MD17G1107400.v1.1
ERF Family

Belongs to the AB hydrolase superfamily. Lipase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
9240465 .. 9245844
5380 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1107400.v1.1.491

Sequence Viewer

Length: 1524 bp
ATGTCAATGAAACGTTTTATAAAACTCTTGGAGTCTCGAATTTGGTATCCTATTGTCATGCGATTGACATTTATAGAGTTCAACAAGCAATTGAAATTTCACGGTCGAGGAACCTCCAAAGGCGATTTGTACCAGGAAACGATTACTAAACCTATGAAGATGTTGGCTAATAAGATTTTAAGCTGTATTGTTGTAGTTATTCTTGTCTGTGAGTCCGTAGTTGGAACCAGAACAAAGTTGTTCGCAGCTAACAAGGTGCAGGATGCTGCTTCTGCATTGGCTCCGTCTCCCAGTGATGACGGAATCTGTGCAACAATGGTGGCAACACAAGGCTATGCTTGTGAAGAACACACGGTGACAACACAAGATGGATACATTCTCAGTATGCAGAGAATTCCAGCAGGGAAGTCAGGGGAGGCGTCGGGGAATGGGGTACCAGTACTTCTGCAACACGGTCTTCTGATGGATGGGATAACATGGCTGCTGTTACCTCCAGGCCAATCTTTGGCATTCCTCTTAGCTGACAACGGGTATGAGGTGTGGATTGGGAACACCCGCGGAACCAAGTACAGCCTCGGACACACATCACTCAGTCCTGATGATCGGGCTTATTGGGAATGGTCGTGGGATGAACTCGTCGCTTATGATCTCCCAGCTACTTTCCAGTATGTGCGCGATCAAACCGGACAGAAAATTCACTATGTTGGACATTCGCTGGGAACATTGGTTGCTTTTGCTGCATTTTCCAAAGACATGCAGCTGAAGAACTTGAGATCAGCCGCCCTACTTAGCCCGATTGCTTACCTTGGTCAGATGCCCTCACCCCTTGCAAGAACAGCTGCTGAAAATTATGTTGCTGAGGCCGCAGTCGAATTTCTGAAGGCTGTCTGCCAGGAACCAGGCGTTGACTGCACCCATTTATTGACAGCGTTCACCGGTATGATAAGAGACGGAATGATTGCAATGTTTGACTACAAGGACGGGAATATGCAGCACTACGGGCAGCCTACTCCTCCAGTGTACAATATGACAAGCATTCCAGATGACCTTCCTCTATTCCTCAGTTACGGAGGAGCAGATGCCCTCTCCGACGTCAAAGATGTGAAGCTGCTGATGAATAACCTCGAAAATCATGACGGAGATAAGCTTGTGCTTCAGTATAGAGACGATTACGCTCATGCAGATTTTGTCATGGGTGAAACTGCTAAGCAAGATGTGCAGGTGCAGCAAATTCTGCAGTATATGCGCGCAAGACCAGGCAGTGGCTGCTCCAACTACCTCACAGCTTCAACAGGTAGTGACAATGTTATAGAGAAACTTACCTACATCGGAGATGCCCGTTTCGTGGAAGTCCTTCTCACAGTGTTAAGATTCGTCATTTACCCTTTTAACTTGAAAGTTTTTTATAGGCCCAAATTGCTGCCTCGGTCCTTCAAGCATAAATCTGTTTCTTCAACATACGCCCCAGAGAAACTTACCTACAATGGGTTTAGAGTAAGTCTCTTTCAATTCAGTGTTCAGTAA

Protein Analysis

508

Amino Acids

56.44

Weight (kDa)

6.6

Isoelectric Point (pI)

