Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0000548

Physical Location & Seq

Genomic Coordinates Forward (+)

68334134 .. 68335561

Gene Structure 1428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0556700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1167 bp

ATGTCTTTCCTATTACCACCCACTATTGCTCTGAAATCATCCCACTTCAACGCTTACGTGAACTATAGCGATGATTCAGCTGCTTCCGCGGCCTATGGCTTTCTCCAAGTCAACGGAGGGAATGTCTTCAGCCCGTTAGCAAAGTTCGAAGTCGTGACGGCCAATACTGGGACGGGACTAGTACATATAAGATGCTCACATAATAAAAAGTTCGTGCGATGGAGAACTCAGCAGTATGGGTACCTTTCTCCGGAGGCTGATGAACCAGAGGAGGACCAATCCATATGGTCGTGTACACTGTTTGAGCCTCAAGTAGCTGAAGATGGCAACCCCAAGAAAGTCCTGTTGTTCCATGTCGGATCAAAACAATATGCAAGAGCAATAAACGGAGGTGGAGTTACAGACATGAGAACAGAGGGCACTTGGAATCATCAGAGTACCTTTTATATCACTGACTTGGAGTCATTGGTGATATTGCCAAAGCATGTAGCTTTCAAAGCCCACAACGACCGTTACCTTCAGCATGCGGACAGTAATCAACTCAGGTTCATGTCCACCGATAAGGGGATTCCTGAGTCGTGGTTCGAAGTGGACACAGATGGCGATGGAAGGGCGAGAATCAAGGTGTTCAACAGCCTGAGCAACAACCACCTGAGGTTCGGCGGCGCATCCTTCGGCAACGCTATTTTTGCTGACGGGAACTCCAACGGCTTCCCGCCTCCCACTTTGTTTTTGCCAGTCAAGGTCGACAGTAGTACGGTCGCTCTCAAATGCTTAAGCAACAACAGATTTTGCACCCGACACACCGGTTCTATACAAGACGGTCTGAGCGCGAACGAAACTAGTACCAGCATTTCAAACTCGTCACGGTTCAGGCTGGAAGAGCTTGTTCTCTCTAGGAGAATCTACAATACCGATTTTGACCTTGCCAATGCCATAATCTACGGCGAGACCCCGGTCACCATGGCCACTGCAAACGCCAGCAACAACACCTCAGCAGACAACACTGTGGAATTCAAGTTCGCGTACACGGAGAGTAAGAGCAGCACATGGAGCTCCAGCCACTCGTGGATGGTAGGCGTGAGTGTCACCGTCAGCTTAAGAATTCCATTCGGACTCGGCGGTGTTGAAAATACATATTCCGGGGAGTATAACGGATCCTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002376 GO:0003674 GO:0003824 GO:0004089 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009814 GO:0009817 GO:0009941 GO:0009987 GO:0010033 GO:0010037 GO:0010119 GO:0010319 GO:0015979 GO:0016020 GO:0016829 GO:0016835 GO:0016836 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042221 GO:0042493 GO:0042651 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0048046 GO:0048519 GO:0048580 GO:0048581 GO:0050789 GO:0050793 GO:0050794 GO:0050832 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051704 GO:0051707 GO:0055035 GO:0065007 GO:0071944 GO:0072347 GO:0098542 GO:1901700 GO:2000026 GO:2000038 GO:2000122

KEGG Pathways

Metabolic & Signaling

ko00910 map00910

Pfam Domains

Protein Families

Pro_CA

Protein Analysis

388

Amino Acids

42.73

Weight (kDa)

6.0

Isoelectric Point (pI)

