2BG673600 Rh2BG673700 Rh2CG513700 Rh2CG513800 Rh2CG636800 Rh2DG552400
rosa_wichuraiana Rw2G043800 Rw2G043810 Rw2G054330 Rw2G054340

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 410
AccB7I CCANNNNNTGG 1 cut(s) 355
AccII CGCG 1 cut(s) 408
AccIII TCCGGA 1 cut(s) 272
AciI CCGC 2 cut(s) 408, 822
AclWI GGATC 2 cut(s) 446, 1211
AcoI YGGCCR 2 cut(s) 427, 1110
AcsI RAATTY 2 cut(s) 243, 543
AfaI GTAC 3 cut(s) 291, 1016, 1154
AfiI CCNNNNNNNGG 2 cut(s) 279, 355
AflII CTTAAG 1 cut(s) 773
AgsI TTSAA 2 cut(s) 742, 1244
AhlI ACTAGT 1 cut(s) 760
AjnI CCWGG 1 cut(s) 793
AluBI AGCT 6 cut(s) 91, 506, 581, 629, 1102, 1141
AluI AGCT 6 cut(s) 91, 506, 581, 629, 1102, 1141
AlwI GGATC 2 cut(s) 446, 1211
AlwNI CAGNNNCTG 1 cut(s) 610
Aor13HI TCCGGA 1 cut(s) 272
AoxI GGCC 3 cut(s) 427, 1110, 1227
ApeKI GCWGC 5 cut(s) 307, 331, 689, 843, 997
ApoI RAATTY 2 cut(s) 243, 543
AspS9I GGNCC 2 cut(s) 877, 913
AsuHPI GGTGA 1 cut(s) 663
AvaII GGWCC 2 cut(s) 877, 913
BalI TGGCCA 1 cut(s) 1112
BanI GGYRCC 1 cut(s) 410
BbvCI CCTCAGC 1 cut(s) 708
BbvI GCAGC 5 cut(s) 294, 318, 676, 830, 1009
BccI CCATC 8 cut(s) 7, 143, 145, 212, 307, 311, 932, 1124
BciT130I CCWGG 1 cut(s) 795
BciVI GTATCC 1 cut(s) 276
BclI TGATCA 1 cut(s) 526
BcuI ACTAGT 1 cut(s) 760
BfaI CTAG 4 cut(s) 36, 44, 584, 761
BfmI CTRYAG 1 cut(s) 784
BfrI CTTAAG 1 cut(s) 773
BfuI GTATCC 1 cut(s) 276
BisI GCNGC 6 cut(s) 308, 332, 409, 690, 844, 998
BlpI GCTNAGC 1 cut(s) 1200
BlsI GCNGC 6 cut(s) 309, 333, 410, 691, 845, 999
BmcAI AGTACT 1 cut(s) 291
Bme1390I CCNGG 1 cut(s) 795
Bme18I GGWCC 2 cut(s) 877, 913
BmgT120I GGNCC 2 cut(s) 877, 913
BmiI GGNNCC 2 cut(s) 135, 412
BmrFI CCNGG 1 cut(s) 795
BmrI ACTGGG 1 cut(s) 575
BmsI GCATC 5 cut(s) 106, 162, 278, 1038, 1063
BmuI ACTGGG 1 cut(s) 575
BpmI CTGGAG 1 cut(s) 993
Bpu10I CCTNAGC 1 cut(s) 708
Bpu1102I GCTNAGC 1 cut(s) 1200
BsaBI GATNNNNATC 1 cut(s) 622
BsaJI CCNNGG 1 cut(s) 424
BsaWI WCCGGW 2 cut(s) 272, 279
Bsc4I CCNNNNNNNGG 2 cut(s) 279, 355
Bse1I ACTGG 5 cut(s) 248, 287, 514, 570, 1010
Bse3DI GCAATG 1 cut(s) 957
Bse8I GATNNNNATC 1 cut(s) 622
BseAI TCCGGA 1 cut(s) 272
BseBI CCWGG 1 cut(s) 795
