Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000548

Physical Location & Seq

Genomic Coordinates Forward (+)

4757856 .. 4762666

Gene Structure 4811 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G14740.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 996 bp

ATGGTCCCCTTTTGGACTACAGTTTCTCGAAATGGCTCATCAGACTCAGAGACGACTCTCCAATCTGCTTCAAAAGCCACAAAACAGTATAAATATCCTTCTCTTCGTCCCTCTCATCGCCTGTCTCTCCTCTTCCTCTTCCCGTTCCATTTATCCGCAAACGGAGCTTGTTTTCGGTGCACCTGCTTCAGCCACTTCAAACTTGAACTGAGAAGGATGGGAAACGAATCATATGAAGACGCCATCGAAGCTCTCAAGAAGCTTCTCATTGAGAAGGATGATCTGAAGGATGTAGCTGCGGCCAAGGTGAAGAAGATCACGGCGGAGCTTCAGGCAGCCTCGTCATCGGACAGCAAATCTTTTGATCCCGTCGAACGAATTAAGGAAGGCTTCGTCACCTTCAAGAAGGAGAAATACGAGACCAATCCTGCTTTGTATGGTGAGCTCGCCAAAGGTCAAAGCCCAAAGTACATGGTGTTTGCTTGTTCGGACTCACGAGTGTGCCCATCACACGTACTAGACTTCCATCCTGGAGATGCCTTCGTGGTTCGTAATATCGCCAATATGGTTCCTCCTTTTGACAAGGTCAAATATGCAGGAGTTGGAGCCGCCATTGAATACGCTGTCTTGCACCTTAAGGTGGAAAACATTGTGGTGATAGGGCACAGTGCATGTGGTGGCATCAAGGGGCTTATGTCATTTCCTCTTGACGGAAACAACTCTACTGACTTCATAGAGGATTGGGTCAAAATCTGTTTACCAGCAAAGTCAAAAGTTTTGGCAGAAAGTGAAAGTTCAGCATTTGAAGACCAATGTGGCCGATGCGAAAGGGAGGCAGTGAATGTGTCACTAGCAAACCTATTGACATATCCATTTGTGAGAGAAGGAGTTGTGAAAGGAACACTTGCTTTGAAGGGAGGCTACTATGACTTTGTTAATGGCTCCTTTGAGCTTTGGGAGCTCCAGTTTGGAATTTCCCCCGTTCATTCTATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004089 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009814 GO:0009817 GO:0009941 GO:0009987 GO:0010033 GO:0010037 GO:0010119 GO:0010319 GO:0015979 GO:0016020 GO:0016829 GO:0016835 GO:0016836 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042221 GO:0042493 GO:0042651 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0048046 GO:0048519 GO:0048580 GO:0048581 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051704 GO:0051707 GO:0055035 GO:0065007 GO:0071944 GO:0072347 GO:0098542 GO:1901700 GO:2000026 GO:2000038 GO:2000122

KEGG Pathways

Metabolic & Signaling

ko00910 map00910

Pfam Domains

Protein Families

Pro_CA

Protein Analysis

331

Amino Acids

36.61

Weight (kDa)

7.06

Isoelectric Point (pI)

