MD09G1013100.v1.1
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
816292 .. 820826
4535 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1013100.v1.1.491

Sequence Viewer

Length: 1248 bp
ATGGCAGCAGTCTGGGCGAGCTTCTGCCTCCTAGTATCGCTTGCAGCACTTTCACCTCATCGAGCGCACGGCTCCACTTGGGGTTCATTATTCGACCGCAAACACGGTGCTGCGGCCGCCCCGACAGTTGGTATATGCGCGTCGTCGGTGGTTGTGTACGGCTACCCATGCCAGGAGTTTGATGTGACAACCCAAGATGGTTATGTATTGAGTGTGCAAAGGATTCCGGAAGGTCGCGGCAAAGGCAGCAGTGGCGGCAGCGGCGGCGGGATTAAGAAGCCACCGGTCTTAATCCAGCATGGTGTCCTTGTGGATGGAGTCACCTGGCTCTTGAATTCTCCGGACAGAAATCTGCCATTGATTCTGGCAGACAACGGATTTGATGTGTGGATTGCCAACACCAGAGGGACCAGGTTCAGCAGGCGACATACTTCCATGGATCCCCGCGATCCGAAATTTTGGAATTGGTCTTGGGATGAACTGGTGGCTTTTGATCTACCAGCAGTGTTTGATTTCGTGTATGGCAAGGCTGGACAGAAGATCAATTATGTTGGCCATTCCCTGGGAACTTTATTTGTATTGGCATCGTTATCAGAAGGGAAACTGGTGGACCAGATGAAATCAGCAGCCTTGCTAAGCCCCATTGCTTATTTGAGCCACATGAACACTGCACTTGGTGTGGCTGCTGCCAAAGCCTTTGTTGGTGAGATCACCACGCTTTTCGGACTTGCGGAGTTCAACCCGAAAGGGGACCCAGCGGCTCAATTTCTGCAAGCTCTATGTGCTTATCCAGGGGTTTACTGCTATGACTTATTACAAGCTGTTACTGGCAAAAACTGCTGTCTCAATTCTTCCACCATTGATCTCTTCTTGGAGAATGAGCCTCAGTCAACATCCACCAAGAACATGGTGCACTTGGCTCAAATTGTACGAGATGGGAAGTTGGCAAAATACAACTACGGCAGACCAGACTTAAACTTGATGCATTATGGCAGATTTAACCCTCCAGTTTACAACCTCTCCAACATTCCCCATGACCTTCCTCTGTTCCTCAGCTATGGCGGCCAAGACGCGCTCTCCGATTTTCGCGATGTGGCACGCTTACTGGATAGTCTAAAACTTCACGATGTGGGCAAGCTCACTGTTCAGTACATAGAGAATTATGCACATGCAGATTTCATCATGGGGTTGAATGCTAAGGACATTGTGTATAATCAAGTGACTGCATTTTTCAAGCAGCAACACTGA

Protein Analysis

416

Amino Acids

45.39

Weight (kDa)

6.88

Isoelectric Point (pI)