BseDI CCNNGG 1 cut(s) 424
BseGI GGATG 5 cut(s) 121, 269, 322, 484, 1029
BseJI GATNNNNATC 1 cut(s) 622
BseLI CCNNNNNNNGG 2 cut(s) 279, 355
BseMI GCAATG 1 cut(s) 957
BseMII CTCAG 8 cut(s) 111, 244, 454, 699, 824, 902, 938, 1069
BseNI ACTGG 5 cut(s) 248, 287, 514, 570, 1010
BseXI GCAGC 5 cut(s) 294, 318, 676, 830, 1009
BsgI GTGCAG 1 cut(s) 790
Bsh1236I CGCG 1 cut(s) 408
BshFI GGCC 3 cut(s) 429, 1112, 1229
BshNI GGYRCC 1 cut(s) 410
BsiSI CCGG 3 cut(s) 273, 280, 455
BslFI GGGAC 1 cut(s) 429
BslI CCNNNNNNNGG 2 cut(s) 279, 355
BsmFI GGGAC 1 cut(s) 429
BsmI GAATGC 1 cut(s) 359
BsnI GGCC 3 cut(s) 429, 1112, 1229
Bsp13I TCCGGA 1 cut(s) 272
Bsp1407I TGTACA 1 cut(s) 1014
Bsp143I GATC 6 cut(s) 451, 496, 526, 623, 1123, 1216
Bsp1720I GCTNAGC 1 cut(s) 1200
BspACI CCGC 2 cut(s) 408, 822
BspANI GGCC 3 cut(s) 429, 1112, 1229
BspCNI CTCAG 8 cut(s) 110, 243, 453, 700, 823, 901, 937, 1068
BspEI TCCGGA 1 cut(s) 272
BspFNI CGCG 1 cut(s) 408
BspHI TCATGA 1 cut(s) 1126
BspLI GGNNCC 2 cut(s) 135, 412
BspMAI CTGCAG 1 cut(s) 788
BspPI GGATC 2 cut(s) 446, 1211
BspT107I GGYRCC 1 cut(s) 410
BspTI CTTAAG 1 cut(s) 773
BsrDI GCAATG 1 cut(s) 957
BsrGI TGTACA 1 cut(s) 1014
BsrI ACTGG 5 cut(s) 248, 287, 514, 570, 1010
BssECI CCNNGG 1 cut(s) 424
BssMI GATC 6 cut(s) 451, 496, 526, 623, 1123, 1216
Bst2UI CCWGG 1 cut(s) 795
Bst4CI ACNGT 2 cut(s) 205, 946
Bst6I CTCTTC 2 cut(s) 859, 1055
BstAFI CTTAAG 1 cut(s) 773
BstAPI GCANNNNNTGC 2 cut(s) 686, 840
BstAUI TGTACA 1 cut(s) 1014
BstC8I GCNNGC 2 cut(s) 1110, 1114
BstF5I GGATG 5 cut(s) 121, 269, 322, 484, 1029
BstFNI CGCG 1 cut(s) 408
BstKTI GATC 6 cut(s) 454, 499, 529, 626, 1126, 1219
BstMBI GATC 6 cut(s) 451, 496, 526, 623, 1123, 1216
BstMWI GCNNNNNNNGC 8 cut(s) 77, 125, 140, 405, 587, 686, 840, 1026
BstNI CCWGG 1 cut(s) 795
BstNSI RCATGY 1 cut(s) 985
BstSCI CCNGG 1 cut(s) 793
BstSFI CTRYAG 1 cut(s) 784
BstUI CGCG 1 cut(s) 408
BstV1I GCAGC 5 cut(s) 294, 318, 676, 830, 1009
BsuI GTATCC 1 cut(s) 276
BsuRI GGCC 3 cut(s) 429, 1112, 1229
BtsCI GGATG 5 cut(s) 121, 269, 322, 484, 1029
BtsIMutI CAGTG 2 cut(s) 563, 1017
Cac8I GCNNGC 2 cut(s) 1110, 1114
CaiI CAGNNNCTG 1 cut(s) 610
