Prupe.8G025400_v2.0.a1

Reversible hydration of carbon dioxide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000548
Physical Location & Seq
Reverse (-)
2320388 .. 2324020
3633 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G025400.1

Sequence Viewer

Length: 768 bp
ATGGCTAGCCAATTGGCCCTCCAACGACTCAAGAATCTCCTCAGTGAGAAGGGAGAGCTGGACGATGTGGCTGCTGCCAAAATTGAGAAGTTGACGGCTGAGTTGGAAAAACCTGGTGATTTTAACCCAGTTCAAAGAATTGTGGATGGCTTCATCCACTTCAGGACCAACAAATTCGAAAAATATCCGGACTGTTTCAATGAGCTTGCTGAAGGACAAAGCCCCAAGTTTCTGGTATTTGCATGCTCGGACTCCCGAGTAAGCCCCTCTCATATCCTTAATTTCCAACCTGGGGAGGCCTTCATGGTTCGCAACATTGCTAACATGGTTCCTGCTTTTAACCAGATAAAATACGTAGGGGTTGGAGCGGCCATTGAATATGCTATAACAGCACTTGGGGTAGAAAACATTTTGGTCATTGGACACAGTCGTTGTGGAGGGATCAAGAGGCTTATGACTCATCCAGAGGATGGTTCTGTTCCCTTTGACTTCATAGATGAATGGGTTAAAATTGGTCTACCAGCCAAGGTTAAGGTTATAGCAAATGGACTGGGTGGGCATGATATTGATGAACAATGTGAAGCTTGTGCAAGGGAATCAGTAAATTTATCACTGGTAAACCTGCAAAGTTATCCATACGTTCAAAAGGCGATTTCTAACAGAAATCTAGCACTCCGGGGTGGTTACTATGACTTTGTCCGTGGAGTTTTCGAGCTCTGGGAGCTTGAATCACACATTTCACCCCCCATCATTATTCCAGCACCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00910 map00910
Pfam Domains
Protein Families
Pro_CA

Protein Analysis

256

Amino Acids

28.22

Weight (kDa)

5.57

Isoelectric Point (pI)