33.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydro_lipase PF04083 104 - 162 8.3e-21 Partial alpha/beta-hydrolase lipase region
Abhydrolase_1 PF00561 146 - 283 8.5e-12 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 147 - 296 5.4e-06 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000628)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 20
AarI CACCTGC 1 cut(s) 1210
AatII GACGTC 1 cut(s) 1095
Acc36I ACCTGC 1 cut(s) 1210
Acc65I GGTACC 1 cut(s) 433
AccB1I GGYRCC 1 cut(s) 433
AccB7I CCANNNNNTGG 2 cut(s) 505, 1262
AccII CGCG 3 cut(s) 558, 675, 1248
AciI CCGC 4 cut(s) 556, 558, 780, 864
AclI AACGTT 1 cut(s) 13
AcsI RAATTY 6 cut(s) 39, 95, 393, 693, 872, 1230
AcuI CTGAAG 3 cut(s) 782, 899, 1139
AcyI GRCGYC 2 cut(s) 419, 1092
AdeI CACNNNGTG 1 cut(s) 355
AfaI GTAC 5 cut(s) 131, 435, 441, 569, 1022
AfiI CCNNNNNNNGG 4 cut(s) 505, 1262, 1345, 1485
AgeI ACCGGT 1 cut(s) 935
AgsI TTSAA 7 cut(s) 82, 94, 1290, 1396, 1435, 1455, 1508
AjnI CCWGG 5 cut(s) 132, 493, 891, 898, 1255
AluBI AGCT 9 cut(s) 183, 248, 521, 656, 760, 839, 1108, 1147, 1286
AluI AGCT 9 cut(s) 183, 248, 521, 656, 760, 839, 1108, 1147, 1286
Alw26I GTCTC 5 cut(s) 39, 291, 942, 1158, 1505
AlwNI CAGNNNCTG 2 cut(s) 842, 1266
AoxI GGCC 3 cut(s) 496, 861, 1409
ApoI RAATTY 6 cut(s) 39, 95, 393, 693, 872, 1230
AsiGI ACCGGT 1 cut(s) 935
Asp700I GAANNNNTTC 1 cut(s) 1353
Asp718I GGTACC 1 cut(s) 433
AspLEI GCGC 3 cut(s) 675, 1248, 1250
AspS9I GGNCC 2 cut(s) 1410, 1428
AsuHPI GGTGA 4 cut(s) 367, 813, 925, 1208
AvaII GGWCC 1 cut(s) 1428
BanI GGYRCC 1 cut(s) 433
BarI GAAGNNNNNNTAC 2 cut(s) 426, 458
BbsI GAAGAC 1 cut(s) 449
BbvCI CCTCAGC 1 cut(s) 858
BccI CCATC 3 cut(s) 362, 457, 461
BciT130I CCWGG 5 cut(s) 134, 495, 893, 900, 1257
BciVI GTATCC 2 cut(s) 57, 365
BcoDI GTCTC 5 cut(s) 39, 291, 942, 1158, 1505
BfmI CTRYAG 1 cut(s) 1235
BfuAI ACCTGC 1 cut(s) 1210
BfuI GTATCC 2 cut(s) 57, 365
BlpI GCTNAGC 1 cut(s) 1206
BmcAI AGTACT 1 cut(s) 441
Bme1390I CCNGG 5 cut(s) 134, 495, 893, 900, 1257
Bme18I GGWCC 1 cut(s) 1428
BmgT120I GGNCC 2 cut(s) 1410, 1428
BmiI GGNNCC 6 cut(s) 112, 226, 282, 435, 562, 897
