pycom09g04020
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
2978795 .. 2980471
1677 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g04020.3

Sequence Viewer

Length: 801 bp
ATGGCCAACTCTTTCAGCATTCTGCTTCTTGTAGCTCTACTTTGTGTTTCAGCTGCAAGAACTAAGCCGCAATTAATCGGCAATGTCGACGGCGGCATTTGCAAATCGCTGGTGGAGACACAAGGCTACCCTTGCCAAGAACATAAAGTAACAACAGAAGATGGTTACATCCTTGGTTTGCAAAGGATTCCCGCTGGGAAGTCTGCTGGTAATGAGACAGCAGCTAAGCTGCCTGTTTTGTTACACCACGGGATCCTTATGGATGCTTCAGCATGGCTACTCAATTCGCCGGACAAAGCTTTGGCGTTTATCTTGGCAGACAATGGTTTCGATGTATGGCTTGCCAACAGTCGCGGCACAGTCTCCAGCCGTGGACACAAAACACTTACTCCGCTTTATCCGGCTTACTGGGACTGGTCATGGGATCAATTGGCTGCTTATGATCTTCCTGCATTGTTTGCGTATGTAAACAATCAAACAGGACAGAAATTACACTATGTTGGGCATTCCTTGGGAACTTTAACTCCCCTAGCAGCCTTCTCCCAAGGAAAACTGGTAAACATGCTAAGATCAGCTGCATTGCTTGCCCCAATTGCTTATCTTGGTCAGATGCGCTCACCCTTTGCACGAACTGCTGTCGATGCATTCTTAGCTCAACAAGTTTTATCTGATCTCATCGAAATCCCAATAGGCAGGTGCAGCAAATTCTGCAGTATATCTGCGCAAGACCGGGCAGCGGCTGCTCCAACTACCTCACAGCTACAACAGGGCCAAATTGCTGCCTCGGTTCTTCAAGCATAA

Protein Analysis

267

Amino Acids

28.48

Weight (kDa)

8.26

Isoelectric Point (pI)