38.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Agglutinin	PF07468	5 - 132	7.3e-18	Agglutinin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000548)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01500 AT3G01500 AT3G01500 AT3G01500 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740
fragaria_vesca	FvH4_2g14190 FvH4_3g35690 FvH4_3g35690 FvH4_6g50780 FvH4_6g50780 FvH4_6g50780 FvH4_6g50780
malus_domestica	MD09G1032400.v1.1 MD10G1022000.v1.1 MD10G1022200.v1.1 MD10G1022400.v1.1 MD17G1034000.v1.1
prunus_persica	Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.6G080400_v2.0.a1 Prupe.8G025400_v2.0.a1
pyrus_communis	pycom10g01540 pycom111g02580 pycom17g03140
rosa_chinensis	RchiOBHm_Chr2g0172091 RchiOBHm_Chr2g0172171 RchiOBHm_Chr5g0063841 RchiOBHm_Chr5g0063851 RchiOBHm_Chr6g0276331
rosa_laevigata	RLG00000013403 RLG00000022084 RLG00000022089 RLG00000035683 RLG00000035684
rosa_multiflora	Rmu_co8246953.1_g000001 Rmu_sc0002765.1_g000009 Rmu_sc0002765.1_g000011 Rmu_sc0003665.1_g000009 Rmu_ssc0000252.1_g000041 Rmu_ssc0000252.1_g000047
rosa_roxburghii	Rroxscaffold_1G00016930 Rroxscaffold_2G00080110 Rroxscaffold_7G00192380
rosa_rugosa	Rorug02G0556500 Rorug02G0556600 Rorug02G0556700 Rorug02G0556800 Rorug05G0360800 Rorug06G0100000 Rorug06G0100000
rosa_samantha	Rh2AG632300 Rh2BG642200 Rh2BG645900 Rh2CG612500 Rh2DG653300 Rh2DG660500 Rh5AG418900 Rh5AG419000 Rh5BG435100 Rh5BG435200 Rh5CG458100 Rh5CG458200 Rh5DG447900 Rh5DG448000 Rh6AG211200 Rh6CG217900 Rh6DG208000
rosa_wichuraiana	Rw2G052340 Rw5G039370 Rw5G039380 Rw6G018450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	240
AccB1I	GGYRCC	1 cut(s)	240
AccI	GTMKAC	1 cut(s)	747
AccII	CGCG	3 cut(s)	89, 833, 1025
AccIII	TCCGGA	1 cut(s)	250
AciI	CCGC	6 cut(s)	87, 89, 527, 663, 716, 1122
AclWI	GGATC	3 cut(s)	367, 1152, 1165
AcoI	YGGCCR	2 cut(s)	159, 966
AcsI	RAATTY	2 cut(s)	1013, 1104
AcuI	CTGAAG	3 cut(s)	112, 339, 503
AfaI	GTAC	7 cut(s)	183, 242, 295, 439, 757, 847, 1028
AfiI	CCNNNNNNNGG	3 cut(s)	168, 250, 564
AflII	CTTAAG	2 cut(s)	775, 1099
AgeI	ACCGGT	1 cut(s)	806
AgsI	TTSAA	6 cut(s)	49, 496, 631, 858, 1018, 1130
AhdI	GACNNNNNGTC	1 cut(s)	460
AhlI	ACTAGT	2 cut(s)	178, 842