23.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydro_lipase PF04083 52 - 112 4.2e-16 Partial alpha/beta-hydrolase lipase region
Abhydrolase_1 PF00561 94 - 372 6.3e-10 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000628)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 562
AccII CGCG 5 cut(s) 140, 237, 447, 1073, 1089
AccIII TCCGGA 2 cut(s) 226, 340
AclWI GGATC 3 cut(s) 434, 443, 447
AcoI YGGCCR 3 cut(s) 114, 553, 1063
AcsI RAATTY 2 cut(s) 334, 455
AdeI CACNNNGTG 2 cut(s) 677, 1129
AfaI GTAC 3 cut(s) 158, 930, 1151
AfiI CCNNNNNNNGG 4 cut(s) 128, 172, 562, 748
AgeI ACCGGT 1 cut(s) 283
AgsI TTSAA 4 cut(s) 334, 739, 1192, 1234
AjnI CCWGG 5 cut(s) 171, 323, 410, 561, 790
AluBI AGCT 5 cut(s) 21, 776, 821, 1056, 1138
AluI AGCT 5 cut(s) 21, 776, 821, 1056, 1138
Alw21I GWGCWC 1 cut(s) 915
Alw26I GTCTC 1 cut(s) 848
Alw44I GTGCAC 1 cut(s) 911
AlwI GGATC 3 cut(s) 434, 443, 447
Aor13HI TCCGGA 2 cut(s) 226, 340
AoxI GGCC 3 cut(s) 114, 553, 1063
ApaLI GTGCAC 1 cut(s) 911
ApeKI GCWGC 9 cut(s) 5, 44, 110, 246, 258, 626, 683, 686, 1237
ApoI RAATTY 2 cut(s) 334, 455
ArsI GACNNNNNNTTYG 2 cut(s) 362, 394
AsiGI ACCGGT 1 cut(s) 283
AspLEI GCGC 3 cut(s) 67, 140, 1075
AspS9I GGNCC 3 cut(s) 408, 610, 751
AsuHPI GGTGA 4 cut(s) 45, 313, 703, 716
AvaII GGWCC 3 cut(s) 408, 610, 751
BaeGI GKGCMC 1 cut(s) 915
BalI TGGCCA 1 cut(s) 555
BamHI GGATCC 1 cut(s) 439
Bbv12I GWGCWC 1 cut(s) 915
BbvCI CCTCAGC 1 cut(s) 1052
BbvI GCAGC 8 cut(s) 17, 56, 97, 258, 270, 638, 670, 673
BccI CCATC 3 cut(s) 191, 308, 929
BceAI ACGGC 3 cut(s) 85, 175, 976
BciT130I CCWGG 5 cut(s) 173, 325, 412, 563, 792
BcoDI GTCTC 1 cut(s) 848
BfaI CTAG 1 cut(s) 32
BlpI GCTNAGC 1 cut(s) 635
Bme1390I CCNGG 5 cut(s) 173, 325, 412, 563, 792
Bme18I GGWCC 3 cut(s) 408, 610, 751
BmgT120I GGNCC 3 cut(s) 408, 610, 751
BmiI GGNNCC 5 cut(s) 73, 409, 441, 752, 753
BmrFI CCNGG 5 cut(s) 173, 325, 412, 563, 792
BmsI GCATC 2 cut(s) 593, 972
BpmI CTGGAG 1 cut(s) 990
Bpu10I CCTNAGC 2 cut(s) 1052, 1197
Bpu1102I GCTNAGC 1 cut(s) 635
BsaJI CCNNGG 4 cut(s) 435, 561, 562, 791
BsaWI WCCGGW 3 cut(s) 226, 283, 340
BsaXI ACNNNNNCTCC 4 cut(s) 1004, 1034, 1061, 1091
Bsc4I CCNNNNNNNGG 4 cut(s) 128, 172, 562, 748
Bse118I RCCGGY 1 cut(s) 283
Bse1I ACTGG 5 cut(s) 486, 609, 832, 1007, 1110
Bse3DI GCAATG 1 cut(s) 642
BseAI TCCGGA 2 cut(s) 226, 340
BseBI CCWGG 5 cut(s) 173, 325, 412, 563, 792
BseDI CCNNGG 4 cut(s) 435, 561, 562, 791
BseGI GGATG 3 cut(s) 319, 481, 893
BseLI CCNNNNNNNGG 4 cut(s) 128, 172, 562, 748
BseMI GCAATG 1 cut(s) 642
BseMII CTCAG 2 cut(s) 899, 1066
BseNI ACTGG 5 cut(s) 486, 609, 832, 1007, 1110
BseSI GKGCMC 1 cut(s) 915
BseX3I CGGCCG 1 cut(s) 114