51.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pro_CA	PF00484	85 - 243	7.4e-44	Carbonic anhydrase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000548)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01500 AT3G01500 AT3G01500 AT3G01500 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740
fragaria_vesca	FvH4_2g14190 FvH4_3g35690 FvH4_3g35690 FvH4_6g50780 FvH4_6g50780 FvH4_6g50780 FvH4_6g50780
malus_domestica	MD09G1032400.v1.1 MD10G1022000.v1.1 MD10G1022200.v1.1 MD10G1022400.v1.1 MD17G1034000.v1.1
prunus_persica	Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.6G080400_v2.0.a1 Prupe.8G025400_v2.0.a1
pyrus_communis	pycom10g01540 pycom111g02580 pycom17g03140
rosa_chinensis	RchiOBHm_Chr2g0172091 RchiOBHm_Chr2g0172171 RchiOBHm_Chr5g0063841 RchiOBHm_Chr5g0063851 RchiOBHm_Chr6g0276331
rosa_laevigata	RLG00000013403 RLG00000022084 RLG00000022089 RLG00000035683 RLG00000035684
rosa_multiflora	Rmu_co8246953.1_g000001 Rmu_sc0002765.1_g000009 Rmu_sc0002765.1_g000011 Rmu_sc0003665.1_g000009 Rmu_ssc0000252.1_g000041 Rmu_ssc0000252.1_g000047
rosa_roxburghii	Rroxscaffold_1G00016930 Rroxscaffold_2G00080110 Rroxscaffold_7G00192380
rosa_rugosa	Rorug02G0556500 Rorug02G0556600 Rorug02G0556700 Rorug02G0556800 Rorug05G0360800 Rorug06G0100000 Rorug06G0100000
rosa_samantha	Rh2AG632300 Rh2BG642200 Rh2BG645900 Rh2CG612500 Rh2DG653300 Rh2DG660500 Rh5AG418900 Rh5AG419000 Rh5BG435100 Rh5BG435200 Rh5CG458100 Rh5CG458200 Rh5DG447900 Rh5DG448000 Rh6AG211200 Rh6CG217900 Rh6DG208000
rosa_wichuraiana	Rw2G052340 Rw5G039370 Rw5G039380 Rw6G018450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	191
Acc36I	ACCTGC	1 cut(s)	191
AciI	CCGC	4 cut(s)	156, 299, 323, 609
AclWI	GGATC	1 cut(s)	359
AcoI	YGGCCR	2 cut(s)	300, 817
AcsI	RAATTY	1 cut(s)	972
AcuI	CTGAAG	3 cut(s)	172, 305, 314
AcyI	GRCGYC	1 cut(s)	240
AfaI	GTAC	2 cut(s)	470, 516
AfiI	CCNNNNNNNGG	2 cut(s)	640, 710
AflII	CTTAAG	1 cut(s)	635
AflIII	ACRYGT	1 cut(s)	511
AgsI	TTSAA	7 cut(s)	72, 199, 206, 403, 617, 806, 913
AjnI	CCWGG	1 cut(s)	529
AleI	CACNNNNGTG	1 cut(s)	499
AluBI	AGCT	8 cut(s)	167, 251, 262, 296, 328, 445, 952, 961
AluI	AGCT	8 cut(s)	167, 251, 262, 296, 328, 445, 952, 961
Alw21I	GWGCWC	3 cut(s)	182, 447, 963
Alw26I	GTCTC	3 cut(s)	44, 129, 413
Alw44I	GTGCAC	1 cut(s)	178
AlwI	GGATC	1 cut(s)	359
AoxI	GGCC	2 cut(s)	300, 817
ApaLI	GTGCAC	1 cut(s)	178
ApeKI	GCWGC	2 cut(s)	296, 335
ApoI	RAATTY	1 cut(s)	972
AspS9I	GGNCC	1 cut(s)	4
AsuHPI	GGTGA	4 cut(s)	319, 388, 452, 667
AvaII	GGWCC	1 cut(s)	4
BaeGI	GKGCMC	3 cut(s)	182, 506, 666