AloI	GAACNNNNNNTCC	2 cut(s)	1004, 1036
AluBI	AGCT	6 cut(s)	80, 317, 491, 886, 1056, 1098
AluI	AGCT	6 cut(s)	80, 317, 491, 886, 1056, 1098
Alw21I	GWGCWC	1 cut(s)	1058
Alw26I	GTCTC	1 cut(s)	944
AlwI	GGATC	3 cut(s)	367, 1152, 1165
Aor13HI	TCCGGA	1 cut(s)	250
AoxI	GGCC	3 cut(s)	90, 159, 966
ApeKI	GCWGC	2 cut(s)	80, 1044
ApoI	RAATTY	2 cut(s)	1013, 1104
AsiGI	ACCGGT	1 cut(s)	806
Asp700I	GAANNNNTTC	1 cut(s)	125
Asp718I	GGTACC	1 cut(s)	240
AspLEI	GCGC	2 cut(s)	668, 833
AspS9I	GGNCC	1 cut(s)	274
AsuC2I	CCSGG	2 cut(s)	956, 1144
AsuHPI	GGTGA	3 cut(s)	481, 952, 1081
AsuII	TTCGAA	2 cut(s)	147, 585
AvaII	GGWCC	1 cut(s)	274
AxyI	CCTNAGG	1 cut(s)	653
BaeGI	GKGCMC	1 cut(s)	422
BalI	TGGCCA	1 cut(s)	968
BamHI	GGATCC	1 cut(s)	1157
BanI	GGYRCC	1 cut(s)	240
BanII	GRGCYC	1 cut(s)	1058
BauI	CACGAG	1 cut(s)	1066
BbsI	GAAGAC	1 cut(s)	118
Bbv12I	GWGCWC	1 cut(s)	1058
BbvCI	CCTCAGC	1 cut(s)	994
BbvI	GCAGC	2 cut(s)	67, 1056
BccI	CCATC	5 cut(s)	213, 317, 593, 599, 1066
BceAI	ACGGC	3 cut(s)	174, 724, 961
BcnI	CCSGG	2 cut(s)	956, 1144
BcoDI	GTCTC	1 cut(s)	944
BcuI	ACTAGT	2 cut(s)	178, 842
BfaI	CTAG	3 cut(s)	179, 843, 897
BfmI	CTRYAG	1 cut(s)	64
BfrI	CTTAAG	2 cut(s)	775, 1099
BisI	GCNGC	4 cut(s)	81, 90, 664, 1045
BlsI	GCNGC	4 cut(s)	82, 91, 665, 1046
Bme1390I	CCNGG	2 cut(s)	956, 1144
Bme18I	GGWCC	1 cut(s)	274
BmeRI	GACNNNNNGTC	1 cut(s)	460
BmgT120I	GGNCC	1 cut(s)	274
BmiI	GGNNCC	2 cut(s)	242, 1159
BmrFI	CCNGG	2 cut(s)	956, 1144
BmrI	ACTGGG	1 cut(s)	177
BmsI	GCATC	2 cut(s)	182, 677
BmuI	ACTGGG	1 cut(s)	177
BoxI	GACNNNNGTC	1 cut(s)	956
BpiI	GAAGAC	1 cut(s)	118
BpmI	CTGGAG	1 cut(s)	1042
Bpu10I	CCTNAGC	2 cut(s)	638, 994
Bpu14I	TTCGAA	2 cut(s)	147, 585
BpuEI	CTTGAG	1 cut(s)	294
BpuMI	CCSGG	2 cut(s)	956, 1144
BsaAI	YACGTR	1 cut(s)	58
BsaI	GGTCTC	1 cut(s)	944
BsaJI	CCNNGG	4 cut(s)	87, 954, 963, 1143
BsaWI	WCCGGW	2 cut(s)	250, 806
BsaXI	ACNNNNNCTCC	6 cut(s)	108, 138, 381, 411, 686, 716
Bsc4I	CCNNNNNNNGG	3 cut(s)	168, 250, 564
Bse118I	RCCGGY	1 cut(s)	806
Bse1I	ACTGG	2 cut(s)	172, 737
Bse21I	CCTNAGG	1 cut(s)	653
BseAI	TCCGGA	1 cut(s)	250
BseDI	CCNNGG	4 cut(s)	87, 954, 963, 1143
BseGI	GGATG	3 cut(s)	38, 668, 1077
BseLI	CCNNNNNNNGG	3 cut(s)	168, 250, 564
BseMII	CTCAG	7 cut(s)	242, 556, 564, 629, 644, 818, 1008
