pycom10g01540

Reversible hydration of carbon dioxide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0000548
Physical Location & Seq
Reverse (-)
1593807 .. 1595382
1576 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g01540.3

Sequence Viewer

Length: 681 bp
ATGGCTGAGTTGCAAAGACCTGCTAATGGTCATTTCGACCCAGTTCGAAGGATTGTAGATGGCTTCATCAACTTCAGGGTCAACAAATTCGAAAAATACCCAGATTACTACAAGGAGCTTGCCAATGGACAAAGCCCCAAGTTTCTGGTATTTGCATGCTCGGACTCCCGAGTGAGCCCCTCACATATCCTTAGTTTCCAACCTGGGGAGGCCTTCATGGCTCGCAACATTGCAAACATGGTTCCTGCATTCAATCAGCTGAAATACGCAGGAGTTGGAGCAGTTATAGAATATGCTATTACACAACTCCTGGTGACAAATATTTTGGTAATTGGACACAGTCGTTGTGGTGGGATACAGAGGCTTATGAGTCACCCTGAGGATAATCGTGTTCCCTTTGACTTCATAGATGAATGGGTCAAAATTGGTTTACCCGCCAAGGCTAAGGTTATAGCAAATGGACAAGGTGGCACCACTTTTGAGGAACAATGTGAGGATTGTGCAAGGGAAGCAGTAAATTTGTCGCTGATAAACCTACAAACTTACCCTTACGTTCAAAAGGCGCTTGCGGAGAAAAACCTAGCGCTCAGGGGTGGTTACTATGACTTTGTTCATGGGGTTTTGGAGCTATGGGACGTTGAGTCGCACATTTCACCTCCCATCATCGTACCAGCACCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00910 map00910
Pfam Domains
Protein Families
Pro_CA

Protein Analysis

227

Amino Acids

25.24

Weight (kDa)

6.07

Isoelectric Point (pI)

59.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000548)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G01500 AT3G01500 AT3G01500 AT3G01500 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740 AT5G14740
fragaria_vesca FvH4_2g14190 FvH4_3g35690 FvH4_3g35690 FvH4_6g50780 FvH4_6g50780 FvH4_6g50780 FvH4_6g50780
malus_domestica MD09G1032400.v1.1 MD10G1022000.v1.1 MD10G1022200.v1.1 MD10G1022400.v1.1 MD17G1034000.v1.1
prunus_persica Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.3G285600_v2.0.a1 Prupe.6G080400_v2.0.a1 Prupe.8G025400_v2.0.a1
pyrus_communis pycom10g01540 pycom111g02580 pycom17g03140
rosa_chinensis RchiOBHm_Chr2g0172091 RchiOBHm_Chr2g0172171 RchiOBHm_Chr5g0063841 RchiOBHm_Chr5g0063851 RchiOBHm_Chr6g0276331
rosa_laevigata RLG00000013403 RLG00000022084 RLG00000022089 RLG00000035683 RLG00000035684
rosa_multiflora Rmu_co8246953.1_g000001 Rmu_sc0002765.1_g000009 Rmu_sc0002765.1_g000011 Rmu_sc0003665.1_g000009 Rmu_ssc0000252.1_g000041 Rmu_ssc0000252.1_g000047
rosa_roxburghii Rroxscaffold_1G00016930 Rroxscaffold_2G00080110 Rroxscaffold_7G00192380
rosa_rugosa Rorug02G0556500 Rorug02G0556600 Rorug02G0556700 Rorug02G0556800 Rorug05G0360800 Rorug06G0100000 Rorug06G0100000
rosa_samantha Rh2AG632300 Rh2BG642200 Rh2BG645900 Rh2CG612500 Rh2DG653300 Rh2DG660500 Rh5AG418900 Rh5AG419000 Rh5BG435100 Rh5BG435200 Rh5CG458100 Rh5CG458200 Rh5DG447900 Rh5DG448000 Rh6AG211200 Rh6CG217900 Rh6DG208000
rosa_wichuraiana Rw2G052340 Rw5G039370 Rw5G039380 Rw6G018450