BanII	GRGCYC	2 cut(s)	447, 963
BarI	GAAGNNNNNNTAC	4 cut(s)	398, 430, 905, 937
BauI	CACGAG	1 cut(s)	495
BbsI	GAAGAC	2 cut(s)	243, 813
Bbv12I	GWGCWC	3 cut(s)	182, 447, 963
BbvI	GCAGC	2 cut(s)	283, 347
BccI	CCATC	4 cut(s)	211, 251, 514, 534
BceAI	ACGGC	1 cut(s)	336
BciT130I	CCWGG	1 cut(s)	531
BcoDI	GTCTC	3 cut(s)	44, 129, 413
BfaI	CTAG	2 cut(s)	518, 851
BfmI	CTRYAG	1 cut(s)	18
BfrI	CTTAAG	1 cut(s)	635
BfuAI	ACCTGC	1 cut(s)	191
BisI	GCNGC	4 cut(s)	297, 300, 336, 609
BlsI	GCNGC	4 cut(s)	298, 301, 337, 610
Bme1390I	CCNGG	1 cut(s)	531
Bme18I	GGWCC	1 cut(s)	4
BmgT120I	GGNCC	1 cut(s)	4
BmiI	GGNNCC	4 cut(s)	6, 570, 607, 943
BmrFI	CCNGG	1 cut(s)	531
BmsI	GCATC	3 cut(s)	526, 690, 812
BpiI	GAAGAC	2 cut(s)	243, 813
BpmI	CTGGAG	2 cut(s)	552, 947
BpuEI	CTTGAG	1 cut(s)	239
BsaAI	YACGTR	1 cut(s)	514
BsaHI	GRCGYC	1 cut(s)	240
BsaI	GGTCTC	1 cut(s)	413
BsaJI	CCNNGG	1 cut(s)	303
BsaXI	ACNNNNNCTCC	2 cut(s)	950, 980
Bsc4I	CCNNNNNNNGG	2 cut(s)	640, 710
Bse1I	ACTGG	1 cut(s)	964
BseBI	CCWGG	1 cut(s)	531
BseDI	CCNNGG	1 cut(s)	303
BseGI	GGATG	4 cut(s)	222, 283, 295, 526
BseLI	CCNNNNNNNGG	2 cut(s)	640, 710
BseMII	CTCAG	2 cut(s)	60, 200
BseNI	ACTGG	1 cut(s)	964
BseRI	GAGGAG	1 cut(s)	119
BseSI	GKGCMC	3 cut(s)	182, 506, 666
BseXI	GCAGC	2 cut(s)	283, 347
BshFI	GGCC	2 cut(s)	302, 819
BsiHKAI	GWGCWC	3 cut(s)	182, 447, 963
BslFI	GGGAC	1 cut(s)	93
BslI	CCNNNNNNNGG	2 cut(s)	640, 710
BsmAI	GTCTC	3 cut(s)	44, 129, 413
BsmBI	CGTCTC	1 cut(s)	44
BsmFI	GGGAC	1 cut(s)	93
BsnI	GGCC	2 cut(s)	302, 819
Bso31I	GGTCTC	1 cut(s)	413
Bsp1286I	GDGCHC	5 cut(s)	182, 447, 506, 666, 963
Bsp143I	GATC	3 cut(s)	280, 315, 364
BspACI	CCGC	4 cut(s)	156, 299, 323, 609
BspANI	GGCC	2 cut(s)	302, 819
BspCNI	CTCAG	2 cut(s)	59, 201
BspLI	GGNNCC	4 cut(s)	6, 570, 607, 943
BspMI	ACCTGC	1 cut(s)	191
BspPI	GGATC	1 cut(s)	359
BspTI	CTTAAG	1 cut(s)	635
BspTNI	GGTCTC	1 cut(s)	413
BsrI	ACTGG	1 cut(s)	964
BssECI	CCNNGG	1 cut(s)	303
BssMI	GATC	3 cut(s)	280, 315, 364
BssNI	GRCGYC	1 cut(s)	240
BssSI	CACGAG	1 cut(s)	495
BssT1I	CCWWGG	1 cut(s)	303
Bst2BI	CACGAG	1 cut(s)	495
Bst2UI	CCWGG	1 cut(s)	531
Bst4CI	ACNGT	3 cut(s)	22, 87, 668
Bst6I	CTCTTC	3 cut(s)	108, 137, 143
BstACI	GRCGYC	1 cut(s)	240
BstAFI	CTTAAG	1 cut(s)	635
BstBAI	YACGTR	1 cut(s)	514
BstC8I	GCNNGC	1 cut(s)	447
BstDEI	CTNAG	2 cut(s)	46, 209
BstF5I	GGATG	4 cut(s)	222, 283, 295, 526
BstKTI	GATC	3 cut(s)	283, 318, 367
BstMAI	GTCTC	3 cut(s)	44, 129, 413
BstMBI	GATC	3 cut(s)	280, 315, 364
BstMWI	GCNNNNNNNGC	4 cut(s)	74, 164, 248, 958
BstNI	CCWGG	1 cut(s)	531
BstNSI	RCATGY	1 cut(s)	675