51.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000548)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G01500 AT3G01500 AT3G01500 AT3G01500 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740
fragaria_vesca FvH4_2g14190 FvH4_3g35690 FvH4_3g35690 FvH4_6g50780 FvH4_6g50780 FvH4_6g50780 FvH4_6g50780
malus_domestica MD09G1032400.v1.1 MD10G1022000.v1.1 MD10G1022200.v1.1 MD10G1022400.v1.1 MD17G1034000.v1.1
prunus_persica Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.6G080400_v2.0.a1 Prupe.8G025400_v2.0.a1
pyrus_communis pycom10g01540 pycom111g02580 pycom17g03140
rosa_chinensis RchiOBHm_Chr2g0172091 RchiOBHm_Chr2g0172171 RchiOBHm_Chr5g0063841 RchiOBHm_Chr5g0063851 RchiOBHm_Chr6g0276331
rosa_laevigata RLG00000013403 RLG00000022084 RLG00000022089 RLG00000035683 RLG00000035684
rosa_multiflora Rmu_co8246953.1_g000001 Rmu_sc0002765.1_g000009 Rmu_sc0002765.1_g000011 Rmu_sc0003665.1_g000009 Rmu_ssc0000252.1_g000041 Rmu_ssc0000252.1_g000047
rosa_roxburghii Rroxscaffold_1G00016930 Rroxscaffold_2G00080110 Rroxscaffold_7G00192380
rosa_rugosa Rorug02G0556500 Rorug02G0556600 Rorug02G0556700 Rorug02G0556800 Rorug05G0360800 Rorug06G0100000 Rorug06G0100000
rosa_samantha Rh2AG632300 Rh2BG642200 Rh2BG645900 Rh2CG612500 Rh2DG653300 Rh2DG660500 Rh5AG418900 Rh5AG419000 Rh5BG435100 Rh5BG435200 Rh5CG458100 Rh5CG458200 Rh5DG447900 Rh5DG448000 Rh6AG211200 Rh6CG217900 Rh6DG208000
rosa_wichuraiana Rw2G052340 Rw5G039370 Rw5G039380 Rw6G018450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 630
AccB7I CCANNNNNTGG 1 cut(s) 470
AccBSI CCGCTC 1 cut(s) 368
AccI GTMKAC 1 cut(s) 517
AccIII TCCGGA 1 cut(s) 187
AciI CCGC 1 cut(s) 368
AclWI GGATC 1 cut(s) 449
AcoI YGGCCR 1 cut(s) 369
AcsI RAATTY 2 cut(s) 173, 604
AcuI CTGAAG 2 cut(s) 145, 231
AfiI CCNNNNNNNGG 2 cut(s) 292, 470
AgsI TTSAA 5 cut(s) 134, 199, 377, 644, 728
AjnI CCWGG 2 cut(s) 112, 289
AluBI AGCT 5 cut(s) 58, 205, 584, 715, 724
AluI AGCT 5 cut(s) 58, 205, 584, 715, 724
Alw21I GWGCWC 1 cut(s) 717
AlwI GGATC 1 cut(s) 449
Ama87I CYCGRG 1 cut(s) 255
Aor13HI TCCGGA 1 cut(s) 187
AoxI GGCC 3 cut(s) 15, 297, 369
ApeKI GCWGC 2 cut(s) 71, 74
ApoI RAATTY 2 cut(s) 173, 604
AspS9I GGNCC 2 cut(s) 16, 165
AsuC2I CCSGG 1 cut(s) 677
AsuHPI GGTGA 2 cut(s) 128, 732
AsuII TTCGAA 1 cut(s) 177
AsuNHI GCTAGC 1 cut(s) 5
AvaI CYCGRG 1 cut(s) 255
AvaII GGWCC 1 cut(s) 165