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 28
AccB1I GGYRCC 1 cut(s) 470
AciI CCGC 2 cut(s) 435, 569
AcsI RAATTY 2 cut(s) 86, 517
AcuI CTGAAG 1 cut(s) 58
AfaI GTAC 1 cut(s) 669
AfeI AGCGCT 1 cut(s) 585
AfiI CCNNNNNNNGG 2 cut(s) 26, 205
AgsI TTSAA 2 cut(s) 253, 557
AhdI GACNNNNNGTC 1 cut(s) 640
AjnI CCWGG 2 cut(s) 202, 309
AluBI AGCT 3 cut(s) 118, 259, 628
AluI AGCT 3 cut(s) 118, 259, 628
Ama87I CYCGRG 1 cut(s) 168
Aor51HI AGCGCT 1 cut(s) 585
AoxI GGCC 1 cut(s) 210
ApoI RAATTY 2 cut(s) 86, 517
ArsI GACNNNNNNTTYG 2 cut(s) 307, 339
AspLEI GCGC 2 cut(s) 565, 586
AsuHPI GGTGA 3 cut(s) 325, 365, 645
AsuII TTCGAA 2 cut(s) 46, 90
AvaI CYCGRG 1 cut(s) 168
AxyI CCTNAGG 1 cut(s) 378
BanI GGYRCC 1 cut(s) 470
BanII GRGCYC 1 cut(s) 179
BccI CCATC 2 cut(s) 53, 668
BciT130I CCWGG 2 cut(s) 204, 311
BciVI GTATCC 1 cut(s) 348
BfaI CTAG 1 cut(s) 581
BfoI RGCGCY 2 cut(s) 566, 587
BfuAI ACCTGC 1 cut(s) 28
BfuI GTATCC 1 cut(s) 348
BglI GCCNNNNNGGC 1 cut(s) 218
Bme1390I CCNGG 2 cut(s) 204, 311
BmeRI GACNNNNNGTC 1 cut(s) 640
BmeT110I CYCGRG 1 cut(s) 168
BmiI GGNNCC 2 cut(s) 243, 472
BmrFI CCNGG 2 cut(s) 204, 311
BmrI ACTGGG 1 cut(s) 35
BmuI ACTGGG 1 cut(s) 35
Bpu10I CCTNAGC 2 cut(s) 444, 587
Bpu14I TTCGAA 2 cut(s) 46, 90
BsaJI CCNNGG 2 cut(s) 203, 438
Bsc4I CCNNNNNNNGG 2 cut(s) 26, 205
Bse1I ACTGG 1 cut(s) 41
Bse21I CCTNAGG 1 cut(s) 378
Bse3DI GCAATG 1 cut(s) 228
BseBI CCWGG 2 cut(s) 204, 311
BseDI CCNNGG 2 cut(s) 203, 438
BseLI CCNNNNNNNGG 2 cut(s) 26, 205
BseMI GCAATG 1 cut(s) 228
BseMII CTCAG 2 cut(s) 369, 601
BseNI ACTGG 1 cut(s) 41
BshFI GGCC 1 cut(s) 212
BshNI GGYRCC 1 cut(s) 470
BsiHKCI CYCGRG 1 cut(s) 168
BslFI GGGAC 1 cut(s) 647
BslI CCNNNNNNNGG 2 cut(s) 26, 205
BsmFI GGGAC 1 cut(s) 647
BsmI GAATGC 1 cut(s) 248
BsnI GGCC 1 cut(s) 212
BsoBI CYCGRG 1 cut(s) 168
Bsp119I TTCGAA 2 cut(s) 46, 90
Bsp1286I GDGCHC 1 cut(s) 179
BspACI CCGC 2 cut(s) 435, 569
BspANI GGCC 1 cut(s) 212
BspCNI CTCAG 2 cut(s) 370, 600
BspLI GGNNCC 2 cut(s) 243, 472
BspMI ACCTGC 1 cut(s) 28