BmrFI CCNGG 5 cut(s) 134, 495, 893, 900, 1257
BmrI ACTGGG 1 cut(s) 285
BmsI GCATC 4 cut(s) 253, 804, 1069, 1324
BmuI ACTGGG 1 cut(s) 285
BpiI GAAGAC 1 cut(s) 449
BplI GAGNNNNNCTC 2 cut(s) 1485, 1517
BpmI CTGGAG 2 cut(s) 477, 999
Bpu10I CCTNAGC 1 cut(s) 858
Bpu1102I GCTNAGC 1 cut(s) 1206
BpuEI CTTGAG 1 cut(s) 790
BsaHI GRCGYC 2 cut(s) 419, 1092
BsaJI CCNNGG 4 cut(s) 556, 574, 805, 1424
BsaWI WCCGGW 2 cut(s) 683, 935
Bsc4I CCNNNNNNNGG 4 cut(s) 505, 1262, 1345, 1485
Bse118I RCCGGY 1 cut(s) 935
Bse1I ACTGG 4 cut(s) 291, 437, 664, 1016
Bse3DI GCAATG 1 cut(s) 969
BseBI CCWGG 5 cut(s) 134, 495, 893, 900, 1257
BseDI CCNNGG 4 cut(s) 556, 574, 805, 1424
BseGI GGATG 3 cut(s) 268, 472, 634
BseLI CCNNNNNNNGG 4 cut(s) 505, 1262, 1345, 1485
BseMI GCAATG 1 cut(s) 969
BseMII CTCAG 4 cut(s) 394, 604, 849, 1075
BseNI ACTGG 4 cut(s) 291, 437, 664, 1016
BsePI GCGCGC 1 cut(s) 1246
BseRI GAGGAG 2 cut(s) 1002, 1086
BseYI CCCAGC 2 cut(s) 652, 715
BsgI GTGCAG 4 cut(s) 278, 895, 1238, 1244
Bsh1236I CGCG 3 cut(s) 558, 675, 1248
Bsh1285I CGRYCG 1 cut(s) 106
BshFI GGCC 3 cut(s) 498, 863, 1411
BshNI GGYRCC 1 cut(s) 433
BshTI ACCGGT 1 cut(s) 935
BsiEI CGRYCG 1 cut(s) 106
BsiSI CCGG 2 cut(s) 684, 936
BslI CCNNNNNNNGG 4 cut(s) 505, 1262, 1345, 1485
BsmAI GTCTC 5 cut(s) 39, 291, 942, 1158, 1505
BsmBI CGTCTC 3 cut(s) 291, 942, 1158
BsmI GAATGC 2 cut(s) 509, 1035
BsnI GGCC 3 cut(s) 498, 863, 1411
Bsp1407I TGTACA 1 cut(s) 1020
Bsp143I GATC 4 cut(s) 601, 646, 676, 773
Bsp1720I GCTNAGC 1 cut(s) 1206
BspACI CCGC 4 cut(s) 556, 558, 780, 864
BspANI GGCC 3 cut(s) 498, 863, 1411
BspCNI CTCAG 4 cut(s) 393, 603, 850, 1074
BspFNI CGCG 3 cut(s) 558, 675, 1248
BspHI TCATGA 1 cut(s) 1132
BspLI GGNNCC 6 cut(s) 112, 226, 282, 435, 562, 897
BspMAI CTGCAG 1 cut(s) 1239
BspMI ACCTGC 1 cut(s) 1210
BspT107I GGYRCC 1 cut(s) 433
BsrDI GCAATG 1 cut(s) 969
BsrFI RCCGGY 1 cut(s) 935
BsrGI TGTACA 1 cut(s) 1020
BsrI ACTGG 4 cut(s) 291, 437, 664, 1016
BssAI RCCGGY 1 cut(s) 935
BssECI CCNNGG 4 cut(s) 556, 574, 805, 1424
BssHII GCGCGC 1 cut(s) 1246
BssMI GATC 4 cut(s) 601, 646, 676, 773
BssNI GRCGYC 2 cut(s) 419, 1092
BssT1I CCWWGG 1 cut(s) 805
