Prupe.6G080400_v2.0.a1

Reversible hydration of carbon dioxide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000548
Physical Location & Seq
Forward (+)
5472643 .. 5474647
2005 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G080400.1

Sequence Viewer

Length: 828 bp
ATGACTACTAGCCAGTTATCTGATGCTGCCATTCAAAATCTCTTGAAGTTGTTTCTCAGTGAGAAGGAAGAGTACCTGGACGATGTGGCTGCAGCCAAGATTGATAACATAACCGTTGAGATGCAATGGACCGGGCAGACCGGACCGGCTTGGCCACCCAGACCGCTCGGTTCTTCAGATGACCCAGTTAAAAGAATTATAGATGGGTTCAAGTACTTCAAGACCAACTATTTCGACAAACATCCACATTTGGTAAAGGAGCTGGCCCAAGAACAAAGCCCCAAGTTTATGGTATTTGCATGCTCAGACTCCCGAGTGTGCCCCTCGCATATCCTTCATTTCCAACCTGGGGAAGCCTTCATGGTTCGCAATATCGCCAACATGGTTCCTGCCTTTGACCAGCTGAAACACACAGGAGTTGGAGCAACCATAGAATATGCTATTGAAGAACTAGGGGTAGAAAATATTTTGGTCATGGGACATAGTCGTTGTGGCGGGATCAAGAGGCTGATGTCTCATCCAGAAAATGGTTCTACTCCCTTTGACTTTATAGATGAATGGATGAAAATTGGTTTACCTGCCAAGGCTAAGGTTATAGCAGAAGCAGAGGGTGGAAGTGCAGATTTTGAAGAACAATGTGAAAGTTGTGCAAGGGAAGCAGTAAATTTGTCACTGAGAAACCTACAAACTTACCCATATGTTCAGAAGGCAGTCTCAGACAAAACCCTAGCACTGAGGGGTGGCTACTATGACTTTGTAAATGGAATTTTTGAGCTTTGGGAGCTTCAGTCCACCATTTCAGACCCAATCATCATTCAATCTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00910 map00910
Pfam Domains
Protein Families
Pro_CA

Protein Analysis

276

Amino Acids

30.7

Weight (kDa)

5.05

Isoelectric Point (pI)