BseXI GCAGC 8 cut(s) 17, 56, 97, 258, 270, 638, 670, 673
BseYI CCCAGC 1 cut(s) 754
BsgI GTGCAG 1 cut(s) 654
Bsh1236I CGCG 5 cut(s) 140, 237, 447, 1073, 1089
Bsh1285I CGRYCG 2 cut(s) 97, 117
BshFI GGCC 3 cut(s) 116, 555, 1065
BshTI ACCGGT 1 cut(s) 283
BsiEI CGRYCG 2 cut(s) 97, 117
BsiHKAI GWGCWC 1 cut(s) 915
BsiSI CCGG 3 cut(s) 227, 284, 341
BslFI GGGAC 2 cut(s) 421, 764
BslI CCNNNNNNNGG 4 cut(s) 128, 172, 562, 748
BsmAI GTCTC 1 cut(s) 848
BsmFI GGGAC 2 cut(s) 421, 764
BsmI GAATGC 1 cut(s) 1198
BsnI GGCC 3 cut(s) 116, 555, 1065
Bsp1286I GDGCHC 1 cut(s) 915
Bsp13I TCCGGA 2 cut(s) 226, 340
Bsp143I GATC 6 cut(s) 439, 448, 493, 540, 708, 862
Bsp1720I GCTNAGC 1 cut(s) 635
Bsp19I CCATGG 1 cut(s) 435
Bsp68I TCGCGA 1 cut(s) 1089
BspANI GGCC 3 cut(s) 116, 555, 1065
BspCNI CTCAG 2 cut(s) 898, 1065
BspEI TCCGGA 2 cut(s) 226, 340
BspFNI CGCG 5 cut(s) 140, 237, 447, 1073, 1089
BspLI GGNNCC 5 cut(s) 73, 409, 441, 752, 753
BspPI GGATC 3 cut(s) 434, 443, 447
BsrDI GCAATG 1 cut(s) 642
BsrFI RCCGGY 1 cut(s) 283
BsrI ACTGG 5 cut(s) 486, 609, 832, 1007, 1110
BssAI RCCGGY 1 cut(s) 283
BssECI CCNNGG 4 cut(s) 435, 561, 562, 791
BssMI GATC 6 cut(s) 439, 448, 493, 540, 708, 862
BssT1I CCWWGG 1 cut(s) 435
Bst2UI CCWGG 5 cut(s) 173, 325, 412, 563, 792
Bst4CI ACNGT 3 cut(s) 107, 127, 1144
Bst6I CTCTTC 1 cut(s) 872
BstAPI GCANNNNNTGC 1 cut(s) 837
BstC8I GCNNGC 6 cut(s) 19, 42, 422, 774, 1099, 1136
BstDEI CTNAG 4 cut(s) 635, 885, 1052, 1197
BstDSI CCRYGG 1 cut(s) 435
BstF5I GGATG 3 cut(s) 319, 481, 893
BstFNI CGCG 5 cut(s) 140, 237, 447, 1073, 1089
BstHHI GCGC 3 cut(s) 67, 140, 1075
BstKTI GATC 6 cut(s) 442, 451, 496, 543, 711, 865
BstMAI GTCTC 1 cut(s) 848
BstMBI GATC 6 cut(s) 439, 448, 493, 540, 708, 862
BstMCI CGRYCG 2 cut(s) 97, 117
BstNI CCWGG 5 cut(s) 173, 325, 412, 563, 792
BstNSI RCATGY 1 cut(s) 1172
BstSCI CCNGG 5 cut(s) 171, 323, 410, 561, 790
BstSLI GKGCMC 1 cut(s) 915
BstUI CGCG 5 cut(s) 140, 237, 447, 1073, 1089
BstV1I GCAGC 8 cut(s) 17, 56, 97, 258, 270, 638, 670, 673
BstX2I RGATCY 1 cut(s) 439
BstXI CCANNNNNNTGG 1 cut(s) 907
BstYI RGATCY 1 cut(s) 439
BstZI CGGCCG 1 cut(s) 114
BsuRI GGCC 3 cut(s) 116, 555, 1065
BtgI CCRYGG 1 cut(s) 435
BtgZI GCGATG 1 cut(s) 1104
BtsCI GGATG 3 cut(s) 319, 481, 893
BtsI GCAGTG 3 cut(s) 256, 510, 666
BtsIMutI CAGTG 5 cut(s) 256, 510, 666, 1140, 1243
BtuMI TCGCGA 1 cut(s) 1089
Cac8I GCNNGC 6 cut(s) 19, 42, 422, 774, 1099, 1136
CciNI GCGGCCGC 1 cut(s) 114
CfoI GCGC 3 cut(s) 67, 140, 1075
Cfr10I RCCGGY 1 cut(s) 283
Cfr13I GGNCC 3 cut(s) 408, 610, 751
CseI GACGC 2 cut(s) 129, 1079
CsiI ACCWGGT 1 cut(s) 410
Csp6I GTAC 3 cut(s) 157, 929, 1150
CspAI ACCGGT 1 cut(s) 283
CviAII CATG 8 cut(s) 168, 299, 436, 661, 907, 1034, 1169, 1183