BseNI	ACTGG	2 cut(s)	172, 737
BseRI	GAGGAG	1 cut(s)	284
BseSI	GKGCMC	1 cut(s)	422
BseXI	GCAGC	2 cut(s)	67, 1056
Bsh1236I	CGCG	3 cut(s)	89, 833, 1025
Bsh1285I	CGRYCG	2 cut(s)	511, 762
BshFI	GGCC	3 cut(s)	92, 161, 968
BshNI	GGYRCC	1 cut(s)	240
BshTI	ACCGGT	1 cut(s)	806
BsiEI	CGRYCG	2 cut(s)	511, 762
BsiHKAI	GWGCWC	1 cut(s)	1058
BsiSI	CCGG	4 cut(s)	251, 807, 956, 1143
BslFI	GGGAC	2 cut(s)	184, 189
BslI	CCNNNNNNNGG	3 cut(s)	168, 250, 564
BsmAI	GTCTC	1 cut(s)	944
BsmFI	GGGAC	2 cut(s)	184, 189
BsnI	GGCC	3 cut(s)	92, 161, 968
Bso31I	GGTCTC	1 cut(s)	944
Bsp119I	TTCGAA	2 cut(s)	147, 585
Bsp1286I	GDGCHC	2 cut(s)	422, 1058
Bsp13I	TCCGGA	1 cut(s)	250
Bsp1407I	TGTACA	1 cut(s)	293
Bsp143I	GATC	2 cut(s)	359, 1157
Bsp19I	CCATGG	1 cut(s)	963
BspACI	CCGC	6 cut(s)	87, 89, 527, 663, 716, 1122
BspANI	GGCC	3 cut(s)	92, 161, 968
BspCNI	CTCAG	7 cut(s)	241, 555, 565, 630, 645, 819, 1007
BspEI	TCCGGA	1 cut(s)	250
BspFNI	CGCG	3 cut(s)	89, 833, 1025
BspLI	GGNNCC	2 cut(s)	242, 1159
BspPI	GGATC	3 cut(s)	367, 1152, 1165
BspQI	GCTCTTC	1 cut(s)	876
BspT104I	TTCGAA	2 cut(s)	147, 585
BspT107I	GGYRCC	1 cut(s)	240
BspTI	CTTAAG	2 cut(s)	775, 1099
BspTNI	GGTCTC	1 cut(s)	944
BsrFI	RCCGGY	1 cut(s)	806
BsrGI	TGTACA	1 cut(s)	293
BsrI	ACTGG	2 cut(s)	172, 737
BssAI	RCCGGY	1 cut(s)	806
BssECI	CCNNGG	4 cut(s)	87, 954, 963, 1143
BssMI	GATC	2 cut(s)	359, 1157
BssSI	CACGAG	1 cut(s)	1066
BssT1I	CCWWGG	1 cut(s)	963
Bst2BI	CACGAG	1 cut(s)	1066
Bst4CI	ACNGT	9 cut(s)	300, 512, 533, 752, 760, 824, 870, 1009, 1093
Bst6I	CTCTTC	1 cut(s)	876
BstAFI	CTTAAG	2 cut(s)	775, 1099
BstAUI	TGTACA	1 cut(s)	293
BstBAI	YACGTR	1 cut(s)	58
BstBI	TTCGAA	2 cut(s)	147, 585
BstC8I	GCNNGC	2 cut(s)	525, 982
BstDEI	CTNAG	7 cut(s)	228, 542, 573, 638, 653, 827, 994
BstDSI	CCRYGG	2 cut(s)	87, 963
BstEII	GGTNACC	1 cut(s)	958
BstF5I	GGATG	3 cut(s)	38, 668, 1077
BstFNI	CGCG	3 cut(s)	89, 833, 1025
BstHHI	GCGC	2 cut(s)	668, 833
BstKTI	GATC	2 cut(s)	362, 1160
BstMAI	GTCTC	1 cut(s)	944
BstMBI	GATC	2 cut(s)	359, 1157
BstMCI	CGRYCG	2 cut(s)	511, 762
BstMWI	GCNNNNNNNGC	6 cut(s)	86, 89, 497, 689, 883, 1053
BstNSI	RCATGY	2 cut(s)	488, 527
BstPAI	GACNNNNGTC	1 cut(s)	956
BstPI	GGTNACC	1 cut(s)	958
BstSCI	CCNGG	2 cut(s)	954, 1142