Bst2UI CCWGG 5 cut(s) 134, 495, 893, 900, 1257
Bst4CI ACNGT 4 cut(s) 104, 355, 455, 1363
BstACI GRCGYC 2 cut(s) 419, 1092
BstAPI GCANNNNNTGC 4 cut(s) 1216, 1234, 1243, 1266
BstAUI TGTACA 1 cut(s) 1020
BstC8I GCNNGC 1 cut(s) 1248
BstDEI CTNAG 7 cut(s) 380, 517, 590, 788, 858, 1061, 1206
BstDSI CCRYGG 1 cut(s) 556
BstF5I GGATG 3 cut(s) 268, 472, 634
BstFNI CGCG 3 cut(s) 558, 675, 1248
BstHHI GCGC 3 cut(s) 675, 1248, 1250
BstKTI GATC 4 cut(s) 604, 649, 679, 776
BstMAI GTCTC 5 cut(s) 39, 291, 942, 1158, 1505
BstMBI GATC 4 cut(s) 601, 646, 676, 773
BstMCI CGRYCG 1 cut(s) 106
BstNI CCWGG 5 cut(s) 134, 495, 893, 900, 1257
BstNSI RCATGY 1 cut(s) 757
BstSCI CCNGG 5 cut(s) 132, 493, 891, 898, 1255
BstSFI CTRYAG 1 cut(s) 1235
BstUI CGCG 3 cut(s) 558, 675, 1248
BstV2I GAAGAC 1 cut(s) 449
BsuI GTATCC 2 cut(s) 57, 365
BsuRI GGCC 3 cut(s) 498, 863, 1411
BtgI CCRYGG 1 cut(s) 556
BtsCI GGATG 3 cut(s) 268, 472, 634
BtsI GCAGTG 1 cut(s) 1267
BtsIMutI CAGTG 5 cut(s) 298, 1023, 1267, 1368, 1519
BveI ACCTGC 1 cut(s) 1210
Cac8I GCNNGC 1 cut(s) 1248
CaiI CAGNNNCTG 2 cut(s) 842, 1266
CciI TCATGA 1 cut(s) 1132
CfoI GCGC 3 cut(s) 675, 1248, 1250
Cfr10I RCCGGY 1 cut(s) 935
Cfr13I GGNCC 2 cut(s) 1410, 1428
Cfr42I CCGCGG 1 cut(s) 559
CseI GACGC 1 cut(s) 408
Csp6I GTAC 5 cut(s) 130, 434, 440, 568, 1021
CspAI ACCGGT 1 cut(s) 935
CspCI CAANNNNNGTGG 2 cut(s) 300, 335
CviAII CATG 6 cut(s) 58, 477, 754, 1133, 1178, 1192
CviQI GTAC 5 cut(s) 130, 434, 440, 568, 1021
DdeI CTNAG 7 cut(s) 380, 517, 590, 788, 858, 1061, 1206
DpnI GATC 4 cut(s) 603, 648, 678, 775
DpnII GATC 4 cut(s) 601, 646, 676, 773
DraIII CACNNNGTG 1 cut(s) 355
Eco130I CCWWGG 1 cut(s) 805
Eco47I GGWCC 1 cut(s) 1428
Eco57I CTGAAG 3 cut(s) 782, 899, 1139
EcoRI GAATTC 1 cut(s) 393
EcoRII CCWGG 5 cut(s) 132, 493, 891, 898, 1255
EcoT14I CCWWGG 1 cut(s) 805
ErhI CCWWGG 1 cut(s) 805
Esp3I CGTCTC 3 cut(s) 291, 942, 1158
FaeI CATG 6 cut(s) 61, 480, 757, 1136, 1181, 1195
FatI CATG 6 cut(s) 57, 476, 753, 1132, 1177, 1191
FauI CCCGC 1 cut(s) 563
FokI GGATG 3 cut(s) 275, 479, 641
GlaI GCGC 3 cut(s) 674, 1247, 1249
GsaI CCCAGC 2 cut(s) 656, 719
GsuI CTGGAG 2 cut(s) 477, 999