BspT104I TTCGAA 2 cut(s) 46, 90
BspT107I GGYRCC 1 cut(s) 470
BsrDI GCAATG 1 cut(s) 228
BsrI ACTGG 1 cut(s) 41
BssECI CCNNGG 2 cut(s) 203, 438
BssT1I CCWWGG 1 cut(s) 438
Bst2UI CCWGG 2 cut(s) 204, 311
Bst4CI ACNGT 1 cut(s) 341
BstBI TTCGAA 2 cut(s) 46, 90
BstC8I GCNNGC 4 cut(s) 120, 157, 223, 567
BstDEI CTNAG 5 cut(s) 6, 191, 378, 444, 587
BstH2I RGCGCY 2 cut(s) 566, 587
BstHHI GCGC 2 cut(s) 565, 586
BstMWI GCNNNNNNNGC 2 cut(s) 218, 509
BstNI CCWGG 2 cut(s) 204, 311
BstNSI RCATGY 1 cut(s) 159
BstSCI CCNGG 2 cut(s) 202, 309
BstXI CCANNNNNNTGG 1 cut(s) 145
Bsu36I CCTNAGG 1 cut(s) 378
BsuI GTATCC 1 cut(s) 348
BsuRI GGCC 1 cut(s) 212
BveI ACCTGC 1 cut(s) 28
Cac8I GCNNGC 4 cut(s) 120, 157, 223, 567
CfoI GCGC 2 cut(s) 565, 586
Csp6I GTAC 1 cut(s) 668
CviAII CATG 4 cut(s) 156, 217, 238, 614
CviQI GTAC 1 cut(s) 668
DdeI CTNAG 5 cut(s) 6, 191, 378, 444, 587
DriI GACNNNNNGTC 1 cut(s) 640
Eam1105I GACNNNNNGTC 1 cut(s) 640
Eco130I CCWWGG 1 cut(s) 438
Eco147I AGGCCT 1 cut(s) 212
Eco24I GRGCYC 1 cut(s) 179
Eco47III AGCGCT 1 cut(s) 585
Eco57I CTGAAG 1 cut(s) 58
Eco81I CCTNAGG 1 cut(s) 378
Eco88I CYCGRG 1 cut(s) 168
EcoRII CCWGG 2 cut(s) 202, 309
EcoT14I CCWWGG 1 cut(s) 438
EcoT38I GRGCYC 1 cut(s) 179
ErhI CCWWGG 1 cut(s) 438
FaeI CATG 4 cut(s) 159, 220, 241, 617
FaqI GGGAC 1 cut(s) 647
FatI CATG 4 cut(s) 155, 216, 237, 613
FauI CCCGC 1 cut(s) 442
FriOI GRGCYC 1 cut(s) 179
FspBI CTAG 1 cut(s) 581
GlaI GCGC 2 cut(s) 564, 585
HaeII RGCGCY 2 cut(s) 566, 587
HaeIII GGCC 1 cut(s) 212
HhaI GCGC 2 cut(s) 565, 586
Hin1II CATG 4 cut(s) 159, 220, 241, 617
Hin6I GCGC 2 cut(s) 563, 584
HinP1I GCGC 2 cut(s) 563, 584
HincII GTYRAC 1 cut(s) 82
HindII GTYRAC 1 cut(s) 82
HinfI GANTC 3 cut(s) 164, 370, 641
HphI GGTGA 3 cut(s) 325, 365, 645
Hpy166II GTNNAC 2 cut(s) 82, 431
Hpy188I TCNGA 1 cut(s) 163
Hpy188III TCNNGA 1 cut(s) 168
Hpy8I GTNNAC 2 cut(s) 82, 431
HpyAV CCTTC 2 cut(s) 42, 223
HpyCH4III ACNGT 1 cut(s) 341
HpyCH4IV ACGT 2 cut(s) 552, 636
HpyCH4V TGCA 5 cut(s) 13, 155, 233, 248, 503