BstSCI	CCNGG	1 cut(s)	529
BstSFI	CTRYAG	1 cut(s)	18
BstSLI	GKGCMC	3 cut(s)	182, 506, 666
BstV1I	GCAGC	2 cut(s)	283, 347
BstV2I	GAAGAC	2 cut(s)	243, 813
BsuRI	GGCC	2 cut(s)	302, 819
BtgZI	GCGATG	1 cut(s)	101
BtsCI	GGATG	4 cut(s)	222, 283, 295, 526
BtsI	GCAGTG	1 cut(s)	843
BtsIMutI	CAGTG	2 cut(s)	673, 843
BveI	ACCTGC	1 cut(s)	191
Cac8I	GCNNGC	1 cut(s)	447
Cfr13I	GGNCC	1 cut(s)	4
CseI	GACGC	1 cut(s)	248
Csp6I	GTAC	2 cut(s)	469, 515
CviAII	CATG	2 cut(s)	472, 672
CviQI	GTAC	2 cut(s)	469, 515
DdeI	CTNAG	2 cut(s)	46, 209
DpnI	GATC	3 cut(s)	282, 317, 366
DpnII	GATC	3 cut(s)	280, 315, 364
EaeI	YGGCCR	2 cut(s)	300, 817
Eam1104I	CTCTTC	3 cut(s)	108, 137, 143
EarI	CTCTTC	3 cut(s)	108, 137, 143
EciI	GGCGGA	1 cut(s)	338
Ecl136II	GAGCTC	2 cut(s)	445, 961
Eco130I	CCWWGG	1 cut(s)	303
Eco24I	GRGCYC	2 cut(s)	447, 963
Eco31I	GGTCTC	1 cut(s)	413
Eco47I	GGWCC	1 cut(s)	4
Eco53kI	GAGCTC	2 cut(s)	445, 961
Eco57I	CTGAAG	3 cut(s)	172, 305, 314
EcoICRI	GAGCTC	2 cut(s)	445, 961
EcoRII	CCWGG	1 cut(s)	529
EcoT14I	CCWWGG	1 cut(s)	303
EcoT38I	GRGCYC	2 cut(s)	447, 963
ErhI	CCWWGG	1 cut(s)	303
Esp3I	CGTCTC	1 cut(s)	44
FaeI	CATG	2 cut(s)	475, 675
FalI	AAGNNNNNCTT	4 cut(s)	374, 406, 888, 920
FaqI	GGGAC	1 cut(s)	93
FatI	CATG	2 cut(s)	471, 671
FauNDI	CATATG	1 cut(s)	232
Fnu4HI	GCNGC	4 cut(s)	297, 300, 336, 609
FokI	GGATG	4 cut(s)	229, 290, 302, 513
FriOI	GRGCYC	2 cut(s)	447, 963
Fsp4HI	GCNGC	4 cut(s)	297, 300, 336, 609
FspBI	CTAG	2 cut(s)	518, 851
GluI	GCNGC	4 cut(s)	297, 300, 336, 609
GsuI	CTGGAG	2 cut(s)	552, 947
HaeIII	GGCC	2 cut(s)	302, 819
HgaI	GACGC	1 cut(s)	248
Hin1I	GRCGYC	1 cut(s)	240
Hin1II	CATG	2 cut(s)	475, 675
HindIII	AAGCTT	1 cut(s)	260
HinfI	GANTC	4 cut(s)	44, 55, 227, 491
HphI	GGTGA	4 cut(s)	319, 388, 452, 667
Hpy166II	GTNNAC	2 cut(s)	180, 758
Hpy188I	TCNGA	5 cut(s)	43, 49, 285, 349, 490
Hpy188III	TCNNGA	5 cut(s)	27, 256, 403, 495, 707
Hpy8I	GTNNAC	2 cut(s)	180, 758
Hpy99I	CGWCG	1 cut(s)	374
HpyCH4III	ACNGT	3 cut(s)	22, 87, 668
HpyCH4IV	ACGT	1 cut(s)	513
HpyCH4V	TGCA	4 cut(s)	180, 596, 631, 671
HpyF10VI	GCNNNNNNNGC	4 cut(s)	74, 164, 248, 958
HpyF3I	CTNAG	2 cut(s)	46, 209
HpySE526I	ACGT	1 cut(s)	513
Hsp92I	GRCGYC	1 cut(s)	240
Hsp92II	CATG	2 cut(s)	475, 675
Kzo9I	GATC	3 cut(s)	280, 315, 364
LmnI	GCTCC	6 cut(s)	164, 325, 605, 947, 958, 966
LpnPI	CCDG	9 cut(s)	134, 196, 317, 441, 516, 543, 582, 774, 977
Lsp1109I	GCAGC	2 cut(s)	283, 347
LweI	GCATC	3 cut(s)	526, 690, 812
MaeI	CTAG	2 cut(s)	518, 851
MaeII	ACGT	1 cut(s)	513
MaeIII	GTNAC	2 cut(s)	394, 846
MalI	GATC	3 cut(s)	282, 317, 366