CviQI GTAC 3 cut(s) 157, 929, 1150
DdeI CTNAG 4 cut(s) 635, 885, 1052, 1197
DpnI GATC 6 cut(s) 441, 450, 495, 542, 710, 864
DpnII GATC 6 cut(s) 439, 448, 493, 540, 708, 862
DraIII CACNNNGTG 2 cut(s) 677, 1129
EaeI YGGCCR 3 cut(s) 114, 553, 1063
EagI CGGCCG 1 cut(s) 114
Eam1104I CTCTTC 1 cut(s) 872
EarI CTCTTC 1 cut(s) 872
EclXI CGGCCG 1 cut(s) 114
Eco130I CCWWGG 1 cut(s) 435
Eco47I GGWCC 3 cut(s) 408, 610, 751
Eco52I CGGCCG 1 cut(s) 114
EcoO109I RGGNCCY 1 cut(s) 751
EcoRI GAATTC 1 cut(s) 334
EcoRII CCWGG 5 cut(s) 171, 323, 410, 561, 790
EcoT14I CCWWGG 1 cut(s) 435
EcoT22I ATGCAT 1 cut(s) 987
ErhI CCWWGG 1 cut(s) 435
FaeI CATG 8 cut(s) 171, 302, 439, 664, 910, 1037, 1172, 1186
FaqI GGGAC 2 cut(s) 421, 764
FatI CATG 8 cut(s) 167, 298, 435, 660, 906, 1033, 1168, 1182
FauI CCCGC 2 cut(s) 260, 452
FokI GGATG 3 cut(s) 326, 488, 880
FspBI CTAG 1 cut(s) 32
GlaI GCGC 3 cut(s) 66, 139, 1074
GsaI CCCAGC 1 cut(s) 758
GsuI CTGGAG 1 cut(s) 990
HaeIII GGCC 3 cut(s) 116, 555, 1065
HapII CCGG 3 cut(s) 227, 284, 341
HgaI GACGC 2 cut(s) 129, 1079
HhaI GCGC 3 cut(s) 67, 140, 1075
Hin1II CATG 8 cut(s) 171, 302, 439, 664, 910, 1037, 1172, 1186
Hin6I GCGC 3 cut(s) 65, 138, 1073
HinP1I GCGC 3 cut(s) 65, 138, 1073
HincII GTYRAC 1 cut(s) 891
HindII GTYRAC 1 cut(s) 891
HinfI GANTC 3 cut(s) 223, 318, 361
HpaII CCGG 3 cut(s) 227, 284, 341
HphI GGTGA 4 cut(s) 45, 313, 703, 716
Hpy166II GTNNAC 6 cut(s) 157, 610, 799, 891, 913, 1012
Hpy188I TCNGA 4 cut(s) 453, 595, 725, 1081
Hpy188III TCNNGA 5 cut(s) 227, 331, 341, 1088, 1124
Hpy8I GTNNAC 6 cut(s) 157, 610, 799, 891, 913, 1012
Hpy99I CGWCG 2 cut(s) 145, 148
HpyAV CCTTC 3 cut(s) 224, 590, 1049
HpyCH4III ACNGT 3 cut(s) 107, 127, 1144
HpyCH4V TGCA 9 cut(s) 44, 217, 671, 772, 913, 985, 1166, 1172, 1226
HpyF3I CTNAG 4 cut(s) 635, 885, 1052, 1197
Hsp92II CATG 8 cut(s) 171, 302, 439, 664, 910, 1037, 1172, 1186
HspAI GCGC 3 cut(s) 65, 138, 1073
KflI GGGWCCC 1 cut(s) 751
Kpn2I TCCGGA 2 cut(s) 226, 340
Kzo9I GATC 6 cut(s) 439, 448, 493, 540, 708, 862
LmnI GCTCC 1 cut(s) 77
Lsp1109I GCAGC 8 cut(s) 17, 56, 97, 258, 270, 638, 670, 673
LweI GCATC 2 cut(s) 593, 972
MabI ACCWGGT 1 cut(s) 410
MaeI CTAG 1 cut(s) 32
MaeIII GTNAC 4 cut(s) 184, 319, 823, 1219
MalI GATC 6 cut(s) 441, 450, 495, 542, 710, 864
MboI GATC 6 cut(s) 439, 448, 493, 540, 708, 862
MboII GAAGA 3 cut(s) 550, 843, 859
MflI RGATCY 1 cut(s) 439
MhlI GDGCHC 1 cut(s) 915
MlsI TGGCCA 1 cut(s) 555
MluCI AATT 8 cut(s) 334, 455, 463, 544, 764, 847, 924, 1159
MluNI TGGCCA 1 cut(s) 555
MlyI GAGTC 1 cut(s) 327
MmeI TCCRAC 1 cut(s) 1047
MnlI CCTC 8 cut(s) 38, 66, 398, 894, 1014, 1028, 1053, 1061
Mox20I TGGCCA 1 cut(s) 555
Mph1103I ATGCAT 1 cut(s) 987