36.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000628)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 684
Acc16I TGCGCA 1 cut(s) 723
Acc36I ACCTGC 1 cut(s) 684
AccI GTMKAC 1 cut(s) 87
AccII CGCG 1 cut(s) 354
AciI CCGC 6 cut(s) 68, 93, 192, 354, 392, 737
AclWI GGATC 3 cut(s) 247, 260, 432
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 1 cut(s) 704
AcuI CTGAAG 1 cut(s) 252
AfiI CCNNNNNNNGG 1 cut(s) 736
AgsI TTSAA 1 cut(s) 794
AloI GAACNNNNNNTCC 2 cut(s) 508, 540
AluBI AGCT 8 cut(s) 35, 53, 224, 229, 299, 575, 653, 760
AluI AGCT 8 cut(s) 35, 53, 224, 229, 299, 575, 653, 760
Alw26I GTCTC 3 cut(s) 110, 209, 367
AlwI GGATC 3 cut(s) 247, 260, 432
AlwNI CAGNNNCTG 1 cut(s) 740
AoxI GGCC 2 cut(s) 3, 769
ApoI RAATTY 1 cut(s) 704
ArsI GACNNNNNNTTYG 2 cut(s) 311, 343
AseI ATTAAT 1 cut(s) 74
AspLEI GCGC 2 cut(s) 615, 724
AspS9I GGNCC 1 cut(s) 769
AsuC2I CCSGG 1 cut(s) 731
AsuHPI GGTGA 1 cut(s) 609
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 252
BccI CCATC 1 cut(s) 155
BceAI ACGGC 2 cut(s) 106, 354
BcnI CCSGG 1 cut(s) 731
BcoDI GTCTC 3 cut(s) 110, 209, 367
BfaI CTAG 1 cut(s) 530
BfmI CTRYAG 1 cut(s) 709
BfuAI ACCTGC 1 cut(s) 684
BlpI GCTNAGC 1 cut(s) 225
Bme1390I CCNGG 1 cut(s) 731
BmgT120I GGNCC 1 cut(s) 769
BmiI GGNNCC 1 cut(s) 254
BmrFI CCNGG 1 cut(s) 731
BmrI ACTGGG 1 cut(s) 418
BmsI GCATC 3 cut(s) 253, 600, 631
BmuI ACTGGG 1 cut(s) 418
BpmI CTGGAG 1 cut(s) 349
Bpu1102I GCTNAGC 1 cut(s) 225
BpuMI CCSGG 1 cut(s) 731
BsaJI CCNNGG 6 cut(s) 172, 247, 370, 510, 544, 783
BsaXI ACNNNNNCTCC 4 cut(s) 373, 403, 508, 538
Bsc4I CCNNNNNNNGG 1 cut(s) 736
Bse1I ACTGG 3 cut(s) 413, 419, 558
Bse3DI GCAATG 2 cut(s) 88, 578
BseDI CCNNGG 6 cut(s) 172, 247, 370, 510, 544, 783
BseGI GGATG 2 cut(s) 168, 268
BseLI CCNNNNNNNGG 1 cut(s) 736
BseMI GCAATG 2 cut(s) 88, 578
BseNI ACTGG 3 cut(s) 413, 419, 558
BseYI CCCAGC 1 cut(s) 194
BsgI GTGCAG 1 cut(s) 718
Bsh1236I CGCG 1 cut(s) 354
BshFI GGCC 2 cut(s) 5, 771
BsiSI CCGG 3 cut(s) 290, 401, 730
BslFI GGGAC 1 cut(s) 425
BslI CCNNNNNNNGG 1 cut(s) 736
BsmAI GTCTC 3 cut(s) 110, 209, 367
BsmFI GGGAC 1 cut(s) 425
BsmI GAATGC 3 cut(s) 18, 505, 644
BsnI GGCC 2 cut(s) 5, 771
Bsp143I GATC 5 cut(s) 252, 424, 442, 569, 670
Bsp1720I GCTNAGC 1 cut(s) 225
BspACI CCGC 6 cut(s) 68, 93, 192, 354, 392, 737
BspANI GGCC 2 cut(s) 5, 771
BspFNI CGCG 1 cut(s) 354
BspLI GGNNCC 1 cut(s) 254
BspMAI CTGCAG 1 cut(s) 713
BspMI ACCTGC 1 cut(s) 684
BspPI GGATC 3 cut(s) 247, 260, 432
BsrDI GCAATG 2 cut(s) 88, 578
BsrI ACTGG 3 cut(s) 413, 419, 558
BssECI CCNNGG 6 cut(s) 172, 247, 370, 510, 544, 783
BssMI GATC 5 cut(s) 252, 424, 442, 569, 670
BssT1I CCWWGG 3 cut(s) 172, 510, 544
Bst4CI ACNGT 2 cut(s) 350, 361
BstAPI GCANNNNNTGC 5 cut(s) 458, 584, 632, 708, 740
BstC8I GCNNGC 2 cut(s) 342, 585
BstDEI CTNAG 4 cut(s) 63, 225, 566, 649
BstDSI CCRYGG 2 cut(s) 247, 370
BstF5I GGATG 2 cut(s) 168, 268
BstFNI CGCG 1 cut(s) 354
BstHHI GCGC 2 cut(s) 615, 724
BstKTI GATC 5 cut(s) 255, 427, 445, 572, 673
BstMAI GTCTC 3 cut(s) 110, 209, 367
BstMBI GATC 5 cut(s) 252, 424, 442, 569, 670
BstNSI RCATGY 1 cut(s) 565
BstSCI CCNGG 1 cut(s) 729
BstSFI CTRYAG 1 cut(s) 709
BstUI CGCG 1 cut(s) 354
BstX2I RGATCY 1 cut(s) 252
BstYI RGATCY 1 cut(s) 252
BsuRI GGCC 2 cut(s) 5, 771
BtgI CCRYGG 2 cut(s) 247, 370
BtsCI GGATG 2 cut(s) 168, 268
BveI ACCTGC 1 cut(s) 684
Cac8I GCNNGC 2 cut(s) 342, 585
CaiI CAGNNNCTG 1 cut(s) 740
CfoI GCGC 2 cut(s) 615, 724
Cfr13I GGNCC 1 cut(s) 769
CviAII CATG 3 cut(s) 273, 420, 562
DdeI CTNAG 4 cut(s) 63, 225, 566, 649