BanII GRGCYC 1 cut(s) 717
Bbv12I GWGCWC 1 cut(s) 717
BbvI GCAGC 2 cut(s) 58, 61
BccI CCATC 3 cut(s) 140, 464, 755
BceAI ACGGC 1 cut(s) 111
BcgI CGANNNNNNTGC 2 cut(s) 53, 87
BciT130I CCWGG 2 cut(s) 114, 291
BcnI CCSGG 1 cut(s) 677
BfaI CTAG 2 cut(s) 6, 668
BfuAI ACCTGC 1 cut(s) 630
BisI GCNGC 3 cut(s) 72, 75, 369
BlsI GCNGC 3 cut(s) 73, 76, 370
Bme1390I CCNGG 3 cut(s) 114, 291, 677
Bme18I GGWCC 1 cut(s) 165
BmeT110I CYCGRG 1 cut(s) 255
BmgT120I GGNCC 2 cut(s) 16, 165
BmiI GGNNCC 1 cut(s) 330
BmrFI CCNGG 3 cut(s) 114, 291, 677
BmrI ACTGGG 2 cut(s) 122, 560
BmtI GCTAGC 1 cut(s) 9
BmuI ACTGGG 2 cut(s) 122, 560
Bpu14I TTCGAA 1 cut(s) 177
BpuEI CTTGAG 1 cut(s) 14
BpuMI CCSGG 1 cut(s) 677
BsaAI YACGTR 1 cut(s) 355
BsaJI CCNNGG 4 cut(s) 290, 525, 676, 700
BsaWI WCCGGW 1 cut(s) 187
Bsc4I CCNNNNNNNGG 2 cut(s) 292, 470
Bse1I ACTGG 3 cut(s) 128, 555, 618
Bse3DI GCAATG 1 cut(s) 315
BseAI TCCGGA 1 cut(s) 187
BseBI CCWGG 2 cut(s) 114, 291
BseDI CCNNGG 4 cut(s) 290, 525, 676, 700
BseGI GGATG 4 cut(s) 151, 153, 460, 475
BseLI CCNNNNNNNGG 2 cut(s) 292, 470
BseMI GCAATG 1 cut(s) 315
BseMII CTCAG 2 cut(s) 55, 90
BseNI ACTGG 3 cut(s) 128, 555, 618
BseRI GAGGAG 1 cut(s) 29
BseXI GCAGC 2 cut(s) 58, 61
BshFI GGCC 3 cut(s) 17, 299, 371
BsiHKAI GWGCWC 1 cut(s) 717
BsiHKCI CYCGRG 1 cut(s) 255
BsiSI CCGG 2 cut(s) 188, 676
BslI CCNNNNNNNGG 2 cut(s) 292, 470
BsnI GGCC 3 cut(s) 17, 299, 371
BsoBI CYCGRG 1 cut(s) 255
Bsp119I TTCGAA 1 cut(s) 177
Bsp1286I GDGCHC 1 cut(s) 717
Bsp13I TCCGGA 1 cut(s) 187
Bsp143I GATC 1 cut(s) 441
BspACI CCGC 1 cut(s) 368
BspANI GGCC 3 cut(s) 17, 299, 371
BspCNI CTCAG 2 cut(s) 54, 91
BspEI TCCGGA 1 cut(s) 187
BspLI GGNNCC 1 cut(s) 330
BspMI ACCTGC 1 cut(s) 630
BspOI GCTAGC 1 cut(s) 9
BspPI GGATC 1 cut(s) 449
BspT104I TTCGAA 1 cut(s) 177
BsrBI CCGCTC 1 cut(s) 368
BsrDI GCAATG 1 cut(s) 315
BsrI ACTGG 3 cut(s) 128, 555, 618
BssECI CCNNGG 4 cut(s) 290, 525, 676, 700
BssMI GATC 1 cut(s) 441
BssT1I CCWWGG 1 cut(s) 525
Bst2UI CCWGG 2 cut(s) 114, 291
Bst4CI ACNGT 2 cut(s) 194, 428
BstBAI YACGTR 1 cut(s) 355
BstBI TTCGAA 1 cut(s) 177
BstC8I GCNNGC 3 cut(s) 7, 207, 244
BstDEI CTNAG 2 cut(s) 41, 99
BstDSI CCRYGG 1 cut(s) 700
BstF5I GGATG 4 cut(s) 151, 153, 460, 475
BstKTI GATC 1 cut(s) 444
BstMBI GATC 1 cut(s) 441
BstMWI GCNNNNNNNGC 2 cut(s) 389, 721
BstNI CCWGG 2 cut(s) 114, 291
BstNSI RCATGY 1 cut(s) 246