BstSFI	CTRYAG	1 cut(s)	64
BstSLI	GKGCMC	1 cut(s)	422
BstUI	CGCG	3 cut(s)	89, 833, 1025
BstV1I	GCAGC	2 cut(s)	67, 1056
BstV2I	GAAGAC	1 cut(s)	118
BstX2I	RGATCY	1 cut(s)	1157
BstYI	RGATCY	1 cut(s)	1157
Bsu36I	CCTNAGG	1 cut(s)	653
BsuRI	GGCC	3 cut(s)	92, 161, 968
BtgI	CCRYGG	2 cut(s)	87, 963
BtgZI	GCGATG	3 cut(s)	84, 232, 618
BtsCI	GGATG	3 cut(s)	38, 668, 1077
BtsI	GCAGTG	1 cut(s)	969
BtsIMutI	CAGTG	4 cut(s)	296, 450, 969, 1005
Cac8I	GCNNGC	2 cut(s)	525, 982
CfoI	GCGC	2 cut(s)	668, 833
Cfr10I	RCCGGY	1 cut(s)	806
Cfr13I	GGNCC	1 cut(s)	274
Cfr42I	CCGCGG	1 cut(s)	90
Csp6I	GTAC	7 cut(s)	182, 241, 294, 438, 756, 846, 1027
CspAI	ACCGGT	1 cut(s)	806
CviAII	CATG	7 cut(s)	353, 406, 485, 524, 550, 964, 1050
CviQI	GTAC	7 cut(s)	182, 241, 294, 438, 756, 846, 1027
DdeI	CTNAG	7 cut(s)	228, 542, 573, 638, 653, 827, 994
DpnI	GATC	2 cut(s)	361, 1159
DpnII	GATC	2 cut(s)	359, 1157
DriI	GACNNNNNGTC	1 cut(s)	460
EaeI	YGGCCR	2 cut(s)	159, 966
Eam1104I	CTCTTC	1 cut(s)	876
Eam1105I	GACNNNNNGTC	1 cut(s)	460
EarI	CTCTTC	1 cut(s)	876
Ecl136II	GAGCTC	1 cut(s)	1056
Eco130I	CCWWGG	1 cut(s)	963
Eco24I	GRGCYC	1 cut(s)	1058
Eco31I	GGTCTC	1 cut(s)	944
Eco47I	GGWCC	1 cut(s)	274
Eco53kI	GAGCTC	1 cut(s)	1056
Eco57I	CTGAAG	3 cut(s)	112, 339, 503
Eco81I	CCTNAGG	1 cut(s)	653
Eco91I	GGTNACC	1 cut(s)	958
EcoICRI	GAGCTC	1 cut(s)	1056
EcoO65I	GGTNACC	1 cut(s)	958
EcoRI	GAATTC	2 cut(s)	1013, 1104
EcoT14I	CCWWGG	1 cut(s)	963
EcoT38I	GRGCYC	1 cut(s)	1058
ErhI	CCWWGG	1 cut(s)	963
FaeI	CATG	7 cut(s)	356, 409, 488, 527, 553, 967, 1053
FaqI	GGGAC	2 cut(s)	184, 189
FatI	CATG	7 cut(s)	352, 405, 484, 523, 549, 963, 1049
FauI	CCCGC	1 cut(s)	723
FauNDI	CATATG	1 cut(s)	284
FblI	GTMKAC	1 cut(s)	747
Fnu4HI	GCNGC	4 cut(s)	81, 90, 664, 1045
FokI	GGATG	3 cut(s)	25, 655, 1084
FriOI	GRGCYC	1 cut(s)	1058
Fsp4HI	GCNGC	4 cut(s)	81, 90, 664, 1045
FspBI	CTAG	3 cut(s)	179, 843, 897
GlaI	GCGC	2 cut(s)	667, 832
GluI	GCNGC	4 cut(s)	81, 90, 664, 1045
GsuI	CTGGAG	1 cut(s)	1042
HaeIII	GGCC	3 cut(s)	92, 161, 968
HapII	CCGG	4 cut(s)	251, 807, 956, 1143
HhaI	GCGC	2 cut(s)	668, 833
Hin1II	CATG	7 cut(s)	356, 409, 488, 527, 553, 967, 1053
Hin6I	GCGC	2 cut(s)	666, 831
HinP1I	GCGC	2 cut(s)	666, 831
HincII	GTYRAC	2 cut(s)	112, 748