CciI TCATGA 1 cut(s) 1126
Cfr13I GGNCC 2 cut(s) 877, 913
CsiI ACCWGGT 1 cut(s) 793
Csp6I GTAC 3 cut(s) 290, 1015, 1153
CspCI CAANNNNNGTGG 2 cut(s) 150, 185
CviQI GTAC 3 cut(s) 290, 1015, 1153
DpnI GATC 6 cut(s) 453, 498, 528, 625, 1125, 1218
DpnII GATC 6 cut(s) 451, 496, 526, 623, 1123, 1216
EaeI YGGCCR 2 cut(s) 427, 1110
Eam1104I CTCTTC 2 cut(s) 859, 1055
EarI CTCTTC 2 cut(s) 859, 1055
Eco47I GGWCC 2 cut(s) 877, 913
EcoRI GAATTC 1 cut(s) 243
EcoRII CCWGG 1 cut(s) 793
FaqI GGGAC 1 cut(s) 429
FbaI TGATCA 1 cut(s) 526
Fnu4HI GCNGC 6 cut(s) 308, 332, 409, 690, 844, 998
FokI GGATG 5 cut(s) 128, 256, 329, 491, 1016
Fsp4HI GCNGC 6 cut(s) 308, 332, 409, 690, 844, 998
FspBI CTAG 4 cut(s) 36, 44, 584, 761
GluI GCNGC 6 cut(s) 308, 332, 409, 690, 844, 998
GsuI CTGGAG 1 cut(s) 993
HaeIII GGCC 3 cut(s) 429, 1112, 1229
HapII CCGG 3 cut(s) 273, 280, 455
HincII GTYRAC 3 cut(s) 802, 819, 894
HindII GTYRAC 3 cut(s) 802, 819, 894
HindIII AAGCTT 1 cut(s) 1139
HinfI GANTC 1 cut(s) 65
HpaII CCGG 3 cut(s) 273, 280, 455
HphI GGTGA 1 cut(s) 663
Hpy166II GTNNAC 5 cut(s) 791, 802, 819, 894, 1015
Hpy188I TCNGA 5 cut(s) 663, 734, 747, 927, 1084
Hpy188III TCNNGA 6 cut(s) 113, 273, 344, 446, 875, 1127
Hpy8I GTNNAC 5 cut(s) 791, 802, 819, 894, 1015
HpyAV CCTTC 3 cut(s) 748, 1052, 1240
HpyCH4III ACNGT 2 cut(s) 205, 946
HpyF10VI GCNNNNNNNGC 8 cut(s) 77, 125, 140, 405, 587, 686, 840, 1026
Kpn2I TCCGGA 1 cut(s) 272
Ksp22I TGATCA 1 cut(s) 526
Kzo9I GATC 6 cut(s) 451, 496, 526, 623, 1123, 1216
LmnI GCTCC 2 cut(s) 77, 139
Lsp1109I GCAGC 5 cut(s) 294, 318, 676, 830, 1009
LweI GCATC 5 cut(s) 106, 162, 278, 1038, 1063
MabI ACCWGGT 1 cut(s) 793
MaeI CTAG 4 cut(s) 36, 44, 584, 761
MaeIII GTNAC 1 cut(s) 205
MalI GATC 6 cut(s) 453, 498, 528, 625, 1125, 1218
MboI GATC 6 cut(s) 451, 496, 526, 623, 1123, 1216
MboII GAAGA 6 cut(s) 19, 44, 206, 491, 846, 1042
MlsI TGGCCA 1 cut(s) 1112
MluCI AATT 4 cut(s) 243, 482, 543, 838
MluNI TGGCCA 1 cut(s) 1112
MlyI GAGTC 1 cut(s) 74
MmeI TCCRAC 2 cut(s) 55, 535
Mox20I TGGCCA 1 cut(s) 1112
MroI TCCGGA 1 cut(s) 272
MscI TGGCCA 1 cut(s) 1112
MseI TTAA 3 cut(s) 774, 848, 1235
MslI CAYNNNNRTG 1 cut(s) 183