BstSCI CCNGG 3 cut(s) 112, 289, 675
BstSNI TACGTA 1 cut(s) 355
BstV1I GCAGC 2 cut(s) 58, 61
BstXI CCANNNNNNTGG 1 cut(s) 232
BsuRI GGCC 3 cut(s) 17, 299, 371
BtgI CCRYGG 1 cut(s) 700
BtsCI GGATG 4 cut(s) 151, 153, 460, 475
BtsIMutI CAGTG 2 cut(s) 49, 611
BveI ACCTGC 1 cut(s) 630
Cac8I GCNNGC 3 cut(s) 7, 207, 244
Cfr13I GGNCC 2 cut(s) 16, 165
CsiI ACCWGGT 1 cut(s) 112
CviAII CATG 4 cut(s) 243, 304, 325, 560
DdeI CTNAG 2 cut(s) 41, 99
DpnI GATC 1 cut(s) 443
DpnII GATC 1 cut(s) 441
EaeI YGGCCR 1 cut(s) 369
Ecl136II GAGCTC 1 cut(s) 715
Eco105I TACGTA 1 cut(s) 355
Eco130I CCWWGG 1 cut(s) 525
Eco147I AGGCCT 1 cut(s) 299
Eco24I GRGCYC 1 cut(s) 717
Eco47I GGWCC 1 cut(s) 165
Eco53kI GAGCTC 1 cut(s) 715
Eco57I CTGAAG 2 cut(s) 145, 231
Eco88I CYCGRG 1 cut(s) 255
EcoICRI GAGCTC 1 cut(s) 715
EcoRII CCWGG 2 cut(s) 112, 289
EcoT14I CCWWGG 1 cut(s) 525
EcoT38I GRGCYC 1 cut(s) 717
ErhI CCWWGG 1 cut(s) 525
FaeI CATG 4 cut(s) 246, 307, 328, 563
FatI CATG 4 cut(s) 242, 303, 324, 559
FblI GTMKAC 1 cut(s) 517
Fnu4HI GCNGC 3 cut(s) 72, 75, 369
FokI GGATG 4 cut(s) 140, 158, 447, 482
FriOI GRGCYC 1 cut(s) 717
Fsp4HI GCNGC 3 cut(s) 72, 75, 369
FspBI CTAG 2 cut(s) 6, 668
GluI GCNGC 3 cut(s) 72, 75, 369
HaeIII GGCC 3 cut(s) 17, 299, 371
HapII CCGG 2 cut(s) 188, 676
Hin1II CATG 4 cut(s) 246, 307, 328, 563
HincII GTYRAC 1 cut(s) 93
HindII GTYRAC 1 cut(s) 93
HindIII AAGCTT 1 cut(s) 582
HinfI GANTC 6 cut(s) 27, 34, 251, 457, 596, 728
HpaII CCGG 2 cut(s) 188, 676
HphI GGTGA 2 cut(s) 128, 732
Hpy166II GTNNAC 3 cut(s) 93, 518, 619
Hpy188I TCNGA 1 cut(s) 250
Hpy188III TCNNGA 6 cut(s) 31, 163, 188, 255, 445, 464
Hpy8I GTNNAC 3 cut(s) 93, 518, 619
HpyAV CCTTC 3 cut(s) 43, 206, 310
HpyCH4III ACNGT 2 cut(s) 194, 428
HpyCH4IV ACGT 2 cut(s) 354, 639
HpyCH4V TGCA 3 cut(s) 242, 590, 625
HpyF10VI GCNNNNNNNGC 2 cut(s) 389, 721
HpyF3I CTNAG 2 cut(s) 41, 99
HpySE526I ACGT 2 cut(s) 354, 639
Hsp92II CATG 4 cut(s) 246, 307, 328, 563
Kpn2I TCCGGA 1 cut(s) 187
Kzo9I GATC 1 cut(s) 441
LmnI GCTCC 2 cut(s) 365, 721
Lsp1109I GCAGC 2 cut(s) 58, 61
MabI ACCWGGT 1 cut(s) 112
MaeI CTAG 2 cut(s) 6, 668
MaeII ACGT 2 cut(s) 354, 639
MaeIII GTNAC 1 cut(s) 683
MalI GATC 1 cut(s) 443
MbiI CCGCTC 1 cut(s) 368
MboI GATC 1 cut(s) 441
MfeI CAATTG 1 cut(s) 11
MhlI GDGCHC 1 cut(s) 717
MluCI AATT 7 cut(s) 11, 81, 138, 173, 280, 510, 604
MlyI GAGTC 3 cut(s) 21, 245, 451
