RLG00000022084

Reversible hydration of carbon dioxide

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
80780744 .. 80782665
1922 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022084

Sequence Viewer

Length: 807 bp
ATGGGGAAGAACTACGAGGAGGCCATTGCAGCACTTCAGAAACTACTCAGTAAGAAGGGTGACCTGAAAACAGTTGCAGCTTCGAAAGTGGAGCAGATTACTGCTCAGTTGGCAACAGCCGACGACGGCACCAAACCCTTTGATCCCGTGGAGAGAATCAAAAGCGGTTTCATTCACTTCAAGAAAGAGAAATATGACACAAACCCAGCGCTATATGGTGAACTTGCCAAAGGTCAAGCCCCCAAGTTTATGTTGTTTGCATGCTCGGATTCCCGGGTTTGCCCATCCCACACTTTGGATATGCAGCCTGGTGAGGCTTTTGTGGTCCGTAATGTTGCAAATATGGTCCCTCCATTTGATAAGGTCAGTTACGCCGGAGGTGGGTCGGCCATTGAGTATGCTGTCTTGCATCTGAAGGTTTCATACATTGTGGTGATCGGGCACAGCGCTTGTGGTGGAATTAAGGGACTCCTGTCTTTTCCAGATGATGGACCAACTTCCACTGACTTCATAGAAGTCTGGGTCAAAATTGGCCAAGCTGCCAAGAACAAGGTGAAGGCACTACATGAAGGTGCTTCCTTCCCTGAACTATGCACTCACTGTGAAAAGGAGGCTGTGAACGTTTCCATTGGAAATCTGCTGAGCTATCCTTTTGTAAGAGACGGGTTGGTGAACAAGACCCTCGGATTAAAGGGGGGCTACTATGATTTTGTCAAAGGAAACTTTGAGTTGTGGGATGTTGATTTTGGCCTTTCTCCCGACTTCTCCGTCAAAGATGTGGCTACGGTACTGCACTGGAAGCTGTAG

Protein Analysis

269

Amino Acids

29.14

Weight (kDa)

6.66

Isoelectric Point (pI)