53.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000548)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G01500 AT3G01500 AT3G01500 AT3G01500 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740
fragaria_vesca FvH4_2g14190 FvH4_3g35690 FvH4_3g35690 FvH4_6g50780 FvH4_6g50780 FvH4_6g50780 FvH4_6g50780
malus_domestica MD09G1032400.v1.1 MD10G1022000.v1.1 MD10G1022200.v1.1 MD10G1022400.v1.1 MD17G1034000.v1.1
prunus_persica Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.6G080400_v2.0.a1 Prupe.8G025400_v2.0.a1
pyrus_communis pycom10g01540 pycom111g02580 pycom17g03140
rosa_chinensis RchiOBHm_Chr2g0172091 RchiOBHm_Chr2g0172171 RchiOBHm_Chr5g0063841 RchiOBHm_Chr5g0063851 RchiOBHm_Chr6g0276331
rosa_laevigata RLG00000013403 RLG00000022084 RLG00000022089 RLG00000035683 RLG00000035684
rosa_multiflora Rmu_co8246953.1_g000001 Rmu_sc0002765.1_g000009 Rmu_sc0002765.1_g000011 Rmu_sc0003665.1_g000009 Rmu_ssc0000252.1_g000041 Rmu_ssc0000252.1_g000047
rosa_roxburghii Rroxscaffold_1G00016930 Rroxscaffold_2G00080110 Rroxscaffold_7G00192380
rosa_rugosa Rorug02G0556500 Rorug02G0556600 Rorug02G0556700 Rorug02G0556800 Rorug05G0360800 Rorug06G0100000 Rorug06G0100000
rosa_samantha Rh2AG632300 Rh2BG642200 Rh2BG645900 Rh2CG612500 Rh2DG653300 Rh2DG660500 Rh5AG418900 Rh5AG419000 Rh5BG435100 Rh5BG435200 Rh5CG458100 Rh5CG458200 Rh5DG447900 Rh5DG448000 Rh6AG211200 Rh6CG217900 Rh6DG208000
rosa_wichuraiana Rw2G052340 Rw5G039370 Rw5G039380 Rw6G018450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 586
AccB7I CCANNNNNTGG 1 cut(s) 527
AccBSI CCGCTC 1 cut(s) 166
AciI CCGC 2 cut(s) 164, 495
AclWI GGATC 1 cut(s) 506
AcoI YGGCCR 1 cut(s) 152
AcsI RAATTY 2 cut(s) 664, 765
AcuI CTGAAG 2 cut(s) 159, 770
AfaI GTAC 2 cut(s) 74, 215
AfiI CCNNNNNNNGG 2 cut(s) 349, 527
AgsI TTSAA 7 cut(s) 35, 46, 211, 220, 446, 629, 818
AjnI CCWGG 2 cut(s) 75, 346
AluBI AGCT 4 cut(s) 262, 403, 775, 784
AluI AGCT 4 cut(s) 262, 403, 775, 784
Alw26I GTCTC 2 cut(s) 519, 718
AlwI GGATC 1 cut(s) 506
Ama87I CYCGRG 1 cut(s) 312
AoxI GGCC 2 cut(s) 152, 264
ApeKI GCWGC 3 cut(s) 26, 89, 92
ApoI RAATTY 2 cut(s) 664, 765
AspS9I GGNCC 3 cut(s) 129, 143, 265
AsuC2I CCSGG 1 cut(s) 133
AvaI CYCGRG 1 cut(s) 312
AvaII GGWCC 2 cut(s) 129, 143
BaeGI GKGCMC 1 cut(s) 323
BalI TGGCCA 1 cut(s) 154
BarI GAAGNNNNNNTAC 2 cut(s) 56, 88
BbvI GCAGC 3 cut(s) 13, 76, 104
BccI CCATC 1 cut(s) 197
BcgI CGANNNNNNTGC 2 cut(s) 71, 105
BciT130I CCWGG 2 cut(s) 77, 348
BcnI CCSGG 1 cut(s) 133
BcoDI GTCTC 2 cut(s) 519, 718
BfaI CTAG 3 cut(s) 9, 452, 728
BfmI CTRYAG 1 cut(s) 90
BfuAI ACCTGC 1 cut(s) 586
BisI GCNGC 3 cut(s) 27, 90, 93
BlsI GCNGC 3 cut(s) 28, 91, 94
BmcAI AGTACT 1 cut(s) 215
Bme1390I CCNGG 3 cut(s) 77, 133, 348
Bme18I GGWCC 2 cut(s) 129, 143
BmeT110I CYCGRG 1 cut(s) 312
BmgT120I GGNCC 3 cut(s) 129, 143, 265
BmiI GGNNCC 1 cut(s) 387
BmrFI CCNGG 3 cut(s) 77, 133, 348
BmrI ACTGGG 1 cut(s) 179
BmsI GCATC 2 cut(s) 13, 111
BmuI ACTGGG 1 cut(s) 179
Bpu10I CCTNAGC 1 cut(s) 588
BpuMI CCSGG 1 cut(s) 133
BsaJI CCNNGG 2 cut(s) 347, 582