HindII	GTYRAC	2 cut(s)	112, 748
HinfI	GANTC	8 cut(s)	74, 427, 461, 568, 575, 618, 903, 1116
HpaII	CCGG	4 cut(s)	251, 807, 956, 1143
HphI	GGTGA	3 cut(s)	481, 952, 1081
Hpy166II	GTNNAC	8 cut(s)	61, 112, 294, 296, 555, 592, 748, 1029
Hpy188I	TCNGA	5 cut(s)	33, 359, 435, 828, 1115
Hpy188III	TCNNGA	3 cut(s)	154, 251, 572
Hpy8I	GTNNAC	8 cut(s)	61, 112, 294, 296, 555, 592, 748, 1029
HpyAV	CCTTC	3 cut(s)	527, 603, 682
HpyCH4III	ACNGT	9 cut(s)	300, 512, 533, 752, 760, 824, 870, 1009, 1093
HpyCH4IV	ACGT	1 cut(s)	57
HpyCH4V	TGCA	3 cut(s)	374, 795, 974
HpyF10VI	GCNNNNNNNGC	6 cut(s)	86, 89, 497, 689, 883, 1053
HpyF3I	CTNAG	7 cut(s)	228, 542, 573, 638, 653, 827, 994
HpySE526I	ACGT	1 cut(s)	57
Hsp92II	CATG	7 cut(s)	356, 409, 488, 527, 553, 967, 1053
HspAI	GCGC	2 cut(s)	666, 831
Kpn2I	TCCGGA	1 cut(s)	250
KpnI	GGTACC	1 cut(s)	244
KspI	CCGCGG	1 cut(s)	90
Kzo9I	GATC	2 cut(s)	359, 1157
LguI	GCTCTTC	1 cut(s)	876
LmnI	GCTCC	2 cut(s)	1053, 1061
Lsp1109I	GCAGC	2 cut(s)	67, 1056
LweI	GCATC	2 cut(s)	182, 677
MaeI	CTAG	3 cut(s)	179, 843, 897
MaeII	ACGT	1 cut(s)	57
MaeIII	GTNAC	6 cut(s)	154, 397, 512, 864, 958, 1087
MalI	GATC	2 cut(s)	361, 1159
MboI	GATC	2 cut(s)	359, 1157
MboII	GAAGA	3 cut(s)	118, 332, 893
MflI	RGATCY	1 cut(s)	1157
MhlI	GDGCHC	2 cut(s)	422, 1058
MlsI	TGGCCA	1 cut(s)	968
MluCI	AATT	2 cut(s)	1013, 1104
MluNI	TGGCCA	1 cut(s)	968
MlyI	GAGTC	3 cut(s)	470, 584, 1110
MmeI	TCCRAC	2 cut(s)	337, 729
Mox20I	TGGCCA	1 cut(s)	968
MroI	TCCGGA	1 cut(s)	250
MroXI	GAANNNNTTC	1 cut(s)	125
MscI	TGGCCA	1 cut(s)	968
MseI	TTAA	3 cut(s)	776, 1100, 1165
Msp20I	TGGCCA	1 cut(s)	968
MspA1I	CMGCKG	2 cut(s)	80, 89
MspCI	CTTAAG	2 cut(s)	775, 1099
MspI	CCGG	4 cut(s)	251, 807, 956, 1143
MspR9I	CCNGG	2 cut(s)	956, 1144
MvnI	CGCG	3 cut(s)	89, 833, 1025
MwoI	GCNNNNNNNGC	6 cut(s)	86, 89, 497, 689, 883, 1053
NciI	CCSGG	2 cut(s)	956, 1144
NcoI	CCATGG	1 cut(s)	963
NdeI	CATATG	1 cut(s)	284
NdeII	GATC	2 cut(s)	359, 1157
NlaIII	CATG	7 cut(s)	356, 409, 488, 527, 553, 967, 1053
NlaIV	GGNNCC	2 cut(s)	242, 1159
NmeAIII	GCCGAG	1 cut(s)	1098
NmuCI	GTSAC	4 cut(s)	154, 864, 958, 1087
NspI	RCATGY	2 cut(s)	488, 527
NspV	TTCGAA	2 cut(s)	147, 585
PaeI	GCATGC	1 cut(s)	527
PciSI	GCTCTTC	1 cut(s)	876
PdmI	GAANNNNTTC	1 cut(s)	125