28.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pro_CA PF00484 84 - 241 2.7e-39 Carbonic anhydrase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000548)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G01500 AT3G01500 AT3G01500 AT3G01500 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740
fragaria_vesca FvH4_2g14190 FvH4_3g35690 FvH4_3g35690 FvH4_6g50780 FvH4_6g50780 FvH4_6g50780 FvH4_6g50780
malus_domestica MD09G1032400.v1.1 MD10G1022000.v1.1 MD10G1022200.v1.1 MD10G1022400.v1.1 MD17G1034000.v1.1
prunus_persica Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.6G080400_v2.0.a1 Prupe.8G025400_v2.0.a1
pyrus_communis pycom10g01540 pycom111g02580 pycom17g03140
rosa_chinensis RchiOBHm_Chr2g0172091 RchiOBHm_Chr2g0172171 RchiOBHm_Chr5g0063841 RchiOBHm_Chr5g0063851 RchiOBHm_Chr6g0276331
rosa_laevigata RLG00000013403 RLG00000022084 RLG00000022089 RLG00000035683 RLG00000035684
rosa_multiflora Rmu_co8246953.1_g000001 Rmu_sc0002765.1_g000009 Rmu_sc0002765.1_g000011 Rmu_sc0003665.1_g000009 Rmu_ssc0000252.1_g000041 Rmu_ssc0000252.1_g000047
rosa_roxburghii Rroxscaffold_1G00016930 Rroxscaffold_2G00080110 Rroxscaffold_7G00192380
rosa_rugosa Rorug02G0556500 Rorug02G0556600 Rorug02G0556700 Rorug02G0556800 Rorug05G0360800 Rorug06G0100000 Rorug06G0100000
rosa_samantha Rh2AG632300 Rh2BG642200 Rh2BG645900 Rh2CG612500 Rh2DG653300 Rh2DG660500 Rh5AG418900 Rh5AG419000 Rh5BG435100 Rh5BG435200 Rh5CG458100 Rh5CG458200 Rh5DG447900 Rh5DG448000 Rh6AG211200 Rh6CG217900 Rh6DG208000
rosa_wichuraiana Rw2G052340 Rw5G039370 Rw5G039380 Rw6G018450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 767
AccB1I GGYRCC 1 cut(s) 128
AccB7I CCANNNNNTGG 2 cut(s) 295, 488
AciI CCGC 1 cut(s) 165
AclI AACGTT 1 cut(s) 621
AclWI GGATC 1 cut(s) 137
AcoI YGGCCR 2 cut(s) 387, 532
AcuI CTGAAG 2 cut(s) 20, 434
AfaI GTAC 1 cut(s) 789
AfeI AGCGCT 2 cut(s) 210, 448
AfiI CCNNNNNNNGG 3 cut(s) 295, 381, 488
AgsI TTSAA 1 cut(s) 181
AjnI CCWGG 1 cut(s) 307
AluBI AGCT 4 cut(s) 80, 539, 645, 802
AluI AGCT 4 cut(s) 80, 539, 645, 802
Alw26I GTCTC 1 cut(s) 654
AlwI GGATC 1 cut(s) 137
Ama87I CYCGRG 1 cut(s) 273
Aor51HI AGCGCT 2 cut(s) 210, 448
AoxI GGCC 4 cut(s) 21, 387, 532, 748
ApeKI GCWGC 4 cut(s) 29, 77, 304, 539
AspLEI GCGC 2 cut(s) 211, 449
AspS9I GGNCC 3 cut(s) 325, 346, 491
AsuC2I CCSGG 2 cut(s) 274, 275
AsuHPI GGTGA 6 cut(s) 71, 230, 323, 445, 565, 682
AsuII TTCGAA 1 cut(s) 83