BsaWI WCCGGW 1 cut(s) 140
BsaXI ACNNNNNCTCC 2 cut(s) 773, 803
Bsc4I CCNNNNNNNGG 2 cut(s) 349, 527
Bse118I RCCGGY 1 cut(s) 145
Bse1I ACTGG 2 cut(s) 13, 185
Bse3DI GCAATG 1 cut(s) 131
BseBI CCWGG 2 cut(s) 77, 348
BseDI CCNNGG 2 cut(s) 347, 582
BseGI GGATG 3 cut(s) 241, 517, 567
BseLI CCNNNNNNNGG 2 cut(s) 349, 527
BseMI GCAATG 1 cut(s) 131
BseMII CTCAG 5 cut(s) 70, 318, 665, 725, 729
BseNI ACTGG 2 cut(s) 13, 185
BseSI GKGCMC 1 cut(s) 323
BseXI GCAGC 3 cut(s) 13, 76, 104
BsgI GTGCAG 1 cut(s) 639
BshFI GGCC 2 cut(s) 154, 266
BsiHKCI CYCGRG 1 cut(s) 312
BsiSI CCGG 3 cut(s) 132, 141, 146
BslFI GGGAC 1 cut(s) 492
BslI CCNNNNNNNGG 2 cut(s) 349, 527
BsmAI GTCTC 2 cut(s) 519, 718
BsmFI GGGAC 1 cut(s) 492
BsnI GGCC 2 cut(s) 154, 266
BsoBI CYCGRG 1 cut(s) 312
Bsp1286I GDGCHC 1 cut(s) 323
Bsp143I GATC 1 cut(s) 498
BspACI CCGC 2 cut(s) 164, 495
BspANI GGCC 2 cut(s) 154, 266
BspCNI CTCAG 5 cut(s) 69, 317, 666, 726, 728
BspLI GGNNCC 1 cut(s) 387
BspMAI CTGCAG 1 cut(s) 94
BspMI ACCTGC 1 cut(s) 586
BspPI GGATC 1 cut(s) 506
BsrBI CCGCTC 1 cut(s) 166
BsrDI GCAATG 1 cut(s) 131
BsrFI RCCGGY 1 cut(s) 145
BsrI ACTGG 2 cut(s) 13, 185
BssAI RCCGGY 1 cut(s) 145
BssECI CCNNGG 2 cut(s) 347, 582
BssMI GATC 1 cut(s) 498
BssT1I CCWWGG 1 cut(s) 582
Bst2UI CCWGG 2 cut(s) 77, 348
Bst4CI ACNGT 1 cut(s) 115
Bst6I CTCTTC 1 cut(s) 63
BstC8I GCNNGC 2 cut(s) 264, 301
BstDEI CTNAG 6 cut(s) 56, 304, 588, 674, 715, 734
BstF5I GGATG 3 cut(s) 241, 517, 567
BstKTI GATC 1 cut(s) 501
BstMAI GTCTC 2 cut(s) 519, 718
BstMBI GATC 1 cut(s) 498
BstMWI GCNNNNNNNGC 2 cut(s) 656, 781
BstNI CCWGG 2 cut(s) 77, 348
BstNSI RCATGY 1 cut(s) 303
BstSCI CCNGG 3 cut(s) 75, 131, 346
BstSFI CTRYAG 1 cut(s) 90
BstSLI GKGCMC 1 cut(s) 323
BstV1I GCAGC 3 cut(s) 13, 76, 104
BstXI CCANNNNNNTGG 1 cut(s) 289
BsuRI GGCC 2 cut(s) 154, 266
BtsCI GGATG 3 cut(s) 241, 517, 567
BtsIMutI CAGTG 3 cut(s) 64, 671, 731
BveI ACCTGC 1 cut(s) 586
Cac8I GCNNGC 2 cut(s) 264, 301
Cfr10I RCCGGY 1 cut(s) 145
Cfr13I GGNCC 3 cut(s) 129, 143, 265
CpoI CGGWCCG 1 cut(s) 143
Csp6I GTAC 2 cut(s) 73, 214
CspI CGGWCCG 1 cut(s) 143
CviAII CATG 4 cut(s) 300, 361, 382, 475
CviQI GTAC 2 cut(s) 73, 214
DdeI CTNAG 6 cut(s) 56, 304, 588, 674, 715, 734
DpnI GATC 1 cut(s) 500
DpnII GATC 1 cut(s) 498
EaeI YGGCCR 1 cut(s) 152
Eam1104I CTCTTC 1 cut(s) 63
EarI CTCTTC 1 cut(s) 63
Eco130I CCWWGG 1 cut(s) 582
Eco47I GGWCC 2 cut(s) 129, 143
Eco57I CTGAAG 2 cut(s) 159, 770
Eco88I CYCGRG 1 cut(s) 312
EcoRII CCWGG 2 cut(s) 75, 346
EcoT14I CCWWGG 1 cut(s) 582
ErhI CCWWGG 1 cut(s) 582
FaeI CATG 4 cut(s) 303, 364, 385, 478
FaqI GGGAC 1 cut(s) 492
FatI CATG 4 cut(s) 299, 360, 381, 474
FauI CCCGC 1 cut(s) 488
FauNDI CATATG 1 cut(s) 697
Fnu4HI GCNGC 3 cut(s) 27, 90, 93
FokI GGATG 3 cut(s) 228, 504, 574
Fsp4HI GCNGC 3 cut(s) 27, 90, 93
FspBI CTAG 3 cut(s) 9, 452, 728
GluI GCNGC 3 cut(s) 27, 90, 93
HaeIII GGCC 2 cut(s) 154, 266
HapII CCGG 3 cut(s) 132, 141, 146
Hin1II CATG 4 cut(s) 303, 364, 385, 478
HinfI GANTC 1 cut(s) 308
HpaII CCGG 3 cut(s) 132, 141, 146
Hpy166II GTNNAC 2 cut(s) 575, 792
