FvH4_2g04841
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
3765882 .. 3769463
3582 bp
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UTR
Exon/CDS
Intron
FvH4_2g04841.t1

Sequence Viewer

Length: 423 bp
ATGGCAGCAAAAGGTGAGGCTGCAGCTATTGGCATTGATCTGGGAACAACTTATTCATGTGTTGGCGTTTGGCAACATGATCGGATTGAGATCATAGCCAATGATCAAGGAAACAGAACGACACCGTCCTATGTTGCTTTTACTGATACCGGGTGGTTGATCGGTGATGCTGCAAAGAATCAAGTCACCAGCAATCCAATCAACACCGTTTTTGGTGTGGTTCCAGCAATTGGCATCGATCTCGGAACAACTTATTCATGCGTTGGCGTTTGGCAACATGATCAGATTGAGATCATAGCCAATGATCAAGGAAACAGAACGACTCCGTCCTATGTTGCTTTTACGGATAACGGGCGGTTGATCGGTGATGGTGCGAAGAATCAAGTCACCAGCAATCCAATCAACACTGTTTTTGGTATGTGA
Functional Annotation

Protein Analysis

141

Amino Acids

14.85

Weight (kDa)

4.51

Isoelectric Point (pI)

15.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 9 - 73 4.5e-26 Hsp70 protein
HSP70 PF00012 76 - 139 1e-26 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 230
AciI CCGC 1 cut(s) 355
AfiI CCNNNNNNNGG 1 cut(s) 230
AluBI AGCT 1 cut(s) 26
AluI AGCT 1 cut(s) 26
ApeKI GCWGC 4 cut(s) 5, 20, 23, 170
AsuC2I CCSGG 1 cut(s) 151
AsuHPI GGTGA 5 cut(s) 26, 176, 178, 377, 379
BbvI GCAGC 4 cut(s) 7, 17, 35, 157
BccI CCATC 1 cut(s) 362
BcgI CGANNNNNNTGC 4 cut(s) 62, 96, 223, 257
BclI TGATCA 3 cut(s) 103, 280, 304
BcnI CCSGG 1 cut(s) 151
BfmI CTRYAG 1 cut(s) 21
BisI GCNGC 4 cut(s) 6, 21, 24, 171
BlsI GCNGC 4 cut(s) 7, 22, 25, 172
Bme1390I CCNGG 1 cut(s) 151
BmiI GGNNCC 1 cut(s) 222
BmrFI CCNGG 1 cut(s) 151
BmsI GCATC 2 cut(s) 157, 243
BpuMI CCSGG 1 cut(s) 151
Bsa29I ATCGAT 1 cut(s) 237
BsaBI GATNNNNATC 2 cut(s) 89, 290
Bsc4I CCNNNNNNNGG 1 cut(s) 230
Bse8I GATNNNNATC 2 cut(s) 89, 290
BseCI ATCGAT 1 cut(s) 237
BseJI GATNNNNATC 2 cut(s) 89, 290
BseLI CCNNNNNNNGG 1 cut(s) 230
BseXI GCAGC 4 cut(s) 7, 17, 35, 157
BshVI ATCGAT 1 cut(s) 237
BsiSI CCGG 1 cut(s) 150
BslI CCNNNNNNNGG 1 cut(s) 230
BspACI CCGC 1 cut(s) 355
BspDI ATCGAT 1 cut(s) 237
BspLI GGNNCC 1 cut(s) 222
BspMAI CTGCAG 1 cut(s) 25
Bst4CI ACNGT 3 cut(s) 126, 208, 409
BstSCI CCNGG 1 cut(s) 149
BstSFI CTRYAG 1 cut(s) 21
BstV1I GCAGC 4 cut(s) 7, 17, 35, 157
Bsu15I ATCGAT 1 cut(s) 237
BsuTUI ATCGAT 1 cut(s) 237
BtsIMutI CAGTG 1 cut(s) 405