AvaI CYCGRG 1 cut(s) 273
AvaII GGWCC 3 cut(s) 325, 346, 491
BaeGI GKGCMC 1 cut(s) 444
BalI TGGCCA 1 cut(s) 534
BanI GGYRCC 1 cut(s) 128
BarI GAAGNNNNNNTAC 2 cut(s) 407, 439
BbvI GCAGC 4 cut(s) 41, 89, 316, 526
BccI CCATC 2 cut(s) 292, 482
BceAI ACGGC 1 cut(s) 142
BciT130I CCWGG 1 cut(s) 309
BcnI CCSGG 2 cut(s) 274, 275
BcoDI GTCTC 1 cut(s) 654
BfmI CTRYAG 1 cut(s) 803
BfoI RGCGCY 2 cut(s) 212, 450
BisI GCNGC 4 cut(s) 30, 78, 305, 540
BlpI GCTNAGC 1 cut(s) 641
BlsI GCNGC 4 cut(s) 31, 79, 306, 541
Bme1390I CCNGG 3 cut(s) 274, 275, 309
Bme18I GGWCC 3 cut(s) 325, 346, 491
BmeT110I CYCGRG 1 cut(s) 273
BmgT120I GGNCC 3 cut(s) 325, 346, 491
BmiI GGNNCC 2 cut(s) 130, 348
BmrFI CCNGG 3 cut(s) 274, 275, 309
BmsI GCATC 1 cut(s) 418
BoxI GACNNNNGTC 1 cut(s) 472
Bpu1102I GCTNAGC 1 cut(s) 641
Bpu14I TTCGAA 1 cut(s) 83
BpuMI CCSGG 2 cut(s) 274, 275
BsaJI CCNNGG 3 cut(s) 147, 273, 682
Bsc4I CCNNNNNNNGG 3 cut(s) 295, 381, 488
Bse1I ACTGG 1 cut(s) 800
Bse3DI GCAATG 1 cut(s) 24
BseBI CCWGG 1 cut(s) 309
BseDI CCNNGG 3 cut(s) 147, 273, 682
BseGI GGATG 2 cut(s) 284, 742
BseLI CCNNNNNNNGG 3 cut(s) 295, 381, 488
BseMI GCAATG 1 cut(s) 24
BseMII CTCAG 3 cut(s) 61, 119, 632
BseNI ACTGG 1 cut(s) 800
BseRI GAGGAG 1 cut(s) 32
BseSI GKGCMC 1 cut(s) 444
BseXI GCAGC 4 cut(s) 41, 89, 316, 526
BseYI CCCAGC 1 cut(s) 205
BsgI GTGCAG 1 cut(s) 776
BshFI GGCC 4 cut(s) 23, 389, 534, 750
BshNI GGYRCC 1 cut(s) 128
BsiHKCI CYCGRG 1 cut(s) 273
BsiSI CCGG 2 cut(s) 274, 375
BslFI GGGAC 2 cut(s) 332, 480
BslI CCNNNNNNNGG 3 cut(s) 295, 381, 488
BsmAI GTCTC 1 cut(s) 654
BsmBI CGTCTC 1 cut(s) 654
BsmFI GGGAC 2 cut(s) 332, 480
BsnI GGCC 4 cut(s) 23, 389, 534, 750
BsoBI CYCGRG 1 cut(s) 273
Bsp119I TTCGAA 1 cut(s) 83
Bsp1286I GDGCHC 1 cut(s) 444
Bsp143I GATC 2 cut(s) 142, 435
Bsp1720I GCTNAGC 1 cut(s) 641
BspACI CCGC 1 cut(s) 165
BspANI GGCC 4 cut(s) 23, 389, 534, 750
BspCNI CTCAG 3 cut(s) 60, 118, 633
BspLI GGNNCC 2 cut(s) 130, 348
BspPI GGATC 1 cut(s) 137
BspT104I TTCGAA 1 cut(s) 83
BspT107I GGYRCC 1 cut(s) 128
BsrDI GCAATG 1 cut(s) 24
BsrI ACTGG 1 cut(s) 800
BssECI CCNNGG 3 cut(s) 147, 273, 682
BssMI GATC 2 cut(s) 142, 435
Bst2UI CCWGG 1 cut(s) 309
Bst4CI ACNGT 3 cut(s) 73, 602, 787
BstBI TTCGAA 1 cut(s) 83
BstC8I GCNNGC 1 cut(s) 262
BstDEI CTNAG 3 cut(s) 47, 105, 641
BstDSI CCRYGG 1 cut(s) 147
BstEII GGTNACC 1 cut(s) 59
BstF5I GGATG 2 cut(s) 284, 742
BstH2I RGCGCY 2 cut(s) 212, 450