DpnI GATC 5 cut(s) 254, 426, 444, 571, 672
DpnII GATC 5 cut(s) 252, 424, 442, 569, 670
EaeI YGGCCR 1 cut(s) 3
Eco130I CCWWGG 3 cut(s) 172, 510, 544
Eco57I CTGAAG 1 cut(s) 252
EcoT14I CCWWGG 3 cut(s) 172, 510, 544
EcoT22I ATGCAT 1 cut(s) 646
ErhI CCWWGG 3 cut(s) 172, 510, 544
FaeI CATG 3 cut(s) 276, 423, 565
FaqI GGGAC 1 cut(s) 425
FatI CATG 3 cut(s) 272, 419, 561
FauI CCCGC 1 cut(s) 199
FblI GTMKAC 1 cut(s) 87
FokI GGATG 2 cut(s) 155, 275
FspBI CTAG 1 cut(s) 530
FspI TGCGCA 1 cut(s) 723
GlaI GCGC 2 cut(s) 614, 723
GsaI CCCAGC 1 cut(s) 198
GsuI CTGGAG 1 cut(s) 349
HaeIII GGCC 2 cut(s) 5, 771
HapII CCGG 3 cut(s) 290, 401, 730
HhaI GCGC 2 cut(s) 615, 724
Hin1II CATG 3 cut(s) 276, 423, 565
Hin6I GCGC 2 cut(s) 613, 722
HinP1I GCGC 2 cut(s) 613, 722
HincII GTYRAC 1 cut(s) 88
HindII GTYRAC 1 cut(s) 88
HindIII AAGCTT 1 cut(s) 297
HinfI GANTC 1 cut(s) 187
HpaII CCGG 3 cut(s) 290, 401, 730
HphI GGTGA 1 cut(s) 609
Hpy166II GTNNAC 4 cut(s) 88, 374, 469, 559
Hpy188I TCNGA 2 cut(s) 609, 670
Hpy8I GTNNAC 4 cut(s) 88, 374, 469, 559
Hpy99I CGWCG 1 cut(s) 92
HpyAV CCTTC 1 cut(s) 547
HpyCH4III ACNGT 2 cut(s) 350, 361
HpyCH4V TGCA 9 cut(s) 56, 102, 181, 452, 578, 626, 644, 699, 711
HpyF3I CTNAG 4 cut(s) 63, 225, 566, 649
Hsp92II CATG 3 cut(s) 276, 423, 565
HspAI GCGC 2 cut(s) 613, 722
Kzo9I GATC 5 cut(s) 252, 424, 442, 569, 670
LmnI GCTCC 1 cut(s) 748
LweI GCATC 3 cut(s) 253, 600, 631
MaeI CTAG 1 cut(s) 530
MaeIII GTNAC 3 cut(s) 148, 164, 240
MalI GATC 5 cut(s) 254, 426, 444, 571, 672
MboI GATC 5 cut(s) 252, 424, 442, 569, 670
MboII GAAGA 3 cut(s) 170, 437, 782
MfeI CAATTG 2 cut(s) 428, 591
MflI RGATCY 1 cut(s) 252
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 7 cut(s) 71, 283, 428, 488, 591, 704, 774
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 1 cut(s) 770
MnlI CCTC 2 cut(s) 763, 793
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 646
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 74, 521
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 4 cut(s) 53, 194, 575, 737
MspI CCGG 3 cut(s) 290, 401, 730
MspR9I CCNGG 1 cut(s) 731
MunI CAATTG 2 cut(s) 428, 591
Mva1269I GAATGC 3 cut(s) 18, 505, 644
MvnI CGCG 1 cut(s) 354
NciI CCSGG 1 cut(s) 731
NdeII GATC 5 cut(s) 252, 424, 442, 569, 670
NlaIII CATG 3 cut(s) 276, 423, 565
NlaIV GGNNCC 1 cut(s) 254
NsbI TGCGCA 1 cut(s) 723
NsiI ATGCAT 1 cut(s) 646
NspI RCATGY 1 cut(s) 565
PaqCI CACCTGC 1 cut(s) 684
PcsI WCGNNNNNNNCGW 1 cut(s) 84
PctI GAATGC 3 cut(s) 18, 505, 644
PfeI GAWTC 1 cut(s) 187
PshBI ATTAAT 1 cut(s) 74
PspFI CCCAGC 1 cut(s) 194
PspN4I GGNNCC 1 cut(s) 254
PspPI GGNCC 1 cut(s) 769
PstI CTGCAG 1 cut(s) 713
PstNI CAGNNNCTG 1 cut(s) 740
PsuI RGATCY 1 cut(s) 252
PvuII CAGCTG 2 cut(s) 53, 575
SalI GTCGAC 1 cut(s) 86
SaqAI TTAA 2 cut(s) 74, 521
Sau3AI GATC 5 cut(s) 252, 424, 442, 569, 670
Sau96I GGNCC 1 cut(s) 769
ScrFI CCNGG 1 cut(s) 731
SfaNI GCATC 3 cut(s) 253, 600, 631
SfcI CTRYAG 1 cut(s) 709
Sse9I AATT 7 cut(s) 71, 283, 428, 488, 591, 704, 774
SsiI CCGC 6 cut(s) 68, 93, 192, 354, 392, 737
SspMI CTAG 1 cut(s) 530
StyD4I CCNGG 1 cut(s) 729
StyI CCWWGG 3 cut(s) 172, 510, 544
TaaI ACNGT 2 cut(s) 350, 361
TaqI TCGA 4 cut(s) 87, 330, 639, 678
TasI AATT 7 cut(s) 71, 283, 428, 488, 591, 704, 774
TauI GCSGC 4 cut(s) 70, 96, 357, 740
TfiI GAWTC 1 cut(s) 187
Tru1I TTAA 2 cut(s) 74, 521
Tru9I TTAA 2 cut(s) 74, 521
VspI ATTAAT 1 cut(s) 74
XapI RAATTY 1 cut(s) 704
XceI RCATGY 1 cut(s) 565
XmiI GTMKAC 1 cut(s) 87
XspI CTAG 1 cut(s) 530
Zsp2I ATGCAT 1 cut(s) 646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.