HaeIII GGCC 3 cut(s) 498, 863, 1411
HapII CCGG 2 cut(s) 684, 936
HgaI GACGC 1 cut(s) 408
HhaI GCGC 3 cut(s) 675, 1248, 1250
Hin1I GRCGYC 2 cut(s) 419, 1092
Hin1II CATG 6 cut(s) 61, 480, 757, 1136, 1181, 1195
Hin6I GCGC 3 cut(s) 673, 1246, 1248
HinP1I GCGC 3 cut(s) 673, 1246, 1248
HincII GTYRAC 1 cut(s) 907
HindII GTYRAC 1 cut(s) 907
HindIII AAGCTT 1 cut(s) 1145
HinfI GANTC 4 cut(s) 32, 212, 303, 1371
HpaII CCGG 2 cut(s) 684, 936
HphI GGTGA 4 cut(s) 367, 813, 925, 1208
Hpy166II GTNNAC 3 cut(s) 907, 933, 1021
Hpy188I TCNGA 6 cut(s) 462, 578, 813, 879, 1090, 1331
Hpy188III TCNNGA 4 cut(s) 36, 596, 1040, 1133
Hpy8I GTNNAC 3 cut(s) 907, 933, 1021
Hpy99I CGWCG 3 cut(s) 424, 641, 1094
HpyAV CCTTC 4 cut(s) 874, 1058, 1364, 1441
HpyCH4III ACNGT 4 cut(s) 104, 355, 455, 1363
HpyCH4IV ACGT 2 cut(s) 13, 1092
HpyF3I CTNAG 7 cut(s) 380, 517, 590, 788, 858, 1061, 1206
HpySE526I ACGT 2 cut(s) 13, 1092
Hsp92I GRCGYC 2 cut(s) 419, 1092
Hsp92II CATG 6 cut(s) 61, 480, 757, 1136, 1181, 1195
HspAI GCGC 3 cut(s) 673, 1246, 1248
KpnI GGTACC 1 cut(s) 437
KspI CCGCGG 1 cut(s) 559
Kzo9I GATC 4 cut(s) 601, 646, 676, 773
LmnI GCTCC 3 cut(s) 286, 1073, 1274
LweI GCATC 4 cut(s) 253, 804, 1069, 1324
MaeII ACGT 2 cut(s) 13, 1092
MaeIII GTNAC 4 cut(s) 355, 486, 1064, 1298
MalI GATC 4 cut(s) 603, 648, 678, 775
MboI GATC 4 cut(s) 601, 646, 676, 773
MboII GAAGA 5 cut(s) 169, 356, 449, 775, 1443
MfeI CAATTG 1 cut(s) 89
MlyI GAGTC 2 cut(s) 41, 221
MmeI TCCRAC 4 cut(s) 202, 685, 1113, 1296
MroXI GAANNNNTTC 1 cut(s) 1353
MseI TTAA 3 cut(s) 179, 1367, 1389
MslI CAYNNNNRTG 1 cut(s) 938
MspA1I CMGCKG 3 cut(s) 558, 760, 839
MspI CCGG 2 cut(s) 684, 936
MspR9I CCNGG 5 cut(s) 134, 495, 893, 900, 1257
MunI CAATTG 1 cut(s) 89
Mva1269I GAATGC 2 cut(s) 509, 1035
MvaI CCWGG 5 cut(s) 134, 495, 893, 900, 1257
MvnI CGCG 3 cut(s) 558, 675, 1248
NdeII GATC 4 cut(s) 601, 646, 676, 773
NlaIII CATG 6 cut(s) 61, 480, 757, 1136, 1181, 1195
NlaIV GGNNCC 6 cut(s) 112, 226, 282, 435, 562, 897
NmuCI GTSAC 2 cut(s) 355, 1298
NspI RCATGY 1 cut(s) 757
PagI TCATGA 1 cut(s) 1132
PaqCI CACCTGC 1 cut(s) 1210
PauI GCGCGC 1 cut(s) 1246