Hpy188I TCNGA 6 cut(s) 22, 178, 307, 705, 718, 802
Hpy188III TCNNGA 5 cut(s) 43, 220, 312, 502, 521
Hpy8I GTNNAC 2 cut(s) 575, 792
HpyAV CCTTC 4 cut(s) 58, 344, 367, 700
HpyCH4III ACNGT 1 cut(s) 115
HpyCH4V TGCA 5 cut(s) 92, 124, 299, 620, 650
HpyF10VI GCNNNNNNNGC 2 cut(s) 656, 781
HpyF3I CTNAG 6 cut(s) 56, 304, 588, 674, 715, 734
Hsp92II CATG 4 cut(s) 303, 364, 385, 478
Kzo9I GATC 1 cut(s) 498
LmnI GCTCC 3 cut(s) 259, 422, 781
Lsp1109I GCAGC 3 cut(s) 13, 76, 104
LweI GCATC 2 cut(s) 13, 111
MaeI CTAG 3 cut(s) 9, 452, 728
MaeIII GTNAC 1 cut(s) 669
MalI GATC 1 cut(s) 500
MbiI CCGCTC 1 cut(s) 166
MboI GATC 1 cut(s) 498
MboII GAAGA 5 cut(s) 80, 165, 458, 641, 813
MhlI GDGCHC 1 cut(s) 323
MlsI TGGCCA 1 cut(s) 154
MluCI AATT 4 cut(s) 195, 567, 664, 765
MluNI TGGCCA 1 cut(s) 154
MlyI GAGTC 1 cut(s) 302
MmeI TCCRAC 2 cut(s) 367, 400
MnlI CCTC 4 cut(s) 334, 498, 601, 729
Mox20I TGGCCA 1 cut(s) 154
MscI TGGCCA 1 cut(s) 154
MseI TTAA 2 cut(s) 189, 826
Msp20I TGGCCA 1 cut(s) 154
MspA1I CMGCKG 1 cut(s) 403
MspI CCGG 3 cut(s) 132, 141, 146
MspR9I CCNGG 3 cut(s) 77, 133, 348
MvaI CCWGG 2 cut(s) 77, 348
MwoI GCNNNNNNNGC 2 cut(s) 656, 781
NciI CCSGG 1 cut(s) 133
NdeI CATATG 1 cut(s) 697
NdeII GATC 1 cut(s) 498
NlaIII CATG 4 cut(s) 303, 364, 385, 478
NlaIV GGNNCC 1 cut(s) 387
NmuCI GTSAC 1 cut(s) 669
NspI RCATGY 1 cut(s) 303
PaeI GCATGC 1 cut(s) 303
PflFI GACNNNGTC 1 cut(s) 483
PflMI CCANNNNNTGG 1 cut(s) 527
PkrI GCNGC 3 cut(s) 28, 91, 94
PleI GAGTC 1 cut(s) 302
PpsI GAGTC 1 cut(s) 302
Psp6I CCWGG 2 cut(s) 75, 346
PspGI CCWGG 2 cut(s) 75, 346
PspN4I GGNNCC 1 cut(s) 387
PspPI GGNCC 3 cut(s) 129, 143, 265
PstI CTGCAG 1 cut(s) 94
PsyI GACNNNGTC 1 cut(s) 483
PvuII CAGCTG 1 cut(s) 403
RsaI GTAC 2 cut(s) 74, 215
RsaNI GTAC 2 cut(s) 73, 214
Rsr2I CGGWCCG 1 cut(s) 143
RsrII CGGWCCG 1 cut(s) 143
SaqAI TTAA 2 cut(s) 189, 826
SatI GCNGC 3 cut(s) 27, 90, 93
Sau3AI GATC 1 cut(s) 498
Sau96I GGNCC 3 cut(s) 129, 143, 265
ScaI AGTACT 1 cut(s) 215
SchI GAGTC 1 cut(s) 302
ScrFI CCNGG 3 cut(s) 77, 133, 348
SduI GDGCHC 1 cut(s) 323
SetI ASST 9 cut(s) 78, 264, 349, 405, 580, 594, 684, 777, 786
SfaNI GCATC 2 cut(s) 13, 111
SfcI CTRYAG 1 cut(s) 90
SinI GGWCC 2 cut(s) 129, 143
SphI GCATGC 1 cut(s) 303
Sse9I AATT 4 cut(s) 195, 567, 664, 765
SsiI CCGC 2 cut(s) 164, 495
SspI AATATT 1 cut(s) 466
SspMI CTAG 3 cut(s) 9, 452, 728
StyD4I CCNGG 3 cut(s) 75, 131, 346
StyI CCWWGG 1 cut(s) 582
TaaI ACNGT 1 cut(s) 115
TaqI TCGA 1 cut(s) 234
TasI AATT 4 cut(s) 195, 567, 664, 765
TatI WGTACW 1 cut(s) 213
Tru1I TTAA 2 cut(s) 189, 826
Tru9I TTAA 2 cut(s) 189, 826
TscAI CASTG 3 cut(s) 64, 678, 738
TseFI GTSAC 1 cut(s) 669
TseI GCWGC 3 cut(s) 26, 89, 92
Tsp45I GTSAC 1 cut(s) 669
TspDTI ATGAA 4 cut(s) 326, 349, 570, 578
TspRI CASTG 3 cut(s) 64, 678, 738
Tth111I GACNNNGTC 1 cut(s) 483
Van91I CCANNNNNTGG 1 cut(s) 527
VpaK11BI GGWCC 2 cut(s) 129, 143
XapI RAATTY 2 cut(s) 664, 765
XceI RCATGY 1 cut(s) 303
XspI CTAG 3 cut(s) 9, 452, 728
ZrmI AGTACT 1 cut(s) 215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.