BstHHI GCGC 2 cut(s) 211, 449
BstKTI GATC 2 cut(s) 145, 438
BstMAI GTCTC 1 cut(s) 654
BstMBI GATC 2 cut(s) 142, 435
BstMWI GCNNNNNNNGC 3 cut(s) 29, 110, 799
BstNI CCWGG 1 cut(s) 309
BstNSI RCATGY 1 cut(s) 264
BstPAI GACNNNNGTC 1 cut(s) 472
BstPI GGTNACC 1 cut(s) 59
BstSCI CCNGG 3 cut(s) 272, 273, 307
BstSFI CTRYAG 1 cut(s) 803
BstSLI GKGCMC 1 cut(s) 444
BstV1I GCAGC 4 cut(s) 41, 89, 316, 526
BsuRI GGCC 4 cut(s) 23, 389, 534, 750
BtgI CCRYGG 1 cut(s) 147
BtsCI GGATG 2 cut(s) 284, 742
BtsIMutI CAGTG 3 cut(s) 501, 598, 793
Cac8I GCNNGC 1 cut(s) 262
CfoI GCGC 2 cut(s) 211, 449
Cfr13I GGNCC 3 cut(s) 325, 346, 491
Cfr9I CCCGGG 1 cut(s) 273
Csp6I GTAC 1 cut(s) 788
CviAII CATG 2 cut(s) 261, 566
CviQI GTAC 1 cut(s) 788
DdeI CTNAG 3 cut(s) 47, 105, 641
DpnI GATC 2 cut(s) 144, 437
DpnII GATC 2 cut(s) 142, 435
DrdI GACNNNNNNGTC 1 cut(s) 767
DseDI GACNNNNNNGTC 1 cut(s) 767
EaeI YGGCCR 2 cut(s) 387, 532
Eco47I GGWCC 3 cut(s) 325, 346, 491
Eco47III AGCGCT 2 cut(s) 210, 448
Eco57I CTGAAG 2 cut(s) 20, 434
Eco88I CYCGRG 1 cut(s) 273
Eco91I GGTNACC 1 cut(s) 59
EcoO65I GGTNACC 1 cut(s) 59
EcoRII CCWGG 1 cut(s) 307
Esp3I CGTCTC 1 cut(s) 654
FaeI CATG 2 cut(s) 264, 569
FaqI GGGAC 2 cut(s) 332, 480
FatI CATG 2 cut(s) 260, 565
Fnu4HI GCNGC 4 cut(s) 30, 78, 305, 540
FokI GGATG 2 cut(s) 271, 749
Fsp4HI GCNGC 4 cut(s) 30, 78, 305, 540
GlaI GCGC 2 cut(s) 210, 448
GluI GCNGC 4 cut(s) 30, 78, 305, 540
GsaI CCCAGC 1 cut(s) 209
HaeII RGCGCY 2 cut(s) 212, 450
HaeIII GGCC 4 cut(s) 23, 389, 534, 750
HapII CCGG 2 cut(s) 274, 375
HhaI GCGC 2 cut(s) 211, 449
Hin1II CATG 2 cut(s) 264, 569
Hin6I GCGC 2 cut(s) 209, 447
HinP1I GCGC 2 cut(s) 209, 447
HinfI GANTC 3 cut(s) 156, 269, 468
HpaII CCGG 2 cut(s) 274, 375
HphI GGTGA 6 cut(s) 71, 230, 323, 445, 565, 682
Hpy166II GTNNAC 3 cut(s) 221, 619, 673
Hpy188I TCNGA 4 cut(s) 39, 268, 414, 686
Hpy188III TCNNGA 3 cut(s) 181, 482, 758
Hpy8I GTNNAC 3 cut(s) 221, 619, 673
Hpy99I CGWCG 2 cut(s) 125, 128
HpyAV CCTTC 5 cut(s) 49, 409, 550, 563, 589
HpyCH4III ACNGT 3 cut(s) 73, 602, 787
HpyCH4IV ACGT 1 cut(s) 621
HpyCH4V TGCA 8 cut(s) 29, 77, 260, 304, 338, 409, 594, 793
HpyF10VI GCNNNNNNNGC 3 cut(s) 29, 110, 799
HpyF3I CTNAG 3 cut(s) 47, 105, 641
HpySE526I ACGT 1 cut(s) 621
Hsp92II CATG 2 cut(s) 264, 569
HspAI GCGC 2 cut(s) 209, 447
Kzo9I GATC 2 cut(s) 142, 435
LmnI GCTCC 1 cut(s) 91
Lsp1109I GCAGC 4 cut(s) 41, 89, 316, 526
LweI GCATC 1 cut(s) 418