MroI TCCGGA 2 cut(s) 226, 340
MscI TGGCCA 1 cut(s) 555
MseI TTAA 4 cut(s) 273, 290, 974, 999
Msp20I TGGCCA 1 cut(s) 555
MspA1I CMGCKG 2 cut(s) 261, 758
MspI CCGG 3 cut(s) 227, 284, 341
MspR9I CCNGG 5 cut(s) 173, 325, 412, 563, 792
Mva1269I GAATGC 1 cut(s) 1198
MvaI CCWGG 5 cut(s) 173, 325, 412, 563, 792
MvnI CGCG 5 cut(s) 140, 237, 447, 1073, 1089
NcoI CCATGG 1 cut(s) 435
NdeII GATC 6 cut(s) 439, 448, 493, 540, 708, 862
NlaIII CATG 8 cut(s) 171, 302, 439, 664, 910, 1037, 1172, 1186
NlaIV GGNNCC 5 cut(s) 73, 409, 441, 752, 753
NmuCI GTSAC 3 cut(s) 184, 319, 1219
NotI GCGGCCGC 1 cut(s) 114
NruI TCGCGA 1 cut(s) 1089
NsiI ATGCAT 1 cut(s) 987
NspI RCATGY 1 cut(s) 1172
PasI CCCWGGG 1 cut(s) 562
PcsI WCGNNNNNNNCGW 1 cut(s) 1077
PctI GAATGC 1 cut(s) 1198
PfeI GAWTC 2 cut(s) 223, 361
PflMI CCANNNNNTGG 1 cut(s) 562
PinAI ACCGGT 1 cut(s) 283
PleI GAGTC 1 cut(s) 326
PpsI GAGTC 1 cut(s) 326
PpuMI RGGWCCY 1 cut(s) 751
Psp5II RGGWCCY 1 cut(s) 751
Psp6I CCWGG 5 cut(s) 171, 323, 410, 561, 790
PspFI CCCAGC 1 cut(s) 754
PspGI CCWGG 5 cut(s) 171, 323, 410, 561, 790
PspN4I GGNNCC 5 cut(s) 73, 409, 441, 752, 753
PspPI GGNCC 3 cut(s) 408, 610, 751
PspPPI RGGWCCY 1 cut(s) 751
PsuI RGATCY 1 cut(s) 439
RruI TCGCGA 1 cut(s) 1089
RsaI GTAC 3 cut(s) 158, 930, 1151
RsaNI GTAC 3 cut(s) 157, 929, 1150
SaqAI TTAA 4 cut(s) 273, 290, 974, 999
Sau3AI GATC 6 cut(s) 439, 448, 493, 540, 708, 862
Sau96I GGNCC 3 cut(s) 408, 610, 751
SchI GAGTC 1 cut(s) 327
ScrFI CCNGG 5 cut(s) 173, 325, 412, 563, 792
SduI GDGCHC 1 cut(s) 915
SexAI ACCWGGT 1 cut(s) 410
SfaNI GCATC 2 cut(s) 593, 972
SinI GGWCC 3 cut(s) 408, 610, 751
Sse9I AATT 8 cut(s) 334, 455, 463, 544, 764, 847, 924, 1159
SspMI CTAG 1 cut(s) 32
StyD4I CCNGG 5 cut(s) 171, 323, 410, 561, 790
StyI CCWWGG 1 cut(s) 435
TaaI ACNGT 3 cut(s) 107, 127, 1144
TaqI TCGA 2 cut(s) 61, 93
TasI AATT 8 cut(s) 334, 455, 463, 544, 764, 847, 924, 1159
TatI WGTACW 1 cut(s) 1149
TauI GCSGC 8 cut(s) 116, 119, 240, 258, 264, 267, 761, 1065
TfiI GAWTC 2 cut(s) 223, 361
Tru1I TTAA 4 cut(s) 273, 290, 974, 999
Tru9I TTAA 4 cut(s) 273, 290, 974, 999
TscAI CASTG 4 cut(s) 256, 510, 673, 1147
TseFI GTSAC 3 cut(s) 184, 319, 1219
TseI GCWGC 9 cut(s) 5, 44, 110, 246, 258, 626, 683, 686, 1237
Tsp45I GTSAC 3 cut(s) 184, 319, 1219
TspDTI ATGAA 5 cut(s) 75, 492, 632, 677, 1168
TspGWI ACGGA 1 cut(s) 390
TspRI CASTG 4 cut(s) 256, 510, 673, 1147
Van91I CCANNNNNTGG 1 cut(s) 562
VneI GTGCAC 1 cut(s) 911
VpaK11BI GGWCC 3 cut(s) 408, 610, 751
XapI RAATTY 2 cut(s) 334, 455
XceI RCATGY 1 cut(s) 1172
XcmI CCANNNNNNNNNTGG 1 cut(s) 904
XspI CTAG 1 cut(s) 32
Zsp2I ATGCAT 1 cut(s) 987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.