ClaI ATCGAT 1 cut(s) 237
CviAII CATG 4 cut(s) 57, 77, 258, 278
CviJI RGCY 4 cut(s) 20, 26, 98, 299
CviKI_1 RGCY 4 cut(s) 20, 26, 98, 299
FaeI CATG 4 cut(s) 60, 80, 261, 281
FaiI YATR 9 cut(s) 58, 78, 95, 132, 259, 279, 296, 333, 419
FatI CATG 4 cut(s) 56, 76, 257, 277
FbaI TGATCA 3 cut(s) 103, 280, 304
Fnu4HI GCNGC 4 cut(s) 6, 21, 24, 171
Fsp4HI GCNGC 4 cut(s) 6, 21, 24, 171
GluI GCNGC 4 cut(s) 6, 21, 24, 171
HapII CCGG 1 cut(s) 150
Hin1II CATG 4 cut(s) 60, 80, 261, 281
HinfI GANTC 3 cut(s) 178, 322, 379
HpaII CCGG 1 cut(s) 150
HphI GGTGA 5 cut(s) 26, 176, 178, 377, 379
Hpy188I TCNGA 3 cut(s) 84, 245, 285
HpyCH4III ACNGT 3 cut(s) 126, 208, 409
HpyCH4V TGCA 2 cut(s) 23, 173
Hsp92II CATG 4 cut(s) 60, 80, 261, 281
Ksp22I TGATCA 3 cut(s) 103, 280, 304
LpnPI CCDG 5 cut(s) 26, 163, 202, 237, 403
Lsp1109I GCAGC 4 cut(s) 7, 17, 35, 157
LweI GCATC 2 cut(s) 157, 243
MaeIII GTNAC 2 cut(s) 184, 385
MboII GAAGA 1 cut(s) 388
MfeI CAATTG 1 cut(s) 228
MluCI AATT 1 cut(s) 228
MlyI GAGTC 1 cut(s) 316
MnlI CCTC 1 cut(s) 10
MspI CCGG 1 cut(s) 150
MspR9I CCNGG 1 cut(s) 151
MunI CAATTG 1 cut(s) 228
NciI CCSGG 1 cut(s) 151
NlaIII CATG 4 cut(s) 60, 80, 261, 281
NlaIV GGNNCC 1 cut(s) 222
NmuCI GTSAC 2 cut(s) 184, 385
PfeI GAWTC 2 cut(s) 178, 379
PflFI GACNNNGTC 2 cut(s) 124, 325
PflMI CCANNNNNTGG 1 cut(s) 230
PkrI GCNGC 4 cut(s) 7, 22, 25, 172
PleI GAGTC 1 cut(s) 316
PpsI GAGTC 1 cut(s) 316
PspN4I GGNNCC 1 cut(s) 222
PstI CTGCAG 1 cut(s) 25
PsyI GACNNNGTC 2 cut(s) 124, 325
SatI GCNGC 4 cut(s) 6, 21, 24, 171
SchI GAGTC 1 cut(s) 316
ScrFI CCNGG 1 cut(s) 151
SetI ASST 2 cut(s) 16, 28
SfaNI GCATC 2 cut(s) 157, 243
SfcI CTRYAG 1 cut(s) 21
Sse9I AATT 1 cut(s) 228
SsiI CCGC 1 cut(s) 355
StyD4I CCNGG 1 cut(s) 149
TaaI ACNGT 3 cut(s) 126, 208, 409
TaqI TCGA 1 cut(s) 237
TasI AATT 1 cut(s) 228
TfiI GAWTC 2 cut(s) 178, 379
TscAI CASTG 1 cut(s) 412
TseFI GTSAC 2 cut(s) 184, 385
TseI GCWGC 4 cut(s) 5, 20, 23, 170
Tsp45I GTSAC 2 cut(s) 184, 385
TspDTI ATGAA 2 cut(s) 45, 246
TspGWI ACGGA 2 cut(s) 315, 359
TspRI CASTG 1 cut(s) 412
Tth111I GACNNNGTC 2 cut(s) 124, 325
Van91I CCANNNNNTGG 1 cut(s) 230
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.