PfeI	GAWTC	5 cut(s)	74, 427, 568, 618, 903
PinAI	ACCGGT	1 cut(s)	806
PkrI	GCNGC	4 cut(s)	82, 91, 665, 1046
PleI	GAGTC	3 cut(s)	469, 583, 1110
PpsI	GAGTC	3 cut(s)	469, 583, 1110
Ppu21I	YACGTR	1 cut(s)	58
PshAI	GACNNNNGTC	1 cut(s)	956
Psp124BI	GAGCTC	1 cut(s)	1058
PspEI	GGTNACC	1 cut(s)	958
PspN4I	GGNNCC	2 cut(s)	242, 1159
PspPI	GGNCC	1 cut(s)	274
PsuI	RGATCY	1 cut(s)	1157
PvuII	CAGCTG	1 cut(s)	80
RsaI	GTAC	7 cut(s)	183, 242, 295, 439, 757, 847, 1028
RsaNI	GTAC	7 cut(s)	182, 241, 294, 438, 756, 846, 1027
SacI	GAGCTC	1 cut(s)	1058
SacII	CCGCGG	1 cut(s)	90
SalI	GTCGAC	1 cut(s)	746
SapI	GCTCTTC	1 cut(s)	876
SaqAI	TTAA	3 cut(s)	776, 1100, 1165
SatI	GCNGC	4 cut(s)	81, 90, 664, 1045
Sau3AI	GATC	2 cut(s)	359, 1157
Sau96I	GGNCC	1 cut(s)	274
SchI	GAGTC	3 cut(s)	470, 584, 1110
ScrFI	CCNGG	2 cut(s)	956, 1144
SduI	GDGCHC	2 cut(s)	422, 1058
SfaNI	GCATC	2 cut(s)	182, 677
SfcI	CTRYAG	1 cut(s)	64
Sfr303I	CCGCGG	1 cut(s)	90
SfuI	TTCGAA	2 cut(s)	147, 585
SgrBI	CCGCGG	1 cut(s)	90
SinI	GGWCC	1 cut(s)	274
SmlI	CTYRAG	3 cut(s)	309, 775, 1099
SmoI	CTYRAG	3 cut(s)	309, 775, 1099
SpeI	ACTAGT	2 cut(s)	178, 842
SphI	GCATGC	1 cut(s)	527
Sse9I	AATT	2 cut(s)	1013, 1104
SsiI	CCGC	6 cut(s)	87, 89, 527, 663, 716, 1122
SspMI	CTAG	3 cut(s)	179, 843, 897
SstI	GAGCTC	1 cut(s)	1058
StyD4I	CCNGG	2 cut(s)	954, 1142
StyI	CCWWGG	1 cut(s)	963
TaaI	ACNGT	9 cut(s)	300, 512, 533, 752, 760, 824, 870, 1009, 1093
TaiI	ACGT	1 cut(s)	60
TaqI	TCGA	3 cut(s)	147, 585, 747
TasI	AATT	2 cut(s)	1013, 1104
TatI	WGTACW	2 cut(s)	181, 293
TauI	GCSGC	2 cut(s)	92, 666
TfiI	GAWTC	5 cut(s)	74, 427, 568, 618, 903
Tru1I	TTAA	3 cut(s)	776, 1100, 1165
Tru9I	TTAA	3 cut(s)	776, 1100, 1165
TscAI	CASTG	4 cut(s)	303, 457, 976, 1012
TseFI	GTSAC	4 cut(s)	154, 864, 958, 1087
TseI	GCWGC	2 cut(s)	80, 1044
Tsp45I	GTSAC	4 cut(s)	154, 864, 958, 1087
TspDTI	ATGAA	2 cut(s)	276, 538
TspGWI	ACGGA	3 cut(s)	129, 402, 1046
TspRI	CASTG	4 cut(s)	303, 457, 976, 1012
Vha464I	CTTAAG	2 cut(s)	775, 1099
VpaK11BI	GGWCC	1 cut(s)	274
XapI	RAATTY	2 cut(s)	1013, 1104
XceI	RCATGY	2 cut(s)	488, 527
XmiI	GTMKAC	1 cut(s)	747
XmnI	GAANNNNTTC	1 cut(s)	125
XspI	CTAG	3 cut(s)	179, 843, 897

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.