PctI GAATGC 2 cut(s) 509, 1035
PdmI GAANNNNTTC 1 cut(s) 1353
PfeI GAWTC 2 cut(s) 303, 1371
PflMI CCANNNNNTGG 2 cut(s) 505, 1262
PinAI ACCGGT 1 cut(s) 935
PleI GAGTC 2 cut(s) 40, 220
PpsI GAGTC 2 cut(s) 40, 220
PsiI TTATAA 1 cut(s) 20
Psp1406I AACGTT 1 cut(s) 13
Psp6I CCWGG 5 cut(s) 132, 493, 891, 898, 1255
PspFI CCCAGC 2 cut(s) 652, 715
PspGI CCWGG 5 cut(s) 132, 493, 891, 898, 1255
PspN4I GGNNCC 6 cut(s) 112, 226, 282, 435, 562, 897
PspPI GGNCC 2 cut(s) 1410, 1428
PstI CTGCAG 1 cut(s) 1239
PstNI CAGNNNCTG 2 cut(s) 842, 1266
PteI GCGCGC 1 cut(s) 1246
PvuII CAGCTG 2 cut(s) 760, 839
RsaI GTAC 5 cut(s) 131, 435, 441, 569, 1022
RsaNI GTAC 5 cut(s) 130, 434, 440, 568, 1021
RseI CAYNNNNRTG 1 cut(s) 938
SacII CCGCGG 1 cut(s) 559
SaqAI TTAA 3 cut(s) 179, 1367, 1389
Sau3AI GATC 4 cut(s) 601, 646, 676, 773
Sau96I GGNCC 2 cut(s) 1410, 1428
ScaI AGTACT 1 cut(s) 441
SchI GAGTC 2 cut(s) 41, 221
ScrFI CCNGG 5 cut(s) 134, 495, 893, 900, 1257
SfaNI GCATC 4 cut(s) 253, 804, 1069, 1324
SfcI CTRYAG 1 cut(s) 1235
Sfr303I CCGCGG 1 cut(s) 559
SgrBI CCGCGG 1 cut(s) 559
SinI GGWCC 1 cut(s) 1428
SmiMI CAYNNNNRTG 1 cut(s) 938
SmlI CTYRAG 1 cut(s) 769
SmoI CTYRAG 1 cut(s) 769
SsiI CCGC 4 cut(s) 556, 558, 780, 864
StyD4I CCNGG 5 cut(s) 132, 493, 891, 898, 1255
StyI CCWWGG 1 cut(s) 805
TaaI ACNGT 4 cut(s) 104, 355, 455, 1363
TaiI ACGT 2 cut(s) 16, 1095
TaqI TCGA 4 cut(s) 37, 106, 870, 1125
TaqII GACCGA 1 cut(s) 1416
TatI WGTACW 3 cut(s) 439, 567, 1020
TauI GCSGC 2 cut(s) 782, 866
TfiI GAWTC 2 cut(s) 303, 1371
Tru1I TTAA 3 cut(s) 179, 1367, 1389
Tru9I TTAA 3 cut(s) 179, 1367, 1389
TscAI CASTG 5 cut(s) 298, 1023, 1267, 1368, 1519
TseFI GTSAC 2 cut(s) 355, 1298
Tsp45I GTSAC 2 cut(s) 355, 1298
TspDTI ATGAA 4 cut(s) 23, 170, 645, 1130
TspGWI ACGGA 6 cut(s) 205, 273, 315, 966, 1083, 1152
TspRI CASTG 5 cut(s) 298, 1023, 1267, 1368, 1519
Van91I CCANNNNNTGG 2 cut(s) 505, 1262
VpaK11BI GGWCC 1 cut(s) 1428
XapI RAATTY 6 cut(s) 39, 95, 393, 693, 872, 1230
XceI RCATGY 1 cut(s) 757
XmnI GAANNNNTTC 1 cut(s) 1353
ZraI GACGTC 1 cut(s) 1093
ZrmI AGTACT 1 cut(s) 441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.