Msp20I TGGCCA 1 cut(s) 1112
MspA1I CMGCKG 1 cut(s) 629
MspCI CTTAAG 1 cut(s) 773
MspI CCGG 3 cut(s) 273, 280, 455
MspR9I CCNGG 1 cut(s) 795
Mva1269I GAATGC 1 cut(s) 359
MvaI CCWGG 1 cut(s) 795
MvnI CGCG 1 cut(s) 408
MwoI GCNNNNNNNGC 8 cut(s) 77, 125, 140, 405, 587, 686, 840, 1026
NdeII GATC 6 cut(s) 451, 496, 526, 623, 1123, 1216
NlaIV GGNNCC 2 cut(s) 135, 412
NmeAIII GCCGAG 1 cut(s) 405
NspI RCATGY 1 cut(s) 985
PagI TCATGA 1 cut(s) 1126
PctI GAATGC 1 cut(s) 359
PflMI CCANNNNNTGG 1 cut(s) 355
PkrI GCNGC 6 cut(s) 309, 333, 410, 691, 845, 999
PleI GAGTC 1 cut(s) 73
PpsI GAGTC 1 cut(s) 73
Psp6I CCWGG 1 cut(s) 793
PspGI CCWGG 1 cut(s) 793
PspN4I GGNNCC 2 cut(s) 135, 412
PspPI GGNCC 2 cut(s) 877, 913
PstI CTGCAG 1 cut(s) 788
PstNI CAGNNNCTG 1 cut(s) 610
PvuII CAGCTG 1 cut(s) 629
RsaI GTAC 3 cut(s) 291, 1016, 1154
RsaNI GTAC 3 cut(s) 290, 1015, 1153
RseI CAYNNNNRTG 1 cut(s) 183
SaqAI TTAA 3 cut(s) 774, 848, 1235
SatI GCNGC 6 cut(s) 308, 332, 409, 690, 844, 998
Sau3AI GATC 6 cut(s) 451, 496, 526, 623, 1123, 1216
Sau96I GGNCC 2 cut(s) 877, 913
ScaI AGTACT 1 cut(s) 291
SchI GAGTC 1 cut(s) 74
ScrFI CCNGG 1 cut(s) 795
SexAI ACCWGGT 1 cut(s) 793
SfaNI GCATC 5 cut(s) 106, 162, 278, 1038, 1063
SfcI CTRYAG 1 cut(s) 784
SinI GGWCC 2 cut(s) 877, 913
SmiMI CAYNNNNRTG 1 cut(s) 183
SmlI CTYRAG 1 cut(s) 773
SmoI CTYRAG 1 cut(s) 773
SpeI ACTAGT 1 cut(s) 760
Sse9I AATT 4 cut(s) 243, 482, 543, 838
SsiI CCGC 2 cut(s) 408, 822
SspMI CTAG 4 cut(s) 36, 44, 584, 761
StyD4I CCNGG 1 cut(s) 793
TaaI ACNGT 2 cut(s) 205, 946
TaqI TCGA 1 cut(s) 765
TasI AATT 4 cut(s) 243, 482, 543, 838
TatI WGTACW 3 cut(s) 289, 1014, 1152
TauI GCSGC 1 cut(s) 411
Tru1I TTAA 3 cut(s) 774, 848, 1235
Tru9I TTAA 3 cut(s) 774, 848, 1235
TscAI CASTG 2 cut(s) 570, 1017
TseI GCWGC 5 cut(s) 307, 331, 689, 843, 997
TspDTI ATGAA 2 cut(s) 20, 495
TspRI CASTG 2 cut(s) 570, 1017
Van91I CCANNNNNTGG 1 cut(s) 355
Vha464I CTTAAG 1 cut(s) 773
VpaK11BI GGWCC 2 cut(s) 877, 913
XapI RAATTY 2 cut(s) 243, 543
XceI RCATGY 1 cut(s) 985
XspI CTAG 4 cut(s) 36, 44, 584, 761
ZrmI AGTACT 1 cut(s) 291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.