HpyF10VI GCNNNNNNNGC 2 cut(s) 218, 509
HpyF3I CTNAG 5 cut(s) 6, 191, 378, 444, 587
HpySE526I ACGT 2 cut(s) 552, 636
Hsp92II CATG 4 cut(s) 159, 220, 241, 617
HspAI GCGC 2 cut(s) 563, 584
LmnI GCTCC 3 cut(s) 115, 278, 625
MaeI CTAG 1 cut(s) 581
MaeII ACGT 2 cut(s) 552, 636
MaeIII GTNAC 3 cut(s) 313, 371, 596
MhlI GDGCHC 1 cut(s) 179
MluCI AATT 4 cut(s) 86, 330, 423, 517
MlyI GAGTC 3 cut(s) 158, 379, 650
MmeI TCCRAC 2 cut(s) 223, 256
MnlI CCTC 7 cut(s) 190, 202, 354, 373, 475, 487, 666
MseI TTAA 1 cut(s) 679
MspA1I CMGCKG 1 cut(s) 259
MspR9I CCNGG 2 cut(s) 204, 311
Mva1269I GAATGC 1 cut(s) 248
MvaI CCWGG 2 cut(s) 204, 311
MwoI GCNNNNNNNGC 2 cut(s) 218, 509
NlaIII CATG 4 cut(s) 159, 220, 241, 617
NlaIV GGNNCC 2 cut(s) 243, 472
NmuCI GTSAC 2 cut(s) 313, 371
NspI RCATGY 1 cut(s) 159
NspV TTCGAA 2 cut(s) 46, 90
PaeI GCATGC 1 cut(s) 159
PceI AGGCCT 1 cut(s) 212
PctI GAATGC 1 cut(s) 248
PflFI GACNNNGTC 1 cut(s) 339
PleI GAGTC 3 cut(s) 158, 378, 649
PpsI GAGTC 3 cut(s) 158, 378, 649
Psp6I CCWGG 2 cut(s) 202, 309
PspGI CCWGG 2 cut(s) 202, 309
PspN4I GGNNCC 2 cut(s) 243, 472
PsyI GACNNNGTC 1 cut(s) 339
PvuII CAGCTG 1 cut(s) 259
RsaI GTAC 1 cut(s) 669
RsaNI GTAC 1 cut(s) 668
SaqAI TTAA 1 cut(s) 679
SchI GAGTC 3 cut(s) 158, 379, 650
ScrFI CCNGG 2 cut(s) 204, 311
SduI GDGCHC 1 cut(s) 179
SfuI TTCGAA 2 cut(s) 46, 90
SphI GCATGC 1 cut(s) 159
Sse9I AATT 4 cut(s) 86, 330, 423, 517
SseBI AGGCCT 1 cut(s) 212
SsiI CCGC 2 cut(s) 435, 569
SspI AATATT 1 cut(s) 322
SspMI CTAG 1 cut(s) 581
StuI AGGCCT 1 cut(s) 212
StyD4I CCNGG 2 cut(s) 202, 309
StyI CCWWGG 1 cut(s) 438
TaaI ACNGT 1 cut(s) 341
TaiI ACGT 2 cut(s) 555, 639
TaqI TCGA 3 cut(s) 36, 46, 90
TasI AATT 4 cut(s) 86, 330, 423, 517
Tru1I TTAA 1 cut(s) 679
Tru9I TTAA 1 cut(s) 679
TseFI GTSAC 2 cut(s) 313, 371
Tsp45I GTSAC 2 cut(s) 313, 371
TspDTI ATGAA 5 cut(s) 55, 205, 394, 426, 602
Tth111I GACNNNGTC 1 cut(s) 339
XapI RAATTY 2 cut(s) 86, 517
XceI RCATGY 1 cut(s) 159
XspI CTAG 1 cut(s) 581
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.