MboI	GATC	3 cut(s)	280, 315, 364
MboII	GAAGA	7 cut(s)	95, 124, 130, 248, 322, 325, 818
MhlI	GDGCHC	5 cut(s)	182, 447, 506, 666, 963
MluCI	AATT	2 cut(s)	378, 972
MlyI	GAGTC	3 cut(s)	38, 49, 485
MmeI	TCCRAC	1 cut(s)	583
MnlI	CCTC	9 cut(s)	121, 140, 146, 349, 582, 714, 730, 826, 911
MseI	TTAA	3 cut(s)	381, 636, 936
MslI	CAYNNNNRTG	2 cut(s)	499, 653
MspCI	CTTAAG	1 cut(s)	635
MspR9I	CCNGG	1 cut(s)	531
MvaI	CCWGG	1 cut(s)	531
MwoI	GCNNNNNNNGC	4 cut(s)	74, 164, 248, 958
NdeI	CATATG	1 cut(s)	232
NdeII	GATC	3 cut(s)	280, 315, 364
NlaIII	CATG	2 cut(s)	475, 675
NlaIV	GGNNCC	4 cut(s)	6, 570, 607, 943
NmuCI	GTSAC	2 cut(s)	394, 846
NspI	RCATGY	1 cut(s)	675
OliI	CACNNNNGTG	1 cut(s)	499
PaqCI	CACCTGC	1 cut(s)	191
PfeI	GAWTC	1 cut(s)	227
PflFI	GACNNNGTC	1 cut(s)	584
PfoI	TCCNGGA	1 cut(s)	529
PkrI	GCNGC	4 cut(s)	298, 301, 337, 610
PleI	GAGTC	3 cut(s)	38, 49, 485
PpsI	GAGTC	3 cut(s)	38, 49, 485
Ppu21I	YACGTR	1 cut(s)	514
Psp124BI	GAGCTC	2 cut(s)	447, 963
Psp6I	CCWGG	1 cut(s)	529
PspGI	CCWGG	1 cut(s)	529
PspN4I	GGNNCC	4 cut(s)	6, 570, 607, 943
PspPI	GGNCC	1 cut(s)	4
PsyI	GACNNNGTC	1 cut(s)	584
RsaI	GTAC	2 cut(s)	470, 516
RsaNI	GTAC	2 cut(s)	469, 515
RseI	CAYNNNNRTG	2 cut(s)	499, 653
SacI	GAGCTC	2 cut(s)	447, 963
SaqAI	TTAA	3 cut(s)	381, 636, 936
SatI	GCNGC	4 cut(s)	297, 300, 336, 609
Sau3AI	GATC	3 cut(s)	280, 315, 364
Sau96I	GGNCC	1 cut(s)	4
SchI	GAGTC	3 cut(s)	38, 49, 485
ScrFI	CCNGG	1 cut(s)	531
SduI	GDGCHC	5 cut(s)	182, 447, 506, 666, 963
SfaNI	GCATC	3 cut(s)	526, 690, 812
SfcI	CTRYAG	1 cut(s)	18
SinI	GGWCC	1 cut(s)	4
SmiMI	CAYNNNNRTG	2 cut(s)	499, 653
SmlI	CTYRAG	2 cut(s)	254, 635
SmoI	CTYRAG	2 cut(s)	254, 635
Sse9I	AATT	2 cut(s)	378, 972
SsiI	CCGC	4 cut(s)	156, 299, 323, 609
SspMI	CTAG	2 cut(s)	518, 851
SstI	GAGCTC	2 cut(s)	447, 963
StyD4I	CCNGG	1 cut(s)	529
StyI	CCWWGG	1 cut(s)	303
TaaI	ACNGT	3 cut(s)	22, 87, 668
TaiI	ACGT	1 cut(s)	516
TaqI	TCGA	3 cut(s)	28, 246, 372
TasI	AATT	2 cut(s)	378, 972
TatI	WGTACW	1 cut(s)	468
TauI	GCSGC	2 cut(s)	302, 611
TfiI	GAWTC	1 cut(s)	227
Tru1I	TTAA	3 cut(s)	381, 636, 936
Tru9I	TTAA	3 cut(s)	381, 636, 936
TscAI	CASTG	2 cut(s)	673, 843
TseFI	GTSAC	2 cut(s)	394, 846
TseI	GCWGC	2 cut(s)	296, 335
Tsp45I	GTSAC	2 cut(s)	394, 846
TspDTI	ATGAA	3 cut(s)	249, 721, 974
TspGWI	ACGGA	2 cut(s)	177, 726
TspRI	CASTG	2 cut(s)	673, 843
Tth111I	GACNNNGTC	1 cut(s)	584
Vha464I	CTTAAG	1 cut(s)	635
VneI	GTGCAC	1 cut(s)	178
VpaK11BI	GGWCC	1 cut(s)	4
XapI	RAATTY	1 cut(s)	972
XceI	RCATGY	1 cut(s)	675
XspI	CTAG	2 cut(s)	518, 851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.