Rh6BG014700
HSP70 Family

Belongs to the heat shock protein 70 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0001841
Physical Location & Seq
Reverse (-)
2108414 .. 2109375
962 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG014700.1

Sequence Viewer

Length: 393 bp
ATGGCGGGTCATGCCATAGGGATCGACTTGGGGACAACCTACTCGTGCGTAGCAGTGTGGCAGCAAGATCGTGTTGAGATTATAGTGAACGATCAAGGCAACAGAACCACTCCATCTTATGTTGCCTTCACTGATACTAAGCGATTGGTAGGAGATGCAGCACTTAACCAGATCATCAAAAACCCCACCAATACAGTCTTTGATGCAAAGCGATTGATAGGTAGAAGATTTAGTGACGCATCTGTTCAAAGTGATTTGAAGCTTTGGCCATTCAAGGTCATCGAAGGTCCTAATGACAAGCCCCTTATTGTTGTGAAAGACAAGGGCCAAGAGAAACACTTCGCTGCTGAAGAAATATCATCCATGGACCATGGTACTCACAAAGATGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169
Pfam Domains
Protein Families
HSP70

Protein Analysis

130

Amino Acids

14.38

Weight (kDa)

6.4

Isoelectric Point (pI)

30.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 5 - 122 1.3e-44 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 5
AclWI GGATC 1 cut(s) 29
AcoI YGGCCR 1 cut(s) 266
AcuI CTGAAG 1 cut(s) 369
AfaI GTAC 1 cut(s) 376
AgsI TTSAA 3 cut(s) 248, 259, 274
AluBI AGCT 1 cut(s) 262
AluI AGCT 1 cut(s) 262
AlwI GGATC 1 cut(s) 29
AoxI GGCC 2 cut(s) 266, 325
ApeKI GCWGC 3 cut(s) 61, 158, 344
Asp700I GAANNNNTTC 1 cut(s) 338
AspS9I GGNCC 3 cut(s) 287, 325, 367
AvaII GGWCC 2 cut(s) 287, 367
BalI TGGCCA 1 cut(s) 268
BauI CACGAG 1 cut(s) 43
BbvI GCAGC 3 cut(s) 73, 170, 331
BccI CCATC 1 cut(s) 121
BcgI CGANNNNNNTGC 2 cut(s) 50, 84
BisI GCNGC 3 cut(s) 62, 159, 345
BlsI GCNGC 3 cut(s) 63, 160, 346
Bme18I GGWCC 2 cut(s) 287, 367
BmgT120I GGNCC 3 cut(s) 287, 325, 367
BmsI GCATC 4 cut(s) 145, 193, 248, 376
BsaJI CCNNGG 2 cut(s) 363, 370
BseDI CCNNGG 2 cut(s) 363, 370
BseGI GGATG 1 cut(s) 359
BseXI GCAGC 3 cut(s) 73, 170, 331
BshFI GGCC 2 cut(s) 268, 327
BslFI GGGAC 1 cut(s) 46
BsmFI GGGAC 1 cut(s) 46
BsnI GGCC 2 cut(s) 268, 327
Bsp143I GATC 4 cut(s) 21, 67, 91, 171
Bsp19I CCATGG 2 cut(s) 363, 370
BspACI CCGC 1 cut(s) 5
BspANI GGCC 2 cut(s) 268, 327
BspPI GGATC 1 cut(s) 29
BssECI CCNNGG 2 cut(s) 363, 370
BssMI GATC 4 cut(s) 21, 67, 91, 171
BssSI CACGAG 1 cut(s) 43
BssT1I CCWWGG 2 cut(s) 363, 370
Bst2BI CACGAG 1 cut(s) 43
Bst4CI ACNGT 1 cut(s) 196
BstDEI CTNAG 1 cut(s) 138
BstDSI CCRYGG 2 cut(s) 363, 370
BstF5I GGATG 1 cut(s) 359
BstKTI GATC 4 cut(s) 24, 70, 94, 174
BstMBI GATC 4 cut(s) 21, 67, 91, 171
BstMWI GCNNNNNNNGC 1 cut(s) 11
BstV1I GCAGC 3 cut(s) 73, 170, 331
BsuRI GGCC 2 cut(s) 268, 327
BtgI CCRYGG 2 cut(s) 363, 370
BtsCI GGATG 1 cut(s) 359
BtsI GCAGTG 1 cut(s) 60
BtsIMutI CAGTG 2 cut(s) 60, 129
Cfr13I GGNCC 3 cut(s) 287, 325, 367
CseI GACGC 1 cut(s) 245
Csp6I GTAC 1 cut(s) 375
CviAII CATG 3 cut(s) 11, 364, 371