MaeII ACGT 1 cut(s) 621
MaeIII GTNAC 2 cut(s) 59, 368
MalI GATC 2 cut(s) 144, 437
MboI GATC 2 cut(s) 142, 435
MboII GAAGA 1 cut(s) 19
MhlI GDGCHC 1 cut(s) 444
MlsI TGGCCA 1 cut(s) 534
MluCI AATT 2 cut(s) 459, 528
MluNI TGGCCA 1 cut(s) 534
MlyI GAGTC 1 cut(s) 462
MnlI CCTC 7 cut(s) 10, 13, 307, 360, 371, 604, 692
Mox20I TGGCCA 1 cut(s) 534
MscI TGGCCA 1 cut(s) 534
MseI TTAA 2 cut(s) 462, 689
MslI CAYNNNNRTG 2 cut(s) 431, 570
Msp20I TGGCCA 1 cut(s) 534
MspI CCGG 2 cut(s) 274, 375
MspR9I CCNGG 3 cut(s) 274, 275, 309
MvaI CCWGG 1 cut(s) 309
MwoI GCNNNNNNNGC 3 cut(s) 29, 110, 799
NciI CCSGG 2 cut(s) 274, 275
NdeII GATC 2 cut(s) 142, 435
NlaIII CATG 2 cut(s) 264, 569
NlaIV GGNNCC 2 cut(s) 130, 348
NmuCI GTSAC 1 cut(s) 59
NspI RCATGY 1 cut(s) 264
NspV TTCGAA 1 cut(s) 83
PaeI GCATGC 1 cut(s) 264
PfeI GAWTC 2 cut(s) 156, 269
PflMI CCANNNNNTGG 2 cut(s) 295, 488
PkrI GCNGC 4 cut(s) 31, 79, 306, 541
PleI GAGTC 1 cut(s) 462
PpsI GAGTC 1 cut(s) 462
PshAI GACNNNNGTC 1 cut(s) 472
Psp1406I AACGTT 1 cut(s) 621
Psp6I CCWGG 1 cut(s) 307
PspEI GGTNACC 1 cut(s) 59
PspFI CCCAGC 1 cut(s) 205
PspGI CCWGG 1 cut(s) 307
PspN4I GGNNCC 2 cut(s) 130, 348
PspPI GGNCC 3 cut(s) 325, 346, 491
RsaI GTAC 1 cut(s) 789
RsaNI GTAC 1 cut(s) 788
RseI CAYNNNNRTG 2 cut(s) 431, 570
SaqAI TTAA 2 cut(s) 462, 689
SatI GCNGC 4 cut(s) 30, 78, 305, 540
Sau3AI GATC 2 cut(s) 142, 435
Sau96I GGNCC 3 cut(s) 325, 346, 491
SchI GAGTC 1 cut(s) 462
ScrFI CCNGG 3 cut(s) 274, 275, 309
SduI GDGCHC 1 cut(s) 444
SfaNI GCATC 1 cut(s) 418
SfcI CTRYAG 1 cut(s) 803
SfuI TTCGAA 1 cut(s) 83
SinI GGWCC 3 cut(s) 325, 346, 491
SmaI CCCGGG 1 cut(s) 275
SmiMI CAYNNNNRTG 2 cut(s) 431, 570
SphI GCATGC 1 cut(s) 264
Sse9I AATT 2 cut(s) 459, 528
SsiI CCGC 1 cut(s) 165
StyD4I CCNGG 3 cut(s) 272, 273, 307
TaaI ACNGT 3 cut(s) 73, 602, 787
TaiI ACGT 1 cut(s) 624
TaqI TCGA 1 cut(s) 83
TasI AATT 2 cut(s) 459, 528
TfiI GAWTC 2 cut(s) 156, 269
Tru1I TTAA 2 cut(s) 462, 689
Tru9I TTAA 2 cut(s) 462, 689
TscAI CASTG 3 cut(s) 508, 605, 800
TseFI GTSAC 1 cut(s) 59
TseI GCWGC 4 cut(s) 29, 77, 304, 539
Tsp45I GTSAC 1 cut(s) 59
TspDTI ATGAA 4 cut(s) 160, 411, 499, 582
TspGWI ACGGA 2 cut(s) 317, 757
TspMI CCCGGG 1 cut(s) 273
TspRI CASTG 3 cut(s) 508, 605, 800
Van91I CCANNNNNTGG 2 cut(s) 295, 488
VpaK11BI GGWCC 3 cut(s) 325, 346, 491
XceI RCATGY 1 cut(s) 264
XmaI CCCGGG 1 cut(s) 273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.