MmeI TCCRAC 4 cut(s) 46, 84, 310, 343
MnlI CCTC 7 cut(s) 29, 50, 277, 289, 431, 441, 460
MroI TCCGGA 1 cut(s) 187
MseI TTAA 6 cut(s) 123, 279, 339, 507, 531, 766
MspI CCGG 2 cut(s) 188, 676
MspR9I CCNGG 3 cut(s) 114, 291, 677
MunI CAATTG 1 cut(s) 11
MvaI CCWGG 2 cut(s) 114, 291
MwoI GCNNNNNNNGC 2 cut(s) 389, 721
NciI CCSGG 1 cut(s) 677
NdeII GATC 1 cut(s) 441
NheI GCTAGC 1 cut(s) 5
NlaIII CATG 4 cut(s) 246, 307, 328, 563
NlaIV GGNNCC 1 cut(s) 330
NspI RCATGY 1 cut(s) 246
NspV TTCGAA 1 cut(s) 177
PaeI GCATGC 1 cut(s) 246
PceI AGGCCT 1 cut(s) 299
PfeI GAWTC 3 cut(s) 34, 596, 728
PflFI GACNNNGTC 2 cut(s) 426, 695
PflMI CCANNNNNTGG 1 cut(s) 470
PkrI GCNGC 3 cut(s) 73, 76, 370
PleI GAGTC 3 cut(s) 21, 245, 451
PpsI GAGTC 3 cut(s) 21, 245, 451
Ppu21I YACGTR 1 cut(s) 355
Psp124BI GAGCTC 1 cut(s) 717
Psp6I CCWGG 2 cut(s) 112, 289
PspGI CCWGG 2 cut(s) 112, 289
PspN4I GGNNCC 1 cut(s) 330
PspPI GGNCC 2 cut(s) 16, 165
PsyI GACNNNGTC 2 cut(s) 426, 695
SacI GAGCTC 1 cut(s) 717
SaqAI TTAA 6 cut(s) 123, 279, 339, 507, 531, 766
SatI GCNGC 3 cut(s) 72, 75, 369
Sau3AI GATC 1 cut(s) 441
Sau96I GGNCC 2 cut(s) 16, 165
SchI GAGTC 3 cut(s) 21, 245, 451
ScrFI CCNGG 3 cut(s) 114, 291, 677
SduI GDGCHC 1 cut(s) 717
SexAI ACCWGGT 1 cut(s) 112
SfuI TTCGAA 1 cut(s) 177
SinI GGWCC 1 cut(s) 165
SmlI CTYRAG 1 cut(s) 29
SmoI CTYRAG 1 cut(s) 29
SnaBI TACGTA 1 cut(s) 355
SphI GCATGC 1 cut(s) 246
Sse9I AATT 7 cut(s) 11, 81, 138, 173, 280, 510, 604
SseBI AGGCCT 1 cut(s) 299
SsiI CCGC 1 cut(s) 368
SspMI CTAG 2 cut(s) 6, 668
SstI GAGCTC 1 cut(s) 717
StuI AGGCCT 1 cut(s) 299
StyD4I CCNGG 3 cut(s) 112, 289, 675
StyI CCWWGG 1 cut(s) 525
TaaI ACNGT 2 cut(s) 194, 428
TaiI ACGT 2 cut(s) 357, 642
TaqI TCGA 2 cut(s) 177, 711
TasI AATT 7 cut(s) 11, 81, 138, 173, 280, 510, 604
TauI GCSGC 1 cut(s) 371
TfiI GAWTC 3 cut(s) 34, 596, 728
Tru1I TTAA 6 cut(s) 123, 279, 339, 507, 531, 766
Tru9I TTAA 6 cut(s) 123, 279, 339, 507, 531, 766
TscAI CASTG 2 cut(s) 49, 618
TseI GCWGC 2 cut(s) 71, 74
TspDTI ATGAA 5 cut(s) 142, 292, 481, 513, 585
TspGWI ACGGA 1 cut(s) 689
TspRI CASTG 2 cut(s) 49, 618
Tth111I GACNNNGTC 2 cut(s) 426, 695
Van91I CCANNNNNTGG 1 cut(s) 470
VpaK11BI GGWCC 1 cut(s) 165
XapI RAATTY 2 cut(s) 173, 604
XceI RCATGY 1 cut(s) 246
XmiI GTMKAC 1 cut(s) 517
XspI CTAG 2 cut(s) 6, 668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.