CviJI RGCY 4 cut(s) 262, 268, 301, 327
CviKI_1 RGCY 4 cut(s) 262, 268, 301, 327
CviQI GTAC 1 cut(s) 375
DdeI CTNAG 1 cut(s) 138
DpnI GATC 4 cut(s) 23, 69, 93, 173
DpnII GATC 4 cut(s) 21, 67, 91, 171
EaeI YGGCCR 1 cut(s) 266
Eco130I CCWWGG 2 cut(s) 363, 370
Eco47I GGWCC 2 cut(s) 287, 367
Eco57I CTGAAG 1 cut(s) 369
EcoO109I RGGNCCY 1 cut(s) 287
EcoT14I CCWWGG 2 cut(s) 363, 370
EcoT22I ATGCAT 1 cut(s) 391
ErhI CCWWGG 2 cut(s) 363, 370
FaeI CATG 3 cut(s) 14, 367, 374
FaiI YATR 7 cut(s) 12, 17, 83, 120, 365, 372, 391
FaqI GGGAC 1 cut(s) 46
FatI CATG 3 cut(s) 10, 363, 370
Fnu4HI GCNGC 3 cut(s) 62, 159, 345
FokI GGATG 1 cut(s) 346
Fsp4HI GCNGC 3 cut(s) 62, 159, 345
GluI GCNGC 3 cut(s) 62, 159, 345
HaeIII GGCC 2 cut(s) 268, 327
HgaI GACGC 1 cut(s) 245
Hin1II CATG 3 cut(s) 14, 367, 374
HindIII AAGCTT 1 cut(s) 260
Hpy166II GTNNAC 1 cut(s) 88
Hpy8I GTNNAC 1 cut(s) 88
HpyAV CCTTC 2 cut(s) 136, 278
HpyCH4III ACNGT 1 cut(s) 196
HpyCH4V TGCA 3 cut(s) 158, 206, 389
HpyF10VI GCNNNNNNNGC 1 cut(s) 11
HpyF3I CTNAG 1 cut(s) 138
Hsp92II CATG 3 cut(s) 14, 367, 374
Kzo9I GATC 4 cut(s) 21, 67, 91, 171
LpnPI CCDG 1 cut(s) 182
Lsp1109I GCAGC 3 cut(s) 73, 170, 331
LweI GCATC 4 cut(s) 145, 193, 248, 376
MaeIII GTNAC 1 cut(s) 233
MalI GATC 4 cut(s) 23, 69, 93, 173
MboI GATC 4 cut(s) 21, 67, 91, 171
MboII GAAGA 2 cut(s) 237, 362
MlsI TGGCCA 1 cut(s) 268
MluNI TGGCCA 1 cut(s) 268
Mox20I TGGCCA 1 cut(s) 268
Mph1103I ATGCAT 1 cut(s) 391
MroXI GAANNNNTTC 1 cut(s) 338
MscI TGGCCA 1 cut(s) 268
MseI TTAA 1 cut(s) 165
MslI CAYNNNNRTG 1 cut(s) 384
Msp20I TGGCCA 1 cut(s) 268
MwoI GCNNNNNNNGC 1 cut(s) 11
NcoI CCATGG 2 cut(s) 363, 370
NdeII GATC 4 cut(s) 21, 67, 91, 171
NlaIII CATG 3 cut(s) 14, 367, 374
NmuCI GTSAC 1 cut(s) 233
NsiI ATGCAT 1 cut(s) 391
PdmI GAANNNNTTC 1 cut(s) 338
PkrI GCNGC 3 cut(s) 63, 160, 346
PpuMI RGGWCCY 1 cut(s) 287
Psp5II RGGWCCY 1 cut(s) 287
PspPI GGNCC 3 cut(s) 287, 325, 367
PspPPI RGGWCCY 1 cut(s) 287
RsaI GTAC 1 cut(s) 376
RsaNI GTAC 1 cut(s) 375
RseI CAYNNNNRTG 1 cut(s) 384
SaqAI TTAA 1 cut(s) 165
SatI GCNGC 3 cut(s) 62, 159, 345
Sau3AI GATC 4 cut(s) 21, 67, 91, 171
Sau96I GGNCC 3 cut(s) 287, 325, 367
SetI ASST 5 cut(s) 41, 223, 264, 279, 289
SfaNI GCATC 4 cut(s) 145, 193, 248, 376
SinI GGWCC 2 cut(s) 287, 367
SmiMI CAYNNNNRTG 1 cut(s) 384
SsiI CCGC 1 cut(s) 5
StyI CCWWGG 2 cut(s) 363, 370
TaaI ACNGT 1 cut(s) 196
TaqI TCGA 2 cut(s) 24, 282
Tru1I TTAA 1 cut(s) 165
Tru9I TTAA 1 cut(s) 165
TscAI CASTG 2 cut(s) 60, 136
TseFI GTSAC 1 cut(s) 233
TseI GCWGC 3 cut(s) 61, 158, 344
Tsp45I GTSAC 1 cut(s) 233
TspRI CASTG 2 cut(s) 60, 136
VpaK11BI GGWCC 2 cut(s) 287, 367
XmnI GAANNNNTTC 1 cut(s) 338
Zsp2I ATGCAT 1 cut(s) 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.